Pregenerated sensors for OLFR825 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058084Ensembl transcript IDs: ENSMUST00000216530.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGCTTGGGTaGAAATATCTGCATCTGACTCAGCTGCTTGTGGGTATTTCGGAG | + |
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Preference number: 1 (lower is better) Translates to: PNSTTGVSCFCPLLG*KYLHLTQLLVGISE Trigger: CTCCGAAATACCCACAAGCAGCTGAGTCAGATGCAGATATTTGCACCCAAGCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR TCA 90 bp | ATTATCTCTGCTTACCAACCATCAGCTCTAGGTCACCTCATAGTGTaGCCTAAAGAGCATCTTTGGCATCCAGCATCTTTGGCATACAGC | + |
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Preference number: 1 (lower is better) Translates to: IISAYQPSALGHLIV*PKEHLWHPASLAYS Trigger: GCTGTATGCCAAAGATGCTGGATGCCAAAGATGCTCTTTAGGTCACACTATGAGGTGACCTAGAGCTGATGGTTGGTAAGCAGAGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR TCA 90 bp | TCTTTGGCATCCAGCATCTTTGGCATACAGCCTTTGGCATTTAATTaGCTGCCCAGAGATTTAGCTCATATACTATTCTGTGAATACCCC | + |
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Preference number: 1 (lower is better) Translates to: SLASSIFGIQPLAFN*LPRDLAHILFCEYP Trigger: GGGGTATTCACAGAATAGTATATGAGCTAAATCTCTGGGCAGTCAATTAAATGCCAAAGGCTGTATGCCAAAGATGCTGGATGCCAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR TCA 90 bp | ACCCCACTGATAATTAACACAAAGCATTACTATGAAGGATCAAACTaGGGTAATGAATATTCAATACTTGCCAGTGATCTTCTAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: TPLIINTKHYYEGSN*GNEYSILASDLLAW Trigger: CCAAGCTAGAAGATCACTGGCAAGTATTGAATATTCATTACCTCAGTTTGATCCTTCATAGTAATGCTTTGTGTTAATTATCAGTGGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CAA 90 bp | GCTCTCCATAGCCTCAGTAATACTGTCAGGCCTTGGGACCTCCCCTaGAGCTGGATCCCACTTTGGGCCTGTGGCTGGGCCTTCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: ALHSLSNTVRPWDLP*SWIPLWACGWAFFS Trigger: GGAAAAGAAGGCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTGACAGTATTACTGAGGCTATGGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCCTTGGGACCTCCCCTTGAGCTGGATCCCACTTTGGGCCTGTGGCTGGGCCCTTTGGCATTTAATTaGCTGCCCAGAGATTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: QALGPPLELDPTLGLWLGPLAFN*LPRDLA Trigger: AGCTAAATCTCTGGGCAGTCAATTAAATGCCAAAGG...GCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR CCA 90 bp | GAACACAAACCCGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCGACCTCCCCTTGAGCTaGATCCCACTTTGGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: EHKPGSPLLYVCWGPHISDLPLS*IPLWAC Trigger: ACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTC...GCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCGGGTTTGTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGGGGTCAGCTGCTTCTGTCCATTGCTTGGGTGCAAATATCTGCATCTGACCCCACTTTGGGCCTGTaGCTGGGCCTTCTTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: NRGQLLLSIAWVQISASDPTLGL*LGLLFL Trigger: GAGGAAAAGAAGGCCCAGCCACAGGCCCAAAGTGGG...GTCAGATGCAGATATTTGCACCCAAGCAATGGACAGAAGCAGCTGACCCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGCTTAGCTGGATCCCACTTTaGGCCTGTGGCTGGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSAFPNSTTGVSCFCPLLSWIPL*ACGWAF Trigger: GAAGGCCCAGCCACAGGCCCAAAGTGGGATCCAGCT...AAGCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CAA 90 bp | TCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATaGCTTGGGTGCAAATATCTGCATCTGACTCAGCTGCTTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SAFPNSTTGVSCFCP*LGCKYLHLTQLLVG Trigger: ACCCACAAGCAGCTGAGTCAGATGCAGATATTTGCACCCAAGCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGGGGTCAGCTGCTTCTGTCCATTGCTTGGGTGCAAATATCTGCATCTGACGGCATCCAGCATCTTTaGCATACAGCCTTTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: NRGQLLLSIAWVQISASDGIQHL*HTAFGI Trigger: AATGCCAAAGGCTGTATGCCAAAGATGCTGGATGCC...GTCAGATGCAGATATTTGCACCCAAGCAATGGACAGAAGCAGCTGACCCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCCGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTCCCCAAAGAATGAAGTaGTTCATTCCTATGCCTATC | + |
