Pregenerated sensors for OLFR827 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045559Ensembl transcript IDs: ENSMUST00000058123.6, ENSMUST00000213568.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCATCCCTCTGCTCTTTGGACTGGGTCTCAATGTCTCACTGGGCATaGCAGGAATTGCTGGAGCAGCCCTCATCCAAACACACCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: SSLCSLDWVSMSHWA*QELLEQPSSKHTIW Trigger: CCAGATGGTGTGTTTGGATGAGGGCTGCTCCAGCAATTCCTGTCATGCCCAGTGAGACATTGAGACCCAGTCCAAAGAGCAGAGGGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR TCA 90 bp | CCCAATGGAACAACAAGATCTCCTGCAAGGACATCAATGACCTGGTaGCTGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: PNGTTRSPARTSMTW*LLLRPCALHKLPSP Trigger: AGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCAGTCACCAGGTCATTGATGTCCTTGCAGGAGATCTTGTTGTTCCATTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR GCA 90 bp | CTCGGTTCTATACTAGCCATTGGAGCCTTGCTTCTCCTGGCACCCTaGCTTATCCAACTTCTAAAACAGCAGATGAGTAGCTGTTTGGTC | + |
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Preference number: 1 (lower is better) Translates to: LGSILAIGALLLLAP*LIQLLKQQMSSCLV Trigger: GACCAAACAGCTACTCATCTGCTGTTTTAGAAGTTGGATAAGGCAGGGTGCCAGGAGAAGCAAGGCTCCAATGGCTAGTATAGAACCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR TCA 90 bp | GAACTGGTAAGGTTGAGTGAGCCCAGACCCTGCGAATATCAGAATTaGGAACTGCAGGAGTGGAGCCATTTCTTGTCTACCTTTACCTGT | + |
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Preference number: 1 (lower is better) Translates to: ELVRLSEPRPCEYQN*ELQEWSHFLSTFTC Trigger: ACAGGTAAAGGTAGACAAGAAATGGCTCCACTCCTGCAGTTCTCAATTCTGATATTCGCAGGGTCTGGGCTCACTCAACCTTACCAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR TCA 90 bp | TGCTCCAACATCCCTACCCTATGGTACTCAAATCTTTTGGTAGCTTaGCTTCTTCCCCTCCTCGGTTCTATACTAGCCATTGGAGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: CSNIPTLWYSNLLVA*LLPLLGSILAIGAL Trigger: CAAGGCTCCAATGGCTAGTATAGAACCGAGGAGGGGAAGAAGTCAAGCTACCAAAAGATTTGAGTACCATAGGGTAGGGATGTTGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CCA 90 bp | GCCCTGTCTTTACTACCTCTCAATTCAAAACCTTCTGCTTACAATTaGGAAATTGCCCACCATACAGGGATTTCCCACAATCCTCGGGGC | + |
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Preference number: 1 (lower is better) Translates to: ALSLLPLNSKPSAYN*EIAHHTGISHNPRG Trigger: GCCCCGAGGATTGTGGGAAATCCCTGTATGGTGGGCAATTTCCCAATTGTAAGCAGAAGGTTTTGAATTGAGAGGTAGTAAAGACAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CCA 90 bp | AGAACTGCAGGAGTGGAGCCATTTCTTGTCTACCTTTACCTGTTCTaGAACAGTAATCTCAACACCCCCACTGAAAGGAACATGACTATC | + |
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Preference number: 1 (lower is better) Translates to: RTAGVEPFLVYLYLF*NSNLNTPTERNMTI Trigger: GATAGTCATGTTCCTTTCAGTGGGGGTGTTGAGATTACTGTTCCAGAACAGGTAAAGGTAGACAAGAAATGGCTCCACTCCTGCAGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CCA 90 bp | GCAGAACAAGACATACAAATGCTCAAAGATCTCCAGGAAGATCTCTaGGCACACTATGCTCCAACATCCCTACCCTATGGTACTCAAATC | + |
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Preference number: 1 (lower is better) Translates to: AEQDIQMLKDLQEDL*AHYAPTSLPYGTQI Trigger: GATTTGAGTACCATAGGGTAGGGATGTTGGAGCATAGTGTGCCCAGAGATCTTCCTGGAGATCTTTGAGCATTTGTATGTCTTGTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR TCA 90 bp | CTTCCTCCATTGGCACACACTAAAATAATCCCTCCTATCCTAGTGTaGTGGTGTGATACCTTGGATGGAATTTGGAAGGAACAAGATCCC | + |
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Preference number: 1 (lower is better) Translates to: LPPLAHTKIIPPILV*WCDTLDGIWKEQDP Trigger: GGGATCTTGTTCCTTCCAAATTCCATCCAAGGTATCACACCATCACACTAGGATAGGAGGGATTATTTTAGTGTGTGCCAATGGAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR GCA 90 bp | CATACAAATGCTCAAAGATCTCCAGGAAGATCTCTGGGCACACTATaGTCCAACATCCCTACCCTATGGTACTCAAATCTTTTGGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: HTNAQRSPGRSLGTL*SNIPTLWYSNLLVA Trigger: AGCTACCAAAAGATTTGAGTACCATAGGGTAGGGATGTTGGAGCATAGTGTGCCCAGAGATCTTCCTGGAGATCTTTGAGCATTTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR TCA 90 bp | TGCTCTTTCCCCCTTTCTTGGAAGTCTAGTTTACAGTTACTAGAATaGAGGGAATGCTGGATACCTCAGTTACATATTCTGACACAAAAG | + |
