Pregenerated sensors for OLFR832 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095957Ensembl transcript IDs: ENSMUST00000060601.5, ENSMUST00000218385.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGTTACTCAGTTTGTTGTGTGTTTCTCAGGGATGCAGCAAATTTTaGGCAATCTCTGCTCTTCTAAATAATGCCTCACCCATTCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: LLLSLLCVSQGCSKF*AISALLNNASPILL Trigger: CAAGAGAATGGGTGAGGCATTATTTAGAAGAGCAGAGATTGCTCAAAATTTGCTGCATCCCTGAGAAACACACAACAAACTGAGTAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR TCA 90 bp | AACCTGCATAGGGGAAAAAGAGAATTAATTCCCTTAAGTCATATCTaGCCTCATCATGTGCCCTATAGAATGTGTGCACATCCTCACAAT | + |
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Preference number: 1 (lower is better) Translates to: NLHRGKRELIPLSHI*PHHVPYRMCAHPHN Trigger: ATTGTGAGGATGTGCACACATTCTATAGGGCACATGATGAGGTCAGATATGACTTAAGGGAATTAATTCTCTTTTTCCCCTATGCAGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR TCA 90 bp | TTTCTGGATGGAAGACAAACCAATAATACACTTTTCTCGGAGTACTaGACCAAAGTAAATCTATGTCTCTGCTGTCTTTGTATATCCCCT | + |
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Preference number: 1 (lower is better) Translates to: FLDGRQTNNTLFSEY*TKVNLCLCCLCISP Trigger: AGGGGATATACAAAGACAGCAGAGACATAGATTTACTTTGGTTCAGTACTCCGAGAAAAGTGTATTATTGGTTTGTCTTCCATCCAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR CCA 90 bp | TCAAGTGGTCCAAATCATAGTTCTCATGTTCCACCATCTGATGTATaGTTTCATGACCAAAAACTCATTGGTGTTGCATTTTGGATTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSGPNHSSHVPPSDV*FHDQKLIGVAFWIS Trigger: AGAAATCCAAAATGCAACACCAATGAGTTTTTGGTCATGAAACCATACATCAGATGGTGGAACATGAGAACTATGATTTGGACCACTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGAACCTAGAAATCACTCTCCACACTCTGGCACGTTTCTAGGTGATAGTGATGGATTCTGTTTCTaGAACCTGCATAGGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: VKEPRNHSPHSGTFLGDSDGFCF*NLHRGK Trigger: TTTTCCCCTATGCAGGTTCCAGAAACAGAATCCATC...ACTATCACCTAGAAACGTGCCAGAGTGTGGAGAGTGATTTCTAGGTTCTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR TCA 90 bp | AATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGCATACCCTTAAGTCATATCTaGCCTCATCATGTGCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: NVLCNMPKEMDSVSGTCIPLSHI*PHHVPY Trigger: ATAGGGCACATGATGAGGTCAGATATGACTTAAGGG...TATGCAGGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAGAACCTAGAAATCACTCTCCACACTCTGGCACGTTTCTAGGTGATAGTAACCTTAAGCATATGTaGACATGTATAGGCACATCC | + |
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Preference number: 2 (lower is better) Translates to: VKEPRNHSPHSGTFLGDSNLKHM*TCIGTS Trigger: GGATGTGCCTATACATGTGCACATATGCTTAAGGTT...ACTATCACCTAGAAACGTGCCAGAGTGTGGAGAGTGATTTCTAGGTTCTTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGCATATCTGACCTCATCATGTaGCCTATAGAATGTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: NVLCNMPKEMDSVSGTCISDLIM*PIECVH Trigger: GTGCACACATTCTATAGGGCACATGATGAGGTCAGA...TATGCAGGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTAATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCGGATGCAGCAAATTTTaGGCAATCTCTGCTCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: TVNVLCNMPKEMDSVSGTGCSKF*AISALL Trigger: TAGAAGAGCAGAGATTGCTCAAAATTTGCTGCATCC...GGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATTAACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGAAATTTGCGAAGACAGTATCCAGAGGATTTAAATGCACTATAAGAACTCTCTTCATGTCAGTCTaGAGGCAGCTACACTGTACT | + |
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Preference number: 2 (lower is better) Translates to: SQKFAKTVSRGFKCTIRTLFMSV*RQLHCT Trigger: AGTACAGTGTAGCTGCCTTCAGACTGACATGAAGAG...AGTTCTTATAGTGCATTTAAATCCTCTGGATACTGTCTTCGCAAATTTCTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAGAACCTAGAAATCACTCTCCACACTCTGGCACGTTTCTAGGTGATAGTAGAGCTTCCATATTGTaGTTCAAGAACCATATTTTC | + |