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Preference number: 2 (lower is better) Translates to: KPGSPLLYVCWGPHISWCPQRMK*FIPMPI Trigger: GATAGGCATAGGAATGAATCACTTCATTCTTTGGGG...ACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCGGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTACAGGATCTCTCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAAAGACAGGATATCAAGTaGGGGATGGGGTTGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: SYRISLLLSFFQPSLIQQRQDIK*GMGLPS Trigger: GGATGGCAACCCCATCCCTCACTTGATATCCTGTCT...TTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGAGAGATCCTGTAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCCGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTTTGGCATACAGCCTTTaGCATTTAATTGACTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: KPGSPLLYVCWGPHISWCLAYSL*HLIDCP Trigger: TGGGCAGTCAATTAAATGCCAAAGGCTGTATGCCAA...ACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCGGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTGTGGCTGGGCCTTCTTTTCCTCAGGCTCCTCTCCATTTTCATCCCTATGAACTCCACAATGAATaGCATTCTCAGAGAAAATTT | + |
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Preference number: 2 (lower is better) Translates to: GPVAGPSFPQAPLHFHPYELHNE*HSQRKF Trigger: AAATTTTCTCTGAGAATGCCATTCATTGTGGAGTTC...ATAGGGATGAAAATGGAGAGGAGCCTGAGGAAAAGAAGGCCCAGCCACAGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGCTTTCACAGAGCAATAGGTaGGGACATTTTAGAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: LSAFPNSTTGVSCFCPLLSQSNR*GHFRKH Trigger: ATGTTTTCTAAAATGTCCCCACCTATTGCTCTGTGA...AAGCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR TCA 72 bp | GCCTCAGTAATACTGTCAGGCCTTGGGACCTCCCCTTaGGCTGGATCCCACTTTGGGCCTGTGGCTGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: ASVILSGLGTSP*AGSHFGPVAGP Trigger: AGGCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTGACAGTATTACTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CCA 72 bp | GGACCTCCCCTTGAGCTGGATCCCACTTTGGGCCTGTaGCTGGGCCTTCTTTTCCTCAGGCTCCTCTCCATT | + |
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Preference number: 3 (lower is better) Translates to: GPPLELDPTLGL*LGLLFLRLLSI Trigger: AATGGAGAGGAGCCTGAGGAAAAGAAGGCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CCA 72 bp | AGTAATACTGTCAGGCCTTGGGACCTCCCCTTGAGCTaGATCCCACTTTGGGCCTGTGGCTGGGCCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: SNTVRPWDLPLS*IPLWACGWAFF Trigger: AAAGAAGGCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTGACAGTATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CCA 72 bp | TTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGCTTaGGTGCAAATATCTGCATCTGACTCAGCTGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: FNNRGQLLLSIA*VQISASDSAAC Trigger: ACAAGCAGCTGAGTCAGATGCAGATATTTGCACCCAAGCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR TCA 72 bp | GCTTACCAACCATCAGCTCTAGGTCACCTCATAGTGTaGCCTAAAGAGCATCTTTGGCATCCAGCATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: AYQPSALGHLIV*PKEHLWHPASL Trigger: CAAAGATGCTGGATGCCAAAGATGCTCTTTAGGTCACACTATGAGGTGACCTAGAGCTGATGGTTGGTAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR GCA 72 bp | AGAAAGGAAGACAGGATATCAAGTGAGGGATGGGGTTaGCATCCCACAATCACATCTCTGATCCATAAATCC | + |
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Preference number: 3 (lower is better) Translates to: RKEDRISSEGWG*HPTITSLIHKS Trigger: GGATTTATGGATCAGAGATGTGATTGTGGGATGGCAACCCCATCCCTCACTTGATATCCTGTCTTCCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR GCA 72 bp | TGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATaGTGTCTGTTTGGTTGTCCAGTGTTTGAGAAATCT | + |
