Pregenerated sensors for OLFR820 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048745Ensembl transcript IDs: ENSMUST00000059244.3, ENSMUST00000214917.2, ENSMUST00000215791.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTAAATGTGAATTTAAGGGTCGTTTTCCTCAGTGCTGTGACTCCTaGCTGGAAGTCCATGCATCAGAGGATGGACTTGCACTAATACAT | + |
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Preference number: 1 (lower is better) Translates to: SKCEFKGRFPQCCDS*LEVHASEDGLALIH Trigger: ATGTATTAGTGCAAGTCCATCCTCTGATGCATGGACTTCCAGTCAGGAGTCACAGCACTGAGGAAAACGACCCTTAAATTCACATTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| 3UTR TCA 90 bp | GAGGTGGTTCTGTATTTAAGAGAACTGTCTGCTTTTGCAGAGGCCTaGTATTCAATTTCCAACATCCACATTATATCTCACAAACCATCT | + |
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Preference number: 1 (lower is better) Translates to: EVVLYLRELSAFAEA*YSISNIHIISHKPS Trigger: AGATGGTTTGTGAGATATAATGTGGATGTTGGAAATTGAATATCAGGCCTCTGCAAAAGCAGACAGTTCTCTTAAATACAGAACCACCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCCTCAGTGCTGTGACTCCTGACTGGAAGTCCATGCATCAGAGGATGGACGCTTTTGCAGAGGCCTaGTATTCAATTTCCAACATC | + |
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Preference number: 2 (lower is better) Translates to: VFLSAVTPDWKSMHQRMDAFAEA*YSISNI Trigger: GATGTTGGAAATTGAATATCAGGCCTCTGCAAAAGC...GTCCATCCTCTGATGCATGGACTTCCAGTCAGGAGTCACAGCACTGAGGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCAGAGGCCTGATATTCAATTTCCAACATCCACATTATATCTCACAAACCGGAGCTAGTATGGCCTaGCCACACAGACATGTCACC | + |
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Preference number: 2 (lower is better) Translates to: FCRGLIFNFQHPHYISQTGASMA*PHRHVT Trigger: GGTGACATGTCTGTGTGGCCAGGCCATACTAGCTCC...GGTTTGTGAGATATAATGTGGATGTTGGAAATTGAATATCAGGCCTCTGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCAGAGGCCTGATATTCAATTTCCAACATCCACATTATATCTCACAAACCTCTGACGTCCTCTTCTaGCCTCAGTGTGTTCGAAGT | + |
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Preference number: 2 (lower is better) Translates to: FCRGLIFNFQHPHYISQTSDVLF*PQCVRS Trigger: ACTTCGAACACACTGAGGCCAGAAGAGGACGTCAGA...GGTTTGTGAGATATAATGTGGATGTTGGAAATTGAATATCAGGCCTCTGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCCTCAGTGCTGTGACTCCTGACTGGAAGTCCATGCATCAGAGGATGGACGAGAACTGTCTGCTTTaGCAGAGGCCTGATATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VFLSAVTPDWKSMHQRMDENCLL*QRPDIQ Trigger: TTGAATATCAGGCCTCTGCAAAAGCAGACAGTTCTC...GTCCATCCTCTGATGCATGGACTTCCAGTCAGGAGTCACAGCACTGAGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| 3UTR GCA 72 bp | CTCCTGACTGGAAGTCCATGCATCAGAGGATGGACTTaGACTAATACATGTACTGGCCACACAAAATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LLTGSPCIRGWT*TNTCTGHTKWT Trigger: AGTCCATTTTGTGTGGCCAGTACATGTATTAGTGCAAGTCCATCCTCTGATGCATGGACTTCCAGTCAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCCTCAGTGCTGTGACTCCTGACTGGAAGTCCATGCATCAGAGGATGGACAGGGCTTACTTTCTCTaGTGTGTATTTAAAGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: VFLSAVTPDWKSMHQRMDRAYFL*CVFKGL Trigger: CAATCCTTTAAATACACACAAGAGAAAGTAAGCCCT...GTCCATCCTCTGATGCATGGACTTCCAGTCAGGAGTCACAGCACTGAGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| 3UTR CCA 72 bp | TGGCCTCAGTGTGTTCGAAGTATGCATAATCCACACTaGATAAAGTTTGGTTCAACATACCTCAGTAACCAG | + |