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Preference number: 2 (lower is better) Translates to: VKEPRNHSPHSGTFLGDSRASIL*FKNHIF Trigger: GAAAATATGGTTCTTGAAGCACAATATGGAAGCTCT...ACTATCACCTAGAAACGTGCCAGAGTGTGGAGAGTGATTTCTAGGTTCTTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR CAA 90 bp | ATCTACAAGGTCTACAGGAAACTAGAAGAATGCAGCTATTGTCAGTaGTTACTCAGTTTGTTGTGTGTTTCTCAGGGATGCAGCAAATTT | + |
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Preference number: 2 (lower is better) Translates to: IYKVYRKLEECSYCQ*LLSLLCVSQGCSKF Trigger: AAATTTGCTGCATCCCTGAGAAACACACAACAAACTGAGTAACAACTGACAATAGCTGCATTCTTCTAGTTTCCTGTAGACCTTGTAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGCATATCACATATCTTGGAGTaGAGAAAACTCAAAGATTCT | + |
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Preference number: 2 (lower is better) Translates to: NVLCNMPKEMDSVSGTCISHILE*RKLKDS Trigger: AGAATCTTTGAGTTTTCTGCACTCCAAGATATGTGA...TATGCAGGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGAAATTTGCGAAGACAGTATCCAGAGGATTTAAATGCACTATAAGAACTATGTACTTTGCAACATaGCTAAGGAGATGGATTCTG | + |
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Preference number: 2 (lower is better) Translates to: SQKFAKTVSRGFKCTIRTMYFAT*LRRWIL Trigger: CAGAATCCATCTCCTTAGGCATGTTGCAAAGTACAT...AGTTCTTATAGTGCATTTAAATCCTCTGGATACTGTCTTCGCAAATTTCTGAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGAAATTTGCGAAGACAGTATCCAGAGGATTTAAATGCACTATAAGAACTCCACCATCTGATGTATaGTTTCATGACCAAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: SQKFAKTVSRGFKCTIRTPPSDV*FHDQKL Trigger: GAGTTTTTGGTCATGAAACCATACATCAGATGGTGG...AGTTCTTATAGTGCATTTAAATCCTCTGGATACTGTCTTCGCAAATTTCTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR CAA 90 bp | TTCCACCATCTGATGTATGGTTTCATGACCAAAAACTCATTGGTGTaGCATTTTGGATTTCTTAATATTAATACTTCAGCACATCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FHHLMYGFMTKNSLV*HFGFLNINTSAHQV Trigger: CACCTGATGTGCTGAAGTATTAATATTAAGAAATCCAAAATGCAACACCAATGAGTTTTTGGTCATGAAACCATACATCAGATGGTGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR GCA 72 bp | AACTCAGGATGTAAACACACTTCACATATCTTGGAGTaGAGAAAACTCAAAGATTCTCAAAGGGTCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: NSGCKHTSHILE*RKLKDSQRVSS Trigger: GGAGCTGACCCTTTGAGAATCTTTGAGTTTTCTGCACTCCAAGATATGTGAAGTGTGTTTACATCCTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR CAA 90 bp | AATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGCATATTGTTACTCAGTTTGTaGTGTGTTTCTCAGGGATGC | + |
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Preference number: 3 (lower is better) Translates to: NVLCNMPKEMDSVSGTCILLLSL*CVSQGC Trigger: GCATCCCTGAGAAACACACAACAAACTGAGTAACAA...TATGCAGGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGAAATTTGCGAAGACAGTATCCAGAGGATTTAAATGCACTATAAGAACTGGGATGCAGCAAATTTaGAGCAATCTCTGCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SQKFAKTVSRGFKCTIRTGMQQI*SNLCSS Trigger: AGAAGAGCAGAGATTGCTCAAAATTTGCTGCATCCC...AGTTCTTATAGTGCATTTAAATCCTCTGGATACTGTCTTCGCAAATTTCTGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGAAATTTGCGAAGACAGTATCCAGAGGATTTAAATGCACTATAAGAACTAATGGGATAGGACACTaGAGTAGACCTGGTGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: SQKFAKTVSRGFKCTIRTNGIGH*SRPGAN Trigger: ATTTGCACCAGGTCTACTCAAGTGTCCTATCCCATT...AGTTCTTATAGTGCATTTAAATCCTCTGGATACTGTCTTCGCAAATTTCTGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGTTAATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTTCCAATTGTTTTCCTaGTTAACACGCTATTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: TVNVLCNMPKEMDSVSGTFQLFS*LTRYCV Trigger: GACACAATAGCGTGTTAACAAGGAAAACAATTGGAA...GGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATTAACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR TCA 72 bp | AGGGGAAAAAGAGAATTAATTCCCTTAAGTCATATCTaGCCTCATCATGTGCCCTATAGAATGTGTGCACAT | + |
