RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR780 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049573

Ensembl transcript IDs: ENSMUST00000215503.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCTTTAATCCCACCATTCTGGAGGCAGAGGCAGGCAGATCTCTGTaGGTTCTAAGCCAACCAGGACTACATAGTGGAATCCTGATTCAA +
Preference number: 1 (lower is better)
Translates to: VFNPTILEAEAGRSL*VLSQPGLHSGILIQ
Trigger: TTGAATCAGGATTCCACTATGTAGTCCTGGTTGGCTTAGAACTCACAGAGATCTGCCTGCCTCTGCCTCCAGAATGGTGGGATTAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
3UTR TCA 90 bp ACTGAACCTGGGTCCTCAGGAAAAGCAATAAGTTCTCCTAATTATTaGGCCATTTCTGAATCCCTGCATATAAATATTCTTGACTCACAT +
Preference number: 1 (lower is better)
Translates to: TEPGSSGKAISSPNY*AISESLHINILDSH
Trigger: ATGTGAGTCAAGAATATTTATATGCAGGGATTCAGAAATGGCTCAATAATTAGGAGAACTTATTGCTTTTCCTGAGGACCCAGGTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
3UTR TCA 72 bp CCCACCATTCTGGAGGCAGAGGCAGGCAGATCTCTGTaGGTTCTAAGCCAACCAGGACTACATAGTGGAATC +
Preference number: 3 (lower is better)
Translates to: PTILEAEAGRSL*VLSQPGLHSGI
Trigger: GATTCCACTATGTAGTCCTGGTTGGCTTAGAACTCACAGAGATCTGCCTGCCTCTGCCTCCAGAATGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
3UTR GCA 72 bp TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTaGCTCTGTCTCTCAAGTGCTGGGATTAAAGGCATG +
Preference number: 3 (lower is better)
Translates to: CRPGWPRTQKST*LCLSSAGIKGM
Trigger: CATGCCTTTAATCCCAGCACTTGAGAGACAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
3UTR TCA 72 bp CTCACATTGCTCAATCTTTTAAGACTGCTAGTCAAGTaGTCTCATATTAGGCCACACCCTCAGCCCAATTCT +
Preference number: 3 (lower is better)
Translates to: LTLLNLLRLLVK*SHIRPHPQPNS
Trigger: AGAATTGGGCTGAGGGTGTGGCCTAATATGAGATCACTTGACTAGCAGTCTTAAAAGATTGAGCAATGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
3UTR TCA 72 bp ACAGATTTATTTATTGTGTGTGTGTGTGTGTGTGTTTaGGAGAGAGACAGAGACAGAGAGACAAAGACAGAG +
Preference number: 3 (lower is better)
Translates to: TDLFIVCVCVCV*ERDRDRETKTE
Trigger: CTCTGTCTTTGTCTCTCTGTCTCTGTCTCTCTCTCAAACACACACACACACACACACAATAAATAAATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
3UTR TCA 72 bp GGGTCCTCAGGAAAAGCAATAAGTTCTCCTAATTATTaGGCCATTTCTGAATCCCTGCATATAAATATTCTT +
Preference number: 3 (lower is better)
Translates to: GSSGKAISSPNY*AISESLHINIL
Trigger: AAGAATATTTATATGCAGGGATTCAGAAATGGCTCAATAATTAGGAGAACTTATTGCTTTTCCTGAGGACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
CDS-3UTR TCA 90 bp GCGCTATATGTCTTTAATCCCACCATTCTGGAGGCAGAGGCAGGCAGATCTCTGTCACAGAATTCCAGGTaGAACCCCAAACTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ALYVFNPTILEAEAGRSLSQNSR*NPKLRG
Trigger: ACCCCTGAGTTTGGGGTTTCACCTGGAATTCTGTGA...CAGAGATCTGCCTGCCTCTGCCTCCAGAATGGTGGGATTAAAGACATATAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
CDS-3UTR TCA 90 bp GCGCTATATGTCTTTAATCCCACCATTCTGGAGGCAGAGGCAGGCAGATCTCTGACACCTTGTTGTTCATaGTGGTCATATAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: ALYVFNPTILEAEAGRSLTPCCS*WSYNAK
Trigger: CTTTGCATTATATGACCATCATGAACAACAAGGTGT...CAGAGATCTGCCTGCCTCTGCCTCCAGAATGGTGGGATTAAAGACATATAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
CDS-3UTR TCA 90 bp AGGGCATCTGATCCCCTAAAACTTGAACCACAGATGTTTGAGAGCAGCCATGTGAGGATTCAGCATGGGTaGTATGGAAGAAATAAGCAC +
Preference number: 4 (lower is better)
Translates to: RASDPLKLEPQMFESSHVRIQHG*YGRNKH
Trigger: GTGCTTATTTCTTCCATATCACCCATGCTGAATCCT...CACATGGCTGCTCTCAAACATCTGTGGTTCAAGTTTTAGGGGATCAGATGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
CDS-3UTR GCA 90 bp AGGGCATCTGATCCCCTAAAACTTGAACCACAGATGTTTGAGAGCAGCCATGTGGAGGATAATCATGAATaGTGCCATCCAACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RASDPLKLEPQMFESSHVEDNHE*CHPTGD
Trigger: ATCTCCTGTTGGATGGCAGCATTCATGATTATCCTC...CACATGGCTGCTCTCAAACATCTGTGGTTCAAGTTTTAGGGGATCAGATGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2
3UTR CAA 72 bp TACAGATTTATTTATTGTGTGTGTGTGTGTGTGTGTTaGAGAGAGAGACAGAGACAGAGAGACAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: YRFIYCVCVCVC*RERQRQRDKDR
Trigger: TCTGTCTTTGTCTCTCTGTCTCTGTCTCTCTCTCAAACACACACACACACACACACAATAAATAAATCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215503.2