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Preference number: 3 (lower is better) Translates to: WPQCVRSMHNPH*IKFGSTYLSNQ Trigger: CTGGTTACTGAGGTATGTTGAACCAAACTTTATCCAGTGTGGATTATGCATACTTCGAACACACTGAGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CCA 90 bp | GTTTTCCTCAGTGCTGTGACTCCTGACTGGAAGTCCATGCATCAGAGGATGGACGCAGCCAGGAGGAACTaGATCACTTCTATGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFLSAVTPDWKSMHQRMDAARRN*ITSMKC Trigger: ACACTTCATAGAAGTGATCCAGTTCCTCCTGGCTGC...GTCCATCCTCTGATGCATGGACTTCCAGTCAGGAGTCACAGCACTGAGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR TCA 90 bp | GTTTTCCTCAGTGCTGTGACTCCTGACTGGAAGTCCATGCATCAGAGGATGGACACTGGATCACTTCTATaGAGTGTGTGTCTGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: VFLSAVTPDWKSMHQRMDTGSLL*SVCLNM Trigger: CATGTTCAGACACACACTTCATAGAAGTGATCCAGT...GTCCATCCTCTGATGCATGGACTTCCAGTCAGGAGTCACAGCACTGAGGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR TCA 90 bp | GGTATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAGCACAGAAAGGCAACTaGAGAGTCATTGCATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GMCDCSVLNLYYLSTKPQAQKGN*RVIACG Trigger: GCCACATGCAATGACTCTTCAGTTGCCTTTCTGTGC...TTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CCA 90 bp | GGTATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAGCAGCCAGGAGGAACTaGATCACTTCTATGAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: GMCDCSVLNLYYLSTKPQAARRN*ITSMKC Trigger: ACACTTCATAGAAGTGATCCAGTTCCTCCTGGCTGC...TTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR GCA 90 bp | GGTATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAGAGGTAAAATTCGGTTaGTCCCAGAAGGATTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: GMCDCSVLNLYYLSTKPQEVKFG*SQKDCE Trigger: TTCGCAATCCTTCTGGGAGCAACCGAATTTTACCTC...TTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR GCA 90 bp | TTTTGCAGAGGCCTGATATTCAATTTCCAACATCCACATTATATCTCACAAACCGAGGTAAAATTCGGTTaGTCCCAGAAGGATTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: FCRGLIFNFQHPHYISQTEVKFG*SQKDCE Trigger: TTCGCAATCCTTCTGGGAGCAACCGAATTTTACCTC...GGTTTGTGAGATATAATGTGGATGTTGGAAATTGAATATCAGGCCTCTGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR GCA 90 bp | TTTTGCAGAGGCCTGATATTCAATTTCCAACATCCACATTATATCTCACAAACCCAACTGAAGAGTCATTaGATGTGGCACAGCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: FCRGLIFNFQHPHYISQTQLKSH*MWHSNN Trigger: GTTGTTGCTGTGCCACATGCAATGACTCTTCAGTTG...GGTTTGTGAGATATAATGTGGATGTTGGAAATTGAATATCAGGCCTCTGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CCA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTGCAGCCAGGAGGAACTaGATCACTTCTATGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVAARRN*ITSMKC Trigger: ACACTTCATAGAAGTGATCCAGTTCCTCCTGGCTGC...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR GCA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTCAACTGAAGAGTCATTaGATGTGGCACAGCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVQLKSH*MWHSNN Trigger: GTTGTTGCTGTGCCACATGCAATGACTCTTCAGTTG...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGACAACTGAAGAGTCATTaGATGTGGCACAGCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRQLKSH*MWHSNN Trigger: GTTGTTGCTGTGCCACATGCAATGACTCTTCAGTTG...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CCA 90 bp | TTTTGCAGAGGCCTGATATTCAATTTCCAACATCCACATTATATCTCACAAACCGAACTTAAAACTAGTTaGAAGCAAAGTCTCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FCRGLIFNFQHPHYISQTELKTS*KQSLRL Trigger: GAGCCGGAGACTTTGCTTCCAACTAGTTTTAAGTTC...GGTTTGTGAGATATAATGTGGATGTTGGAAATTGAATATCAGGCCTCTGCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR TCA 90 bp | GGTATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAACTCCAGTTCCAATATTaGTTAGCATCTTGGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: GMCDCSVLNLYYLSTKPQLQFQY*LASWEQ Trigger: TTGTTCCCAAGATGCTAATCAATATTGGAACTGGAG...TTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAACTGGATCACTTCTATaGAGTGTGTGTCTGAACATG | + |
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Preference number: 4 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRTGSLL*SVCLNM Trigger: CATGTTCAGACACACACTTCATAGAAGTGATCCAGT...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR TCA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTACTGGATCACTTCTATaGAGTGTGTGTCTGAACATG | + |
