Pregenerated sensors for OLFR809 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050251Ensembl transcript IDs: ENSMUST00000059891.3, ENSMUST00000203598.3, ENSMUST00000218237.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGAATCCCTTCCTCCTCTCACCAACTCCCTATCACCTCTGCTGCTaGCCTATTGGAAACAACCCCTCAGTTGTTCCCCCAGGAAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: MNPFLLSPTPYHLCC*PIGNNPSVVPPGRL Trigger: GAGCCTTCCTGGGGGAACAACTGAGGGGTTGTTTCCAATAGGGCAGCAGCAGAGGTGATAGGGAGTTGGTGAGAGGAGGAAGGGATTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR TCA 90 bp | TTTGCTAGTCAGAGCTGGGAGTTGCCCCTGACCATTGCATCTGAATaGATCCCTTCCTCCTCTCACCAACTCCCTATCACCTCTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: FASQSWELPLTIASE*IPSSSHQLPITSAA Trigger: AGCAGCAGAGGTGATAGGGAGTTGGTGAGAGGAGGAAGGGATTCATTCAGATGCAATGGTCAGGGGCAACTCCCAGCTCTGACTAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR GCA 90 bp | AGCCAGCACAGCTGCTTGACACAGTTCCAGCAAAGCTGGGCAGATTaGTACAGTCACTGTTCTTCATTCTCTAACTTTTGGGTTTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SQHSCLTQFQQSWAD*YSHCSSFSNFWVLL Trigger: GAGCAAAACCCAAAAGTTAGAGAATGAAGAACAGTGACTGTAGCAATCTGCCCAGCTTTGCTGGAACTGTGTCAAGCAGCTGTGCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR TCA 90 bp | TGTTACAGATTCAAAATCTATTTTATTTATAGGCTTAGGGCTCTCTaGAAATGGAGTTTAAAGATAGAGGGTCAACAGGGTACATCCCTA | + |
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Preference number: 1 (lower is better) Translates to: CYRFKIYFIYRLRAL*KWSLKIEGQQGTSL Trigger: TAGGGATGTACCCTGTTGACCCTCTATCTTTAAACTCCATTTTCAGAGAGCCCTAAGCCTATAAATAAAATAGATTTTGAATCTGTAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR CAA 90 bp | CCTTCCTCCTCTCACCAACTCCCTATCACCTCTGCTGCTGCCCTATaGGAAACAACCCCTCAGTTGTTCCCCCAGGAAGGCTCCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: PSSSHQLPITSAAAL*ETTPQLFPQEGSSI Trigger: AATGCTGGAGCCTTCCTGGGGGAACAACTGAGGGGTTGTTTCCAATAGGGCAGCAGCAGAGGTGATAGGGAGTTGGTGAGAGGAGGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGCTGCCCTATTGGAAACAACCCCTCAGTTGTTCCCCCAGGAAGGCTCCAAGGTGCTTGTGTCTGTaGAGGATATTTGCAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LLLPYWKQPLSCSPRKAPRCLCL*RIFAAK Trigger: CTTTGCTGCAAATATCCTGCACAGACACAAGCACCT...TGGAGCCTTCCTGGGGGAACAACTGAGGGGTTGTTTCCAATAGGGCAGCAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CCA 90 bp | GGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGCATTCGAGGCCAGCTTGGTCTAAGCAACTCCAGCCTTaGCAGATGTTTTCACATACA | + |
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Preference number: 2 (lower is better) Translates to: GTQEAEAGGFLHSRPAWSKQLQP*QMFSHT Trigger: TGTATGTGAAAACATCTGCCAAGGCTGGAGTTGCTT...AGACCAAGCTGGCCTCGAATGCAGAAATCCACCTGCCTCTGCCTCCTGAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGCAGAGGCAGGTGGATTTCTGCATTCGAGGCCAGCTTGGTCTACAGAGTTCTGTGCAGGATATTTaGAGCAAAGGAGCAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RRQRQVDFCIRGQLGLQSSVQDI*SKGAES Trigger: TGACTCTGCTCCTTTGCTGCAAATATCCTGCACAGA...ACTCTGTAGACCAAGCTGGCCTCGAATGCAGAAATCCACCTGCCTCTGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGCAGAGGCAGGTGGATTTCTGCATTCGAGGCCAGCTTGGTCTACAGAGTCCTATCTCTTTTCTGTaGAACCTGTGTAAACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RRQRQVDFCIRGQLGLQSPISFL*NLCKQR Trigger: TCTCTGTTTACACAGGTTTCACAGAAAAGAGATAGG...ACTCTGTAGACCAAGCTGGCCTCGAATGCAGAAATCCACCTGCCTCTGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGCAGAGGCAGGTGGATTTCTGCATTCGAGGCCAGCTTGGTCTACAGAGTAGGCTTAGGGCTCTCTaGAAATGGAGTTTAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: RRQRQVDFCIRGQLGLQSRLRAL*KWSLKI Trigger: TATCTTTAAACTCCATTTTCAGAGAGCCCTAAGCCT...ACTCTGTAGACCAAGCTGGCCTCGAATGCAGAAATCCACCTGCCTCTGCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CCA 90 bp | TCACCAACTCCCTATCACCTCTGCTGCTGCCCTATTGGAAACAACCCCTCAGTTGAGTCACATGTGAAGTaGTCAATAGTGTTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SPTPYHLCCCPIGNNPSVESHVK*SIVLES Trigger: TGACTCCAACACTATTGACCACTTCACATGTGACTC...AACTGAGGGGTTGTTTCCAATAGGGCAGCAGCAGAGGTGATAGGGAGTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR TCA 90 bp | TCACCAACTCCCTATCACCTCTGCTGCTGCCCTATTGGAAACAACCCCTCAGTTATTTCTGAGATGAACTaGAACAAGGATACGTTCATC | + |
