Pregenerated sensors for OLFR819 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094295Ensembl transcript IDs: ENSMUST00000167974.2, ENSMUST00000216322.3
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCATGCACAAACCCTTTACCTACAATCTGTCCTGCCTGCAAGGTaGGCTGGAACAATGATGGTACAGAACTTGTGGGAGTGGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: AHAQTLYLQSVLPAR*AGTMMVQNLWEWPA Trigger: TGCTGGCCACTCCCACAAGTTCTGTACCATCATTGTTCCAGCTCACCTTGCAGGCAGGACAGATTGTAGGTAAAGGGTTTGTGCATGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR GCA 90 bp | TTTAAAGTGAGGCCTGCACCACTAGAGGGAGGTTATACCCTACACTaGCTGGATTGCCAGAAACCAGAGACTGGCCAGCTCAGATACCTA | + |
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Preference number: 1 (lower is better) Translates to: FKVRPAPLEGGYTLH*LDCQKPETGQLRYL Trigger: TAGGTATCTGAGCTGGCCAGTCTCTGGTTTCTGGCAATCCAGGCAGTGTAGGGTATAACCTCCCTCTAGTGGTGCAGGCCTCACTTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR GCA 90 bp | CCCCTAAGTTCTAGTCTCATTGACAGTGGGAGATACTCTCCAGGATaGAGAAAGAGAAACCTGGACACTAGCCCATGCACAAACCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: PLSSSLIDSGRYSPG*RKRNLDTSPCTNPL Trigger: TAAAGGGTTTGTGCATGGGCTAGTGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGACTAGAACTTAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR GCA 90 bp | AAACGATTCTTAACAATATTCTATTATACTCATAGACGGGTATCTTaGCCAGTTGTCATCAGAGAGGCTTCCTCTAGCAATAGATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: KRFLTIFYYTHRRVS*PVVIREASSSNRWE Trigger: CTCCCATCTATTGCTAGAGGAAGCCTCTCTGATGACAACTGGGCAAGATACCCGTCTATGAGTATAATAGAATATTGTTAAGAATCGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CCA 90 bp | AACCCAGACCCAAAAAGACAAATATGGTATGTATTCACATATACCTaGATAATAGCTGTTAAGTACTTGATAGTCTTACAATCCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: NPDPKRQIWYVFTYT*IIAVKYLIVLQSTD Trigger: GTCTGTGGATTGTAAGACTATCAAGTACTTAACAGCTATTATCCAGGTATATGTGAATACATACCATATTTGTCTTTTTGGGTCTGGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR GCA 90 bp | GTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACAACCTACAATCTGTCCTaGCTGCAAGGTGAGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: VSLTVGDTLQDAERETWTTYNLS*LQGELE Trigger: TTCCAGCTCACCTTGCAGGCAGGACAGATTGTAGGT...TGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR GCA 90 bp | GTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACAGGTTATACCCTACACTaGCTGGATTGCCAGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: VSLTVGDTLQDAERETWTGYTLH*LDCQKP Trigger: TGGTTTCTGGCAATCCAGGCAGTGTAGGGTATAACC...TGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAAGTTCTAGTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGGTGGCCAGCAATGTTTaGTTTAAAGTGAGGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PLSSSLIDSGRYSPGCRKVASNV*FKVRPA Trigger: TGCAGGCCTCACTTTAAACCAAACATTGCTGGCCAC...CTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGACTAGAACTTAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CCA 90 bp | TACTCTCCAGGATGCAGAAAGAGAAACCTGGACACTAGCCCATGCACAAACCCTATGGTACAGAACTTGTaGGAGTGGCCAGCAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: YSPGCRKRNLDTSPCTNPMVQNL*EWPAMF Trigger: AAACATTGCTGGCCACTCCCACAAGTTCTGTACCAT...AGGGTTTGTGCATGGGCTAGTGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACACTAGCCCATGCACAAAGAGTCAGCGAGAAATaGAATGAGATTTCTCAACCT | + |