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Preference number: 4 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVTGSLL*SVCLNM Trigger: CATGTTCAGACACACACTTCATAGAAGTGATCCAGT...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CCA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTGAACTTAAAACTAGTTaGAAGCAAAGTCTCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVELKTS*KQSLRL Trigger: GAGCCGGAGACTTTGCTTCCAACTAGTTTTAAGTTC...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CCA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGAACTTAAAACTAGTTaGAAGCAAAGTCTCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRELKTS*KQSLRL Trigger: GAGCCGGAGACTTTGCTTCCAACTAGTTTTAAGTTC...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGACTCCAGTTCCAATATTaGTTAGCATCTTGGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRLQFQY*LASWEQ Trigger: TTGTTCCCAAGATGCTAATCAATATTGGAACTGGAG...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR GCA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTATTGATGATGTTGGATaGACAGAAAGGCAACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVIDDVG*TERQLK Trigger: CTTCAGTTGCCTTTCTGTGCATCCAACATCATCAAT...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAATTGATGATGTTGGATaGACAGAAAGGCAACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRIDDVG*TERQLK Trigger: CTTCAGTTGCCTTTCTGTGCATCCAACATCATCAAT...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CCA 90 bp | GGTATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAAGAGTCATTGCATGTaGCACAGCAACAACTATAAA | + |
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Preference number: 4 (lower is better) Translates to: GMCDCSVLNLYYLSTKPQKSHCM*HSNNYK Trigger: TTTATAGTTGTTGCTGTGCCACATGCAATGACTCTT...TTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACATACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAAGAAAAAGCACAGCTTaGAGGTTGATATCATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRRKSTA*RLISFV Trigger: GACAAATGATATCAACCTTCAAGCTGTGCTTTTTCT...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR TCA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTAGAAAAAGCACAGCTTaGAGGTTGATATCATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVRKSTA*RLISFV Trigger: GACAAATGATATCAACCTTCAAGCTGTGCTTTTTCT...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CCA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTAAGAGTCATTGCATGTaGCACAGCAACAACTATAAA | + |
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Preference number: 4 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVKSHCM*HSNNYK Trigger: TTTATAGTTGTTGCTGTGCCACATGCAATGACTCTT...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCCTCAGTGCTGTGACTCCTGACTGGAAGTCCATGCATCAGAGGATGGACAGAGGTAAAATTCGGTaGCTCCCAGAAGGATTGCGA | + |
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Preference number: 5 (lower is better) Translates to: VFLSAVTPDWKSMHQRMDRGKIR*LPEGLR Trigger: TCGCAATCCTTCTGGGAGCAACCGAATTTTACCTCT...GTCCATCCTCTGATGCATGGACTTCCAGTCAGGAGTCACAGCACTGAGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS CCA 90 bp | ACCAACAGCAAGGTGAGGATGAGGGTCACAGCAGCCAGGAGGAACTaGATCACTTCTATGAAGTGTGTGTCTGAACATGATAAATGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TNSKVRMRVTAARRN*ITSMKCVSEHDKCS Trigger: GCTGCATTTATCATGTTCAGACACACACTTCATAGAAGTGATCCAGTTCCTCCTGGCTGCTGTGACCCTCATCCTCACCTTGCTGTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCCTCAGTGCTGTGACTCCTGACTGGAAGTCCATGCATCAGAGGATGGACGAGAAAAAGCACAGCTaGAAGGTTGATATCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: VFLSAVTPDWKSMHQRMDEKKHS*KVDIIC Trigger: ACAAATGATATCAACCTTCAAGCTGTGCTTTTTCTC...GTCCATCCTCTGATGCATGGACTTCCAGTCAGGAGTCACAGCACTGAGGAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | TTTTGCAGAGGCCTGATATTCAATTTCCAACATCCACATTATATCTCACAAACCAGAGGTAAAATTCGGTaGCTCCCAGAAGGATTGCGA | + |