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Preference number: 1 (lower is better) Translates to: CSFPLSWKSSLQLLE*RECWIPQLHILTQK Trigger: CTTTTGTGTCAGAATATGTAACTGAGGTATCCAGCATTCCCTTCATTCTAGTAACTGTAAACTAGACTTCCAAGAAAGGGGGAAAGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CCA 90 bp | TGGATGGAATTTGGAAGGAACAAGATCCCTTTCTTACAACCAGAATaGGTTTTATTTGTATTTTTCCACAGTATCAGTCTATCTGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: WMEFGRNKIPFLQPE*VLFVFFHSISLSGF Trigger: GAACCCAGATAGACTGATACTGTGGAAAAATACAAATAAAACCCATTCTGGTTGTAAGAAAGGGATCTTGTTCCTTCCAAATTCCATCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCATGTCTCACTGGGCATaGCAGGAATTGCTGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGMSHWA*QELLEQ Trigger: CTGCTCCAGCAATTCCTGTCATGCCCAGTGAGACAT...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCTGCCTCTCAAGTGCTaGGATTATCAGCATGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGLPLKC*DYQHAP Trigger: CGGAGCATGCTGATAATCCCAGCACTTGAGAGGCAG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCACACCATCTGGCTGGTaGCTTCAAGACAACTTCACC | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGTPSGW*LQDNFT Trigger: GGTGAAGTTGTCTTGAAGTCACCAGCCAGATGGTGT...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCTTGAACTCAAAGCCTaGCTCTGCCTCTCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGLELKA*LCLSSA Trigger: AGCACTTGAGAGGCAGAGGCAGGCTTTGAGTTCAAG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCTCCAGGAAGATCTCTaGGCACACTATGCTCCAACA | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGLQEDL*AHYAPT Trigger: TGTTGGAGCATAGTGTGCCCAGAGATCTTCCTGGAG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCTCTCAACACCCCCACTaGAAGGAACATGACTATCAG | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGSQHPH*KEHDYQ Trigger: CTGATAGTCATGTTCCTTTCAGTGGGGGTGTTGAGA...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCTGCGAATATCAGAATTaGGAACTGCAGGAGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGCEYQN*ELQEWS Trigger: GCTCCACTCCTGCAGTTCTCAATTCTGATATTCGCA...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCATCAGAATTGAGAACTaGAGGAGTGGAGCCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGIRIEN*RSGAIS Trigger: AGAAATGGCTCCACTCCTGCAGTTCTCAATTCTGAT...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCGAGGGACTTACATTTTaGTGGGTGAGGAATATTTCT | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGEGLTF*WVRNIS Trigger: AGAAATATTCCTCACCCAGCAAAATGTAAGTCCCTC...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATAAGACTAGGCTGGCCTTaGACTCAAAGCCTGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKIRLGWP*TQSLPL Trigger: CAGAGGCAGGCTTTGAGTTCAAGGCCAGCCTAGTCT...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCTCTGTTTTCTCCACTaGAATCACAGCATATTATTG | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGLCFLH*NHSILL Trigger: CAATAATATGCTGTGATTTCAGTGGAGAAAACAGAG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCTCAACTGATGCATGCTaGTTATACACTTTTTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGSTDAC*LYTFSH Trigger: GTGAGAAAAAGTGTATAAGCAGCATGCATCAGTTGA...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCATACCCCTTTCCCTTTaGCTTGTAGAATCATTCTTA | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGIPLSL*LVESFL Trigger: TAAGAATGATTCTACAAGGCAAAGGGAAAGGGGTAT...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCATAAAACACACCACTaGCATTATACCAAGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGHKTHH*HYTKCH Trigger: ATGACACTTGGTATAATGCCAGTGGTGTGTTTTATG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 90 bp | ATGCTCCAACATCCCTACCCTATGGTACTCAAATCTTTTGGTAGCTaGACTTCTTCCCCTCCTCGGTTCTATACTAGCCATTGGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: MLQHPYPMVLKSFGS*TSSPPRFYTSHWSL Trigger: AAGGCTCCAATGGCTAGTATAGAACCGAGGAGGGGAAGAAGTCAAGCTACCAAAAGATTTGAGTACCATAGGGTAGGGATGTTGGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCTTCTCAACTGATGCATaGTGCTTATACACTTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGFSTDA*CLYTFS Trigger: AGAAAAAGTGTATAAGCAGCATGCATCAGTTGAGAA...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCGTCCCCAAATTGCTTTaGACATTTGCAGTAAATTAT | + |
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Preference number: 2 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGVPKLL*TFAVNY Trigger: ATAATTTACTGCAAATGTCCAAAGCAATTTGGGGAC...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATACCCGTTCTTTTCTGGTaGGAAGGCACTACAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKIPVLFW*EGTTSA Trigger: GGCACTTGTAGTGCCTTCCCACCAGAAAAGAACGGG...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 90 bp | CCCACAAAGGATTCAACAAAATCATACAAACTCAGGATTTCCCACTaGAAGGATGTCAGACCAGGACTGAGATTCCCTTACTCCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PTKDSTKSYKLRISH*KDVRPGLRFPYSSP Trigger: AGGGCTGGAGTAAGGGAATCTCAGTCCTGGTCTGACATCCTTCAAGTGGGAAATCCTGAGTTTGTATGATTTTGTTGAATCCTTTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCACATCAATGACCTGGTaGCTGCTGCTCAGGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFTSMTW*LLLRPC Trigger: ACATGGCCTGAGCAGCAGTCACCAGGTCATTGATGT...