Pregenerated sensors for OLFR830 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062868Ensembl transcript IDs: ENSMUST00000078861.3, ENSMUST00000212723.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGTAACCTCTGCTGGATTTCCTATGCTCCAGTAAACAGTTCTATACTCATGGATATCTTCCCAGAACCATaGTTGAGCAGCTTACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: CNLCWISYAPVNSSILMDIFPEP*LSSLQP Trigger: TGGCTGTAAGCTGCTCAATCATGGTTCTGGGAAGAT...ATCCATGAGTATAGAACTGTTTACTGGAGCATAGGAAATCCAGCAGAGGTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTACAGCCACCAGAGTTTCTGTTCAACATCATCTAAAATACTCTGCCGGCTCAAAGCAAGACAGATaGAAAACCAAGTTAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QLTATRVSVQHHLKYSAGSKQDR*KTKLRS Trigger: TGACCTTAACTTGGTTTTTCATCTGTCTTGCTTTGA...GCCGGCAGAGTATTTTAGATGATGTTGAACAGAAACTCTGGTGGCTGTAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| 3UTR-3UTR TCA 90 bp | TGTAACCTCTGCTGGATTTCCTATGCTCCAGTAAACAGTTCTATACTCATGGATCTAAGTCCAAGACAGTaGTTGGAGTTTCCCATTACC | + |
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Preference number: 2 (lower is better) Translates to: CNLCWISYAPVNSSILMDLSPRQ*LEFPIT Trigger: GGTAATGGGAAACTCCAATCACTGTCTTGGACTTAG...ATCCATGAGTATAGAACTGTTTACTGGAGCATAGGAAATCCAGCAGAGGTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCTTACAGCCACCAGAGTTTCTGTTCAACATCATCTAAAATACTCTGCCGGCCTAGGTTCAGAGCATTaGACACACTCTTCTGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: QLTATRVSVQHHLKYSAGLGSEH*THSSGL Trigger: TAGGCCAGAAGAGTGTGTCAAATGCTCTGAACCTAG...GCCGGCAGAGTATTTTAGATGATGTTGAACAGAAACTCTGGTGGCTGTAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| 3UTR TCA 72 bp | CTGTTTTCCCAGAAGTTATCTTCCCAGAACCATGATTaGGCAGCTTACAGCCACCAGAGTTTCTGTTCAACA | + |
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Preference number: 3 (lower is better) Translates to: LFSQKLSSQNHD*AAYSHQSFCST Trigger: TGTTGAACAGAAACTCTGGTGGCTGTAAGCTGCTCAATCATGGTTCTGGGAAGATAACTTCTGGGAAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| 3UTR CCA 72 bp | TGCAACTCTAGGTTCAGAGCATTTGACACACTCTTCTaGCCTATAAGGGAACTAGGCCTATTCATGGTATTC | + |
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Preference number: 3 (lower is better) Translates to: CNSRFRAFDTLF*PIRELGLFMVF Trigger: GAATACCATGAATAGGCCTAGTTCCCTTATAGGCCAGAAGAGTGTGTCAAATGCTCTGAACCTAGAGTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR CCA 90 bp | TGTAACCTCTGCTGGATTTCCTATGCTCCAGTAAACAGTTCTATACTCATGGATACAACAAAGCAGGCCTaGCTGAGGCAGCCAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: CNLCWISYAPVNSSILMDTTKQA*LRQPAK Trigger: TTTTGCTGGCTGCCTCAGCCAGGCCTGCTTTGTTGT...ATCCATGAGTATAGAACTGTTTACTGGAGCATAGGAAATCCAGCAGAGGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR CCA 90 bp | CCCAGAACCATGATTGAGCAGCTTACAGCCACCAGAGTTTCTGTTCAACATCATAAGAACAAAGATGAATaGCTGCAGCTCTGGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: PRTMIEQLTATRVSVQHHKNKDE*LQLWVI Trigger: AATGACCCAGAGCTGCAGCCATTCATCTTTGTTCTT...ATGATGTTGAACAGAAACTCTGGTGGCTGTAAGCTGCTCAATCATGGTTCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR TCA 90 bp | CAACAGGCATTTTATCTCAAGAGAAATCCTATAACTTCGCTTACTATAAACACCCAAAGCAGGCCTGGCTaGGGCAGCCAGCAAAAGTTA | + |
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Preference number: 4 (lower is better) Translates to: QQAFYLKRNPITSLTINTQSRPG*GSQQKL Trigger: TAACTTTTGCTGGCTGCCTCAGCCAGGCCTGCTTTG...GGTGTTTATAGTAAGCGAAGTTATAGGATTTCTCTTGAGATAAAATGCCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR GCA 90 bp | TGTAACCTCTGCTGGATTTCCTATGCTCCAGTAAACAGTTCTATACTCATGGATGGATTTCCAGGTCTGTaGAGAAGGACAAGTACAGCA | + |
