Pregenerated sensors for OLFR834 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095525Ensembl transcript IDs: ENSMUST00000086492.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | ATTTCCACCTTTGTGCAGAATGACAAATGCAGTGCCATCAAAGTGTaGAGCAGTGCATCTAGGATACTTATCAAGAAGGACAACAAAACC | + |
Preference number: 5 (lower is better) Translates to: ISTFVQNDKCSAIKV*SSASRILIKKDNKT Trigger: GGTTTTGTTGTCCTTCTTGATAAGTATCCTAGATGCACTGCTCCACACTTTGATGGCACTGCATTTGTCATTCTGCACAAAGGTGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086492.2 |
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CDS CCA 72 bp | TTTGTGCAGAATGACAAATGCAGTGCCATCAAAGTGTaGAGCAGTGCATCTAGGATACTTATCAAGAAGGAC | + |
Preference number: 6 (lower is better) Translates to: FVQNDKCSAIKV*SSASRILIKKD Trigger: GTCCTTCTTGATAAGTATCCTAGATGCACTGCTCCACACTTTGATGGCACTGCATTTGTCATTCTGCACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086492.2 |
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CDS CCA 72 bp | GGCTGTAGTTCTTGGTTATCTGATAATCCCATGAGATaGAATTCTGTAGATTCTGAAACGTTTCCTCGCTTC | + |
Preference number: 6 (lower is better) Translates to: GCSSWLSDNPMR*NSVDSETFPRF Trigger: GAAGCGAGGAAACGTTTCAGAATCTACAGAATTCCATCTCATGGGATTATCAGATAACCAAGAACTACAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086492.2 |
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CDS CCA 72 bp | GACAGGAAGACTCCAAAAAGAACAGGCTGTAGTTCTTaGTTATCTGATAATCCCATGAGATGGAATTCTGTA | + |
Preference number: 6 (lower is better) Translates to: DRKTPKRTGCSS*LSDNPMRWNSV Trigger: TACAGAATTCCATCTCATGGGATTATCAGATAACCAAGAACTACAGCCTGTTCTTTTTGGAGTCTTCCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086492.2 |