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATACATGACAGGAATTGCTaGAGCAGCCCTCATCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKIHDRNC*SSPHPN Trigger: GTTTGGATGAGGGCTGCTCCAGCAATTCCTGTCATG...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATACTCTGCTCTTTGGACTaGGTCTCAATGTCTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKILCSLD*VSMSHW Trigger: CCAGTGAGACATTGAGACCCAGTCCAAAGAGCAGAG...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 90 bp | AGGTGGCCTCCAGATATGGAGGTTGAAGATATTGGAGTTGCAGAATaGAATCCACCAGCAGCAACATCACCATGTTCACCAACCTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: RWPPDMEVEDIGVAE*NPPAATSPCSPTLK Trigger: TTTTAAGGTTGGTGAACATGGTGATGTTGCTGCTGGTGGATTCAATTCTGCAACTCCAATATCTTCAACCTCCATATCTGGAGGCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCTGTCTATCGACAGCATaGCCCTCCTCCAAATCAGTC | + |
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Preference number: 2 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFCLSTA*PSSKSV Trigger: GACTGATTTGGAGGAGGGGCATGCTGTCGATAGACA...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTACAATGACCAGCAGTTaGCCCCAACCCCAATCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCTMTSS*PQPQSL Trigger: CAGGGATTGGGGTTGGGGTCAACTGCTGGTCATTGT...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCAGATCTTCATCCCTCTaGTCTTTGGACTGGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFRSSSL*SLDWVS Trigger: TGAGACCCAGTCCAAAGAGCAGAGGGATGAAGATCT...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 90 bp | AAGGCCCTGGACTTACTGACTGTTAAACAGGGAGGGACTTACATTTaGCTGGGTGAGGAATATTTCTTCTATGTTAATGAATCTGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: KALDLLTVKQGGTYI*LGEEYFFYVNESGL Trigger: TAGCCCAGATTCATTAACATAGAAGAAATATTCCTCACCCAGCAAAATGTAAGTCCCTCCCTGTTTAACAGTCAGTAAGTCCAGGGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCGTGCACTGGAAAAGTTaGGGATCTGTCATCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFVHWKS*GSVISF Trigger: AAAGGAGATGACAGATCCTCAACTTTTCCAGTGCAC...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATAAGACATTCCTCTCTTTaGAATACCCCTTTCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKIRHSSL*NTPFPL Trigger: CAAAGGGAAAGGGGTATTTCAAAGAGAGGAATGTCT...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCTCCAGCCCTTTCCTCTaGTTTCCTTACCAAAACATA | + |
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Preference number: 2 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFSSPFL*FPYQNI Trigger: TATGTTTTGGTAAGGAAAGCAGAGGAAAGGGCTGGA...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTCATCCCTCTGCTCTTTaGACTGGGTCTCAATGTCTC | + |
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Preference number: 2 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCHPSAL*TGSQCL Trigger: GAGACATTGAGACCCAGTCCAAAGAGCAGAGGGATG...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATACAAGCTACCCTTTCCTaGAGACAATACATCCAATAT | + |
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Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKIQATLS*RQYIQY Trigger: ATATTGGATGTATTGTCTCCAGGAAAGGGTAGCTTG...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATAAACAAGACATACAAATaGTCAAAGATCTCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKINKTYK*SKISRK Trigger: CTTCCTGGAGATCTTTGAGCATTTGTATGTCTTGTT...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTTTCTATACTAGCCATTaGAGCCTTGCTTCTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCFYTSH*SLASPG Trigger: GCCAGGAGAAGCAAGGCTCCAATGGCTAGTATAGAA...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATACAGGTTGGATACCACTaGATACTGTTTAATTTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKIQVGYH*ILFNLV Trigger: TACTAAATTAAACAGTATGCAGTGGTATCCAACCTG...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATATTGTTTTTCAAGACGTaGTTTCTCTGTGTAACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: QNIGKMPLGGLQIWRLKILFFKT*FLCVTV Trigger: TACAGTTACACAGAGAAACCACGTCTTGAAAAACAA...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTTCCAAACACACCATCTaGCTGGTGACTTCAAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCSKHTI*LVTSRQ Trigger: TTGTCTTGAAGTCACCAGCCAGATGGTGTGTTTGGA...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CAA 90 bp | CACATAGCATACATAGTGTTATTGTCAGAGCAAGAAACATACTATTaGTACAAAATGCAGTCAATCTTCACCAACGTCCAGAGCTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: HIAYIVLLSEQETYY*YKMQSIFTNVQSSH Trigger: ATGAGAGCTCTGGACGTTGGTGAAGATTGACTGCATTTTGTACAAATAGTATGTTTCTTGCTCTGACAATAACACTATGTATGCTATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CAA 90 bp | ACCAACACTCTGTTTTCTCCACTGAAATCACAGCATATTATTGATTaGATGATCTGTAATAGCATCATGGAACTGGGCAAAGTGGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: TNTLFSPLKSQHIID*MICNSIMELGKVVS Trigger: AGATACCACTTTGCCCAGTTCCATGATGCTATTACAGATCATCAAATCAATAATATGCTGTGATTTCAGTGGAGAAAACAGAGTGTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCACTATTTGTACAAAATaGAGTCAATCTTCACCAACG | + |