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Preference number: 2 (lower is better) Translates to: SPTPYHLCCCPIGNNPSVISEMN*NKDTFI Trigger: GATGAACGTATCCTTGTTTCAGTTCATCTCAGAAAT...AACTGAGGGGTTGTTTCCAATAGGGCAGCAGCAGAGGTGATAGGGAGTTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACCCCTCAGTTGTTCCCCCAGGAAGGCTCCAGCATTTCCTCTCATTTAAGAAACAGGGAGGCTCAATaGCTTAACCTTTCCAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: TTPQLFPQEGSSISSHLRNREAQ*LNLSKN Trigger: ATTTTTGGAAAGGTTAAGTCATTGAGCCTCCCTGTT...TCTTAAATGAGAGGAAATGCTGGAGCCTTCCTGGGGGAACAACTGAGGGGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR GCA 90 bp | AACTTTAAACTAGGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGCATTCGAGGGAAACTGTTACATGTTaGATGTGTAAGCTATATCAG | + |
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Preference number: 2 (lower is better) Translates to: NFKLGTQEAEAGGFLHSRETVTC*MCKLYQ Trigger: CTGATATAGCTTACACATGCAACATGTAACAGTTTC...CCTCGAATGCAGAAATCCACCTGCCTCTGCCTCCTGAGTGCCTAGTTTAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGAGGCTCAATGACTTAACCTTTCCAAAAATATGCATGATGTCATTGACACTAGATCTAAGCCCATaGCCAGTGGAGGAAAAACTA | + |
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Preference number: 2 (lower is better) Translates to: TGRLNDLTFPKICMMSLTLDLSP*PVEEKL Trigger: TAGTTTTTCCTCCACTGGCCATGGGCTTAGATCTAG...TGTCAATGACATCATGCATATTTTTGGAAAGGTTAAGTCATTGAGCCTCCCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR TCA 90 bp | GCTACAGTCACTGTTCTTCATTCTCTAACTTTTGGGTTTTGCTCTCTGCATGTTTGCATAACATACACATaGATTAACAGGGAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: ATVTVLHSLTFGFCSLHVCITYT*INREAQ Trigger: TTGAGCCTCCCTGTTAATTCATGTGTATGTTATGCA...AACATGCAGAGAGCAAAACCCAAAAGTTAGAGAATGAAGAACAGTGACTGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CAA 90 bp | GGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGCATTCGAGGCCAGCTTGGTCTTCTGCTGCTGCCCTATaGGAAACAACCCCTCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: GTQEAEAGGFLHSRPAWSSAAAL*ETTPQL Trigger: CAACTGAGGGGTTGTTTCCAATAGGGCAGCAGCAGA...AGACCAAGCTGGCCTCGAATGCAGAAATCCACCTGCCTCTGCCTCCTGAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CAA 90 bp | GGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGCATTCGAGGCCAGCTTGGTCTGCAAAGCTGGGCAGATaGCTACAGTCACTGTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: GTQEAEAGGFLHSRPAWSAKLGR*LQSLFF Trigger: GAAGAACAGTGACTGTAGCAATCTGCCCAGCTTTGC...AGACCAAGCTGGCCTCGAATGCAGAAATCCACCTGCCTCTGCCTCCTGAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR CCA 72 bp | CTCACCAACTCCCTATCACCTCTGCTGCTGCCCTATTaGAAACAACCCCTCAGTTGTTCCCCCAGGAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LTNSLSPLLLPY*KQPLSCSPRKA Trigger: AGCCTTCCTGGGGGAACAACTGAGGGGTTGTTTCCAATAGGGCAGCAGCAGAGGTGATAGGGAGTTGGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR TCA 72 bp | AGCATCTGTTTGCTAGTCAGAGCTGGGAGTTGCCCCTaGCCATTGCATCTGAATGAATCCCTTCCTCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: SICLLVRAGSCP*PLHLNESLPPL Trigger: GAGAGGAGGAAGGGATTCATTCAGATGCAATGGTCAGGGGCAACTCCCAGCTCTGACTAGCAAACAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR TCA 72 bp | GGAAACAGCAAGAGTCATGAAGCCAGCACAGCTGCTTaGCACAGTTCCAGCAAAGCTGGGCAGATTGCTACA | + |
