Pregenerated sensors for OLFR796 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052012Ensembl transcript IDs: ENSMUST00000037071.5, ENSMUST00000214584.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATACAAGGACTGGAAAGATGGCTCAGCGGTTAAGAGCACTGACTaGTATTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATATGGT | + |
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Preference number: 1 (lower is better) Translates to: AYKDWKDGSAVKSTD*YSKGPEFKSQQPYG Trigger: ACCATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAATAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTTTCCAGTCCTTGTATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR CCA 90 bp | AAGTTATCCTCCCAGAGAGGAATGTCTATGAAGCAGAAGGGCTGTTaGAAGGATCGCTTAAAAATGGTTTCTCAAACTCCAGTCCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: KLSSQRGMSMKQKGC*KDRLKMVSQTPVPH Trigger: ATGGGGGACTGGAGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTCATAGACATTCCTCTCTGGGAGGATAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR TCA 90 bp | GTGGGAATAGGAGACTCTGGAAATAAACTTAAAATAGGAGATAGATaGCCATACAGAGGATTCCTCTGGTTAAGTTATCCTCCCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: VGIGDSGNKLKIGDR*PYRGFLWLSYPPRE Trigger: CTCTCTGGGAGGATAACTTAACCAGAGGAATCCTCTGTATGGTCATCTATCTCCTATTTTAAGTTTATTTCCAGAGTCTCCTATTCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR GCA 90 bp | TCAGAGAATGTTTCTTTCCCAAGGCAAGGATCCCTTATATCCCGATaGTTCTTAATAAATTCCACTTCAATAGTGAATCTGGGATATGGA | + |
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Preference number: 1 (lower is better) Translates to: SENVSFPRQGSLISR*FLINSTSIVNLGYG Trigger: TCCATATCCCAGATTCACTATTGAAGTGGAATTTATTAAGAAGCATCGGGATATAAGGGATCCTTGCCTTGGGAAAGAAACATTCTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR GCA 90 bp | TTGGTGTCCACAGCGAACTGTATTACTTATTATATGCAAGAGGACTaGCTTTATGGACAGAAGAAAACAAAACTCCTGGTAAATCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: LVSTANCITYYMQED*LYGQKKTKLLVNQK Trigger: TTTTTGATTTACCAGGAGTTTTGTTTTCTTCTGTCCATAAAGGCAGTCCTCTTGCATATAATAAGTAATACAGTTCGCTGTGGACACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR TCA 90 bp | CCCATTACTGTCTGTTGTCTCCTCCAACTGATGGTACCTTTTCTCCTTCCAAATTGGGAGCAGGAACACTaGACAAGTGAAAGCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: PITVCCLLQLMVPFLLPNWEQEH*TSESTP Trigger: TGGGGTGCTTTCACTTGTTCAGTGTTCCTGCTCCCA...ATTTGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR TCA 90 bp | GCGGTTAAGAGCACTGACTGCTATTCCAAAGGTCCTGAGTTCAAATCCCAGCAAAGAGAGGAATGTCTATaGAGCAGAAGGGCTGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: AVKSTDCYSKGPEFKSQQREECL*SRRAVG Trigger: TCCAACAGCCCTTCTGCTTCATAGACATTCCTCTCT...TTGCTGGGATTTGAACTCAGGACCTTTGGAATAGCAGTCAGTGCTCTTAACCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR TCA 90 bp | TCTATGAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTGGAACACTGAACAAGTaGAAGCACCCCAGTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SMKQKGCWKDRLKMVSQTGTLNK*KHPSSP Trigger: AGGGGAACTGGGGTGCTTTCACTTGTTCAGTGTTCC...AGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTCATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTCCAGTCTGGTTCTCTGGCTACTaGTATGACCAAAGTAGTCGC | + |
