Pregenerated sensors for OLFR806 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071065Ensembl transcript IDs: ENSMUST00000213239.2, ENSMUST00000215142.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTTTGGTGTGCATATAGGATGGATCCCTAAGTGGGGCAGTCTCTaGATGGCCTTTCCTTCAGTCTCTGCTCCACTCGTTGCTCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: GFGVHIGWIPKWGSL*MAFPSVSAPLVAPA Trigger: TGCAGGAGCAACGAGTGGAGCAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCCACTTAGGGATCCATCCTATATGCACACCAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR CCA 90 bp | ACAACAGCGTCTGGGTTTGGTGTGCATATAGGATGGATCCCTAAGTaGGGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCTGCTCCACTC | + |
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Preference number: 1 (lower is better) Translates to: TTASGFGVHIGWIPK*GSLWMAFPSVSAPL Trigger: GAGTGGAGCAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCCACTTAGGGATCCATCCTATATGCACACCAAACCCAGACGCTGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR TCA 90 bp | GAAGAGACCTTAAGGGAGCTAAGAAGGAAAGGGTTTCAGAGAACCTaGATCTTGAAAGCAGAAGGGAGACTGCTTATGAGAAGGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: EETLRELRRKGFQRT*ILKAEGRLLMRRKG Trigger: TCCCTTCCTTCTCATAAGCAGTCTCCCTTCTGCTTTCAAGATTCAGGTTCTCTGAAACCCTTTCCTTCTTAGCTCCCTTAAGGTCTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR TCA 90 bp | AAATCTACCTGTAAAACTATCTCAACGACTACCCCTTGCCCAAATTaGCAGGCTGCTTCATCAAGTCAGTACAGGGAACAGATTATACCT | + |
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Preference number: 1 (lower is better) Translates to: KSTCKTISTTTPCPN*QAASSSQYREQIIP Trigger: AGGTATAATCTGTTCCCTGTACTGACTTGATGAAGCAGCCTGTCAATTTGGGCAAGGGGTAGTCGTTGAGATAGTTTTACAGGTAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213239.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTTATGCTGGGTCATCCACTGAGCCTCCACAGGACCAAGGGGCTCCCTTCGCCGTACCTAACCTCTaGAGGTCTCTACAGGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FPYAGSSTEPPQDQGAPFAVPNL*RSLQVL Trigger: GAGAACCTGTAGAGACCTCCAGAGGTTAGGTACGGC...GAAGGGAGCCCCTTGGTCCTGTGGAGGCTCAGTGGATGACCCAGCATAAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR CAA 90 bp | CCCTCCATGTGTACTCTTTGGTTGGTGGTTCTGTCCCTGGGAGCTTaGGTGGGGTCTGGTTGGTTGATACTACACCAGGCTCCTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PSMCTLWLVVLSLGA*VGSGWLILHQAPVS Trigger: GCTGACAGGAGCCTGGTGTAGTATCAACCAACCAGACCCCACCAAAGCTCCCAGGGACAGAACCACCAACCAAAGAGTACACATGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTGTCAGCAAGTGCTTCTTAGCATCAACAACAGCGTCTGGGTTTGGTGTGGGATGGATCCCTAAGTaGGGCAGTCTCTGGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: APVSKCFLASTTASGFGVGWIPK*GSLWMA Trigger: GGCCATCCAGAGACTGCCCCACTTAGGGATCCATCC...CACACCAAACCCAGACGCTGTTGTTGATGCTAAGAAGCACTTGCTGACAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCATCCACTGAGCCTCCACAGGACCAAGGGGCTCCCTTCCATTGATGCAGGATCCATGTGTACTCTTTaGTTGGTGGTTCTGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GHPLSLHRTKGLPSIDAGSMCTL*LVVLSL Trigger: CAGGGACAGAACCACCAACCAAAGAGTACACATGGA...TCCTGCATCAATGGAAGGGAGCCCCTTGGTCCTGTGGAGGCTCAGTGGATGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTGTCAGCAAGTGCTTCTTAGCATCAACAACAGCGTCTGGGTTTGGTGTGAAGTGGGGCAGTCTCTaGATGGCCTTTCCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: APVSKCFLASTTASGFGVKWGSL*MAFPSV Trigger: GACTGAAGGAAAGGCCATCCAGAGACTGCCCCACTT...CACACCAAACCCAGACGCTGTTGTTGATGCTAAGAAGCACTTGCTGACAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCCTTATGCTGGGTCATCCACTGAGCCTCCACAGGACCAAGGGGCTCCCTTCGATAAGATAATCCTCTaGTACATATGCAGCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: FPYAGSSTEPPQDQGAPFDKIIL*YICSCS Trigger: GCTACAGCTGCATATGTAGCAGAGGATTATCTTATC...GAAGGGAGCCCCTTGGTCCTGTGGAGGCTCAGTGGATGACCCAGCATAAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGGTTTCAGAGAACCTGAATCTTGAAAGCAGAAGGGAGACTGCTTATGAGAACAGCGTCTGGGTTTaGTGTGCATATAGGATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ERVSENLNLESRRETAYENSVWV*CAYRMD Trigger: ATCCATCCTATATGCACACCAAACCCAGACGCTGTT...CTCATAAGCAGTCTCCCTTCTGCTTTCAAGATTCAGGTTCTCTGAAACCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CCA 90 bp | CTGACGAAGAATATGACCACCTGCCCCTACACAAAACCCAGTACCAAACACAACAGGAAAGAAATGACATaGGCCATCATGGATGTATAT | + |
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Preference number: 2 (lower is better) Translates to: LTKNMTTCPYTKPSTKHNRKEMT*AIMDVY Trigger: ATATACATCCATGATGGCCCATGTCATTTCTTTCCT...GTTGTGTTTGGTACTGGGTTTTGTGTAGGGGCAGGTGGTCATATTCTTCGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213239.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGGTTTCAGAGAACCTGAATCTTGAAAGCAGAAGGGAGACTGCTTATGAGTCTCAGTCCATTATATaGCTCATGCTTCTCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: ERVSENLNLESRRETAYESQSII*LMLLIK Trigger: TTTGATGAGAAGCATGAGGCATATAATGGACTGAGA...CTCATAAGCAGTCTCCCTTCTGCTTTCAAGATTCAGGTTCTCTGAAACCCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGGTTTCAGAGAACCTGAATCTTGAAAGCAGAAGGGAGACTGCTTATGAGAGGAAAGAAATGACATaGGCCATCATGGATGTATAT | + |
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Preference number: 2 (lower is better) Translates to: ERVSENLNLESRRETAYERKEMT*AIMDVY Trigger: ATATACATCCATGATGGCCCATGTCATTTCTTTCCT...CTCATAAGCAGTCTCCCTTCTGCTTTCAAGATTCAGGTTCTCTGAAACCCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCATGCTTCTCATCAAAGGTCTCTTCAATCTTTAATTCCTTCATTCATGTCAGAGAAGCAAGACTTCTaGGCAGAGATAGAATTATAC | + |
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Preference number: 2 (lower is better) Translates to: PHASHQRSLQSLIPSFMSEKQDF*AEIELY Trigger: GTATAATTCTATCTCTGCTCAGAAGTCTTGCTTCTC...TGACATGAATGAAGGAATTAAAGATTGAAGAGACCTTTGATGAGAAGCATGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCATGCTTCTCATCAAAGGTCTCTTCAATCTTTAATTCCTTCATTCATGTCAGATAAGATAATCCTCTaGTACATATGCAGCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: PHASHQRSLQSLIPSFMSDKIIL*YICSCS Trigger: GCTACAGCTGCATATGTAGCAGAGGATTATCTTATC...TGACATGAATGAAGGAATTAAAGATTGAAGAGACCTTTGATGAGAAGCATGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR GCA 90 bp | ACATCTGCACTTATCTGTTCTGTTAACTCAACCTATATTCTGACGAAGAATATGGACACTGGATTTAATTaGAAACAGACTGGAAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: TSALICSVNSTYILTKNMDTGFN*KQTGRC Trigger: ACACCTTCCAGTCTGTTTGCAATTAAATCCAGTGTC...CATATTCTTCGTCAGAATATAGGTTGAGTTAACAGAACAGATAAGTGCAGATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213239.