Pregenerated sensors for OLFR829 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051414Ensembl transcript IDs: ENSMUST00000058411.4, ENSMUST00000212229.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATGCAAATGACAGTGCTGTGAAGGTGGGAGGCATCTCCAGGATGTaGCAAAGACCTGGGATAAGGGAGGTACCCAAGAATCAATGGCAG | + |
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Preference number: 1 (lower is better) Translates to: YANDSAVKVGGISRM*QRPGIREVPKNQWQ Trigger: CTGCCATTGATTCTTGGGTACCTCCCTTATCCCAGGTCTTTGTCACATCCTGGAGATGCCTCCCACCTTCACAGCACTGTCATTTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR TCA 90 bp | CAGTGGGGAGAGGATGTGCCTACCCTTCAGAAACTTGATGTTCAATaGTGGAAGGATACAACAGAGAGAGTTTCTACCCTCTCAGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: QWGEDVPTLQKLDVQ*WKDTTERVSTLSED Trigger: ATCCTCTGAGAGGGTAGAAACTCTCTCTGTTGTATCCTTCCATCATTGAACATCAAGTTTCTGAAGGGTAGGCACATCCTCTCCCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR TCA 90 bp | TATGGAGAGGGACAACAAAAACTTCCAGATGGCCATGAGAATTGGTaGAATTATGCAAATGACAGTGCTGTGAAGGTGGGAGGCATCTCC | + |
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Preference number: 1 (lower is better) Translates to: YGEGQQKLPDGHENW*NYANDSAVKVGGIS Trigger: GGAGATGCCTCCCACCTTCACAGCACTGTCATTTGCATAATTTCACCAATTCTCATGGCCATCTGGAAGTTTTTGTTGTCCCTCTCCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CCA 90 bp | AGGAACTCTACAGGAAGACCAACAGAGTCAATTAACCTGGACCCTTaGGGCTCTAAGAGACTGAATAACCAACAAACGTGTATAAACAGG | + |
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Preference number: 1 (lower is better) Translates to: RNSTGRPTESINLDP*GSKRLNNQQTCINR Trigger: CCTGTTTATACACGTTTGTTGGTTATTCAGTCTCTTAGAGCCCCAAGGGTCCAGGTTAATTGACTCTGTTGGTCTTCCTGTAGAGTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CAA 90 bp | TTATCTGGCCTCAGTGGGGAGAGGATGTGCCTACCCTTCAGAAACTaGATGTTCAATGATGGAAGGATACAACAGAGAGAGTTTCTACCC | + |
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Preference number: 2 (lower is better) Translates to: LSGLSGERMCLPFRN*MFNDGRIQQREFLP Trigger: GGGTAGAAACTCTCTCTGTTGTATCCTTCCATCATTGAACATCAAGTTTCTGAAGGGTAGGCACATCCTCTCCCCACTGAGGCCAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR CCA 90 bp | TATTTGACAGACCCAAAGAAACTAAAACAAGGGTGGTACAAGGGGGTAATGCTTCTTATCTGGCCTCAGTaGGGAGAGGATGTGCCTACC | + |
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Preference number: 2 (lower is better) Translates to: YLTDPKKLKQGWYKGVMLLIWPQ*GEDVPT Trigger: GGTAGGCACATCCTCTCCCCACTGAGGCCAGATAAG...AAGCATTACCCCCTTGTACCACCCTTGTTTTAGTTTCTTTGGGTCTGTCAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATTATCCCACAAAGACACTTGCACACCTGGGTTCATAGCAGTTTTATTCATAGCATGACTGTCCTATaGGAGGCTCTACCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: FIIPQRHLHTWVHSSFIHSMTVL*EALPSS Trigger: GCTGCTGGGTAGAGCCTCTCATAGGACAGTCATGCT...ATGAATAAAACTGCTATGAACCCAGGTGTGCAAGTGTCTTTGTGGGATAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTGGATCTCACTTAGAATGGGGAATAAAATAGTCATAGGACACAGATGGAGGAGATGGGAAAGGGGATaGCAGGGGAATGGTAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: AWISLRMGNKIVIGHRWRRWERG*QGNGKV Trigger: AACCTTACCATTCCCCTGTCATCCCCTTTCCCATCT...CCTCCATCTGTGTCCTATGACTATTTTATTCCCCATTCTAAGTGAGATCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR TCA 90 bp | GTTATATTTGACAGACCCAAAGAAACTAAAACAAGGGTGGTACAAGGGGGTAATGGCATCTCCAGGATGTaGCAAAGACCTGGGATAAGG | + |