|
Preference number: 2 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFTICTK*SQSSPT Trigger: CGTTGGTGAAGATTGACTGCATTTTGTACAAATAGT...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTTTACAGTTACTAGAATaGAGGGAATGCTGGATACCT | + |
|
Preference number: 2 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCLQLLE*RECWIP Trigger: AGGTATCCAGCATTCCCTTCATTCTAGTAACTGTAA...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTGTACTTCCAGCATTGTaGCATATGATAGTTTGGATC | + |
|
Preference number: 2 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCVLPAL*HMIVWI Trigger: GATCCAAACTATCATATGCCACAATGCTGGAAGTAC...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CAA 90 bp | AAGTGTCTTGAATTAAGTACTTCCAGCATTGTGGCATATGATAGTTaGGATCTGTTTGGAAACTGCTTCCTTGATTTCCATTTTCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KCLELSTSSIVAYDS*DLFGNCFLDFHFLV Trigger: AACTAGAAAATGGAAATCAAGGAAGCAGTTTCCAAACAGATCCAAACTATCATATGCCACAATGCTGGAAGTACTTAATTCAAGACACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTACACCTTATTTCCCTTaGCATCTACCAAAACTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCTPYFP*HLPKLR Trigger: TCTTAGTTTTGGTAGATGCCAAGGGAAATAAGGTGT...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTGGACTTACATTTTGCTaGGTGAGGAATATTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCGLTFC*VRNISS Trigger: AGAAGAAATATTCCTCACCCAGCAAAATGTAAGTCC...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR GCA 72 bp | ACTGGGTCTCAATGTCTCACTGGGCATGACAGGAATTaGTGGAGCAGCCCTCATCCAAACACACCATCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGSQCLTGHDRN*WSSPHPNTPSG Trigger: GCCAGATGGTGTGTTTGGATGAGGGCTGCTCCAGCAATTCCTGTCATGCCCAGTGAGACATTGAGACCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCTCACCCTGTGTGTGTaGCCTAGAGGAAAGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGLTLCV*PRGKKT Trigger: AGTCTTCTTTCCTCTAGGCAACACACACAGGGTGAG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | TGCTCTTTGGACTGGGTCTCAATGTCTCACTGGGCATaGCAGGAATTGCTGGAGCAGCCCTCATCCAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: CSLDWVSMSHWA*QELLEQPSSKH Trigger: GTGTTTGGATGAGGGCTGCTCCAGCAATTCCTGTCATGCCCAGTGAGACATTGAGACCCAGTCCAAAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR GCA 72 bp | GACATCAATGACCTGGTGACTGCTGCTCAGGCCATGTaGTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: DINDLVTAAQAM*SPQASLSSLLM Trigger: CATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCAGTCACCAGGTCATTGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CCA 72 bp | TTGACTTCTTCCCCTCCTCGGTTCTATACTAGCCATTaGAGCCTTGCTTCTCCTGGCACCCTGCCTTATCCA | + |
|
Preference number: 3 (lower is better) Translates to: LTSSPPRFYTSH*SLASPGTLPYP Trigger: TGGATAAGGCAGGGTGCCAGGAGAAGCAAGGCTCCAATGGCTAGTATAGAACCGAGGAGGGGAAGAAGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCAAATCTTTTGGTAGCTaGACTTCTTCCCCTCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGKSFGS*TSSPPR Trigger: CCGAGGAGGGGAAGAAGTCAAGCTACCAAAAGATTT...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCTCCAGATATGGAGGTaGAAGATATTGGAGTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGLQIWR*KILELQ Trigger: CTGCAACTCCAATATCTTCAACCTCCATATCTGGAG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCACACCTTATTTCCCTaGGCATCTACCAAAACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGHTLFP*ASTKTK Trigger: CTTAGTTTTGGTAGATGCCAAGGGAAATAAGGTGTG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | AGGTTGAGTGAGCCCAGACCCTGCGAATATCAGAATTaGGAACTGCAGGAGTGGAGCCATTTCTTGTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: RLSEPRPCEYQN*ELQEWSHFLST Trigger: GGTAGACAAGAAATGGCTCCACTCCTGCAGTTCTCAATTCTGATATTCGCAGGGTCTGGGCTCACTCAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CCA 72 bp | GCCCAGCCTCTCCCTAGCCTTTCCAACACTTACCACTaGAAATTCTTCATTAGGGAGACCCACAAAGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: AQPLPSLSNTYH*KFFIRETHKGF Trigger: GAATCCTTTGTGGGTCTCCCTAATGAAGAATTTCCAGTGGTAAGTGTTGGAAAGGCTAGGGAGAGGCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCCTAGCCATTGGAGCCTaGCTTCTCCTGGCACCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFLAIGA*LLLAPC Trigger: GCAGGGTGCCAGGAGAAGCAAGGCTCCAATGGCTAG...