Pregenerated sensors for OLFR8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094080Ensembl transcript IDs: ENSMUST00000081571.2, ENSMUST00000203851.2, ENSMUST00000214952.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTCCAAACCTTCCAAAAATATTCATAGGTATCTTATCCCTTTATaGTCTGAAGACATAGTCCCAATCTCTGGCTCTGCAGCTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: FSKPSKNIHRYLIPL*SEDIVPISGSAASQ Trigger: CTGTGAAGCTGCAGAGCCAGAGATTGGGACTATGTCTTCAGACCATAAAGGGATAAGATACCTATGAATATTTTTGGAAGGTTTGGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR GCA 90 bp | TATCACAGGAATATATTATTGTATCATACCCACAGTATTAACAACTaGACCAGGCAAAACACAGGACATTTCTATCAGCAAAATATCACC | + |
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Preference number: 1 (lower is better) Translates to: YHRNILLYHTHSINN*TRQNTGHFYQQNIT Trigger: GGTGATATTTTGCTGATAGAAATGTCCTGTGTTTTGCCTGGTGCAGTTGTTAATACTGTGGGTATGATACAATAATATATTCCTGTGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAGGACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATAAAGAGCCAACTAACCTaGGCCTCTGGGAGCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: TQDISISKISPLLPFKAIKSQLT*ASGSSQ Trigger: CTGTGAGCTCCCAGAGGCCCAGGTTAGTTGGCTCTT...TATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR CAA 90 bp | GCACCAGGCAAAACACAGGACATTTCTATCAGCAAAATATCACCATaGTTGCCCTTTAAGGCCATATTAGCCTCTCTCCTTTACCATAAT | + |
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Preference number: 2 (lower is better) Translates to: APGKTQDISISKISP*LPFKAILASLLYHN Trigger: ATTATGGTAAAGGAGAGAGGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGTTTTGCCTGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR-3UTR TCA 90 bp | GACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATTAGCCAGGTATCTAGAAAGTTaGGAAAGGGTGATGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: DISISKISPLLPFKAILARYLES*ERVMHP Trigger: GGGATGCATCACCCTTTCTCAACTTTCTAGATACCT...GGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR-3UTR TCA 90 bp | GACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATTAGCCAGGCGCCCACTAATATaGAGGGATAACAATCCCATA | + |
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Preference number: 2 (lower is better) Translates to: DISISKISPLLPFKAILARRPLI*RDNNPI Trigger: TATGGGATTGTTATCCCTTCATATTAGTGGGCGCCT...GGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR CAA 90 bp | CCAGGCAAAACACAGGACATTTCTATCAGCAAAATATCACCATTGTaGCCCTTTAAGGCCATATTAGCCTCTCTCCTTTACCATAATATG | + |
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Preference number: 2 (lower is better) Translates to: PGKTQDISISKISPL*PFKAILASLLYHNM Trigger: CATATTATGGTAAAGGAGAGAGGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGTTTTGCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR-3UTR GCA 90 bp | GACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATTAGCCTGCAGCTTCACAGTCTaGAATAATGGAAACTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: DISISKISPLLPFKAILACSFTV*NNGNFS Trigger: GCTGAAGTTTCCATTATTGCAGACTGTGAAGCTGCA...GGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR-3UTR TCA 90 bp | GACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATTAGCCATTCCTTGTTGTTTCTaGTATGCCTTTCCTGTCACT | + |
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Preference number: 2 (lower is better) Translates to: DISISKISPLLPFKAILAIPCCF*YAFPVT Trigger: AGTGACAGGAAAGGCATATCAGAAACAACAAGGAAT...GGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAGGACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATAACAATGTTGGTAGACTaGATCCATAGACTCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: TQDISISKISPLLPFKAITMLVD*IHRLSS Trigger: ACTTGAGAGTCTATGGATTCAGTCTACCAACATTGT...TATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAGGACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATCCTTTACCATAATATaGCACCAAAGAACCACTAGA | + |