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Preference number: 2 (lower is better) Translates to: GDTLQDAERETWTLAHAQRVSEK*NEISQP Trigger: AGGTTGAGAAATCTCATTCCATTTCTCGCTGACTCT...TTGTGCATGGGCTAGTGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR TCA 90 bp | CTACAAGGACACTTTGTCTACTGTACTCATTCCAGCATTATTCACAATAGCCAGAGGTCAGTAAAGAAATaGATGTGGAGGAGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LQGHFVYCTHSSIIHNSQRSVKK*MWRRAR Trigger: CCTGGCTCTCCTCCACATTCATTTCTTTACTGACCT...CTGGCTATTGTGAATAATGCTGGAATGAGTACAGTAGACAAAGTGTCCTTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR TCA 90 bp | GTACTTGATAGTCTTACAATCCACAGACCGAGAGAGGTTAGGGAAAGAGACAGTGTGATAAAGGAATCATaGGGAGTTGGAGAAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: VLDSLTIHRPREVRERDSVIKES*GVGETV Trigger: TACAGTTTCTCCAACTCCTCATGATTCCTTTATCAC...ACTGTCTCTTTCCCTAACCTCTCTCGGTCTGTGGATTGTAAGACTATCAAGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAAGTTCTAGTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGCAACTTCAAATAATCTaGATTTCAGTTGGGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: PLSSSLIDSGRYSPGCRKQLQII*ISVGSF Trigger: GAAAGACCCAACTGAAATCCAGATTATTTGAAGTTG...CTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGACTAGAACTTAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CAA 90 bp | GAGGAGAGCCAGGCAAACAAACAAGGAGTAAAAGCTTCCTTCTTCTaGTCCTTTATATTGTATGCCATGAGAAGGTGTATGATTAAATGT | + |
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Preference number: 2 (lower is better) Translates to: EESQANKQGVKASFF*SFILYAMRRCMIKC Trigger: ACATTTAATCATACACCTTCTCATGGCATACAATATAAAGGACAAGAAGAAGGAAGCTTTTACTCCTTGTTTGTTTGCCTGGCTCTCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CCA 90 bp | CTACAAGGACACTTTGTCTACTGTACTCATTCCAGCATTATTCACAATAGCCAGTCAGCCAATCAAAAATaGCTATCTCCCAAAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LQGHFVYCTHSSIIHNSQSANQK*LSPKRN Trigger: GTTTCTTTTGGGAGATAGCCATTTTTGATTGGCTGA...CTGGCTATTGTGAATAATGCTGGAATGAGTACAGTAGACAAAGTGTCCTTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CAA 90 bp | GCAAACAAACAAGGAGTAAAAGCTTCCTTCTTCTTGTCCTTTATATaGTATGCCATGAGAAGGTGTATGATTAAATGTGAGCCTTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: ANKQGVKASFFLSFI*YAMRRCMIKCEPSN Trigger: GTTGGAAGGCTCACATTTAATCATACACCTTCTCATGGCATACAATATAAAGGACAAGAAGAAGGAAGCTTTTACTCCTTGTTTGTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CAA 90 bp | ATATGGTATGTATTCACATATACCTGGATAATAGCTGTTAAGTACTaGATAGTCTTACAATCCACAGACCGAGAGAGGTTAGGGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: IWYVFTYTWIIAVKY*IVLQSTDRERLGKE Trigger: CTCTTTCCCTAACCTCTCTCGGTCTGTGGATTGTAAGACTATCAAGTACTTAACAGCTATTATCCAGGTATATGTGAATACATACCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR GCA 90 bp | TATTCTATTATACTCATAGACGGGTATCTTGCCCAGTTGTCATCAGAGAGGCTTGTCCTTTATATTGTATaGCATGAGAAGGTGTATGAT | + |
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Preference number: 2 (lower is better) Translates to: YSIILIDGYLAQLSSERLVLYIV*HEKVYD Trigger: ATCATACACCTTCTCATGGCATACAATATAAAGGAC...AAGCCTCTCTGATGACAACTGGGCAAGATACCCGTCTATGAGTATAATAGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR GCA 72 bp | AGGCCTGCACCACTAGAGGGAGGTTATACCCTACACTaGCTGGATTGCCAGAAACCAGAGACTGGCCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: RPAPLEGGYTLH*LDCQKPETGQL Trigger: GAGCTGGCCAGTCTCTGGTTTCTGGCAATCCAGGCAGTGTAGGGTATAACCTCCCTCTAGTGGTGCAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR GCA 72 bp | CCACTAGAGGGAGGTTATACCCTACACTGCCTGGATTaGCAGAAACCAGAGACTGGCCAGCTCAGATACCTA | + |