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Preference number: 3 (lower is better) Translates to: RGKRELIPLSHI*PHHVPYRMCAH Trigger: ATGTGCACACATTCTATAGGGCACATGATGAGGTCAGATATGACTTAAGGGAATTAATTCTCTTTTTCCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGAAATTTGCGAAGACAGTATCCAGAGGATTTAAATGCACTATAAGAACTGTGATAGTGCCCCATTaGTTGTTATTTTCTGGATGG | + |
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Preference number: 3 (lower is better) Translates to: SQKFAKTVSRGFKCTIRTVIVPH*LLFSGW Trigger: CCATCCAGAAAATAACAACAAATGGGGCACTATCAC...AGTTCTTATAGTGCATTTAAATCCTCTGGATACTGTCTTCGCAAATTTCTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR CCA 72 bp | CCAAATCATAGTTCTCATGTTCCACCATCTGATGTATaGTTTCATGACCAAAAACTCATTGGTGTTGCATTT | + |
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Preference number: 3 (lower is better) Translates to: PNHSSHVPPSDV*FHDQKLIGVAF Trigger: AAATGCAACACCAATGAGTTTTTGGTCATGAAACCATACATCAGATGGTGGAACATGAGAACTATGATTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR CCA 72 bp | AGAAGCATTTTGGGTGGTTTTGCGAGATTGTGGATATaGAATCTGTTTACTAGAAACAAGCTTATTTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: RSILGGFARLWI*NLFTRNKLISS Trigger: TGAGGAAATAAGCTTGTTTCTAGTAAACAGATTCCATATCCACAATCTCGCAAAACCACCCAAAATGCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR GCA 72 bp | CCTTCAGTTACAAAATTTGGGAACCTTAAGCATATGTaGACATGTATAGGCACATCCAAATACATTTGTATA | + |
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Preference number: 3 (lower is better) Translates to: PSVTKFGNLKHM*TCIGTSKYICI Trigger: TATACAAATGTATTTGGATGTGCCTATACATGTGCACATATGCTTAAGGTTCCCAAATTTTGTAACTGAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR CCA 90 bp | GTCAAAGAACCTAGAAATCACTCTCCACACTCTGGCACGTTTCTAGGTGATAGTCTATTGCACTCATTCTaGAGCTATGAGTGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VKEPRNHSPHSGTFLGDSLLHSF*SYECQQ Trigger: CTGCTGGCACTCATAGCTCCAGAATGAGTGCAATAG...ACTATCACCTAGAAACGTGCCAGAGTGTGGAGAGTGATTTCTAGGTTCTTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR TCA 90 bp | GTCAAAGAACCTAGAAATCACTCTCCACACTCTGGCACGTTTCTAGGTGATAGTGCCTGTATAACTGATTaGGTTGACCTGAGCCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: VKEPRNHSPHSGTFLGDSACITD*VDLSLY Trigger: ATACAGGCTCAGGTCAACTCAATCAGTTATACAGGC...ACTATCACCTAGAAACGTGCCAGAGTGTGGAGAGTGATTTCTAGGTTCTTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR TCA 90 bp | GTCAAAGAACCTAGAAATCACTCTCCACACTCTGGCACGTTTCTAGGTGATAGTGGTTTCCAAACAGTGTaGTCAGATATATGGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VKEPRNHSPHSGTFLGDSGFQTV*SDIWSG Trigger: TCCTGACCATATATCTGATCACACTGTTTGGAAACC...ACTATCACCTAGAAACGTGCCAGAGTGTGGAGAGTGATTTCTAGGTTCTTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR CCA 90 bp | GTCAAAGAACCTAGAAATCACTCTCCACACTCTGGCACGTTTCTAGGTGATAGTACAGGCTGTAGTTCTTaGTTATCTGATAGTCCCATG | + |
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Preference number: 4 (lower is better) Translates to: VKEPRNHSPHSGTFLGDSTGCSS*LSDSPM Trigger: CATGGGACTATCAGATAACCAAGAACTACAGCCTGT...ACTATCACCTAGAAACGTGCCAGAGTGTGGAGAGTGATTTCTAGGTTCTTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR TCA 90 bp | ACAGTTAATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGGAACATGCAAGCTTaGGAATATGAGCCAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: TVNVLCNMPKEMDSVSGTWNMQA*EYEPVH Trigger: GTGAACTGGCTCATATTCTCAAGCTTGCATGTTCCA...GGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATTAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR CCA 90 bp | AATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGCATAAGTGCCATCAAAGTGTaGAGCAGTGCATCTAGGATA | + |