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Preference number: 2 (lower is better) Translates to: KQKGCWKDRLKMVSQTPVWFSGY*YDQSSR Trigger: GCGACTACTTTGGTCATATCAGTAGCCAGAGAACCA...GACTGGAGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTAGTCGCCTTGCCCAGGATTCAAGACAATTCAGAGAATGTTTCTTTCCCATTTGATCTGAACACCTaGATGCTGGGAGCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: KVVALPRIQDNSENVSFPFDLNT*MLGAGT Trigger: TGTTCCTGCTCCCAGCATTCAGGTGTTCAGATCAAA...TGGGAAAGAAACATTCTCTGAATTGTCTTGAATCCTGGGCAAGGCGACTACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCATTACTGTCTGTTGTCTCCTCCAACTGATGGTACCTTTTCTCCTTCCATACAGAGGATTCCTCTaGTTAAGTTATCCTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SPITVCCLLQLMVPFLLPYRGFL*LSYPPR Trigger: TCTGGGAGGATAACTTAACCAGAGGAATCCTCTGTA...TGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR GCA 90 bp | CCCATTACTGTCTGTTGTCTCCTCCAACTGATGGTACCTTTTCTCCTTCCAAATTCCCTTATATCCCGATaGTTCTTAATAAATTCCACT | + |
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Preference number: 2 (lower is better) Translates to: PITVCCLLQLMVPFLLPNSLISR*FLINST Trigger: AGTGGAATTTATTAAGAAGCATCGGGATATAAGGGA...ATTTGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR CAA 90 bp | TGTATAATATGCTTTAATCATATTCACTTCTCCCATTACTGTCTGTaGTCTCCTCCAACTGATGGTACCTTTTCTCCTTCCAAATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: CIICFNHIHFSHYCL*SPPTDGTFSPSKWF Trigger: GAACCATTTGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGGAGAAGTGAATATGATTAAAGCATATTATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR CAA 90 bp | CTGACTGCTATTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATATGGTGACTGTGGATCCTGCTAGGTaGAAGTTTGATCTGAACACC | + |
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Preference number: 3 (lower is better) Translates to: LTAIPKVLSSNPSNHMVTVDPAR*KFDLNT Trigger: GGTGTTCAGATCAAACTTCAACCTAGCAGGATCCAC...AGTCACCATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAATAGCAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR CAA 90 bp | CCCATTACTGTCTGTTGTCTCCTCCAACTGATGGTACCTTTTCTCCTTCCAAATGAAGCAGAAGGGCTGTaGGAAGGATCGCTTAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: PITVCCLLQLMVPFLLPNEAEGL*EGSLKN Trigger: ATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTC...ATTTGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR-3UTR CAA 90 bp | CTGACTGCTATTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATATGGTGACTAAGATGAATGAAAACTaGCTAGGTGGACATGATGGC | + |
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Preference number: 3 (lower is better) Translates to: LTAIPKVLSSNPSNHMVTKMNEN*LGGHDG Trigger: GCCATCATGTCCACCTAGCAAGTTTTCATTCATCTT...AGTCACCATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAATAGCAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR CCA 72 bp | TCCCAGAGAGGAATGTCTATGAAGCAGAAGGGCTGTTaGAAGGATCGCTTAAAAATGGTTTCTCAAACTCCA | + |
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Preference number: 3 (lower is better) Translates to: SQRGMSMKQKGC*KDRLKMVSQTP Trigger: TGGAGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTCATAGACATTCCTCTCTGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR TCA 72 bp | TCACTTCTCCCATTACTGTCTGTTGTCTCCTCCAACTaGTGGTACCTTTTCTCCTTCCAAATGGTTCTATCT | + |
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Preference number: 3 (lower is better) Translates to: SLLPLLSVVSSN*WYLFSFQMVLS Trigger: AGATAGAACCATTTGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGGAGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR TCA 72 bp | GGAGACTCTGGAAATAAACTTAAAATAGGAGATAGATaGCCATACAGAGGATTCCTCTGGTTAAGTTATCCT | + |