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Preference number: 3 (lower is better) Translates to: PLEGGYTLHCLD*QKPETGQLRYL Trigger: TAGGTATCTGAGCTGGCCAGTCTCTGGTTTCTGGCAATCCAGGCAGTGTAGGGTATAACCTCCCTCTAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CCA 72 bp | TACCCTACACTGCCTGGATTGCCAGAAACCAGAGACTaGCCAGCTCAGATACCTAGGCTAGGCCAAACACAA | + |
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Preference number: 3 (lower is better) Translates to: YPTLPGLPETRD*PAQIPRLGQTQ Trigger: TTGTGTTTGGCCTAGCCTAGGTATCTGAGCTGGCCAGTCTCTGGTTTCTGGCAATCCAGGCAGTGTAGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CCA 72 bp | CCTTTACCTACAATCTGTCCTGCCTGCAAGGTGAGCTaGAACAATGATGGTACAGAACTTGTGGGAGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PLPTICPACKVS*NNDGTELVGVA Trigger: GGCCACTCCCACAAGTTCTGTACCATCATTGTTCCAGCTCACCTTGCAGGCAGGACAGATTGTAGGTAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CAA 90 bp | GTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACAGGGTATCTTGCCCAGTaGTCATCAGAGAGGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: VSLTVGDTLQDAERETWTGYLAQ*SSERLP Trigger: AGGAAGCCTCTCTGATGACAACTGGGCAAGATACCC...TGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR TCA 72 bp | TACAATCTGTCCTGCCTGCAAGGTGAGCTGGAACAATaGTGGTACAGAACTTGTGGGAGTGGCCAGCAATGT | + |
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Preference number: 3 (lower is better) Translates to: YNLSCLQGELEQ*WYRTCGSGQQC Trigger: ACATTGCTGGCCACTCCCACAAGTTCTGTACCATCATTGTTCCAGCTCACCTTGCAGGCAGGACAGATTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR TCA 72 bp | CAAACCCTTTACCTACAATCTGTCCTGCCTGCAAGGTaGGCTGGAACAATGATGGTACAGAACTTGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: QTLYLQSVLPAR*AGTMMVQNLWE Trigger: CTCCCACAAGTTCTGTACCATCATTGTTCCAGCTCACCTTGCAGGCAGGACAGATTGTAGGTAAAGGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR GCA 72 bp | TCTAGTCTCATTGACAGTGGGAGATACTCTCCAGGATaGAGAAAGAGAAACCTGGACACTAGCCCATGCACA | + |
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Preference number: 3 (lower is better) Translates to: SSLIDSGRYSPG*RKRNLDTSPCT Trigger: TGTGCATGGGCTAGTGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGACTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CAA 90 bp | GGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACACTAGCCCATGCACAATTCTTGTCCTTTATATaGTATGCCATGAGAAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: GDTLQDAERETWTLAHAQFLSFI*YAMRRC Trigger: ACACCTTCTCATGGCATACAATATAAAGGACAAGAA...TTGTGCATGGGCTAGTGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTAAAAGCTTCCTTCTTCTTGTCCTTTATATTGTATGCCATGAGAAGGTGAGGAATCATGAGGAGTaGGAGAAACTGTACTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: RSKSFLLLVLYIVCHEKVRNHEE*EKLYCG Trigger: ACCACAGTACAGTTTCTCCAACTCCTCATGATTCCT...CACCTTCTCATGGCATACAATATAAAGGACAAGAAGAAGGAAGCTTTTACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR GCA 72 bp | TTAACAATATTCTATTATACTCATAGACGGGTATCTTaGCCAGTTGTCATCAGAGAGGCTTCCTCTAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: LTIFYYTHRRVS*PVVIREASSSN Trigger: ATTGCTAGAGGAAGCCTCTCTGATGACAACTGGGCAAGATACCCGTCTATGAGTATAATAGAATATTGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTAAAAGCTTCCTTCTTCTTGTCCTTTATATTGTATGCCATGAGAAGGTGCACAGGTGTGCTCAATaGATTGGCATTTTAGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: RSKSFLLLVLYIVCHEKVHRCAQ*IGILVN Trigger: ATTAACTAAAATGCCAATCAATTGAGCACACCTGTG...CACCTTCTCATGGCATACAATATAAAGGACAAGAAGAAGGAAGCTTTTACTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CCA 72 bp | GAAATCAGTGTAGCAGATCATCAGAAAATGGGGAATTaGTTTGATCTATCTCAAGATCCAGCTATATCGTTT | + |
