Pregenerated sensors for OLFR789 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000111273Ensembl transcript IDs: ENSMUST00000213236.2, ENSMUST00000213992.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCAAATATAGCTGTCTCTTGTGAGACTATGCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: NFQTLTPLHTLARFC*KDPNIAVSCETMPG Trigger: CCCCGGCATAGTCTCACAAGAGACAGCTATATTTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR TCA 90 bp | TTGCATTTCAAGGCAACATCAGCACATATTCAGCAATTGCAAAACTaGTCAGGTCAGGATAGGGTCAAAGATAGGACACATGCTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LHFKATSAHIQQLQN*SGQDRVKDRTHAVC Trigger: ACACACAGCATGTGTCCTATCTTTGACCCTATCCTGACCTGATCAGTTTTGCAATTGCTGAATATGTGCTGATGTTGCCTTGAAATGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCATGGAGACTGAAAGGGGGTGTTGAAATCCATGGAGCTGGAGTCACAGATGATTTCACAGAATGCTaGATAGAATCAGATTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CPWRLKGGVEIHGAGVTDDFTEC*IESDFL Trigger: CAGGAAATCTGATTCTATTCAGCATTCTGTGAAATC...ATCTGTGACTCCAGCTCCATGGATTTCAACACCCCCTTTCAGTCTCCATGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTAGATGCGATTTCACAGAATGCTaGATAGAATCAGATTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: IAVSCETMPGPSKHRSRCDFTEC*IESDFL Trigger: CAGGAAATCTGATTCTATTCAGCATTCTGTGAAATC...GCATCTACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCTCCACAGCAATTGCAAAACTaGTCAGGTCAGGATAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: ALCHYLGVIILLSKQFSPQQLQN*SGQDRV Trigger: GACCCTATCCTGACCTGATCAGTTTTGCAATTGCTG...TGGAGAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTAGATGCGAAAGAGAGGCCCATTaGACTTGCAAACTTTATATA | + |
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Preference number: 2 (lower is better) Translates to: IAVSCETMPGPSKHRSRCEREAH*TCKLYI Trigger: TATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTC...GCATCTACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCTCCAATGGTTGTGGTCATCTaGTTTCACAGAATGCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: ALCHYLGVIILLSKQFSPMVVVI*FHRMLN Trigger: ATTCAGCATTCTGTGAAATCAGATGACCACAACCAT...TGGAGAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCTCCACTAGCAAGATTTTGCTaGAAGGACCCAAATATAGCT | + |
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Preference number: 2 (lower is better) Translates to: ALCHYLGVIILLSKQFSPLARFC*KDPNIA Trigger: AGCTATATTTGGGTCCTTTCAGCAAAATCTTGCTAG...TGGAGAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACTCCCAGGTCAATCAAGAAACACAAGCACAAAAGTCAAGATGACAGAGACCACATATTCAGCAATTaGAAAACTGATCAGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: MTPRSIKKHKHKSQDDRDHIFSN*KTDQVR Trigger: CCTGACCTGATCAGTTTTGCAATTGCTGAATATGTG...GTCTCTGTCATCTTGACTTTTGTGCTTGTGTTTCTTGATTGACCTGGGAGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACTCCCAGGTCAATCAAGAAACACAAGCACAAAAGTCAAGATGACAGAGACAATGGCAACAATACCTaGCCTATTCCTCTTAATGAG | + |
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Preference number: 2 (lower is better) Translates to: MTPRSIKKHKHKSQDDRDNGNNT*PIPLNE Trigger: CTCATTAAGAGGAATAGGCCAGGTATTGTTGCCATT...GTCTCTGTCATCTTGACTTTTGTGCTTGTGTTTCTTGATTGACCTGGGAGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATAGAATTGGAAGAATGTAGAGTAACCATGAGCCCTTTGTCACTATTTGGGAGACCAGTAGATAGATaGACATACATAGACATGAAC | + |
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Preference number: 2 (lower is better) Translates to: QIELEECRVTMSPLSLFGRPVDR*TYIDMN Trigger: GTTCATGTCTATGTATGTTCATCTATCTACTGGTCT...CCCAAATAGTGACAAAGGGCTCATGGTTACTCTACATTCTTCCAATTCTATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATACTGTCTAGCCTGCTAAATGTATATATCCAAAAGCTAATACCCATGCTAAGACCAGTAGATAGATaGACATACATAGACATGAAC | + |