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTTATGCTGGGTCATCCACTGAGCCTCCACAGGACCAAGGGGCTCCCTTCCTGTCCCTGGGAGCTTaGGTGGGGTCTGGTTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: FPYAGSSTEPPQDQGAPFLSLGA*VGSGWL Trigger: CAACCAACCAGACCCCACCAAAGCTCCCAGGGACAG...GAAGGGAGCCCCTTGGTCCTGTGGAGGCTCAGTGGATGACCCAGCATAAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CAA 90 bp | CTTATGCTGGGTCATCCACTGAGCCTCCACAGGACCAAGGGGCTCCCTTCCATTCTGTCCCTGGGAGCTTaGGTGGGGTCTGGTTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: LMLGHPLSLHRTKGLPSILSLGA*VGSGWL Trigger: CAACCAACCAGACCCCACCAAAGCTCCCAGGGACAG...AATGGAAGGGAGCCCCTTGGTCCTGTGGAGGCTCAGTGGATGACCCAGCATAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CAA 90 bp | GGTCATCCACTGAGCCTCCACAGGACCAAGGGGCTCCCTTCCATTGATGCAGGACTCCATGTGTACTCTTaGGTTGGTGGTTCTGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GHPLSLHRTKGLPSIDAGLHVYS*VGGSVP Trigger: AGGGACAGAACCACCAACCAAAGAGTACACATGGAG...TCCTGCATCAATGGAAGGGAGCCCCTTGGTCCTGTGGAGGCTCAGTGGATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CAA 90 bp | ACCCACTCCCACCTCAGCACCCTAGCATTCCCTTATGCTGGGTCATCCACTGAGAGGGGCTCCCTTCCATaGATGCAGGATAAGATAATC | + |
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Preference number: 3 (lower is better) Translates to: THSHLSTLAFPYAGSSTERGSLP*MQDKII Trigger: GATTATCTTATCCTGCATCAATGGAAGGGAGCCCCT...CTCAGTGGATGACCCAGCATAAGGGAATGCTAGGGTGCTGAGGTGGGAGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR CCA 72 bp | GTGCATATAGGATGGATCCCTAAGTGGGGCAGTCTCTaGATGGCCTTTCCTTCAGTCTCTGCTCCACTCGTT | + |
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Preference number: 3 (lower is better) Translates to: VHIGWIPKWGSL*MAFPSVSAPLV Trigger: AACGAGTGGAGCAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCCACTTAGGGATCCATCCTATATGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR CCA 72 bp | TCTGGGTTTGGTGTGCATATAGGATGGATCCCTAAGTaGGGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SGFGVHIGWIPK*GSLWMAFPSVS Trigger: AGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCCACTTAGGGATCCATCCTATATGCACACCAAACCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR CCA 72 bp | TCAACAACAGCGTCTGGGTTTGGTGTGCATATAGGATaGATCCCTAAGTGGGGCAGTCTCTGGATGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: STTASGFGVHIG*IPKWGSLWMAF Trigger: AAAGGCCATCCAGAGACTGCCCCACTTAGGGATCCATCCTATATGCACACCAAACCCAGACGCTGTTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CAA 90 bp | GCTCCTGTCAGCAAGTGCTTCTTAGCATCAACAACAGCGTCTGGGTTTGGTGTGTCTCTGCTCCACTCGTaGCTCCTGCATTTCTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: APVSKCFLASTTASGFGVSLLHS*LLHFFL Trigger: CAAAAAGAAATGCAGGAGCAACGAGTGGAGCAGAGA...CACACCAAACCCAGACGCTGTTGTTGATGCTAAGAAGCACTTGCTGACAGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CAA 90 bp | CTGACGAAGAATATGACCACCTGCCCCTACACAAAACCCAGTACCAAACACAACTCTCTGCTCCACTCGTaGCTCCTGCATTTCTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LTKNMTTCPYTKPSTKHNSLLHS*LLHFFL Trigger: CAAAAAGAAATGCAGGAGCAACGAGTGGAGCAGAGA...GTTGTGTTTGGTACTGGGTTTTGTGTAGGGGCAGGTGGTCATATTCTTCGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213239.2 |