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Preference number: 3 (lower is better) Translates to: GNSKSHEASTAA*HSSSKAGQIAT Trigger: TGTAGCAATCTGCCCAGCTTTGCTGGAACTGTGTCAAGCAGCTGTGCTGGCTTCATGACTCTTGCTGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGAGCATAGCCACCCCCTTTGTTAAAGCAACTCCAGCCTTGGCAGATGTTGCCTTTTCCCTTTGTTaGGCTGAGGGAAATTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: VLSIATPFVKATPALADVAFSLC*AEGNFR Trigger: TCTGAAATTTCCCTCAGCCAAACAAAGGGAAAAGGC...AACATCTGCCAAGGCTGGAGTTGCTTTAACAAAGGGGGTGGCTATGCTCAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CAA 90 bp | GCTACAGTCACTGTTCTTCATTCTCTAACTTTTGGGTTTTGCTCTCTGCATGTTAGTCAGAGCTGGGAGTaGCCCCTGACCATTGCATCT | + |
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Preference number: 3 (lower is better) Translates to: ATVTVLHSLTFGFCSLHVSQSWE*PLTIAS Trigger: AGATGCAATGGTCAGGGGCAACTCCCAGCTCTGACT...AACATGCAGAGAGCAAAACCCAAAAGTTAGAGAATGAAGAACAGTGACTGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CAA 90 bp | GCTACAGTCACTGTTCTTCATTCTCTAACTTTTGGGTTTTGCTCTCTGCATGTTCAGAGAAGCATCTGTTaGCTAGTCAGAGCTGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: ATVTVLHSLTFGFCSLHVQRSIC*LVRAGS Trigger: ACTCCCAGCTCTGACTAGCAAACAGATGCTTCTCTG...AACATGCAGAGAGCAAAACCCAAAAGTTAGAGAATGAAGAACAGTGACTGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR-3UTR CAA 90 bp | GCTACAGTCACTGTTCTTCATTCTCTAACTTTTGGGTTTTGCTCTCTGCATGTTTTATATGGCCATTATTaGGAAGTCTTCCTTATGCCA | + |
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Preference number: 3 (lower is better) Translates to: ATVTVLHSLTFGFCSLHVLYGHY*EVFLMP Trigger: TGGCATAAGGAAGACTTCCAAATAATGGCCATATAA...AACATGCAGAGAGCAAAACCCAAAAGTTAGAGAATGAAGAACAGTGACTGTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR CCA 72 bp | TTATGTATTGGTAGTTCCCATATCATATTTCTCTATTaGCACAGCCACATCCATTGGAAACAGCAAGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LCIGSSHIIFLY*HSHIHWKQQES Trigger: TGACTCTTGCTGTTTCCAATGGATGTGGCTGTGCCAATAGAGAAATATGATATGGGAACTACCAATACATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR TCA 72 bp | TTCAAAATCTATTTTATTTATAGGCTTAGGGCTCTCTaGAAATGGAGTTTAAAGATAGAGGGTCAACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: FKIYFIYRLRAL*KWSLKIEGQQG Trigger: ACCCTGTTGACCCTCTATCTTTAAACTCCATTTTCAGAGAGCCCTAAGCCTATAAATAAAATAGATTTTGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR GCA 72 bp | ACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTaGATGTGTAAGCTATATCAGATCAGCAGTTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: TFISFMVETVTC*MCKLYQISSFE Trigger: TTCAAAACTGCTGATCTGATATAGCTTACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| 3UTR CAA 72 bp | TCTCACCAACTCCCTATCACCTCTGCTGCTGCCCTATaGGAAACAACCCCTCAGTTGTTCCCCCAGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SHQLPITSAAAL*ETTPQLFPQEG Trigger: GCCTTCCTGGGGGAACAACTGAGGGGTTGTTTCCAATAGGGCAGCAGCAGAGGTGATAGGGAGTTGGTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| CDS-3UTR CCA 90 bp | GTGTTGAGCATAGCCACCCCCTTTGTTAAAGCAACTCCAGCCTTGGCAGATGTTATGGGTGTCTTCAGGTaGGAATCCAACAGTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: VLSIATPFVKATPALADVMGVFR*ESNSVR Trigger: TCTCACACTGTTGGATTCCCACCTGAAGACACCCAT...AACATCTGCCAAGGCTGGAGTTGCTTTAACAAAGGGGGTGGCTATGCTCAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| CDS-3UTR CCA 90 bp | ACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTGTAATGGGTGTCTTCAGGTaGGAATCCAACAGTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TRIRSSVLWLKLLHVACVMGVFR*ESNSVR Trigger: TCTCACACTGTTGGATTCCCACCTGAAGACACCCAT...TACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059891.3 ENSMUST00000203598.3 ENSMUST00000218237.2 |
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| CDS-3UTR CCA 90 bp | GAAACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTATGGGTGTCTTCAGGTaGGAATCCAACAGTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ETRIRSSVLWLKLLHVACMGVFR*ESNSVR Trigger: TCTCACACTGTTGGATTCCCACCTGAAGACACCCAT...ACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059891.3 ENSMUST00000203598.3 ENSMUST00000218237.2 |