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Preference number: 3 (lower is better) Translates to: GDSGNKLKIGDR*PYRGFLWLSYP Trigger: AGGATAACTTAACCAGAGGAATCCTCTGTATGGTCATCTATCTCCTATTTTAAGTTTATTTCCAGAGTCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR GCA 72 bp | ACAGCGAACTGTATTACTTATTATATGCAAGAGGACTaGCTTTATGGACAGAAGAAAACAAAACTCCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: TANCITYYMQED*LYGQKKTKLLV Trigger: TACCAGGAGTTTTGTTTTCTTCTGTCCATAAAGGCAGTCCTCTTGCATATAATAAGTAATACAGTTCGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR GCA 72 bp | AATTGGTGTCCACAGCGAACTGTATTACTTATTATATaGAAGAGGACTGCCTTTATGGACAGAAGAAAACAA | + |
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Preference number: 3 (lower is better) Translates to: NWCPQRTVLLII*KRTAFMDRRKQ Trigger: TTGTTTTCTTCTGTCCATAAAGGCAGTCCTCTTGCATATAATAAGTAATACAGTTCGCTGTGGACACCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR CCA 90 bp | CTGACTGCTATTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCATATGGTGACTCTGAAGGAGATGGCCTaGGGATGTGAGGAGGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LTAIPKVLSSNPSNHMVTLKEMA*GCEEVK Trigger: CTTGACCTCCTCACATCCCCAGGCCATCTCCTTCAG...AGTCACCATATGGTTGCTGGGATTTGAACTCAGGACCTTTGGAATAGCAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR CCA 90 bp | TCTCCCATTACTGTCTGTTGTCTCCTCCAACTGATGGTACCTTTTCTCCTTCCAATGAAGTTCCCACCATaGCTATGCAGGCCCGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SPITVCCLLQLMVPFLLPMKFPP*LCRPGG Trigger: ACCACCGGGCCTGCATAGCCATGGTGGGAACTTCAT...TGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR CCA 90 bp | GAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTCCAGTACCTTGCGGCGGCTCTaGCTAGAAGCAATTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EAEGLLEGSLKNGFSNSSTLRRL*LEAIAR Trigger: CCTGGCAATTGCTTCTAGCCAGAGCCGCCGCAAGGT...ACTGGAGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR TCA 90 bp | TCTATGAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTCAGAACAGTGGCCCCTaGAGGGCTCTGAGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SMKQKGCWKDRLKMVSQTQNSGP*RALRSE Trigger: CTCTGACCTCAGAGCCCTTCAGGGGCCACTGTTCTG...AGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTCATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR GCA 90 bp | TCTCCCATTACTGTCTGTTGTCTCCTCCAACTGATGGTACCTTTTCTCCTTCCAAAATACATGGGGGAGTaGAGCACAGGGCTGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SPITVCCLLQLMVPFLLPKYMGE*STGLVW Trigger: CCAAACCAGCCCTGTGCTGCACTCCCCCATGTATTT...TGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR CCA 90 bp | GAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTCCAGTAAGCAATTGCCAGGATaGCTCCCAGGATGCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: EAEGLLEGSLKNGFSNSSKQLPG*LPGCGH Trigger: ATGCCCGCATCCTGGGAGCCATCCTGGCAATTGCTT...ACTGGAGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR TCA 90 bp | CTGGGATATGGAATAAGAAGTAAGACACAGGCCATCCATGTCTCAATTCCGGCAGAGGAGACAGCACTCTaGGATACCCAGGACAATGAA | + |
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Preference number: 4 (lower is better) Translates to: LGYGIRSKTQAIHVSIPAEETAL*DTQDNE Trigger: TTCATTGTCCTGGGTATCTCAGAGTGCTGTCTCCTC...TGCCGGAATTGAGACATGGATGGCCTGTGTCTTACTTCTTATTCCATATCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR CCA 90 bp | GCGGTTAAGAGCACTGACTGCTATTCCAAAGGTCCTGAGTTCAAATCCCAGCAAAGCACAGGGCTGGTTTaGGTAAGAAAGATGATCAGT | + |