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| 3UTR TCA 72 bp | TGTAAAACTATCTCAACGACTACCCCTTGCCCAAATTaGCAGGCTGCTTCATCAAGTCAGTACAGGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: CKTISTTTPCPN*QAASSSQYREQ Trigger: CTGTTCCCTGTACTGACTTGATGAAGCAGCCTGTCAATTTGGGCAAGGGGTAGTCGTTGAGATAGTTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213239.2 |
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| 3UTR GCA 72 bp | AACTCAACCTATATTCTGACGAAGAATATGACCACCTaGCCCTACACAAAACCCAGTACCAAACACAACCCC | + |
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Preference number: 3 (lower is better) Translates to: NSTYILTKNMTT*PYTKPSTKHNP Trigger: GGGGTTGTGTTTGGTACTGGGTTTTGTGTAGGGGCAGGTGGTCATATTCTTCGTCAGAATATAGGTTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213239.2 |
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| 3UTR-3UTR CAA 90 bp | TTATTTACATTTCAAATGTTAGCTTCCTTCCCGGTTAAATCCCCTGTCCCCTCTCTCCTGCATTTCTTTTaGATAGGAGCAATTTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: LFTFQMLASFPVKSPVPSLLHFF*IGAILD Trigger: ATCCAAAATTGCTCCTATCAAAAAGAAATGCAGGAG...AGAGGGGACAGGGGATTTAACCGGGAAGGAAGCTAACATTTGAAATGTAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR GCA 72 bp | CTACAAAAGAAGCATCTCAGTCCATTATATGCCTCATaGTTCTCATCAAAGGTCTCTTCAATCTTTAATTCC | + |
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Preference number: 3 (lower is better) Translates to: LQKKHLSPLYAS*FSSKVSSIFNS Trigger: GGAATTAAAGATTGAAGAGACCTTTGATGAGAAGCATGAGGCATATAATGGACTGAGATGCTTCTTTTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR-3UTR CAA 90 bp | ACATCTGCACTTATCTGTTCTGTTAACTCAACCTATATTCTGACGAAGAATATGGCTATGTCGTTAGTTTaGTCAAAAATGGCTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: TSALICSVNSTYILTKNMAMSLV*SKMAQA Trigger: TGCTTGAGCCATTTTTGACAAAACTAACGACATAGC...CATATTCTTCGTCAGAATATAGGTTGAGTTAACAGAACAGATAAGTGCAGATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213239.2 |
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| 3UTR GCA 72 bp | TATAACTCTACAAAAGAAGCATCTCAGTCCATTATATaGCTCATGCTTCTCATCAAAGGTCTCTTCAATCTT | + |
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Preference number: 3 (lower is better) Translates to: YNSTKEASQSII*LMLLIKGLFNL Trigger: AAGATTGAAGAGACCTTTGATGAGAAGCATGAGGCATATAATGGACTGAGATGCTTCTTTTGTAGAGTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR TCA 90 bp | GCTCCTGTCAGCAAGTGCTTCTTAGCATCAACAACAGCGTCTGGGTTTGGTGTGCTGTCATCCAGGAGCTaGGGACCAGTATGTGGCACA | + |
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Preference number: 4 (lower is better) Translates to: APVSKCFLASTTASGFGVLSSRS*GPVCGT Trigger: TGTGCCACATACTGGTCCTCAGCTCCTGGATGACAG...CACACCAAACCCAGACGCTGTTGTTGATGCTAAGAAGCACTTGCTGACAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR CAA 72 bp | TGTACTCTTTGGTTGGTGGTTCTGTCCCTGGGAGCTTaGGTGGGGTCTGGTTGGTTGATACTACACCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: CTLWLVVLSLGA*VGSGWLILHQA Trigger: AGCCTGGTGTAGTATCAACCAACCAGACCCCACCAAAGCTCCCAGGGACAGAACCACCAACCAAAGAGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR TCA 90 bp | GAGATGGGTGGAGGCCCCATCTCTCAACCGAGAGCCGTACCTAACCTCTGGAGGTCAATCCCAACAAAATaGACACAATCTCTACTGACT | + |