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR GCA 72 bp | GTGAGCCCAGACCCTGCGAATATCAGAATTGAGAACTaGAGGAGTGGAGCCATTTCTTGTCTACCTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: VSPDPANIRIEN*RSGAISCLPLP Trigger: AGGTAAAGGTAGACAAGAAATGGCTCCACTCCTGCAGTTCTCAATTCTGATATTCGCAGGGTCTGGGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR GCA 72 bp | ATACTAGCCATTGGAGCCTTGCTTCTCCTGGCACCCTaGCTTATCCAACTTCTAAAACAGCAGATGAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILAIGALLLLAP*LIQLLKQQMSS Trigger: GCTACTCATCTGCTGTTTTAGAAGTTGGATAAGGCAGGGTGCCAGGAGAAGCAAGGCTCCAATGGCTAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCTCAAGGGTCTGTATTTaGGGTTACATGATGTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGSRVCI*GYMMLN Trigger: ATTCAACATCATGTAACCCAAAATACAGACCCTTGA...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCGAAGAACTGGTAAGGTaGAGTGAGCCCAGACCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFEELVR*SEPRPC Trigger: GCAGGGTCTGGGCTCACTCAACCTTACCAGTTCTTC...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR GCA 72 bp | GCTCAAAGATCTCCAGGAAGATCTCTGGGCACACTATaGTCCAACATCCCTACCCTATGGTACTCAAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: AQRSPGRSLGTL*SNIPTLWYSNL Trigger: AAGATTTGAGTACCATAGGGTAGGGATGTTGGAGCATAGTGTGCCCAGAGATCTTCCTGGAGATCTTTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | GAGTTGTTCTCCAAAACTGAAAGGCCCTGGACTTACTaGCTGTTAAACAGGGAGGGACTTACATTTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ELFSKTERPWTY*LLNREGLTFCW Trigger: CCAGCAAAATGTAAGTCCCTCCCTGTTTAACAGTCAGTAAGTCCAGGGCCTTTCAGTTTTGGAGAACAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | CAAGACAACTTCACCAGGAAATACTGCAAACAGCCTTaGGTCCCTTCAACGCCAGATAACTTCCTTAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QDNFTRKYCKQP*VPSTPDNFLSK Trigger: CTTGCTAAGGAAGTTATCTGGCGTTGAAGGGACTCAAGGCTGTTTGCAGTATTTCCTGGTGAAGTTGTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR GCA 72 bp | CCAGGACTGAGATTCCCTTACTCCAGCCCTTTCCTCTaGTTTCCTTACCAAAACATAGGTAAAATGCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PGLRFPYSSPFL*FPYQNIGKMPL Trigger: TAGAGGCATTTTACCTATGTTTTGGTAAGGAAAGCAGAGGAAAGGGCTGGAGTAAGGGAATCTCAGTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATACTGCGAATATCAGAATaGAGAACTGCAGGAGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QNIGKMPLGGLQIWRLKILRISE*RTAGVE Trigger: CTCCACTCCTGCAGTTCTCAATTCTGATATTCGCAG...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | ACCATGCCATTAGATAGAAGAACTGGTAAGGTTGAGTaGGCCCAGACCCTGCGAATATCAGAATTGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: TMPLDRRTGKVE*AQTLRISELRT Trigger: AGTTCTCAATTCTGATATTCGCAGGGTCTGGGCTCACTCAACCTTACCAGTTCTTCTATCTAATGGCATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | ATCCCTACCCTATGGTACTCAAATCTTTTGGTAGCTTaGCTTCTTCCCCTCCTCGGTTCTATACTAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: IPTLWYSNLLVA*LLPLLGSILAI Trigger: AATGGCTAGTATAGAACCGAGGAGGGGAAGAAGTCAAGCTACCAAAAGATTTGAGTACCATAGGGTAGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR GCA 72 bp | GGCCCTGTCTTTACTACCTCTCAATTCAAAACCTTCTaGTTACAATTGGGAAATTGCCCACCATACAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GPVFTTSQFKTF*LQLGNCPPYRD Trigger: ATCCCTGTATGGTGGGCAATTTCCCAATTGTAAGCAGAAGGTTTTGAATTGAGAGGTAGTAAAGACAGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATATGTGCACTGGAAAAGTaGAGGATCTGTCATCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QNIGKMPLGGLQIWRLKICALEK*RICHLL Trigger: AAGGAGATGACAGATCCTCAACTTTTCCAGTGCACA...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | ACTCCCTCTGAGATTACGAACTCTGGAGGCAGAAACTaGAGCAGAGACCATGACATAACATTAATTAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: TPSEITNSGGRN*SRDHDITLING Trigger: GCCATTAATTAATGTTATGTCATGGTCTCTGCTTCAGTTTCTGCCTCCAGAGTTCGTAATCTCAGAGGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CCA 72 bp | CGTGAGAGTGGCTTTTCTTGCACACCTTATTTCCCTTaGCATCTACCAAAACTAAGATGCTGTTGGAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: RESGFSCTPYFP*HLPKLRCCWNN Trigger: GTTATTCCAACAGCATCTTAGTTTTGGTAGATGCCAAGGGAAATAAGGTGTGCAAGAAAAGCCACTCTCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CCA 72 bp | CAAAACAAGTATGACAAGCCTTGTCTTAGTTCACTCTaGTTCAGTAGTCTGCTCTTTCCCCCTTTCTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QNKYDKPCLSSL*FSSLLFPPFLE Trigger: TTCCAAGAAAGGGGGAAAGAGCAGACTACTGAACCAGAGTGAACTAAGACAAGGCTTGTCATACTTGTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | TTGGCACACACTAAAATAATCCCTCCTATCCTAGTGTaGTGGTGTGATACCTTGGATGGAATTTGGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LAHTKIIPPILV*WCDTLDGIWKE Trigger: TTCCTTCCAAATTCCATCCAAGGTATCACACCATCACACTAGGATAGGAGGGATTATTTTAGTGTGTGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | CTTTGCCATTATGGGCATTCCCCAACAGATAAAAACTaGCAATGGCCCTGTCTTTACTACCTCTCAATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LCHYGHSPTDKN*QWPCLYYLSIQ Trigger: TTGAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAATGCCCATAATGGCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATAAATACCCCTTTCCCTTaGCCTTGTAGAATCATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QNIGKMPLGGLQIWRLKINTPFP*PCRIIL Trigger: AAGAATGATTCTACAAGGCAAAGGGAAAGGGGTATT...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACATAGGTAAAATGCCTCTAGGTGGCCTCCAGATATGGAGGTTGAAGATAAAGACATTCCTCTCTTaGAAATACCCCTTTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QNIGKMPLGGLQIWRLKIKTFLS*KYPFPF Trigger: AAAGGGAAAGGGGTATTTCAAAGAGAGGAATGTCTT...TATCTTCAACCTCCATATCTGGAGGCCACCTAGAGGCATTTTACCTATGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR TCA 72 bp | CCCCTTTCTTGGAAGTCTAGTTTACAGTTACTAGAATaGAGGGAATGCTGGATACCTCAGTTACATATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLSWKSSLQLLE*RECWIPQLHIL Trigger: CAGAATATGTAACTGAGGTATCCAGCATTCCCTTCATTCTAGTAACTGTAAACTAGACTTCCAAGAAAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR GCA 72 bp | GATGCTGTTGGAATAACCCTTTTCTCAACTGATGCATaGTGCTTATACACTTTTTCTCACATACCAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: DAVGITLFSTDA*CLYTFSHIPEP Trigger: TGGTTCTGGTATGTGAGAAAAAGTGTATAAGCAGCATGCATCAGTTGAGAAAAGGGTTATTCCAACAGCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CCA 72 bp | ACACTGTCAAGTGCCATCAAACATAAAACACACCACTaGCATTATACCAAGTGTCATTTGCATATAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLSSAIKHKTHH*HYTKCHLHISQ Trigger: CTGGCTTATATGCAAATGACACTTGGTATAATGCCAGTGGTGTGTTTTATGTTTGATGGCACTTGACAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR CCA 72 bp | TTACTACCTCTCAATTCAAAACCTTCTGCTTACAATTaGGAAATTGCCCACCATACAGGGATTTCCCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLPLNSKPSAYN*EIAHHTGISHN Trigger: ATTGTGGGAAATCCCTGTATGGTGGGCAATTTCCCAATTGTAAGCAGAAGGTTTTGAATTGAGAGGTAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCTGTTTTATTTCCATTTaGACACTGTCAAGTGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFCFISI*TLSSAI Trigger: GATGGCACTTGACAGTGTCAAAATGGAAATAAAACA...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCCAACAGATAAAAACTGACAATGGCCCTGTCTTTACTACCTCTCAATTCATAGTTTGGATCTGTTaGGAAACTGCTTCCTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: IPQQIKTDNGPVFTTSQFIVWIC*ETASLI Trigger: AATCAAGGAAGCAGTTTCCAAACAGATCCAAACTAT...GAATTGAGAGGTAGTAAAGACAGGGCCATTGTCAGTTTTTATCTGTTGGGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR TCA 72 bp | AAACTAAGATGCTGTTGGAATAACCCTTTTCTCAACTaGTGCATGCTGCTTATACACTTTTTCTCACATACC | + |
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Preference number: 3 (lower is better) Translates to: KLRCCWNNPFLN*CMLLIHFFSHT Trigger: GGTATGTGAGAAAAAGTGTATAAGCAGCATGCATCAGTTGAGAAAAGGGTTATTCCAACAGCATCTTAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR TCA 72 bp | CTTAACCACACCAAAATTACAAGACATTCCTCTCTTTaGAATACCCCTTTCCCTTTGCCTTGTAGAATCATT | + |
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Preference number: 3 (lower is better) Translates to: LNHTKITRHSSL*NTPFPLPCRII Trigger: AATGATTCTACAAGGCAAAGGGAAAGGGGTATTTCAAAGAGAGGAATGTCTTGTAATTTTGGTGTGGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR GCA 72 bp | TATTGTCAGAGCAAGAAACATACTATTTGTACAAAATaGAGTCAATCTTCACCAACGTCCAGAGCTCTCATA | + |
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Preference number: 3 (lower is better) Translates to: YCQSKKHTICTK*SQSSPTSRALI Trigger: TATGAGAGCTCTGGACGTTGGTGAAGATTGACTGCATTTTGTACAAATAGTATGTTTCTTGCTCTGACAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTGCATACATAGTGTTATaGTCAGAGCAAGAAACATAC | + |
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Preference number: 3 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCAYIVL*SEQETY Trigger: GTATGTTTCTTGCTCTGACAATAACACTATGTATGC...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTTCATCCAACATTTGGTaGAGTTTTCCAAACAATCCT | + |
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Preference number: 3 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCSSNIW*SFPNNP Trigger: AGGATTGTTTGGAAAACTCAACCAAATGTTGGATGA...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CCA 72 bp | AAAAATCTACAAACCAAGTCCTACAATGGAAAAATGTaGACATCAGTAGTCCCTTCTAGTTTCACAATGGAT | + |