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Preference number: 4 (lower is better) Translates to: NVLCNMPKEMDSVSGTCISAIKV*SSASRI Trigger: TATCCTAGATGCACTGCTCCACACTTTGATGGCACT...TATGCAGGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| 3UTR CAA 72 bp | GTCTACAGGAAACTAGAAGAATGCAGCTATTGTCAGTaGTTACTCAGTTTGTTGTGTGTTTCTCAGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: VYRKLEECSYCQ*LLSLLCVSQGC Trigger: GCATCCCTGAGAAACACACAACAAACTGAGTAACAACTGACAATAGCTGCATTCTTCTAGTTTCCTGTAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR GCA 90 bp | AATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGCATAGAATTTCCAACTTTGTaGAGAATGACAGACGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NVLCNMPKEMDSVSGTCIEFPTL*RMTDAV Trigger: CACTGCGTCTGTCATTCTGCACAAAGTTGGAAATTC...TATGCAGGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR CCA 90 bp | GTCAAAGAACCTAGAAATCACTCTCCACACTCTGGCACGTTTCTAGGTGATAGTAATGAAGAAATACCTTaGGGTATGGAGATTCGAATC | + |
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Preference number: 4 (lower is better) Translates to: VKEPRNHSPHSGTFLGDSNEEIP*GMEIRI Trigger: GATTCGAATCTCCATACCCCAAGGTATTTCTTCATT...ACTATCACCTAGAAACGTGCCAGAGTGTGGAGAGTGATTTCTAGGTTCTTTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR TCA 90 bp | AATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGCATAAAGAGAGGTTGGAAATaGAGAAATACCTTGGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: NVLCNMPKEMDSVSGTCIKRGWK*RNTLGY Trigger: ATACCCCAAGGTATTTCTTCATTTCCAACCTCTCTT...TATGCAGGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR CCA 90 bp | ACAGTTAATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCGATAGTCCCATGAGATaGAATTCTGTAGATTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TVNVLCNMPKEMDSVSGTDSPMR*NSVDSE Trigger: TTCAGAATCTACAGAATTCCATCTCATGGGACTATC...GGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATTAACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR CCA 90 bp | AATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCTGCATAAATTATACCAGACAGTaGAAGAATACCAAACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: NVLCNMPKEMDSVSGTCINYTRQ*KNTKQA Trigger: AGCCTGTTTGGTATTCTTCCACTGTCTGGTATAATT...TATGCAGGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS-3UTR TCA 90 bp | TCTCAGAAATTTGCGAAGACAGTATCCAGAGGATTTAAATGCACTATAAGAACTGAATTCTGTAGATTCTaGAACGTTTCCTCTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SQKFAKTVSRGFKCTIRTEFCRF*NVSSLH Trigger: ATGAAGAGAGGAAACGTTTCAGAATCTACAGAATTC...AGTTCTTATAGTGCATTTAAATCCTCTGGATACTGTCTTCGCAAATTTCTGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS CCA 90 bp | ATTTCCAACTTTGTGCAGAATGACAGACGCAGTGCCATCAAAGTGTaGAGCAGTGCATCTAGGATACTTAGCAAGAAGGACAACAAAACC | + |
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Preference number: 5 (lower is better) Translates to: ISNFVQNDRRSAIKV*SSASRILSKKDNKT Trigger: GGTTTTGTTGTCCTTCTTGCTAAGTATCCTAGATGCACTGCTCCACACTTTGATGGCACTGCGTCTGTCATTCTGCACAAAGTTGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060601.5 ENSMUST00000218385.2 |
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| CDS-3UTR CAA 90 bp | ACAGTTAATGTACTTTGCAACATGCCTAAGGAGATGGATTCTGTTTCTGGAACCGAATACCAAACAGGCTaGTCACCAAATACACCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TVNVLCNMPKEMDSVSGTEYQTG*SPNTPE Trigger: TTCTGGTGTATTTGGTGACAAGCCTGTTTGGTATTC...GGTTCCAGAAACAGAATCCATCTCCTTAGGCATGTTGCAAAGTACATTAACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218385.2 |
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| CDS GCA 72 bp | TTACAGAGGCTATTGCACTCATTCTGGAGCTATGAGTaGCAGCAGAACTTAAATAAACACCAAAACCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LQRLLHSFWSYE*QQNLNKHQNLS Trigger: GGACAGGTTTTGGTGTTTATTTAAGTTCTGCTGGCACTCATAGCTCCAGAATGAGTGCAATAGCCTCTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060601.5 ENSMUST00000218385.2 |
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| CDS CCA 72 bp | GTCAGGAAGACTCCAAATAAGACAGGCTGTAGTTCTTaGTTATCTGATAGTCCCATGAGATGGAATTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VRKTPNKTGCSS*LSDSPMRWNSV Trigger: TACAGAATTCCATCTCATGGGACTATCAGATAACCAAGAACTACAGCCTGTCTTATTTGGAGTCTTCCTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060601.5 ENSMUST00000218385.2 |
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