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Preference number: 2 (lower is better) Translates to: VIFDRPKETKTRVVQGGNGISRM*QRPGIR Trigger: CCTTATCCCAGGTCTTTGTCACATCCTGGAGATGCC...ATTACCCCCTTGTACCACCCTTGTTTTAGTTTCTTTGGGTCTGTCAAATATAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGGCAGTCTGGAACACCGGTGGAGTGATAGTGAAACAAACATACCCACAAAGTGGAGAGGGATTGTGTaGTGGAAAAGTAAAGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: VGSLEHRWSDSETNIPTKWRGIV*WKSKVN Trigger: ATTTACTTTACTTTTCCATCACACAATCCCTCTCCA...CTTTGTGGGTATGTTTGTTTCACTATCACTCCACCGGTGTTCCAGACTGCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR GCA 90 bp | ACCGGTGGAGTGATAGTGAAACAAACATACCCACAAAGTCATGGAAACAAATTTAGTGGGGAGAGGATGTaGCTACCCTTCAGAAACTTG | + |
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Preference number: 2 (lower is better) Translates to: TGGVIVKQTYPQSHGNKFSGERM*LPFRNL Trigger: CAAGTTTCTGAAGGGTAGGCACATCCTCTCCCCACT...AAATTTGTTTCCATGACTTTGTGGGTATGTTTGTTTCACTATCACTCCACCGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR TCA 90 bp | AACCTGGACCCTTGGGGCTCTAAGAGACTGAATAACCAACAAACGTGTATAAACTACCCTTCAGAAACTTaGTGTTCAATGATGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: NLDPWGSKRLNNQQTCINYPSET*CSMMEG Trigger: TCCTTCCATCATTGAACATCAAGTTTCTGAAGGGTA...GTTTATACACGTTTGTTGGTTATTCAGTCTCTTAGAGCCCCAAGGGTCCAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTGGATCTCACTTAGAATGGGGAATAAAATAGTCATAGGACACAGATGGAGGTGGCTTCCAAGTAACTaGAGGTCAAAAATTGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: AWISLRMGNKIVIGHRWRWLPSN*RSKIVA Trigger: GGCAACAATTTTTGACCTTCAGTTACTTGGAAGCCA...CCTCCATCTGTGTCCTATGACTATTTTATTCCCCATTCTAAGTGAGATCCAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR TCA 90 bp | TATTTGACAGACCCAAAGAAACTAAAACAAGGGTGGTACAAGGGGGTAATGCTTGTGAAATTATGCAAATaGCAGTGCTGTGAAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: YLTDPKKLKQGWYKGVMLVKLCK*QCCEGG Trigger: CCCACCTTCACAGCACTGTCATTTGCATAATTTCAC...AAGCATTACCCCCTTGTACCACCCTTGTTTTAGTTTCTTTGGGTCTGTCAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CAA 90 bp | GAACTGTCTTCATGTGGCTTCCAAGTAACTGAAGGTCAAAAATTGTaGCCTGTCTATGGTGTATGTTCTTCTAGATGGACTGCCTTATCT | + |
