Pregenerated sensors for OLFR800 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000108114Ensembl transcript IDs: ENSMUST00000104903.4, ENSMUST00000217094.2
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGTCTATGTTTGACTAAGCCCATTTCCTTCAGGCTAGGTCAGTCTCTCAAGGACAGAACTTTATTATGGTaGCTGGTGCCAAGGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: CLCLTKPISFRLGQSLKDRTLLW*LVPRSS Trigger: TGAGGACCTTGGCACCAGGCACCATAATAAAGTTCT...GTCCTTGAGAGACTGACCTAGCCTGAAGGAAATGGGCTTAGTCAAACATAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTATGTTTGACTAAGCCCATTTCCTTCAGGCTAGGTCAGTCTCTCAAGGACCCTGAACAAATTCCCTaGGGACACCAAGAAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: CLCLTKPISFRLGQSLKDPEQIP*GHQEIE Trigger: TTCTATTTCTTGGTGTCCTCAGGGAATTTGTTCAGG...GTCCTTGAGAGACTGACCTAGCCTGAAGGAAATGGGCTTAGTCAAACATAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTATGTTTGACTAAGCCCATTTCCTTCAGGCTAGGTCAGTCTCTCAAGGACAATAGAACTTTATTATaGTGCCTGGTGCCAAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: CLCLTKPISFRLGQSLKDNRTLL*CLVPRS Trigger: GGACCTTGGCACCAGGCACCATAATAAAGTTCTATT...GTCCTTGAGAGACTGACCTAGCCTGAAGGAAATGGGCTTAGTCAAACATAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| 3UTR GCA 72 bp | ATAAAGTACCAGAGTTACCTCCTTAGCTACAGTTCATaGAGGAGTCAACTAAAAGATGGGAAACATTTTAAC | + |
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Preference number: 3 (lower is better) Translates to: IKYQSYLLSYSS*RSQLKDGKHFN Trigger: GTTAAAATGTTTCCCATCTTTTAGTTGACTCCTGCATGAACTGTAGCTAAGGAGGTAACTCTGGTACTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTAGGTCAGTCTCTCAAGGACATATGTGTAAGCAGAGGAACTTGTCAGGGGAGCAATGGAAGTGGTaGGAATCGTCACACCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: QARSVSQGHMCKQRNLSGEQWKW*ESSHPC Trigger: ACAAGGGTGTGACGATTCTCACCACTTCCATTGCTC...CCCTGACAAGTTCCTCTGCTTACACATATGTCCTTGAGAGACTGACCTAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR CCA 90 bp | ATTATGGTGCCTGGTGCCAAGGTCCTCATGAAAGCTGACGTTAGAATAGACAATGCCCAGGCTAAGTGGTaGCAGGATTACAAACAAGCC | + |
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Preference number: 4 (lower is better) Translates to: IMVPGAKVLMKADVRIDNAQAKW*QDYKQA Trigger: GGCTTGTTTGTAATCCTGCCACCACTTAGCCTGGGC...ATTGTCTATTCTAACGTCAGCTTTCATGAGGACCTTGGCACCAGGCACCATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTAGGTCAGTCTCTCAAGGACATATGTGTAAGCAGAGGAACTTGTCAGGGCAAACTATCACTATCTaGTCTATGAGCCATGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QARSVSQGHMCKQRNLSGQTITI*SMSHVS Trigger: AGAAACATGGCTCATAGAGCAGATAGTGATAGTTTG...CCCTGACAAGTTCCTCTGCTTACACATATGTCCTTGAGAGACTGACCTAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR TCA 90 bp | ATTATGGTGCCTGGTGCCAAGGTCCTCATGAAAGCTGACGTTAGAATAGACAATTCACTATCTGCTCTATaGGCCATGTTTCTGTACATG | + |
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Preference number: 4 (lower is better) Translates to: IMVPGAKVLMKADVRIDNSLSAL*AMFLYM Trigger: CATGTACAGAAACATGGCTCATAGAGCAGATAGTGA...ATTGTCTATTCTAACGTCAGCTTTCATGAGGACCTTGGCACCAGGCACCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGGTCCTCATGAAAGCTGACGTTAGAATAGACAATAGACACAATTATTCACAGAGTTTTCAGTTGTaGGTCATCCGTCAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AKVLMKADVRIDNRHNYSQSFQL*VIRQSQ Trigger: CTGGGACTGACGGATGACCCACAACTGAAAACTCTG...TGAATAATTGTGTCTATTGTCTATTCTAACGTCAGCTTTCATGAGGACCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR GCA 90 bp | GCCAAGGTCCTCATGAAAGCTGACGTTAGAATAGACAATAGACACAATTATTCATACAAACAAGCCAGCTaGCCAGCAACAGAGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: AKVLMKADVRIDNRHNYSYKQAS*PATEDK Trigger: CTTATCCTCTGTTGCTGGGCAGCTGGCTTGTTTGTA...TGAATAATTGTGTCTATTGTCTATTCTAACGTCAGCTTTCATGAGGACCTTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR TCA 90 bp | GCCAAGGTCCTCATGAAAGCTGACGTTAGAATAGACAATAGACACAATTATTCATCAGTCCCAGTAGGATaGATGTTGTTATGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: AKVLMKADVRIDNRHNYSSVPVG*MLLWCG Trigger: ACCACACCATAACAACATTCATCCTACTGGGACTGA...TGAATAATTGTGTCTATTGTCTATTCTAACGTCAGCTTTCATGAGGACCTTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS GCA 90 bp | CTTGAGGCCCAGGCTAAGTGGTGGCAGGATTACAAACAAGCCAGCTaGCCAGCAACAGAGGATAAGTCTTGTACAGATCCTGCTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LEAQAKWWQDYKQAS*PATEDKSCTDPAAH Trigger: ATGAGCAGCAGGATCTGTACAAGACTTATCCTCTGTTGCTGGGCAGCTGGCTTGTTTGTAATCCTGCCACCACTTAGCCTGGGCCTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104903.4 ENSMUST00000217094.