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Preference number: 2 (lower is better) Translates to: TQDISISKISPLLPFKAISFTII*HQRTTR Trigger: TCTAGTGGTTCTTTGGTGTCATATTATGGTAAAGGA...TATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR-3UTR GCA 90 bp | GACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATTAGCCTTGTTGTTTCTGATATaGCTTTCCTGTCACTATAAC | + |
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Preference number: 2 (lower is better) Translates to: DISISKISPLLPFKAILALLFLI*LSCHYN Trigger: GTTATAGTGACAGGAAAGGCATATCAGAAACAACAA...GGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR TCA 72 bp | CATATGTGTGTGGGATATCATAGGCGCCCACTAATATaGAGGGATAACAATCCCATAGGAAGACCAAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: HMCVGYHRRPLI*RDNNPIGRPRA Trigger: GGCTCTTGGTCTTCCTATGGGATTGTTATCCCTTCATATTAGTGGGCGCCTATGATATCCCACACACATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR GCA 72 bp | CATAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTaGAATAATGGAAACTTCAGCCAGTCCAATGATACA | + |
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Preference number: 3 (lower is better) Translates to: HSPNLWLCSFTV*NNGNFSQSNDT Trigger: TGTATCATTGGACTGGCTGAAGTTTCCATTATTGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR TCA 72 bp | GTGTTTTGCCTGCATATATATATATGCATGCATGCGTaGTGCTGGAAACATCAGAAGAGCGGGTCAAATCTC | + |
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Preference number: 3 (lower is better) Translates to: VFCLHIYICMHA*CWKHQKSGSNL Trigger: GAGATTTGACCCGCTCTTCTGATGTTTCCAGCATCACGCATGCATGCATATATATATATGCAGGCAAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR CCA 72 bp | AATGTTGCTGACCCAAACACATTGAGTACTGTGTTTTaGAATAACTCTGGGAAGCCAGGACTACTACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NVADPNTLSTVF*NNSGKPGLLQK Trigger: CTTCTGTAGTAGTCCTGGCTTCCCAGAGTTATTCCAAAACACAGTACTCAATGTGTTTGGGTCAGCAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR GCA 72 bp | TTGAGTGTTTTGCCTGCATATATATATATGCATGCATaGGTGATGCTGGAAACATCAGAAGAGCGGGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LSVLPAYIYMHA*VMLETSEERVK Trigger: TTTGACCCGCTCTTCTGATGTTTCCAGCATCACGCATGCATGCATATATATATATGCAGGCAAAACACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR TCA 72 bp | GGGAATTATTTTCAAATGTTGCTGACCCAAACACATTaGGTACTGTGTTTTGGAATAACTCTGGGAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GNYFQMLLTQTH*VLCFGITLGSQ Trigger: CTGGCTTCCCAGAGTTATTCCAAAACACAGTACTCAATGTGTTTGGGTCAGCAACATTTGAAAATAATTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR TCA 72 bp | AATCTCCTTAAAACTGAGGTCATAGACTGTTGTGTGTaGGCAGCCTTGTGGGTACTAGAAATGTCACTAATA | + |
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Preference number: 3 (lower is better) Translates to: NLLKTEVIDCCV*AALWVLEMSLI Trigger: TATTAGTGACATTTCTAGTACCCACAAGGCTGCTCACACACAACAGTCTATGACCTCAGTTTTAAGGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR TCA 72 bp | TTTTGCTCTGGAGAGCAGCATTTACTCTTCTACCTTTaGACACTTTCTCCAAACCTTCCAAAAATATTCATA | + |
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Preference number: 3 (lower is better) Translates to: FCSGEQHLLFYL*TLSPNLPKIFI Trigger: TATGAATATTTTTGGAAGGTTTGGAGAAAGTGTTCAAAGGTAGAAGAGTAAATGCTGCTCTCCAGAGCAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR TCA 72 bp | CAAATTGTTACACTTGAATATACTCATGTGAAAGAGTaGTCACACTGCAGTTTTGTTAGAAGCTATCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: QIVTLEYTHVKE*SHCSFVRSYLG Trigger: TCCTAGATAGCTTCTAACAAAACTGCAGTGTGATCACTCTTTCACATGAGTATATTCAAGTGTAACAATTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR GCA 72 bp | AATATATTATTGTATCATACCCACAGTATTAACAACTaGACCAGGCAAAACACAGGACATTTCTATCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: NILLYHTHSINN*TRQNTGHFYQQ Trigger: TTGCTGATAGAAATGTCCTGTGTTTTGCCTGGTGCAGTTGTTAATACTGTGGGTATGATACAATAATATATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR TCA 90 bp | TTATGGTCTGAAGACATAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTGCATCTAAACATGTGAGTTaGGACAGCTGGTTAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LWSEDIVPISGSAASQSASKHVS*DSWLSS Trigger: TGAGCTTAACCAGCTGTCTCAACTCACATGTTTAGA...TGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTATGTCTTCAGACCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR TCA 90 bp | ACACAGGACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATAGCTCTTGCAGCAGAGTaGGAGCTTTGGACCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: TQDISISKISPLLPFKAIALAAE*ELWTTA Trigger: TGCTGTGGTCCAAAGCTCTCACTCTGCTGCAAGAGC...TATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR TCA 90 bp | TTATGGTCTGAAGACATAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTGCAGTACAAGATTCATTATaGGGTGGCTTGATAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LWSEDIVPISGSAASQSAVQDSL*GGLISC Trigger: ACAGCTTATCAAGCCACCTCATAATGAATCTTGTAC...TGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTATGTCTTCAGACCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR TCA 90 bp | ACACAGGACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATAGCCGTGTACTTCCCTTaGACTGAGGAGATAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: TQDISISKISPLLPFKAIAVYFP*TEEIEH Trigger: ATGTTCTATCTCCTCAGTTCAAGGGAAGTACACGGC...TATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR CAA 72 bp | GCAGGGTCCTTAGAGACTTCATCCAAGGATTCCTTGTaGTTTCTGATATGCCTTTCCTGTCACTATAACATA | + |
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Preference number: 4 (lower is better) Translates to: AGSLETSSKDSL*FLICLSCHYNI Trigger: TATGTTATAGTGACAGGAAAGGCATATCAGAAACAACAAGGAATCCTTGGATGAAGTCTCTAAGGACCCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR CAA 72 bp | ACACAGGACATTTCTATCAGCAAAATATCACCATTGTaGCCCTTTAAGGCCATATTAGCCTCTCTCCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: TQDISISKISPL*PFKAILASLLY Trigger: GTAAAGGAGAGAGGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR CCA 90 bp | ACACAGGACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATAAGCTCACAGAAGAAGTaGGGAATTTTTACATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQDISISKISPLLPFKAISSQKK*GIFTSP Trigger: TGGAGATGTAAAAATTCCCCACTTCTTCTGTGAGCT...TATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR CAA 72 bp | AGGGAATTATTTTCAAATGTTGCTGACCCAAACACATaGAGTACTGTGTTTTGGAATAACTCTGGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RELFSNVADPNT*STVFWNNSGKP Trigger: TGGCTTCCCAGAGTTATTCCAAAACACAGTACTCAATGTGTTTGGGTCAGCAACATTTGAAAATAATTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| 3UTR CAA 72 bp | AAAACACAGGACATTTCTATCAGCAAAATATCACCATaGTTGCCCTTTAAGGCCATATTAGCCTCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KTQDISISKISP*LPFKAILASLL Trigger: AAGGAGAGAGGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR TCA 90 bp | GACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATTAGCCACAAAAATGAGGAATTaGAGGTGTGGGTTTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: DISISKISPLLPFKAILATKMRN*RCGFSE Trigger: TTCAGAAAACCCACACCTTCAATTCCTCATTTTTGT...GGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR TCA 90 bp | TCCAAAAATATTCATAGGTATCTTATCCCTTTATGGTCTGAAGACATAGTCCCAGTACTTCCCTTGAACTaGGGAGATAGAACATATGGA | + |
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Preference number: 4 (lower is better) Translates to: SKNIHRYLIPLWSEDIVPVLPLN*GDRTYG Trigger: TCCATATGTTCTATCTCCTCAGTTCAAGGGAAGTAC...TGGGACTATGTCTTCAGACCATAAAGGGATAAGATACCTATGAATATTTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR CCA 90 bp | GACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATTAGCCAAAATAAGAAGACAATaGAAAGGTGAGAGACACATG | + |