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Preference number: 4 (lower is better) Translates to: EMGGGPISQPRAVPNLWRSIPTK*TQSLLT Trigger: AGTCAGTAGAGATTGTGTTCATTTTGTTGGGATTGA...CCTCCAGAGGTTAGGTACGGCTCTCGGTTGAGAGATGGGGCCTCCACCCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CCA 90 bp | GCTCCTGTCAGCAAGTGCTTCTTAGCATCAACAACAGCGTCTGGGTTTGGTGTGTCTGTGCAAGACAGCTaGAGGACAGGAGAAGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: APVSKCFLASTTASGFGVSVQDS*RTGEVS Trigger: TGACACTTCTCCTGTCCTCCAGCTGTCTTGCACAGA...CACACCAAACCCAGACGCTGTTGTTGATGCTAAGAAGCACTTGCTGACAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CCA 90 bp | GGTCATCCACTGAGCCTCCACAGGACCAAGGGGCTCCCTTCCATTGATGCAGGAAGTGATCTACAGTTTTaGAAGCACAGAATTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GHPLSLHRTKGLPSIDAGSDLQF*KHRIPV Trigger: AACTGGAATTCTGTGCTTCCAAAACTGTAGATCACT...TCCTGCATCAATGGAAGGGAGCCCCTTGGTCCTGTGGAGGCTCAGTGGATGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR TCA 90 bp | TGGGGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCTGCTCCACTCGTTGCTCCTTCAATCCCAACAAAATaGACACAATCTCTACTGACT | + |
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Preference number: 4 (lower is better) Translates to: WGSLWMAFPSVSAPLVAPSIPTK*TQSLLT Trigger: AGTCAGTAGAGATTGTGTTCATTTTGTTGGGATTGA...AGGAGCAACGAGTGGAGCAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR TCA 90 bp | GAAAGGGTTTCAGAGAACCTGAATCTTGAAAGCAGAAGGGAGACTGCTTATGAGCTGTCATCCAGGAGCTaGGGACCAGTATGTGGCACA | + |
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Preference number: 4 (lower is better) Translates to: ERVSENLNLESRRETAYELSSRS*GPVCGT Trigger: TGTGCCACATACTGGTCCTCAGCTCCTGGATGACAG...CTCATAAGCAGTCTCCCTTCTGCTTTCAAGATTCAGGTTCTCTGAAACCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CCA 90 bp | GAAAGGGTTTCAGAGAACCTGAATCTTGAAAGCAGAAGGGAGACTGCTTATGAGTCTGTGCAAGACAGCTaGAGGACAGGAGAAGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: ERVSENLNLESRRETAYESVQDS*RTGEVS Trigger: TGACACTTCTCCTGTCCTCCAGCTGTCTTGCACAGA...CTCATAAGCAGTCTCCCTTCTGCTTTCAAGATTCAGGTTCTCTGAAACCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| 3UTR CAA 72 bp | TCTGGATGGCCTTTCCTTCAGTCTCTGCTCCACTCGTaGCTCCTGCATTTCTTTTTGATAGGAGCAATTTTG | + |
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Preference number: 4 (lower is better) Translates to: SGWPFLQSLLHS*LLHFFLIGAIL Trigger: CAAAATTGCTCCTATCAAAAAGAAATGCAGGAGCAACGAGTGGAGCAGAGACTGAAGGAAAGGCCATCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CCA 90 bp | GAAAGGGTTTCAGAGAACCTGAATCTTGAAAGCAGAAGGGAGACTGCTTATGAGCTGAGGACCAGTATGTaGCACACTTTGCTATTCATG | + |
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Preference number: 4 (lower is better) Translates to: ERVSENLNLESRRETAYELRTSM*HTLLFM Trigger: CATGAATAGCAAAGTGTGCCACATACTGGTCCTCAG...CTCATAAGCAGTCTCCCTTCTGCTTTCAAGATTCAGGTTCTCTGAAACCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CCA 90 bp | CTGACGAAGAATATGACCACCTGCCCCTACACAAAACCCAGTACCAAACACAACTTAAAGGAGGAAAGATaGATAAAAACCCTGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: LTKNMTTCPYTKPSTKHNLKEER*IKTLSS Trigger: GGATGACAGGGTTTTTATCCATCTTTCCTCCTTTAA...GTTGTGTTTGGTACTGGGTTTTGTGTAGGGGCAGGTGGTCATATTCTTCGTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213239.2 |