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Preference number: 4 (lower is better) Translates to: CNLCWISYAPVNSSILMDGFPGL*RRTSTA Trigger: TGCTGTACTTGTCCTTCTGCACAGACCTGGAAATCC...ATCCATGAGTATAGAACTGTTTACTGGAGCATAGGAAATCCAGCAGAGGTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR CCA 90 bp | GATGCTAATAGTGCCAAATATAGCAACACAATTACTTTCCCCTTTATTAGCATGGAATGGCTGCAGCTCTaGGTCATTTGTGAGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: DANSAKYSNTITFPFISMEWLQL*VICESM Trigger: CATGGACTCACAAATGACCCAGAGCTGCAGCCATTC...CATGCTAATAAAGGGGAAAGTAATTGTGTTGCTATATTTGGCACTATTAGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR GCA 90 bp | TACACCACTAAACTTGAACATCCTTATCACAGCCCTTTCCAGGGACTTGACAAAAAGCTTCAGGATTTGTaGAATTTCACAGAAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: YTTKLEHPYHSPFQGLDKKLQDL*NFTEEV Trigger: CACTTCTTCTGTGAAATTGCACAAATCCTGAAGCTT...TTTGTCAAGTCCCTGGAAAGGGCTGTGATAAGGATGTTCAAGTTTAGTGGTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR GCA 90 bp | CAACAGGCATTTTATCTCAAGAGAAATCCTATAACTTCGCTTACTATAAACACCACAAAGATGAATGGCTaGAGCTCTGGGTCATTTGTG | + |
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Preference number: 4 (lower is better) Translates to: QQAFYLKRNPITSLTINTTKMNG*SSGSFV Trigger: CACAAATGACCCAGAGCTGCAGCCATTCATCTTTGT...GGTGTTTATAGTAAGCGAAGTTATAGGATTTCTCTTGAGATAAAATGCCTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR GCA 90 bp | TACACCACTAAACTTGAACATCCTTATCACAGCCCTTTCCAGGGACTTGACAAAATAAGAAAAGATTATTaGAAACAGAGGAAGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: YTTKLEHPYHSPFQGLDKIRKDY*KQRKTS Trigger: GCTGGTCTTCCTCTGTTTGCAATAATCTTTTCTTAT...TTTGTCAAGTCCCTGGAAAGGGCTGTGATAAGGATGTTCAAGTTTAGTGGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR TCA 90 bp | CAACAGGCATTTTATCTCAAGAGAAATCCTATAACTTCGCTTACTATAAACACCGCTCTGGGTCATTTGTaGGTCCATGTAGAAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: QQAFYLKRNPITSLTINTALGHL*VHVEKY Trigger: ATATTTTTCTACATGGACTCACAAATGACCCAGAGC...GGTGTTTATAGTAAGCGAAGTTATAGGATTTCTCTTGAGATAAAATGCCTGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR CAA 90 bp | CAGCTTACAGCCACCAGAGTTTCTGTTCAACATCATCTAAAATACTCTGCCGGCCAAAGGGATTCAACATaGGAGGAACTACTGAATACA | + |
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Preference number: 5 (lower is better) Translates to: QLTATRVSVQHHLKYSAGQRDST*EELLNT Trigger: TGTATTCAGTAGTTCCTCCAATGTTGAATCCCTTTG...GCCGGCAGAGTATTTTAGATGATGTTGAACAGAAACTCTGGTGGCTGTAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR CAA 90 bp | CAGCTTACAGCCACCAGAGTTTCTGTTCAACATCATCTAAAATACTCTGCCGGCCCACAGCAATCTTCTTaGGTGAATCAATTACTTTTG | + |
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Preference number: 5 (lower is better) Translates to: QLTATRVSVQHHLKYSAGPQQSS*VNQLLL Trigger: CAAAAGTAATTGATTCACCAAAGAAGATTGCTGTGG...GCCGGCAGAGTATTTTAGATGATGTTGAACAGAAACTCTGGTGGCTGTAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS-3UTR CAA 90 bp | CAACAGGCATTTTATCTCAAGAGAAATCCTATAACTTCGCTTACTATAAACACCACAAATATCAGGATGTaGTTGATGAGGCTGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: QQAFYLKRNPITSLTINTTNIRM*LMRLSE Trigger: TTCTGACAGCCTCATCAACAACATCCTGATATTTGT...GGTGTTTATAGTAAGCGAAGTTATAGGATTTCTCTTGAGATAAAATGCCTGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212723.3 |
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| CDS TCA 72 bp | CAAATATTGTACAAACTACAACAAAGCAGGCCTGGCTaGGGCAGCCAGCAAAAGTTATCCTCTGATCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: QILYKLQQSRPG*GSQQKLSSDLL Trigger: CAAAAGATCAGAGGATAACTTTTGCTGGCTGCCTCAGCCAGGCCTGCTTTGTTGTAGTTTGTACAATATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078861.3 ENSMUST00000212723.3 |
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