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Preference number: 4 (lower is better) Translates to: DISISKISPLLPFKAILAKIRRQ*KGERHM Trigger: CATGTGTCTCTCACCTTTCCATTGTCTTCTTATTTT...GGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAAATATTCATAGGTATCTTATCCCTTTATGGTCTGAAGACATAGTCCCAGAATGTGTAATACAATaGGTGACAGATAGCCACATA | + |
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Preference number: 4 (lower is better) Translates to: SKNIHRYLIPLWSEDIVPECVIQ*VTDSHI Trigger: TATGTGGCTATCTGTCACCCATTGTATTACACATTC...TGGGACTATGTCTTCAGACCATAAAGGGATAAGATACCTATGAATATTTTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR CAA 90 bp | TTATGGTCTGAAGACATAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTGCAACAGCCAGGAGAAAGTaGTCCAATTCTGCAAAAACC | + |
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Preference number: 5 (lower is better) Translates to: LWSEDIVPISGSAASQSATARRK*SNSAKT Trigger: GGTTTTTGCAGAATTGGACAACTTTCTCCTGGCTGT...TGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTATGTCTTCAGACCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR CAA 90 bp | TTATGGTCTGAAGACATAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTGCAAACTTGGAATTCTTCTaGTGCTGTTGCCTGATTCCA | + |
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Preference number: 5 (lower is better) Translates to: LWSEDIVPISGSAASQSANLEFF*CCCLIP Trigger: TGGAATCAGGCAACAGCACAAGAAGAATTCCAAGTT...TGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTATGTCTTCAGACCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS-3UTR CAA 90 bp | ACACAGGACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATAACATCACAGAGGCTCTaGCAGCAGAGTGAGAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: TQDISISKISPLLPFKAITSQRL*QQSESF Trigger: AAAGCTCTCACTCTGCTGCAAGAGCCTCTGTGATGT...TATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTCCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS TCA 90 bp | AAGGTGAGAGACACATGTAGAAAATGCCGTGTACTTCCCTTGAACTaGGGAGATAGAACATATGGAGGACACTATCTTGAAATAAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: KVRDTCRKCRVLPLN*GDRTYGGHYLEIRV Trigger: TACTCTTATTTCAAGATAGTGTCCTCCATATGTTCTATCTCCTCAGTTCAAGGGAAGTACACGGCATTTTCTACATGTGTCTCTCACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081571.2 ENSMUST00000203851.2 ENSMUST00000214952.2 |
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| CDS GCA 90 bp | CAATTCTGCAAAAACCAAGAAGACAGACATCTGGCTAATACAGTCTaGATATGTAATGGCCTTGCTTTGAGTCTGTATATTTACCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: QFCKNQEDRHLANTV*ICNGLALSLYIYQH Trigger: ATGCTGGTAAATATACAGACTCAAAGCAAGGCCATTACATATGCAGACTGTATTAGCCAGATGTCTGTCTTCTTGGTTTTTGCAGAATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081571.2 ENSMUST00000203851.2 ENSMUST00000214952.2 |
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| CDS-3UTR CAA 90 bp | GACATTTCTATCAGCAAAATATCACCATTGTTGCCCTTTAAGGCCATATTAGCCTGTAATGGCCTTGCTTaGAGTCTGTATATTTACCAG | + |
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Preference number: 5 (lower is better) Translates to: DISISKISPLLPFKAILACNGLA*SLYIYQ Trigger: CTGGTAAATATACAGACTCAAAGCAAGGCCATTACA...GGCTAATATGGCCTTAAAGGGCAACAATGGTGATATTTTGCTGATAGAAATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214952.2 |
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| CDS TCA 72 bp | GACACATGTAGAAAATGCCGTGTACTTCCCTTGAACTaGGGAGATAGAACATATGGAGGACACTATCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: DTCRKCRVLPLN*GDRTYGGHYLE Trigger: TTCAAGATAGTGTCCTCCATATGTTCTATCTCCTCAGTTCAAGGGAAGTACACGGCATTTTCTACATGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081571.2 ENSMUST00000203851.2 ENSMUST00000214952.2 |
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