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Preference number: 3 (lower is better) Translates to: CMCVGGLISAGV*CLFGCPVFEKS Trigger: AGATTTCTCAAACACTGGACAACCAAACAGACAGCATACACCAGCTGATATGAGGCCCCCAACACACATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CCA 72 bp | TCTTTCAGAAAGGAAGACAGGATATCAAGTGAGGGATaGGGTTGCCATCCCACAATCACATCTCTGATCCAT | + |
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Preference number: 3 (lower is better) Translates to: SFRKEDRISSEG*GCHPTITSLIH Trigger: ATGGATCAGAGATGTGATTGTGGGATGGCAACCCCATCCCTCACTTGATATCCTGTCTTCCTTTCTGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTGGGGGCCTCATATCAGCTGGTGTATGCTGTCTGTTTGGTTGTCCAGTGTTATTCAGATTTATATTTaGTGTGGCCCAAAGAACTCC | + |
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Preference number: 3 (lower is better) Translates to: CWGPHISWCMLSVWLSSVIQIYI*CGPKNS Trigger: GGAGTTCTTTGGGCCACACAAAATATAAATCTGAAT...AACACTGGACAACCAAACAGACAGCATACACCAGCTGATATGAGGCCCCCAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR TCA 72 bp | TCCAGCATCTTTGGCATACAGCCTTTGGCATTTAATTaGCTGCCCAGAGATTTAGCTCATATACTATTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SSIFGIQPLAFN*LPRDLAHILFC Trigger: ACAGAATAGTATATGAGCTAAATCTCTGGGCAGTCAATTAAATGCCAAAGGCTGTATGCCAAAGATGCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR TCA 72 bp | TTAGCTCATATACTATTCTGTGAATACCCCAAAGAATaGAGTGATTCATTCCTATGCCTATCACAATACCAA | + |
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Preference number: 3 (lower is better) Translates to: LAHILFCEYPKE*SDSFLCLSQYQ Trigger: TTGGTATTGTGATAGGCATAGGAATGAATCACTTCATTCTTTGGGGTATTCACAGAATAGTATATGAGCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCTTGGGACCTCCCCTTGAGCTGGATCCCACTTTGGGCCTGTGGCTGGGCCTCACGACACCCAGGTaGGAGCTGCAAGTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QALGPPLELDPTLGLWLGLTTPR*ELQVEK Trigger: CTTCTCCACTTGCAGCTCTCACCTGGGTGTCGTGAG...GCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CAA 72 bp | CAGGCCTTGGGACCTCCCCTTGAGCTGGATCCCACTTaGGGCCTGTGGCTGGGCCTTCTTTTCCTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QALGPPLELDPT*GLWLGLLFLRL Trigger: GAGCCTGAGGAAAAGAAGGCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCTTGGGACCTCCCCTTGAGCTGGATCCCACTTTGGGCCTGTGGCTGGGCGAACAGGAGAGTCTCTaGAGTGGCCGACTATCACAG | + |
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Preference number: 4 (lower is better) Translates to: QALGPPLELDPTLGLWLGEQESL*SGRLSQ Trigger: CTGTGATAGTCGGCCACTTCAGAGACTCTCCTGTTC...GCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CAA 72 bp | AGCCTCAGTAATACTGTCAGGCCTTGGGACCTCCCCTaGAGCTGGATCCCACTTTGGGCCTGTGGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLSNTVRPWDLP*SWIPLWACGWA Trigger: GGCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTGACAGTATTACTGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCTTGGGACCTCCCCTTGAGCTGGATCCCACTTTGGGCCTGTGGCTGGGCCACACAGCCTGCAAATaGGATAGACTTGCTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QALGPPLELDPTLGLWLGHTACK*DRLALC Trigger: ACAGAGAGCAAGTCTATCTCATTTGCAGGCTGTGTG...GCCCAGCCACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTCCCAAGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR TCA 90 bp | AAACCCGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTAGTAGAAGAGGTCGATaGAGGAGAGGTTGCCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: KPGSPLLYVCWGPHISWCSRRGR*RRGCLG Trigger: TCCTAGGCAACCTCTCCTTCATCGACCTCTTCTACT...ACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCGGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR GCA 90 bp | CTTGTGGGTATTTCGGAGGGCAGTCATGATAGATCTCTTTTTGTGAGCTCTCCACTGCCACCAGCTGAGTaGAGAGACGTGTGGACATGT | + |