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Preference number: 3 (lower is better) Translates to: KNLQTKSYNGKM*TSVVPSSFTMD Trigger: ATCCATTGTGAAACTAGAAGGGACTACTGATGTCCACATTTTTCCATTGTAGGACTTGGTTTGTAGATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR TCA 72 bp | TTACAGGAAATTATTAATGCTGTGCACTGGAAAAGTTaGGGATCTGTCATCTCCTTTTTAAAGTACACTTCA | + |
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Preference number: 3 (lower is better) Translates to: LQEIINAVHWKS*GSVISFLKYTS Trigger: TGAAGTGTACTTTAAAAAGGAGATGACAGATCCTCAACTTTTCCAGTGCACAGCATTAATAATTTCCTGTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR CCA 90 bp | TGCTGCTCAGGCCATGTGCTCTCCACAAGCTTCCCTCTCCTCTCTTCTTATGGCCTTACAACCCCCAAGTaGGAGCTGCAGGTAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: CCSGHVLSTSFPLLSSYGLTTPK*ELQVEK Trigger: CTTTTCTACCTGCAGCTCCCACTTGGGGGTTGTAAG...GCCATAAGAAGAGAGGAGAGGGAAGCTTGTGGAGAGCACATGGCCTGAGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR TCA 90 bp | GACGTGAGAGTGGCTTTTCTTGCACACCTTATTTCCCTTGGCATCTACCAAAACGAAGTCAGTCACTTCTaGGTGGTGAATGAAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: DVRVAFLAHLISLGIYQNEVSHF*VVNEVS Trigger: ACTGACTTCATTCACCACTCAGAAGTGACTGACTTC...GTTTTGGTAGATGCCAAGGGAAATAAGGTGTGCAAGAAAAGCCACTCTCACGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR TCA 90 bp | CCTTATTTCCCTTGGCATCTACCAAAACTAAGATGCTGTTGGAATAACCCTTTTTTTGGAGGATGGAACTaGCCCAGCCGCAGAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: PYFPWHLPKLRCCWNNPFFGGWN*PSRRDR Trigger: CCTATCTCTGCGGCTGGGTCAGTTCCATCCTCCAAA...AAAAGGGTTATTCCAACAGCATCTTAGTTTTGGTAGATGCCAAGGGAAATAAGG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 72 bp | CCAGATATGGAGGTTGAAGATATTGGAGTTGCAGAATaGAATCCACCAGCAGCAACATCACCATGTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: PDMEVEDIGVAE*NPPAATSPCSP Trigger: TGGTGAACATGGTGATGTTGCTGCTGGTGGATTCAATTCTGCAACTCCAATATCTTCAACCTCCATATCTGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 72 bp | CTACAAGAGCTCCAAACACTCTCCTATCTTCCTCCATaGGCACACACTAAAATAATCCCTCCTATCCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: LQELQTLSYLPP*AHTKIIPPILV Trigger: CACTAGGATAGGAGGGATTATTTTAGTGTGTGCCAATGGAGGAAGATAGGAGAGTGTTTGGAGCTCTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR TCA 90 bp | GACGTGAGAGTGGCTTTTCTTGCACACCTTATTTCCCTTGGCATCTACCAAAACGATTATTTGGAGGTGTaGGATACACAAAGGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: DVRVAFLAHLISLGIYQNDYLEV*DTQRKQ Trigger: CTGTTTCCTTTGTGTATCTCACACCTCCAAATAATC...GTTTTGGTAGATGCCAAGGGAAATAAGGTGTGCAAGAAAAGCCACTCTCACGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR TCA 90 bp | GACGTGAGAGTGGCTTTTCTTGCACACCTTATTTCCCTTGGCATCTACCAAAACAGGCTTCTGTTACCATaGAAAGTGCATAAAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: DVRVAFLAHLISLGIYQNRLLLP*KVHKGK Trigger: TTTTCCTTTATGCACTTTTCATGGTAACAGAAGCCT...GTTTTGGTAGATGCCAAGGGAAATAAGGTGTGCAAGAAAAGCCACTCTCACGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR CCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTGAACCAGCCACCAACTaGACACAGACACTCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCEPATN*TQTLLD Trigger: GTCAAGGAGTGTCTGTGTCCAGTTGGTGGCTGGTTC...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 72 bp | GATTCAACAAAATCATACAAACTCAGGATTTCCCACTaGAAGGATGTCAGACCAGGACTGAGATTCCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: DSTKSYKLRISH*KDVRPGLRFPY Trigger: GTAAGGGAATCTCAGTCCTGGTCTGACATCCTTCAAGTGGGAAATCCTGAGTTTGTATGATTTTGTTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR GCA 90 bp | GACGTGAGAGTGGCTTTTCTTGCACACCTTATTTCCCTTGGCATCTACCAAAACTGTTACCATGAAAAGTaGATAAAGGAAAAGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: DVRVAFLAHLISLGIYQNCYHEK*IKEKLS Trigger: GCTCAACTTTTCCTTTATGCACTTTTCATGGTAACA...GTTTTGGTAGATGCCAAGGGAAATAAGGTGTGCAAGAAAAGCCACTCTCACGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR CCA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTAGAAAAAGGACACTGTaGAGCTCTGGACGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCRKRTL*SSGRTL Trigger: CAGAGTCCGTCCAGAGCTCCACAGTGTCCTTTTTCT...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR CCA 90 bp | GACGTGAGAGTGGCTTTTCTTGCACACCTTATTTCCCTTGGCATCTACCAAAACAACCCACAAAGGATATaGTCTTTTTCTGAGATAAGA | + |