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| CDS-3UTR CCA 90 bp | CCACTCGTTGCTCCTGCATTTCTTTTTGATAGGAGCAATTTTGGATTAATATTTCTGAGGACCAGTATGTaGCACACTTTGCTATTCATG | + |
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Preference number: 4 (lower is better) Translates to: PLVAPAFLFDRSNFGLIFLRTSM*HTLLFM Trigger: CATGAATAGCAAAGTGTGCCACATACTGGTCCTCAG...AAATATTAATCCAAAATTGCTCCTATCAAAAAGAAATGCAGGAGCAACGAGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR TCA 90 bp | CCACTCGTTGCTCCTGCATTTCTTTTTGATAGGAGCAATTTTGGATTAATATTTGTGTCACACAAGAAGTaGTCTACAGTTTTGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PLVAPAFLFDRSNFGLIFVSHKK*STVLEA Trigger: TGCTTCCAAAACTGTAGATCACTTCTTGTGTGACAC...AAATATTAATCCAAAATTGCTCCTATCAAAAAGAAATGCAGGAGCAACGAGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CCA 90 bp | CATTATATGCCTCATGCTTCTCATCAAAGGTCTCTTCAATCTTTAATTCCTTCATTAAAGGAGGAAAGATaGATAAAAACCCTGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: HYMPHASHQRSLQSLIPSLKEER*IKTLSS Trigger: GGATGACAGGGTTTTTATCCATCTTTCCTCCTTTAA...TGAAGGAATTAAAGATTGAAGAGACCTTTGATGAGAAGCATGAGGCATATAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CAA 90 bp | TTCCCTTATGCTGGGTCATCCACTGAGCCTCCACAGGACCAAGGGGCTCCCTTCAAGCTCACCCTCTCCTaGGCTGATGTTTTAATGTAC | + |
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Preference number: 5 (lower is better) Translates to: FPYAGSSTEPPQDQGAPFKLTLS*ADVLMY Trigger: GTACATTAAAACATCAGCCAAGGAGAGGGTGAGCTT...GAAGGGAGCCCCTTGGTCCTGTGGAGGCTCAGTGGATGACCCAGCATAAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CAA 90 bp | CTCTGGATGGCCTTTCCTTCAGTCTCTGCTCCACTCGTTGCTCCTGCATTTCTTATAATGACACAATCTTaGAAGCACCTGTTTGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: LWMAFPSVSAPLVAPAFLIMTQS*KHLFES Trigger: GCTTTCAAACAGGTGCTTCAAAGATTGTGTCATTAT...AAGAAATGCAGGAGCAACGAGTGGAGCAGAGACTGAAGGAAAGGCCATCCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CAA 90 bp | CCTCATGCTTCTCATCAAAGGTCTCTTCAATCTTTAATTCCTTCATTCATGTCAAAGCTCACCCTCTCCTaGGCTGATGTTTTAATGTAC | + |
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Preference number: 5 (lower is better) Translates to: PHASHQRSLQSLIPSFMSKLTLS*ADVLMY Trigger: GTACATTAAAACATCAGCCAAGGAGAGGGTGAGCTT...TGACATGAATGAAGGAATTAAAGATTGAAGAGACCTTTGATGAGAAGCATGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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| CDS-3UTR CAA 90 bp | CCACTCGTTGCTCCTGCATTTCTTTTTGATAGGAGCAATTTTGGATTAATATTTATAATGACACAATCTTaGAAGCACCTGTTTGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: PLVAPAFLFDRSNFGLIFIMTQS*KHLFES Trigger: GCTTTCAAACAGGTGCTTCAAAGATTGTGTCATTAT...AAATATTAATCCAAAATTGCTCCTATCAAAAAGAAATGCAGGAGCAACGAGTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213239.2 ENSMUST00000215142.3 |
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