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Preference number: 2 (lower is better) Translates to: LILSSLLNVYIQKLIPMLRPVDR*TYIDMN Trigger: GTTCATGTCTATGTATGTTCATCTATCTACTGGTCT...TAGCATGGGTATTAGCTTTTGGATATATACATTTAGCAGGCTAGACAGTATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR CCA 72 bp | TGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTaGACTTGCAAACTTTATATACCCCAGTACAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: WPSRPSLEREAH*TCKLYIPQYRG Trigger: TCCCCTGTACTGGGGTATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR TCA 72 bp | ACGGTTTACATTTGGATGCCTGGTGTCCATGGAGACTaGAAGGGGGTGTTGAAATCCATGGAGCTGGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: TVYIWMPGVHGD*KGVLKSMELES Trigger: TGACTCCAGCTCCATGGATTTCAACACCCCCTTTCAGTCTCCATGGACACCAGGCATCCAAATGTAAACCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR GCA 72 bp | AGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTaGAAACTTTATATACCCCAGTACAGGGGAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: SRPSLEREAHWT*KLYIPQYRGMP Trigger: TGGCATTCCCCTGTACTGGGGTATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR CCA 72 bp | GGAGCTCTTGTCTCTAGCTACATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GALVSSYICIKR*PSRPSLEREAH Trigger: ATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGTAGCTAGAGACAAGAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR CCA 72 bp | TTCTGTATGCATGTGCACGGTTTACATTTGGATGCCTaGTGTCCATGGAGACTGAAAGGGGGTGTTGAAATC | + |
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Preference number: 3 (lower is better) Translates to: FCMHVHGLHLDA*CPWRLKGGVEI Trigger: GATTTCAACACCCCCTTTCAGTCTCCATGGACACCAGGCATCCAAATGTAAACCGTGCACATGCATACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR GCA 72 bp | GCTGGAGTCACAGATGGCTGTGAGTCATTGTGTAGGTaGTGGGAGATAACCCTGATTCTTTTGAAGAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: AGVTDGCESLCR*WEITLILLKKS Trigger: ACTTTTCTTCAAAAGAATCAGGGTTATCTCCCAGCACCTACACAATGACTCACAGCCATCTGTGACTCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR CCA 72 bp | GGAGTCACAGATGGCTGTGAGTCATTGTGTAGGTGCTaGGAGATAACCCTGATTCTTTTGAAGAAAAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: GVTDGCESLCRC*EITLILLKKSQ Trigger: CTGACTTTTCTTCAAAAGAATCAGGGTTATCTCCCAGCACCTACACAATGACTCACAGCCATCTGTGACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTAGATGCCTGTTACCTATAAACTaGGAAAGAAGAACTTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: IAVSCETMPGPSKHRSRCLLPIN*ERRTCA Trigger: AGCACAAGTTCTTCTTTCCAAGTTTATAGGTAACAG...GCATCTACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR TCA 72 bp | ACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCAAATATAGCTGTCTCTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: TLTPLHTLARFC*KDPNIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATTTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR TCA 72 bp | AAGGCAACATCAGCACATATTCAGCAATTGCAAAACTaGTCAGGTCAGGATAGGGTCAAAGATAGGACACAT | + |
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Preference number: 3 (lower is better) Translates to: KATSAHIQQLQN*SGQDRVKDRTH Trigger: ATGTGTCCTATCTTTGACCCTATCCTGACCTGATCAGTTTTGCAATTGCTGAATATGTGCTGATGTTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCTCCACAAAACTACCAATGGTaGTGGTCATCTGATTTCACA | + |
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Preference number: 3 (lower is better) Translates to: ALCHYLGVIILLSKQFSPQNYQW*WSSDFT Trigger: TGTGAAATCAGATGACCACAACCATTGGTAGTTTTG...TGGAGAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCCAAAACTACCAATGGTaGTGGTCATCTGATTTCACA | + |
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Preference number: 3 (lower is better) Translates to: MSPLSLFGGHHTLIQTILQNYQW*WSSDFT Trigger: TGTGAAATCAGATGACCACAACCATTGGTAGTTTTG...GAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR CCA 72 bp | CACATGCTGTGTGTCTCTGTCAATGGCAACAATACCTaGCCTATTCCTCTTAATGAGAATTTTAGAAAATGT | + |