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTAGGTCAGTCTCTCAAGGACATATGTGTAAGCAGAGGAACTTGTCAGGGGATCAGAGTTTTCAGTaGTGGGTCATCCGTCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: QARSVSQGHMCKQRNLSGDQSFQ*WVIRQS Trigger: GGACTGACGGATGACCCACAACTGAAAACTCTGATC...CCCTGACAAGTTCCTCTGCTTACACATATGTCCTTGAGAGACTGACCTAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR CAA 90 bp | TGTCTATGTTTGACTAAGCCCATTTCCTTCAGGCTAGGTCAGTCTCTCAAGGACTCACAGAATTCCAGCTaGAGGCCCAGGCTAAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: CLCLTKPISFRLGQSLKDSQNSS*RPRLSG Trigger: ACCACTTAGCCTGGGCCTCAAGCTGGAATTCTGTGA...GTCCTTGAGAGACTGACCTAGCCTGAAGGAAATGGGCTTAGTCAAACATAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR CAA 90 bp | TGTCTATGTTTGACTAAGCCCATTTCCTTCAGGCTAGGTCAGTCTCTCAAGGACTCTTTAGGAGGGGGTTaGCATCACAGACAAAATGGT | + |
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Preference number: 5 (lower is better) Translates to: CLCLTKPISFRLGQSLKDSLGGG*HHRQNG Trigger: ACCATTTTGTCTGTGATGCAAACCCCCTCCTAAAGA...GTCCTTGAGAGACTGACCTAGCCTGAAGGAAATGGGCTTAGTCAAACATAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR CAA 90 bp | ATTATGGTGCCTGGTGCCAAGGTCCTCATGAAAGCTGACGTTAGAATAGACAATATCGTCACACCCTTGTaGATAGTCACTGAGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: IMVPGAKVLMKADVRIDNIVTPL*IVTESF Trigger: AAAGGACTCAGTGACTATCAACAAGGGTGTGACGAT...ATTGTCTATTCTAACGTCAGCTTTCATGAGGACCTTGGCACCAGGCACCATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS-3UTR CAA 90 bp | ATTATGGTGCCTGGTGCCAAGGTCCTCATGAAAGCTGACGTTAGAATAGACAATGAAGGCCTGCTTGACTaGTTTGTTCCTCAATGTATA | + |
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Preference number: 5 (lower is better) Translates to: IMVPGAKVLMKADVRIDNEGLLD*FVPQCI Trigger: TATACATTGAGGAACAAACAAGTCAAGCAGGCCTTC...ATTGTCTATTCTAACGTCAGCTTTCATGAGGACCTTGGCACCAGGCACCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217094.2 |
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| CDS CAA 72 bp | GGAGCAATGGAAGTGGTGAGAATCGTCACACCCTTGTaGATAGTCACTGAGTCCTTTGCTGATGGTTTGATG | + |
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Preference number: 6 (lower is better) Translates to: GAMEVVRIVTPL*IVTESFADGLM Trigger: CATCAAACCATCAGCAAAGGACTCAGTGACTATCAACAAGGGTGTGACGATTCTCACCACTTCCATTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104903.4 ENSMUST00000217094.2 |
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| CDS CAA 72 bp | ATAGGAGCAATGGAAGTGGTGAGAATCGTCACACCCTaGTTGATAGTCACTGAGTCCTTTGCTGATGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: IGAMEVVRIVTP*LIVTESFADGL Trigger: CAAACCATCAGCAAAGGACTCAGTGACTATCAACAAGGGTGTGACGATTCTCACCACTTCCATTGCTCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104903.4 ENSMUST00000217094.2 |
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| CDS GCA 72 bp | GCTTACACACACAAGGGTCATGATAAATGTAAACACTaGACAAACTATCACTATCTGCTCTATGAGCCATGT | + |
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Preference number: 6 (lower is better) Translates to: AYTHKGHDKCKH*TNYHYLLYEPC Trigger: ACATGGCTCATAGAGCAGATAGTGATAGTTTGTGCAGTGTTTACATTTATCATGACCCTTGTGTGTGTAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104903.4 ENSMUST00000217094.2 |
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| CDS CAA 72 bp | TTCTGGAAGAACAGCACAATTCTTTTAACTGAGTCATaGAAGGCCTGCTTGACTTGTTTGTTCCTCAATGTA | + |
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Preference number: 6 (lower is better) Translates to: FWKNSTILLTES*KACLTCLFLNV Trigger: TACATTGAGGAACAAACAAGTCAAGCAGGCCTTCAATGACTCAGTTAAAAGAATTGTGCTGTTCTTCCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104903.4 ENSMUST00000217094.2 |
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