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Preference number: 4 (lower is better) Translates to: LVGISEGSHDRSLFVSSPLPPAE*RDVWTC Trigger: ACATGTCCACACGTCTCTGCACTCAGCTGGTGGCAG...TGGAGAGCTCACAAAAAGAGATCTATCATGACTGCCCTCCGAAATACCCACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR GCA 90 bp | AAACCCGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTAGCCACAATGAACAGTaGAAAGAGAAAGATCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KPGSPLLYVCWGPHISWCSHNEQ*KEKDLG Trigger: GCCCAGATCTTTCTCTTTGCACTGTTCATTGTGGCT...ACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCGGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| 3UTR CAA 72 bp | CCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATaGCTTGGGTGCAAATATCTGCATCTGACTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNSTTGVSCFCP*LGCKYLHLTQL Trigger: CAGCTGAGTCAGATGCAGATATTTGCACCCAAGCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR CCA 90 bp | AACAGGGGTCAGCTGCTTCTGTCCATTGCTTGGGTGCAAATATCTGCATCTGACGGAGAGTCTCTGAAGTaGCCGACTATCACAGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: NRGQLLLSIAWVQISASDGESLK*PTITVK Trigger: TTTTACTGTGATAGTCGGCCACTTCAGAGACTCTCC...GTCAGATGCAGATATTTGCACCCAAGCAATGGACAGAAGCAGCTGACCCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR TCA 90 bp | AACAGGGGTCAGCTGCTTCTGTCCATTGCTTGGGTGCAAATATCTGCATCTGACTCTGGAGAACAGAGCTaGTACAGCCACAAAAATAAG | + |
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Preference number: 4 (lower is better) Translates to: NRGQLLLSIAWVQISASDSGEQS*YSHKNK Trigger: CTTATTTTTGTGGCTGTATCAGCTCTGTTCTCCAGA...GTCAGATGCAGATATTTGCACCCAAGCAATGGACAGAAGCAGCTGACCCCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR TCA 90 bp | AAACCCGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTAAAGTCAGTCATATCTaGATGATTGCTTGTTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: KPGSPLLYVCWGPHISWCKVSHI*MIACFP Trigger: AGGGAAACAAGCAATCATTCAGATATGACTGACTTT...ACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR GCA 90 bp | CTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGCTTTCATATCTGAATGATTaGTTGTTTCCCTGTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSAFPNSTTGVSCFCPLLSYLND*LFPCRP Trigger: TGGGCGACAGGGAAACAAGCAATCATTCAGATATGA...AAGCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR TCA 90 bp | TCCTACAGGATCTCTCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAAATCCTTCAGCCACAATaGACAGTGCAAAGAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SYRISLLLSFFQPSLIQQILQPQ*TVQRER Trigger: TCTTTCTCTTTGCACTGTTCATTGTGGCTGAAGGAT...TTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGAGAGATCCTGTAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR GCA 90 bp | CTCATATACTATTCTGTGAATACCCCAAAGAATGAAGTGATTCATTCCTATGCCACAAAAATAAGAGCCTaGCACCAGCTGAGTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LIYYSVNTPKNEVIHSYATKIRA*HQLSAE Trigger: CTCTGCACTCAGCTGGTGGCAGGCTCTTATTTTTGT...GGCATAGGAATGAATCACTTCATTCTTTGGGGTATTCACAGAATAGTATATGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR CAA 90 bp | GGGCCTGTGGCTGGGCCTTCTTTTCCTCAGGCTCCTCTCCATTTTCATCCCTATCTCTCTGTCCAAAAGTaGCTCATAGCCTTTGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GPVAGPSFPQAPLHFHPYLSVQK*LIAFGA Trigger: TGCACCAAAGGCTATGAGCAACTTTTGGACAGAGAG...ATAGGGATGAAAATGGAGAGGAGCCTGAGGAAAAGAAGGCCCAGCCACAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR CAA 90 bp | GAACACAAACCCGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCGAATACAGGAGTGGGTaGCAGATGGCAATGAAACGG | + |
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Preference number: 5 (lower is better) Translates to: EHKPGSPLLYVCWGPHISEYRSG*QMAMKR Trigger: CCGTTTCATTGCCATCTGCAACCCACTCCTGTATTC...GCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCGGGTTTGTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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| CDS-3UTR CAA 90 bp | CTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGCTTGCAAATGAGATAGACTaGCTCTCTGTCCAAAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LSAFPNSTTGVSCFCPLLANEID*LSVQKL Trigger: CAACTTTTGGACAGAGAGCAAGTCTATCTCATTTGC...AAGCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216530.2 |
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