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Preference number: 3 (lower is better) Translates to: EISVADHQKMGN*FDLSQDPAISF Trigger: AAACGATATAGCTGGATCTTGAGATAGATCAAACCAATTCCCCATTTTCTGATGATCTGCTACACTGATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | CCCCTAAGTTCTAGTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGCCACACTTATGGTCTTaGGCTGTACCAGCAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PLSSSLIDSGRYSPGCRKPHLWS*AVPAGA Trigger: TGCACCTGCTGGTACAGCTCAAGACCATAAGTGTGG...CTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGACTAGAACTTAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | GGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACACTAGCCCATGCACAAGTGTCTGCCTGCTGCTaGGGGCATTTTCAAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: GDTLQDAERETWTLAHAQVSACC*GHFQEC Trigger: ACATTCTTGAAAATGCCCTCAGCAGCAGGCAGACAC...TTGTGCATGGGCTAGTGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | GTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACAGAGGCACCACACTGCTaGTATAGCACATCTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: VSLTVGDTLQDAERETWTEAPHC*YSTSLG Trigger: TCCTAGAGATGTGCTATATCAGCAGTGTGGTGCCTC...TGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | GTACTTGATAGTCTTACAATCCACAGACCGAGAGAGGTTAGGGAAAGAGACAGTCACAAAAGGGCAGAGTaGAGATCCAGGTGGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VLDSLTIHRPREVRERDSHKRAE*RSRWSG Trigger: CCCAGACCACCTGGATCTTCACTCTGCCCTTTTGTG...ACTGTCTCTTTCCCTAACCTCTCTCGGTCTGTGGATTGTAAGACTATCAAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | ACCCATAACCAGACACTATGCAGAGAGAGTCTAAATTTGCATTCTGCATCTGTTAGGTGCACCAGCATCTaGGGCACCACACTGCTGATA | + |
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Preference number: 4 (lower is better) Translates to: THNQTLCRESLNLHSASVRCTSI*GTTLLI Trigger: TATCAGCAGTGTGGTGCCTCAGATGCTGGTGCACCT...AACAGATGCAGAATGCAAATTTAGACTCTCTCTGCATAGTGTCTGGTTATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | GTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACACTCTGTGTTACCTTTTaGAAGGCTTCCTTCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: VSLTVGDTLQDAERETWTLCVTF*KASFTS Trigger: AGAAGTGAAGGAAGCCTTTCAAAAGGTAACACAGAG...TGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | GTACTTGATAGTCTTACAATCCACAGACCGAGAGAGGTTAGGGAAAGAGACAGTTGGGTTGGAGATAAGTaGATAAGGCAGTGCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: VLDSLTIHRPREVRERDSWVGDK*IRQCHR Trigger: TCTATGGCACTGCCTTATTCACTTATCTCCAACCCA...ACTGTCTCTTTCCCTAACCTCTCTCGGTCTGTGGATTGTAAGACTATCAAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | ACCCATAACCAGACACTATGCAGAGAGAGTCTAAATTTGCATTCTGCATCTGTTTGTGTCTGGGGTGTGTaGACTCTTGGGTTGGAGATA | + |
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Preference number: 4 (lower is better) Translates to: THNQTLCRESLNLHSASVCVWGV*TLGLEI Trigger: TATCTCCAACCCAAGAGTTCACACACCCCAGACACA...AACAGATGCAGAATGCAAATTTAGACTCTCTCTGCATAGTGTCTGGTTATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | CTACAAGGACACTTTGTCTACTGTACTCATTCCAGCATTATTCACAATAGCCAGAAAAGGCCACCAATGTaGATTCAGTGCAGAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LQGHFVYCTHSSIIHNSQKRPPM*IQCRGT Trigger: TGTCCCTCTGCACTGAATTCACATTGGTGGCCTTTT...CTGGCTATTGTGAATAATGCTGGAATGAGTACAGTAGACAAAGTGTCCTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | AGGAGTAAAAGCTTCCTTCTTCTTGTCCTTTATATTGTATGCCATGAGAAGGTGGTGAATACATACATCTaGGCTGCACAGCCTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: RSKSFLLLVLYIVCHEKVVNTYI*AAQPAT Trigger: TGTGGCAGGCTGTGCAGCTCAGATGTATGTATTCAC...CACCTTCTCATGGCATACAATATAAAGGACAAGAAGAAGGAAGCTTTTACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CAA 72 bp | TATTCTATTATACTCATAGACGGGTATCTTGCCCAGTaGTCATCAGAGAGGCTTCCTCTAGCAATAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: YSIILIDGYLAQ*SSERLPLAIDG Trigger: CCCATCTATTGCTAGAGGAAGCCTCTCTGATGACAACTGGGCAAGATACCCGTCTATGAGTATAATAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | GTACTTGATAGTCTTACAATCCACAGACCGAGAGAGGTTAGGGAAAGAGACAGTTCACAGAAAAAGTGTTaGATTGTTCCTGCTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: VLDSLTIHRPREVRERDSSQKKC*IVPAPQ Trigger: TTGTGGAGCAGGAACAATTCAACACTTTTTCTGTGA...ACTGTCTCTTTCCCTAACCTCTCTCGGTCTGTGGATTGTAAGACTATCAAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR TCA 90 bp | AGGAGTAAAAGCTTCCTTCTTCTTGTCCTTTATATTGTATGCCATGAGAAGGTGGAAACAACCAGGATATaGGAGGAGCAGGTGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: RSKSFLLLVLYIVCHEKVETTRI*EEQVEK Trigger: TTTCTCCACCTGCTCCTCTCATATCCTGGTTGTTTC...CACCTTCTCATGGCATACAATATAAAGGACAAGAAGAAGGAAGCTTTTACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CAA 72 bp | ATCCAGCTATATCGTTTTGGAGTATATACCCAAAGGTaGTTCTGCCCTACTACAAGGACACTTTGTCTACTG | + |
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Preference number: 4 (lower is better) Translates to: IQLYRFGVYTQR*FCPTTRTLCLL Trigger: CAGTAGACAAAGTGTCCTTGTAGTAGGGCAGAACAACCTTTGGGTATATACTCCAAAACGATATAGCTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CAA 72 bp | TACCCAAAGGTTGTTCTGCCCTACTACAAGGACACTTaGTCTACTGTACTCATTCCAGCATTATTCACAATA | + |
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Preference number: 4 (lower is better) Translates to: YPKVVLPYYKDT*STVLIPALFTI Trigger: TATTGTGAATAATGCTGGAATGAGTACAGTAGACAAAGTGTCCTTGTAGTAGGGCAGAACAACCTTTGGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CAA 72 bp | CAAGGAGTAAAAGCTTCCTTCTTCTTGTCCTTTATATaGTATGCCATGAGAAGGTGTATGATTAAATGTGAG | + |
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Preference number: 4 (lower is better) Translates to: QGVKASFFLSFI*YAMRRCMIKCE Trigger: CTCACATTTAATCATACACCTTCTCATGGCATACAATATAAAGGACAAGAAGAAGGAAGCTTTTACTCCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| 3UTR CAA 72 bp | AATAAGATTCCATACAATTCATTTAACATAGAGAGGTaGAATTGGTGTAGACGTGTAACCTTCACCCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: NKIPYNSFNIER*NWCRRVTFTPK Trigger: CTTAGGGGTGAAGGTTACACGTCTACACCAATTCAACCTCTCTATGTTAAATGAATTGTATGGAATCTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS GCA 90 bp | GCAACACTCTGTCAGCCCCAAGATGGTGAATACATACATCTGAGCTaGACAGCCTGCCACACTTATGGTCTTGAGCTGTACCAGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: ATLCQPQDGEYIHLS*TACHTYGLELYQQV Trigger: CACCTGCTGGTACAGCTCAAGACCATAAGTGTGGCAGGCTGTGCAGCTCAGATGTATGTATTCACCATCTTGGGGCTGACAGAGTGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167974.2 ENSMUST00000216322.3 |
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| CDS-3UTR CAA 90 bp | GGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACACTAGCCCATGCACAACCTCTGTGTTACCTTTaGAAAGGCTTCCTTCACTTC | + |