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Preference number: 2 (lower is better) Translates to: ELSSCGFQVTEGQKL*PVYGVCSSRWTALS Trigger: AGATAAGGCAGTCCATCTAGAAGAACATACACCATAGACAGGCAACAATTTTTGACCTTCAGTTACTTGGAAGCCACATGAAGACAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR TCA 72 bp | GACAGTGCTGTGAAGGTGGGAGGCATCTCCAGGATGTaGCAAAGACCTGGGATAAGGGAGGTACCCAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: DSAVKVGGISRM*QRPGIREVPKN Trigger: ATTCTTGGGTACCTCCCTTATCCCAGGTCTTTGTCACATCCTGGAGATGCCTCCCACCTTCACAGCACTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CCA 72 bp | GAAGGTGGGAGGCATCTCCAGGATGTGACAAAGACCTaGGATAAGGGAGGTACCCAAGAATCAATGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: EGGRHLQDVTKT*DKGGTQESMAV Trigger: CACTGCCATTGATTCTTGGGTACCTCCCTTATCCCAGGTCTTTGTCACATCCTGGAGATGCCTCCCACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CCA 72 bp | AAGAGGCCACAGCCTGTAGGCAGTCTGGAACACCGGTaGAGTGATAGTGAAACAAACATACCCACAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: KRPQPVGSLEHR*SDSETNIPTKS Trigger: TGACTTTGTGGGTATGTTTGTTTCACTATCACTCCACCGGTGTTCCAGACTGCCTACAGGCTGTGGCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGTGACAAAGACCTGGGATAAGGGAGGTACCCAAGAATCAATGGCAGTGAGATGTGGAGAGGGATaGTGTGATGGAAAAGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: QDVTKTWDKGGTQESMAVRCGEG*CDGKVK Trigger: CTTTACTTTTCCATCACACAATCCCTCTCCACATCT...CACTGCCATTGATTCTTGGGTACCTCCCTTATCCCAGGTCTTTGTCACATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CCA 72 bp | AAATTGTTGCCTGTCTATGGTGTATGTTCTTCTAGATaGACTGCCTTATCTGGCCTCAGTGGGGAGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: KLLPVYGVCSSR*TALSGLSGERM Trigger: CATCCTCTCCCCACTGAGGCCAGATAAGGCAGTCCATCTAGAAGAACATACACCATAGACAGGCAACAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CCA 72 bp | ACAGGAAGACCAACAGAGTCAATTAACCTGGACCCTTaGGGCTCTAAGAGACTGAATAACCAACAAACGTGT | + |
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Preference number: 3 (lower is better) Translates to: TGRPTESINLDP*GSKRLNNQQTC Trigger: ACACGTTTGTTGGTTATTCAGTCTCTTAGAGCCCCAAGGGTCCAGGTTAATTGACTCTGTTGGTCTTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR TCA 72 bp | GGACAACAAAAACTTCCAGATGGCCATGAGAATTGGTaGAATTATGCAAATGACAGTGCTGTGAAGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GQQKLPDGHENW*NYANDSAVKVG Trigger: TCCCACCTTCACAGCACTGTCATTTGCATAATTTCACCAATTCTCATGGCCATCTGGAAGTTTTTGTTGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR CAA 90 bp | GCTTGGATCTCACTTAGAATGGGGAATAAAATAGTCATAGGACACAGATGGAGGCTACCCTTCAGAAACTaGATGTTCAATGATGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: AWISLRMGNKIVIGHRWRLPFRN*MFNDGR Trigger: CCTTCCATCATTGAACATCAAGTTTCTGAAGGGTAG...CCTCCATCTGTGTCCTATGACTATTTTATTCCCCATTCTAAGTGAGATCCAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR-3UTR CAA 90 bp | ACCGGTGGAGTGATAGTGAAACAAACATACCCACAAAGTCATGGAAACAAATTTGAAGGTCAAAAATTGTaGCCTGTCTATGGTGTATGT | + |
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Preference number: 3 (lower is better) Translates to: TGGVIVKQTYPQSHGNKFEGQKL*PVYGVC Trigger: ACATACACCATAGACAGGCAACAATTTTTGACCTTC...AAATTTGTTTCCATGACTTTGTGGGTATGTTTGTTTCACTATCACTCCACCGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR GCA 72 bp | TACCCAAAAGATGTTTCATTATCCCACAAAGACACTTaGACACCTGGGTTCATAGCAGTTTTATTCATAATA | + |