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Preference number: 3 (lower is better) Translates to: HMLCVSVNGNNT*PIPLNENFRKC Trigger: ACATTTTCTAAAATTCTCATTAAGAGGAATAGGCCAGGTATTGTTGCCATTGACAGAGACACACAGCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR CAA 90 bp | CTGATACTGTCTAGCCTGCTAAATGTATATATCCAAAAGCTAATACCCATGCTACTGTTACCTATAAACTaGGAAAGAAGAACTTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: LILSSLLNVYIQKLIPMLLLPIN*ERRTCA Trigger: AGCACAAGTTCTTCTTTCCAAGTTTATAGGTAACAG...TAGCATGGGTATTAGCTTTTGGATATATACATTTAGCAGGCTAGACAGTATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR-3UTR CAA 90 bp | GTCAATGGCAACAATACCTGGCCTATTCCTCTTAATGAGAATTTTAGAAAATGTTACACTAGCAAGATTTaGCTGAAAGGACCCAAATAT | + |
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Preference number: 3 (lower is better) Translates to: VNGNNTWPIPLNENFRKCYTSKI*LKGPKY Trigger: ATATTTGGGTCCTTTCAGCAAAATCTTGCTAGTGTA...ACATTTTCTAAAATTCTCATTAAGAGGAATAGGCCAGGTATTGTTGCCATTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR TCA 90 bp | GGGGTGTTGAAATCCATGGAGCTGGAGTCACAGATGGCTGTGAGTCATTGTGTAATGGGGGTTTGTAGATaGGGGTCTACCAAGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GVLKSMELESQMAVSHCVMGVCR*GSTKVR Trigger: CCTCACCTTGGTAGACCCTCATCTACAAACCCCCAT...TACACAATGACTCACAGCCATCTGTGACTCCAGCTCCATGGATTTCAACACCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR TCA 90 bp | GGGGTGTTGAAATCCATGGAGCTGGAGTCACAGATGGCTGTGAGTCATTGTGTAAGAAAGATCACAATCTaGAGCCCAGGGTCATCTGAC | + |
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Preference number: 4 (lower is better) Translates to: GVLKSMELESQMAVSHCVRKITI*SPGSSD Trigger: GTCAGATGACCCTGGGCTTCAGATTGTGATCTTTCT...TACACAATGACTCACAGCCATCTGTGACTCCAGCTCCATGGATTTCAACACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR CAA 72 bp | ATTTGGGGATTCTGTATGCATGTGCACGGTTTACATTaGGATGCCTGGTGTCCATGGAGACTGAAAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: IWGFCMHVHGLH*DAWCPWRLKGG Trigger: ACCCCCTTTCAGTCTCCATGGACACCAGGCATCCAAATGTAAACCGTGCACATGCATACAGAATCCCCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR TCA 90 bp | TGTCCATGGAGACTGAAAGGGGGTGTTGAAATCCATGGAGCTGGAGTCACAGATAGACTCTTCTGTTCATaGTGGTTGTGTAGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: CPWRLKGGVEIHGAGVTDRLFCS*WLCSAV Trigger: CACTGCACTACACAACCATCATGAACAGAAGAGTCT...ATCTGTGACTCCAGCTCCATGGATTTCAACACCCCCTTTCAGTCTCCATGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR TCA 90 bp | GCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCTCCAATGGGGGTTTGTAGATaGGGGTCTACCAAGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ALCHYLGVIILLSKQFSPMGVCR*GSTKVR Trigger: CCTCACCTTGGTAGACCCTCATCTACAAACCCCCAT...TGGAGAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR TCA 90 bp | ATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTAGATGCACTGAAGAAAGAGAATaGCAGGTGGGAAGATGTTTA | + |
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Preference number: 4 (lower is better) Translates to: IAVSCETMPGPSKHRSRCTEERE*QVGRCL Trigger: TAAACATCTTCCCACCTGTCATTCTCTTTCTTCAGT...GCATCTACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGTTGAAATCCATGGAGCTGGAGTCACAGATGGCTGTGAGTCATTGTGTACAGAGTGTAGATAAATaGATTCATCATAGGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GVLKSMELESQMAVSHCVQSVDK*IHHRSH Trigger: GTGGCTCCTATGATGAATCCATTTATCTACACTCTG...TACACAATGACTCACAGCCATCTGTGACTCCAGCTCCATGGATTTCAACACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR TCA 90 bp | CAAATAGAATTGGAAGAATGTAGAGTAACCATGAGCCCTTTGTCACTATTTGGGAGAAAGATCACAATCTaGAGCCCAGGGTCATCTGAC | + |
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Preference number: 4 (lower is better) Translates to: QIELEECRVTMSPLSLFGRKITI*SPGSSD Trigger: GTCAGATGACCCTGGGCTTCAGATTGTGATCTTTCT...CCCAAATAGTGACAAAGGGCTCATGGTTACTCTACATTCTTCCAATTCTATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR TCA 90 bp | ATGACTCCCAGGTCAATCAAGAAACACAAGCACAAAAGTCAAGATGACAGAGACACTGAAGAAAGAGAATaGCAGGTGGGAAGATGTTTA | + |