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Preference number: 4 (lower is better) Translates to: AVKSTDCYSKGPEFKSQQSTGLV*VRKMIS Trigger: ACTGATCATCTTTCTTACCCAAACCAGCCCTGTGCT...TTGCTGGGATTTGAACTCAGGACCTTTGGAATAGCAGTCAGTGCTCTTAACCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR CCA 90 bp | TCTCCCATTACTGTCTGTTGTCTCCTCCAACTGATGGTACCTTTTCTCCTTCCAATGAAGAAGTACATCTaGGCTGCACAGCTCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPITVCCLLQLMVPFLLPMKKYI*AAQLLK Trigger: CTTCAGGAGCTGTGCAGCCCAGATGTACTTCTTCAT...TGGAAGGAGAAAAGGTACCATCAGTTGGAGGAGACAACAGACAGTAATGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR TCA 90 bp | GAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTCCAGTAGATACCCAGGACAATaGAGAAGTACATCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EAEGLLEGSLKNGFSNSSRYPGQ*RSTSGL Trigger: CAGCCCAGATGTACTTCTTCATTGTCCTGGGTATCT...ACTGGAGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR CCA 90 bp | AAAGTAGTCGCCTTGCCCAGGATTCAAGACAATTCAGAGAATGTTTCTTTCCCATGGGCACAATGTCTGTaGTGTAGAGAAGCTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: KVVALPRIQDNSENVSFPWAQCL*CREAPP Trigger: TGGTGGAGCTTCTCTACACCACAGACATTGTGCCCA...TGGGAAAGAAACATTCTCTGAATTGTCTTGAATCCTGGGCAAGGCGACTACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR TCA 90 bp | TCTATGAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTGATGCCCATGATCCATaGAGTTCCCACCATGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SMKQKGCWKDRLKMVSQTDAHDP*SSHHGY Trigger: ATAGCCATGGTGGGAACTTCATGGATCATGGGCATC...AGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTCATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| 3UTR CAA 72 bp | GGTTCTCTGGCTACTGATATGACCAAAGTAGTCGCCTaGCCCAGGATTCAAGACAATTCAGAGAATGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GSLATDMTKVVA*PRIQDNSENVS Trigger: AGAAACATTCTCTGAATTGTCTTGAATCCTGGGCAAGGCGACTACTTTGGTCATATCAGTAGCCAGAGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR GCA 90 bp | TCTATGAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTGAAATTTCACTCCTGTaGTTCCCAGCACTTGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: SMKQKGCWKDRLKMVSQTEISLL*FPALAS Trigger: GCTAGCAAGTGCTGGGAAGCACAGGAGTGAAATTTC...AGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTCATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS GCA 90 bp | TGTGTAGAAGAGACTAAGGATGCGGTCTGTGGTGACAGAAGAGCCTaGTCTGGGTCTGATATATGTGATGCTGGCCGTTCCGAAGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: CVEETKDAVCGDRRA*SGSDICDAGRSEEE Trigger: CTCTTCTTCGGAACGGCCAGCATCACATATATCAGACCCAGAGCAGGCTCTTCTGTCACCACAGACCGCATCCTTAGTCTCTTCTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS TCA 90 bp | GGGGGAGTGCAGCACAGGGCTGGTTTGGGTAAGAAAGATGATCAGTaGGTTGCCCAGAAAGGTTATCAGGTAGACAAGAAGTACCAACCA | + |
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Preference number: 5 (lower is better) Translates to: GGVQHRAGLGKKDDQ*VAQKGYQVDKKYQP Trigger: TGGTTGGTACTTCTTGTCTACCTGATAACCTTTCTGGGCAACTCACTGATCATCTTTCTTACCCAAACCAGCCCTGTGCTGCACTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS-3UTR CAA 90 bp | GAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTCCAGTCAGGTAGAGAAGACCTaGCGGCGGCTCTGGCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: EAEGLLEGSLKNGFSNSSQVEKT*RRLWLE Trigger: TTCTAGCCAGAGCCGCCGCAAGGTCTTCTCTACCTG...ACTGGAGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTCCAGTCTGTGCTTCCCAGCACTaGCTAGCCTCAGTACTGGCA | + |