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Preference number: 3 (lower is better) Translates to: YPKDVSLSHKDT*TPGFIAVLFII Trigger: TATTATGAATAAAACTGCTATGAACCCAGGTGTGCAAGTGTCTTTGTGGGATAATGAAACATCTTTTGGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CCA 72 bp | AGATGTTTCATTATCCCACAAAGACACTTGCACACCTaGGTTCATAGCAGTTTTATTCATAATAATCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: RCFIIPQRHLHT*VHSSFIHNNLN Trigger: ATTCAGATTATTATGAATAAAACTGCTATGAACCCAGGTGTGCAAGTGTCTTTGTGGGATAATGAAACATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR TCA 90 bp | GCCTTATCTGGCCTCAGTGGGGAGAGGATGTGCCTACCCTTCAGAAACTTGATGATGGGGGTATGGAGATaGGAGTCAAAGTTGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ALSGLSGERMCLPFRNLMMGVWR*ESKLVA Trigger: GGCCACCAACTTTGACTCTCATCTCCATACCCCCAT...CATCAAGTTTCTGAAGGGTAGGCACATCCTCTCCCCACTGAGGCCAGATAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR TCA 90 bp | AGGGAACAAGATGGGAAAGGGGATGACAGGGGAATGGTAAGGTTTAAGATCAGGTCAGGAGGTTTCCTATaGCTGTTGCAAGGTACATGG | + |
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Preference number: 4 (lower is better) Translates to: REQDGKGDDRGMVRFKIRSGGFL*LLQGTW Trigger: CCATGTACCTTGCAACAGTCATAGGAAACCTCCTGA...CCTGATCTTAAACCTTACCATTCCCCTGTCATCCCCTTTCCCATCTTGTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR TCA 90 bp | GATATAGAATCTGAAGAGGCCACAGCCTGTAGGCAGTCTGGAACACCGGTGGAGGACAATATGACAAAATaGTGCCAGAAAGAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: DIESEEATACRQSGTPVEDNMTK*CQKEEH Trigger: GTGTTCCTCTTTCTGGCATCATTTTGTCATATTGTC...CTCCACCGGTGTTCCAGACTGCCTACAGGCTGTGGCCTCTTCAGATTCTATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR GCA 90 bp | GACTGCCTTATCTGGCCTCAGTGGGGAGAGGATGTGCCTACCCTTCAGAAACTTGTTTCCTATGACTGTTaGAAGGTACATGGAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: DCLIWPQWGEDVPTLQKLVSYDC*KVHGKK Trigger: TTTCTTTCCATGTACCTTGCAACAGTCATAGGAAAC...AAGTTTCTGAAGGGTAGGCACATCCTCTCCCCACTGAGGCCAGATAAGGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| 3UTR CAA 72 bp | CTCAGTGGGGAGAGGATGTGCCTACCCTTCAGAAACTaGATGTTCAATGATGGAAGGATACAACAGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LSGERMCLPFRN*MFNDGRIQQRE Trigger: CTCTCTCTGTTGTATCCTTCCATCATTGAACATCAAGTTTCTGAAGGGTAGGCACATCCTCTCCCCACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR TCA 90 bp | TCAATTAACCTGGACCCTTGGGGCTCTAAGAGACTGAATAACCAACAAACGTGTGACATCCTCCATAAGTaGTGTTCTGGTTTCCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: SINLDPWGSKRLNNQQTCDILHK*CSGFLF Trigger: AAACAGGAAACCAGAACATCACTTATGGAGGATGTC...ACACGTTTGTTGGTTATTCAGTCTCTTAGAGCCCCAAGGGTCCAGGTTAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR GCA 90 bp | AACCTGGACCCTTGGGGCTCTAAGAGACTGAATAACCAACAAACGTGTATAAACGAAGGCAATTTTCCATaGCAACAGACACCAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: NLDPWGSKRLNNQQTCINEGNFP*QQTPRQ Trigger: TTGTCTTGGTGTCTGTTGGCATGGAAAATTGCCTTC...GTTTATACACGTTTGTTGGTTATTCAGTCTCTTAGAGCCCCAAGGGTCCAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR CCA 90 bp | AGGGAACAAGATGGGAAAGGGGATGACAGGGGAATGGTAAGGTTTAAGATCAGGACATTCTCAAGACAGTaGTTGCAATTTGACAATATG | + |