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| CDS-3UTR CCA 90 bp | ACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTGTACTAGATCTAAGCCCATaGCCAGTGGAGGAAAAACTA | + |
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Preference number: 4 (lower is better) Translates to: TRIRSSVLWLKLLHVACVLDLSP*PVEEKL Trigger: TAGTTTTTCCTCCACTGGCCATGGGCTTAGATCTAG...TACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059891.3 ENSMUST00000218237.2 |
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| CDS-3UTR CCA 90 bp | GAAACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTCTAGATCTAAGCCCATaGCCAGTGGAGGAAAAACTA | + |
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Preference number: 4 (lower is better) Translates to: ETRIRSSVLWLKLLHVACLDLSP*PVEEKL Trigger: TAGTTTTTCCTCCACTGGCCATGGGCTTAGATCTAG...ACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059891.3 ENSMUST00000218237.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGAGGCTCAATGACTTAACCTTTCCAAAAATATGCATGATGTCATTGACAAAGGAAAAACTCTGTTaGGCCAAGGAAGATAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TGRLNDLTFPKICMMSLTKEKLC*AKEDKE Trigger: TTCTTTATCTTCCTTGGCTCAACAGAGTTTTTCCTT...TGTCAATGACATCATGCATATTTTTGGAAAGGTTAAGTCATTGAGCCTCCCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203598.3 |
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| CDS-3UTR TCA 90 bp | AACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTGTGATGAAGTATGTCACTaGAGTTCTGTTCCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: NKDTFISFMVETVTCCMCDEVCH*SSVPHL Trigger: GAGATGAGGAACAGAACTTCAGTGACATACTTCATC...ACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218237.2 |
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| CDS-3UTR CCA 90 bp | ACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTGTAGAGTCACATGTGAAGTaGTCAATAGTGTTGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TRIRSSVLWLKLLHVACVESHVK*SIVLES Trigger: TGACTCCAACACTATTGACCACTTCACATGTGACTC...TACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059891.3 ENSMUST00000218237.2 |
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| CDS-3UTR CCA 90 bp | AACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTGTGAGTCACATGTGAAGTaGTCAATAGTGTTGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NKDTFISFMVETVTCCMCESHVK*SIVLES Trigger: TGACTCCAACACTATTGACCACTTCACATGTGACTC...ACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059891.3 ENSMUST00000218237.2 |
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| CDS-3UTR TCA 90 bp | AACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTGTTCTGTTCCTCATCTCTaGTGGTTTGTCTACAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: NKDTFISFMVETVTCCMCSVPHL*WFVYKK Trigger: TTTCTTGTAGACAAACCATCAGAGATGAGGAACAGA...ACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218237.2 |
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| CDS-3UTR TCA 90 bp | ACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTGTAAAGGAAAAACTCTGTTaGGCCAAGGAAGATAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TRIRSSVLWLKLLHVACVKEKLC*AKEDKE Trigger: TTCTTTATCTTCCTTGGCTCAACAGAGTTTTTCCTT...TACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059891.3 ENSMUST00000203598.3 ENSMUST00000218237.2 |
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| CDS-3UTR TCA 90 bp | AACAAGGATACGTTCATCAGTTTTATGGTTGAAACTGTTACATGTTGCATGTGTAAGGAAAAACTCTGTTaGGCCAAGGAAGATAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: NKDTFISFMVETVTCCMCKEKLC*AKEDKE Trigger: TTCTTTATCTTCCTTGGCTCAACAGAGTTTTTCCTT...ACACATGCAACATGTAACAGTTTCAACCATAAAACTGATGAACGTATCCTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059891.3 ENSMUST00000203598.3 ENSMUST00000218237.2 |
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