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Preference number: 5 (lower is better) Translates to: FCRGLIFNFQHPHYISQTRGKIR*LPEGLR Trigger: TCGCAATCCTTCTGGGAGCAACCGAATTTTACCTCT...GGTTTGTGAGATATAATGTGGATGTTGGAAATTGAATATCAGGCCTCTGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | GGTATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAGCAACTGAAGAGTCATaGCATGTGGCACAGCAACAA | + |
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Preference number: 5 (lower is better) Translates to: GMCDCSVLNLYYLSTKPQATEES*HVAQQQ Trigger: TTGTTGCTGTGCCACATGCAATGACTCTTCAGTTGC...TTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTAGAGGTAAAATTCGGTaGCTCCCAGAAGGATTGCGA | + |
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Preference number: 5 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVRGKIR*LPEGLR Trigger: TCGCAATCCTTCTGGGAGCAACCGAATTTTACCTCT...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGCAACTGAAGAGTCATaGCATGTGGCACAGCAACAA | + |
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Preference number: 5 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRATEES*HVAQQQ Trigger: TTGTTGCTGTGCCACATGCAATGACTCTTCAGTTGC...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | GGTATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAGCAAAGGAAATAGTCTaGTCTCCAGTTCCAATATTG | + |
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Preference number: 5 (lower is better) Translates to: GMCDCSVLNLYYLSTKPQAKEIV*SPVPIL Trigger: CAATATTGGAACTGGAGACAAGACTATTTCCTTTGC...TTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGCAAAGGAAATAGTCTaGTCTCCAGTTCCAATATTG | + |
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Preference number: 5 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRAKEIV*SPVPIL Trigger: CAATATTGGAACTGGAGACAAGACTATTTCCTTTGC...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTGAGAAAAAGCACAGCTaGAAGGTTGATATCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVEKKHS*KVDIIC Trigger: ACAAATGATATCAACCTTCAAGCTGTGCTTTTTCTC...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGAGAAAAAGCACAGCTaGAAGGTTGATATCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: MCDCSVLNLYYLSTKPQREKKHS*KVDIIC Trigger: ACAAATGATATCAACCTTCAAGCTGTGCTTTTTCTC...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | TGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAGTTATATTGATTAGCATCTaGGGAACAAAGACAGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: CDCSVLNLYYLSTKPQRVILISI*GTKTEV Trigger: TACCTCTGTCTTTGTTCCCAAGATGCTAATCAATAT...AACTCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTGACTGTAGTGTTCTAAACCTTTATTACCTTAGTACTAAGCCTCAAAGAATATTGATTAGCATCTaGGGAACAAAGACAGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: MCDCSVLNLYYLSTKPQRILISI*GTKTEV Trigger: TACCTCTGTCTTTGTTCCCAAGATGCTAATCAATAT...TCTTTGAGGCTTAGTACTAAGGTAATAAAGGTTTAGAACACTACAGTCACACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS CCA 72 bp | AAGGTGAGGATGAGGGTCACAGCAGCCAGGAGGAACTaGATCACTTCTATGAAGTGTGTGTCTGAACATGAT | + |
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Preference number: 6 (lower is better) Translates to: KVRMRVTAARRN*ITSMKCVSEHD Trigger: ATCATGTTCAGACACACACTTCATAGAAGTGATCCAGTTCCTCCTGGCTGCTGTGACCCTCATCCTCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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| CDS TCA 72 bp | GGGTCACAGCAGCCAGGAGGAACTGGATCACTTCTATaGAGTGTGTGTCTGAACATGATAAATGCAGCAATA | + |
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Preference number: 6 (lower is better) Translates to: GSQQPGGTGSLL*SVCLNMINAAI Trigger: TATTGCTGCATTTATCATGTTCAGACACACACTTCATAGAAGTGATCCAGTTCCTCCTGGCTGCTGTGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059244.3 ENSMUST00000214917.2 ENSMUST00000215791.2 |
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