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Preference number: 4 (lower is better) Translates to: MTPRSIKKHKHKSQDDRDTEERE*QVGRCL Trigger: TAAACATCTTCCCACCTGTCATTCTCTTTCTTCAGT...GTCTCTGTCATCTTGACTTTTGTGCTTGTGTTTCTTGATTGACCTGGGAGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CCA 90 bp | CAAATAGAATTGGAAGAATGTAGAGTAACCATGAGCCCTTTGTCACTATTTGGGAAAAGCACTACTTTTTaGATGGCGTCCTTAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QIELEECRVTMSPLSLFGKSTTF*MASLKA Trigger: AGCCTTTAAGGACGCCATCCAAAAAGTAGTGCTTTT...CCCAAATAGTGACAAAGGGCTCATGGTTACTCTACATTCTTCCAATTCTATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR CAA 72 bp | ATAGAATTGGAAGAATGTAGAGTAACCATGAGCCCTTaGTCACTATTTGGGGGTCATCATACTCTTATCCAA | + |
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Preference number: 4 (lower is better) Translates to: IELEECRVTMSP*SLFGGHHTLIQ Trigger: TTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGCTCATGGTTACTCTACATTCTTCCAATTCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CCA 90 bp | CTGATACTGTCTAGCCTGCTAAATGTATATATCCAAAAGCTAATACCCATGCTACAGAGTGTAGATAAATaGATTCATCATAGGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LILSSLLNVYIQKLIPMLQSVDK*IHHRSH Trigger: GTGGCTCCTATGATGAATCCATTTATCTACACTCTG...TAGCATGGGTATTAGCTTTTGGATATATACATTTAGCAGGCTAGACAGTATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CCA 90 bp | GTCAATGGCAACAATACCTGGCCTATTCCTCTTAATGAGAATTTTAGAAAATGTAAAAGCACTACTTTTTaGATGGCGTCCTTAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VNGNNTWPIPLNENFRKCKSTTF*MASLKA Trigger: AGCCTTTAAGGACGCCATCCAAAAAGTAGTGCTTTT...ACATTTTCTAAAATTCTCATTAAGAGGAATAGGCCAGGTATTGTTGCCATTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| 3UTR CAA 72 bp | AAAAGTCAAGATGACAGAGACAAGATTTTTCATGTATaGCATTTCAAGGCAACATCAGCACATATTCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KSQDDRDKIFHV*HFKATSAHIQQ Trigger: TTGCTGAATATGTGCTGATGTTGCCTTGAAATGCAATACATGAAAAATCTTGTCTCTGTCATCTTGACTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CAA 90 bp | TGTCCATGGAGACTGAAAGGGGGTGTTGAAATCCATGGAGCTGGAGTCACAGATGGCGTCCTTAAAGGCTaGCTTCACTTGTTGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: CPWRLKGGVEIHGAGVTDGVLKG*LHLLIP Trigger: AGGAATCAACAAGTGAAGCAAGCCTTTAAGGACGCC...ATCTGTGACTCCAGCTCCATGGATTTCAACACCCCCTTTCAGTCTCCATGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CAA 90 bp | GCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCTCCAGGCGTCCTTAAAGGCTaGCTTCACTTGTTGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: ALCHYLGVIILLSKQFSPGVLKG*LHLLIP Trigger: AGGAATCAACAAGTGAAGCAAGCCTTTAAGGACGCC...TGGAGAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CAA 90 bp | ATGACTCCCAGGTCAATCAAGAAACACAAGCACAAAAGTCAAGATGACAGAGACGAAAAGCACTACTTTTaGGATGGCGTCCTTAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: MTPRSIKKHKHKSQDDRDEKHYF*DGVLKG Trigger: GCCTTTAAGGACGCCATCCAAAAAGTAGTGCTTTTC...GTCTCTGTCATCTTGACTTTTGTGCTTGTGTTTCTTGATTGACCTGGGAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CAA 90 bp | GCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCTCCAAGTGATGCTTTTTCTTaGGCAGAAGGGTTAGCATAC | + |
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Preference number: 5 (lower is better) Translates to: ALCHYLGVIILLSKQFSPSDAFS*AEGLAY Trigger: GTATGCTAACCCTTCTGCCAAAGAAAAAGCATCACT...TGGAGAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCCCTTTGTCACTATTTGGGGGTCATCATACTCTTATCCAAACAATTCTCGAAAAGCACTACTTTTaGGATGGCGTCCTTAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: MSPLSLFGGHHTLIQTILEKHYF*DGVLKG Trigger: GCCTTTAAGGACGCCATCCAAAAAGTAGTGCTTTTC...GAGAATTGTTTGGATAAGAGTATGATGACCCCCAAATAGTGACAAAGGGCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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| CDS TCA 72 bp | GCAGGAGGGGGAAGTAGTCACAGGCGAAGTGATCGATaGCATTGGAGCCGCAGTAATCTAACTGAAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: AGGGSSHRRSDR*HWSRSNLTEER Trigger: TCTTTCTTCAGTTAGATTACTGCGGCTCCAATGTCATCGATCACTTCGCCTGTGACTACTTCCCCCTCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213236.2 ENSMUST00000213992.2 |
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