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Preference number: 5 (lower is better) Translates to: GDTLQDAERETWTLAHAQPLCYL*KGFLHF Trigger: GAAGTGAAGGAAGCCTTTCAAAAGGTAACACAGAGG...TTGTGCATGGGCTAGTGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR CAA 90 bp | ACCCATAACCAGACACTATGCAGAGAGAGTCTAAATTTGCATTCTGCATCTGTTGCCACACTTATGGTCTaGAGCTGTACCAGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: THNQTLCRESLNLHSASVATLMV*SCTSRC Trigger: GCACCTGCTGGTACAGCTCAAGACCATAAGTGTGGC...AACAGATGCAGAATGCAAATTTAGACTCTCTCTGCATAGTGTCTGGTTATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR CAA 90 bp | GTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGAGAAACCTGGACAGTCACAGAAAAAGTGTaGAATTGTTCCTGCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: VSLTVGDTLQDAERETWTVTEKV*NCSCST Trigger: TGTGGAGCAGGAACAATTCAACACTTTTTCTGTGAC...TGTCCAGGTTTCTCTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR CAA 90 bp | CCCCTAAGTTCTAGTCTCATTGACAGTGGGAGATACTCTCCAGGATGCAGAAAGAGAAAAAGTGTTGAATaGTTCCTGCTCCACAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: PLSSSLIDSGRYSPGCRKRKSVE*FLLHKR Trigger: CCTTTTGTGGAGCAGGAACAATTCAACACTTTTTCT...CTTTCTGCATCCTGGAGAGTATCTCCCACTGTCAATGAGACTAGAACTTAGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS-3UTR CAA 90 bp | AGGAGTAAAAGCTTCCTTCTTCTTGTCCTTTATATTGTATGCCATGAGAAGGTGATGAGAGCAGTAACCTaGTCTGTGTCTGGGGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: RSKSFLLLVLYIVCHEKVMRAVT*SVSGVC Trigger: ACACACCCCAGACACAGACAAGGTTACTGCTCTCAT...CACCTTCTCATGGCATACAATATAAAGGACAAGAAGAAGGAAGCTTTTACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216322.3 |
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| CDS CAA 72 bp | GCAGGGGTGACCACAGTGTACATGAGAGCAGTAACCTaGTCTGTGTCTGGGGTGTGTGAACTCTTGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: AGVTTVYMRAVT*SVSGVCELLGW Trigger: CCAACCCAAGAGTTCACACACCCCAGACACAGACAAGGTTACTGCTCTCATGTACACTGTGGTCACCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167974.2 ENSMUST00000216322.3 |
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| CDS TCA 72 bp | TTGCCAGAAGGCAACACTCTGTCAGCCCCAAGATGGTaGATACATACATCTGAGCTGCACAGCCTGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: LPEGNTLSAPRW*IHTSELHSLPH Trigger: GTGTGGCAGGCTGTGCAGCTCAGATGTATGTATTCACCATCTTGGGGCTGACAGAGTGTTGCCTTCTGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167974.2 ENSMUST00000216322.3 |
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| CDS TCA 72 bp | ACAAAAGGGCAGAGTGAAGATCCAGGTGGTCTGGGCTaGTTCTACCAGGATCCCAGTCATCCAAGATGCACC | + |
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Preference number: 6 (lower is better) Translates to: TKGQSEDPGGLG*FYQDPSHPRCT Trigger: GGTGCATCTTGGATGACTGGGATCCTGGTAGAATCAGCCCAGACCACCTGGATCTTCACTCTGCCCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167974.2 ENSMUST00000216322.3 |
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| CDS TCA 72 bp | GCTGCAGCTCTGCTAGAGAAGAAAAGGCCACCAATGTaGATTCAGTGCAGAGGGACAGGCTTCCATTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AAALLEKKRPPM*IQCRGTGFHSS Trigger: TGAAGAATGGAAGCCTGTCCCTCTGCACTGAATTCACATTGGTGGCCTTTTCTTCTCTAGCAGAGCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167974.2 ENSMUST00000216322.3 |
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| CDS TCA 72 bp | TGTCTGGGGTGTGTGAACTCTTGGGTTGGAGATAAGTaGATAAGGCAGTGCCATAGAAAAGAGAAACAACCA | + |
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Preference number: 6 (lower is better) Translates to: CLGCVNSWVGDK*IRQCHRKEKQP Trigger: TGGTTGTTTCTCTTTTCTATGGCACTGCCTTATTCACTTATCTCCAACCCAAGAGTTCACACACCCCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167974.2 ENSMUST00000216322.3 |
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