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Preference number: 4 (lower is better) Translates to: REQDGKGDDRGMVRFKIRTFSRQ*LQFDNM Trigger: CATATTGTCAAATTGCAACCACTGTCTTGAGAATGT...CCTGATCTTAAACCTTACCATTCCCCTGTCATCCCCTTTCCCATCTTGTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR CCA 90 bp | TTATATTTGACAGACCCAAAGAAACTAAAACAAGGGTGGTACAAGGGGGTAATGGATCCTATACCTAAGTaGATGGCAAATAGCAACATA | + |
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Preference number: 4 (lower is better) Translates to: LYLTDPKKLKQGWYKGVMDPIPK*MANSNI Trigger: TATGTTGCTATTTGCCATCCACTTAGGTATAGGATC...CATTACCCCCTTGTACCACCCTTGTTTTAGTTTCTTTGGGTCTGTCAAATATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR CCA 90 bp | TTCATTATCCCACAAAGACACTTGCACACCTGGGTTCATAGCAGTTTTATTCATTTCACAGAAGAAATGTaGGATTATGAGTTCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FIIPQRHLHTWVHSSFIHFTEEM*DYEFCA Trigger: TGCACAGAACTCATAATCCCACATTTCTTCTGTGAA...ATGAATAAAACTGCTATGAACCCAGGTGTGCAAGTGTCTTTGTGGGATAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR CAA 90 bp | TCTTCTAGATGGACTGCCTTATCTGGCCTCAGTGGGGAGAGGATGTGCCTACCCTTGTCAATAAGAGTGTaGGAACAGGCAAGTTTAGTA | + |
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Preference number: 5 (lower is better) Translates to: SSRWTALSGLSGERMCLPLSIRV*EQASLV Trigger: TACTAAACTTGCCTGTTCCAACACTCTTATTGACAA...GGGTAGGCACATCCTCTCCCCACTGAGGCCAGATAAGGCAGTCCATCTAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR CAA 90 bp | TTCATTATCCCACAAAGACACTTGCACACCTGGGTTCATAGCAGTTTTATTCATGTTCTGGTTTCCTGTTaGTATATTCACCAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: FIIPQRHLHTWVHSSFIHVLVSC*YIHQHL Trigger: AAGATGCTGGTGAATATACAAACAGGAAACCAGAAC...ATGAATAAAACTGCTATGAACCCAGGTGTGCAAGTGTCTTTGTGGGATAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS-3UTR CAA 90 bp | GTTATATTTGACAGACCCAAAGAAACTAAAACAAGGGTGGTACAAGGGGGTAATTTCTCAAGACAGTGGTaGCAATTTGACAATATGACA | + |
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Preference number: 5 (lower is better) Translates to: VIFDRPKETKTRVVQGGNFSRQW*QFDNMT Trigger: TGTCATATTGTCAAATTGCAACCACTGTCTTGAGAA...ATTACCCCCTTGTACCACCCTTGTTTTAGTTTCTTTGGGTCTGTCAAATATAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212229.3 |
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| CDS TCA 72 bp | AGACAAAGCAGACCTGAGTCAGACATCCTCCATAAGTaGTGTTCTGGTTTCCTGTTTGTATATTCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RQSRPESDILHK*CSGFLFVYSPA Trigger: TGCTGGTGAATATACAAACAGGAAACCAGAACATCACTTATGGAGGATGTCTGACTCAGGTCTGCTTTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058411.4 ENSMUST00000212229.3 |
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