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Preference number: 5 (lower is better) Translates to: KQKGCWKDRLKMVSQTPVCASQH*LASVLA Trigger: TGCCAGTACTGAGGCTAGCAAGTGCTGGGAAGCACA...GACTGGAGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS GCA 90 bp | ATGATAAAGACCACTGTGGCAGTCATTACAGAAATTTCACTCCTGTaGTTCCCAGCACTTGCTAGCCTCAGTACTGGCAGGATGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: MIKTTVAVITEISLL*FPALASLSTGRMSQ Trigger: CTGTGACATCCTGCCAGTACTGAGGCTAGCAAGTGCTGGGAAGCACAGGAGTGAAATTTCTGTAATGACTGCCACAGTGGTCTTTATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS-3UTR CAA 90 bp | TCTATGAAGCAGAAGGGCTGTTGGAAGGATCGCTTAAAAATGGTTTCTCAAACTAAGATGATCAGTGAGTaGCCCAGAAAGGTTATCAGG | + |
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Preference number: 5 (lower is better) Translates to: SMKQKGCWKDRLKMVSQTKMISE*PRKVIR Trigger: CCTGATAACCTTTCTGGGCAACTCACTGATCATCTT...AGTTTGAGAAACCATTTTTAAGCGATCCTTCCAACAGCCCTTCTGCTTCATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214584.3 |
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| CDS GCA 72 bp | AGAGAAGACCTTGCGGCGGCTCTGGCTAGAAGCAATTaGCAGGATGGCTCCCAGGATGCGGGCATAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: REDLAAALARSN*QDGSQDAGIRS Trigger: ACTTCTTATGCCCGCATCCTGGGAGCCATCCTGGCAATTGCTTCTAGCCAGAGCCGCCGCAAGGTCTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS TCA 72 bp | GAAGTACCAACCAGAACAGTGGCCCCTGAAGGGCTCTaGGGTCAGAGAACCCCAGTAGGAGAAACTCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: EVPTRTVAPEGL*GQRTPVGETQL Trigger: CAACTGAGTTTCTCCTACTGGGGTTCTCTGACCTCAGAGCCCTTCAGGGGCCACTGTTCTGGTTGGTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS TCA 72 bp | AGAGTGAGTGGTAGCTGTGATGATGCCCATGATCCATaGAGTTCCCACCATGGCTATGCAGGCCCGGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RVSGSCDDAHDP*SSHHGYAGPVV Trigger: AACCACCGGGCCTGCATAGCCATGGTGGGAACTTCATGGATCATGGGCATCATCACAGCTACCACTCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS GCA 72 bp | GAGACTAAGGATGCGGTCTGTGGTGACAGAAGAGCCTaGTCTGGGTCTGATATATGTGATGCTGGCCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ETKDAVCGDRRA*SGSDICDAGRS Trigger: GGAACGGCCAGCATCACATATATCAGACCCAGAGCAGGCTCTTCTGTCACCACAGACCGCATCCTTAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS CCA 72 bp | GGTTATCAGGTAGACAAGAAGTACCAACCAGAACAGTaGCCCCTGAAGGGCTCTGAGGTCAGAGAACCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GYQVDKKYQPEQ*PLKGSEVREPQ Trigger: CTGGGGTTCTCTGACCTCAGAGCCCTTCAGGGGCCACTGTTCTGGTTGGTACTTCTTGTCTACCTGATAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS CAA 90 bp | CTGTGGCAGTCATTACAGAAATTTCACTCCTGTGCTTCCCAGCACTaGCTAGCCTCAGTACTGGCAGGATGTCACAGAGGAAGTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LWQSLQKFHSCASQH*LASVLAGCHRGSVG Trigger: TCCCACACTTCCTCTGTGACATCCTGCCAGTACTGAGGCTAGCAAGTGCTGGGAAGCACAGGAGTGAAATTTCTGTAATGACTGCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS GCA 72 bp | ACCACTGTGGCAGTCATTACAGAAATTTCACTCCTGTaGTTCCCAGCACTTGCTAGCCTCAGTACTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TTVAVITEISLL*FPALASLSTGR Trigger: CCTGCCAGTACTGAGGCTAGCAAGTGCTGGGAAGCACAGGAGTGAAATTTCTGTAATGACTGCCACAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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| CDS CAA 72 bp | TCATTACAGAAATTTCACTCCTGTGCTTCCCAGCACTaGCTAGCCTCAGTACTGGCAGGATGTCACAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLQKFHSCASQH*LASVLAGCHRG Trigger: TCCTCTGTGACATCCTGCCAGTACTGAGGCTAGCAAGTGCTGGGAAGCACAGGAGTGAAATTTCTGTAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037071.5 ENSMUST00000214584.3 |
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