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Preference number: 4 (lower is better) Translates to: DVRVAFLAHLISLGIYQNNPQRI*SFSEIR Trigger: TCTTATCTCAGAAAAAGACCATATCCTTTGTGGGTT...GTTTTGGTAGATGCCAAGGGAAATAAGGTGTGCAAGAAAAGCCACTCTCACGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR CCA 90 bp | GACGTGAGAGTGGCTTTTCTTGCACACCTTATTTCCCTTGGCATCTACCAAAACGGAGATCTTTTCGATTaGATTAGAATCACAGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: DVRVAFLAHLISLGIYQNGDLFD*IRITVE Trigger: TTCTACTGTGATTCTAATCCAATCGAAAAGATCTCC...GTTTTGGTAGATGCCAAGGGAAATAAGGTGTGCAAGAAAAGCCACTCTCACGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR CCA 90 bp | CCTTATTTCCCTTGGCATCTACCAAAACTAAGATGCTGTTGGAATAACCCTTTTTCAGTTACTTCTGAGTaGTTGTCTCTCTCCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PYFPWHLPKLRCCWNNPFSVTSE*LSLSLS Trigger: TGACAAGGAGAGAGACAACCACTCAGAAGTAACTGA...AAAAGGGTTATTCCAACAGCATCTTAGTTTTGGTAGATGCCAAGGGAAATAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 72 bp | AAAGCAAGTGAGTCTTGGTATGATCTCATCCAACATTaGGTTGAGTTTTCCAAACAATCCTCAATAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: KASESWYDLIQH*VEFSKQSSINH Trigger: GTGGTTTATTGAGGATTGTTTGGAAAACTCAACCAAATGTTGGATGAGATCATACCAAGACTCACTTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 72 bp | GAATTAAGTACTTCCAGCATTGTGGCATATGATAGTTaGGATCTGTTTGGAAACTGCTTCCTTGATTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: ELSTSSIVAYDS*DLFGNCFLDFH Trigger: ATGGAAATCAAGGAAGCAGTTTCCAAACAGATCCAAACTATCATATGCCACAATGCTGGAAGTACTTAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 72 bp | TACATAGTGTTATTGTCAGAGCAAGAAACATACTATTaGTACAAAATGCAGTCAATCTTCACCAACGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: YIVLLSEQETYY*YKMQSIFTNVQ Trigger: CTGGACGTTGGTGAAGATTGACTGCATTTTGTACAAATAGTATGTTTCTTGCTCTGACAATAACACTATGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| 3UTR CAA 72 bp | CACAAAGTCAACATGGTACAAAAACATCTCCATAATTaGTCCATCCTGTCACACAGAAACTTTACACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: HKVNMVQKHLHN*SILSHRNFTPY Trigger: ATAAGGTGTAAAGTTTCTGTGTGACAGGATGGACAAATTATGGAGATGTTTTTGTACCATGTTGACTTTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS-3UTR CAA 90 bp | GACGTGAGAGTGGCTTTTCTTGCACACCTTATTTCCCTTGGCATCTACCAAAACGTTACTTCTGAGTGGTaGTCTCTCTCCTTGTCACCC | + |
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Preference number: 5 (lower is better) Translates to: DVRVAFLAHLISLGIYQNVTSEW*SLSLSP Trigger: GGGTGACAAGGAGAGAGACAACCACTCAGAAGTAAC...GTTTTGGTAGATGCCAAGGGAAATAAGGTGTGCAAGAAAAGCCACTCTCACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS TCA 90 bp | CGGACTCTGATGCCTACAAGAATGAAGTCAGTCACTTCTGAGTGGTaGATGAAGTCAGTTACTTCTGAGTGGTTGTCTCTCTCCTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: RTLMPTRMKSVTSEW*MKSVTSEWLSLSLS Trigger: TGACAAGGAGAGAGACAACCACTCAGAAGTAACTGACTTCATTCACCACTCAGAAGTGACTGACTTCATTCTTGTAGGCATCAGAGTCCG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058123.6 ENSMUST00000213568.2 |
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| CDS-3UTR CAA 90 bp | GAAAATGTCCAACAAACTTGTTTACAGACCCATCTGATGAAGGTTTTTGTTTGTGAATGTTACACTGATTaGGAGGATGGAACTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: ENVQQTCLQTHLMKVFVCECYTD*EDGTDP Trigger: TGGGTCAGTTCCATCCTCCAAATCAGTGTAACATTC...ACAAACAAAAACCTTCATCAGATGGGTCTGTAAACAAGTTTGTTGGACATTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213568.2 |
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| CDS TCA 90 bp | AACATACTGAAGCAATTTTACGAAGTTCAGGATTATTTGGAGGTGTaGGATACACAAAGGAAACAGTCCCATAAAGCAAACTTACAACCC | + |
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Preference number: 5 (lower is better) Translates to: NILKQFYEVQDYLEV*DTQRKQSHKANLQP Trigger: GGGTTGTAAGTTTGCTTTATGGGACTGTTTCCTTTGTGTATCTCACACCTCCAAATAATCCTGAACTTCGTAAAATTGCTTCAGTATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058123.6 ENSMUST00000213568.2 |
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| CDS TCA 72 bp | ATGCCTACAAGAATGAAGTCAGTCACTTCTGAGTGGTaGATGAAGTCAGTTACTTCTGAGTGGTTGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: MPTRMKSVTSEW*MKSVTSEWLSL Trigger: GAGAGACAACCACTCAGAAGTAACTGACTTCATTCACCACTCAGAAGTGACTGACTTCATTCTTGTAGGCAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058123.6 ENSMUST00000213568.2 |
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| CDS TCA 72 bp | AAGCAATTTTACGAAGTTCAGGATTATTTGGAGGTGTaGGATACACAAAGGAAACAGTCCCATAAAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: KQFYEVQDYLEV*DTQRKQSHKAN Trigger: GTTTGCTTTATGGGACTGTTTCCTTTGTGTATCTCACACCTCCAAATAATCCTGAACTTCGTAAAATTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058123.6 ENSMUST00000213568.2 |
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