Pregenerated sensors for OLFR786 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095696Ensembl transcript IDs: ENSMUST00000076508.3, ENSMUST00000204529.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATaGGGGGAGACCATGGAATTGGTATATAAAAGGTCCATTAAACAC | + |
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Preference number: 1 (lower is better) Translates to: MCVCVCVCVCVCVCV*GETMELVYKRSIKH Trigger: GTGTTTAATGGACCTTTTATATACCAATTCCATGGTCTCCCCCCATACACACACACACACACACACACACACACACACACACACACACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| CDS-3UTR TCA 90 bp | GGAAGGCTCTGGGAACAACACAAACTTCCAGAAATCACATCGCTAGTGTTTCCCCAGGAACTTTGTGTCTaGACAGGAAAGTTGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRLWEQHKLPEITSLVFPQELCV*TGKLKQ Trigger: CTGCTTCAACTTTCCTGTTCAGACACAAAGTTCCTG...GGGAAACACTAGCGATGTGATTTCTGGAAGTTTGTGTTGTTCCCAGAGCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| CDS-3UTR CCA 90 bp | GGAAGGCTCTGGGAACAACACAAACTTCCAGAAATCACATCGCTAGTGTTTCCCGTATGGCAACTCCCTTaGTCAATGATGCTCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: GRLWEQHKLPEITSLVFPVWQLP*SMMLYL Trigger: CAGATAGAGCATCATTGACCAAGGGAGTTGCCATAC...GGGAAACACTAGCGATGTGATTTCTGGAAGTTTGTGTTGTTCCCAGAGCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| CDS-3UTR TCA 90 bp | GGAAGGCTCTGGGAACAACACAAACTTCCAGAAATCACATCGCTAGTGTTTCCCTGCTCTATCTGCTGCTaGGGGTTTTATGTACATAAA | + |
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Preference number: 4 (lower is better) Translates to: GRLWEQHKLPEITSLVFPCSICC*GFYVHK Trigger: TTTATGTACATAAAACCCTCAGCAGCAGATAGAGCA...GGGAAACACTAGCGATGTGATTTCTGGAAGTTTGTGTTGTTCCCAGAGCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| 3UTR CAA 72 bp | CTGAAGTTTTTATCTATGAGCTCCGCTGTTAAGCTTTaGGAGCTAGATGCCATGAAGGAACATGGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LKFLSMSSAVKL*ELDAMKEHGRS Trigger: GCTTCTGCCATGTTCCTTCATGGCATCTAGCTCCAAAAGCTTAACAGCGGAGCTCATAGATAAAAACTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| CDS-3UTR GCA 90 bp | GGAAGGCTCTGGGAACAACACAAACTTCCAGAAATCACATCGCTAGTGTTTCCCAAACACCATCTTTCTTaGCATGTTCATAAACGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GRLWEQHKLPEITSLVFPKHHLS*HVHKRL Trigger: CAAGCGTTTATGAACATGGCAAGAAAGATGGTGTTT...GGGAAACACTAGCGATGTGATTTCTGGAAGTTTGTGTTGTTCCCAGAGCCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| CDS-3UTR TCA 90 bp | TATATATTAGGAAAATACATGAGTGTTCACGAAGTGTCTTTCCCATTTCTGGGGTCAGTGCAGGGAAGATaGTTAGGAAAGAAACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: YILGKYMSVHEVSFPFLGSVQGR*LGKKPA Trigger: GGCTGGTTTCTTTCCTAATCATCTTCCCTGCACTGA...CCCCAGAAATGGGAAAGACACTTCGTGAACACTCATGTATTTTCCTAATATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| CDS-3UTR CCA 90 bp | TATATATTAGGAAAATACATGAGTGTTCACGAAGTGTCTTTCCCATTTCTGGGGCCTTTGACCTCTGACTaGCAGAAGGAATCTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: YILGKYMSVHEVSFPFLGPLTSD*QKESSQ Trigger: TTGTGAAGATTCCTTCTGCCAGTCAGAGGTCAAAGG...CCCCAGAAATGGGAAAGACACTTCGTGAACACTCATGTATTTTCCTAATATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| CDS-3UTR CAA 90 bp | GGAAGGCTCTGGGAACAACACAAACTTCCAGAAATCACATCGCTAGTGTTTCCCTCTTCTCCAGGAACTTaGTGTCTGAACAGGAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GRLWEQHKLPEITSLVFPSSPGT*CLNRKV Trigger: AACTTTCCTGTTCAGACACAAAGTTCCTGGAGAAGA...GGGAAACACTAGCGATGTGATTTCTGGAAGTTTGTGTTGTTCCCAGAGCCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204529.3 |
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| CDS TCA 90 bp | ACACACAATAATCAAGCTGTAGAAGTAACATCAGTGCAGGGAAGATaGTTAGGAAAGAAACCAGCCAGGAGGCAAAGACCAACATTTTGC | + |
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Preference number: 5 (lower is better) Translates to: THNNQAVEVTSVQGR*LGKKPARRQRPTFC Trigger: GCAAAATGTTGGTCTTTGCCTCCTGGCTGGTTTCTTTCCTAATCATCTTCCCTGCACTGATGTTACTTCTACAGCTTGATTATTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076508.3 ENSMUST00000204529.3 |
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| CDS TCA 72 bp | AGCTATGCAGTTGTTGAAGGAAATTGTTTTATCCCCTaGGATAATGGTGCCCAAGAACCTTGGTATACAGAC | + |
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Preference number: 6 (lower is better) Translates to: SYAVVEGNCFIP*DNGAQEPWYTD Trigger: GTCTGTATACCAAGGTTCTTGGGCACCATTATCTCAGGGGATAAAACAATTTCCTTCAACAACTGCATAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076508.3 ENSMUST00000204529.3 |
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