Pregenerated sensors for OLFR78 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043366Ensembl transcript IDs: ENSMUST00000060187.15, ENSMUST00000168007.3, ENSMUST00000217123.3
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTCAGGGGTCGGAGACAGGTGGTTGGCTGTGTACATAGACTTTTaGTTGCTGTGGCTTCAAAGTCCATCGTATTCCTCTACCTCATTG | + |
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Preference number: 1 (lower is better) Translates to: HSGVGDRWLAVYIDF*LLWLQSPSYSSTSL Trigger: CAATGAGGTAGAGGAATACGATGGACTTTGAAGCCACAGCAAGCAAAAGTCTATGTACACAGCCAACCACCTGTCTCCGACCCCTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CCA 90 bp | GAAGGCCAGAGTGCAACCTCCACAGAGTGTCCTGAGATGATATTGTaGGCCCTCAGGAGTTCTGTAAGGCTTGCTAGTGATATTAATAGA | + |
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Preference number: 1 (lower is better) Translates to: EGQSATSTECPEMIL*ALRSSVRLASDINR Trigger: TCTATTAATATCACTAGCAAGCCTTACAGAACTCCTGAGGGCCCACAATATCATCTCAGGACACTCTGTGGAGGTTGCACTCTGGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 90 bp | AAGTCCTGTTTTCAAATTCCAACCTTTCAGGCTAATATCACCAAGTaGCACTCAGGGGTCGGAGACAGGTGGTTGGCTGTGTACATAGAC | + |
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Preference number: 1 (lower is better) Translates to: KSCFQIPTFQANITK*HSGVGDRWLAVYID Trigger: GTCTATGTACACAGCCAACCACCTGTCTCCGACCCCTGAGTGTCACTTGGTGATATTAGCCTGAAAGGTTGGAATTTGAAAACAGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGATGTATGCTCATCTaGATGAGCAAGGCATGTCCACATTATGGAGGACAGTCTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVFRCMLI*MSKACPHYGGQSVL Trigger: AAGAACAGACTGTCCTCCATAATGTGGACATGCCTTGCTCATTCAGATGAGCATACATCTGAACACACACACACACACACACACACACAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CCA 90 bp | AGCTACTCTATCATGAAGAACAGTTTGGTACCCGCCACCAGAACATaGTTAATCACTTACCACAAACACAAGACATCCATGTTAGCACAC | + |
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Preference number: 1 (lower is better) Translates to: SYSIMKNSLVPATRT*LITYHKHKTSMLAH Trigger: GTGTGCTAACATGGATGTCTTGTGTTTGTGGTAAGTGATTAACCATGTTCTGGTGGCGGGTACCAAACTGTTCTTCATGATAGAGTAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| 3UTR TCA 90 bp | TCTGTGTCATTCATTTTGCTCTTTCTTGTTTTCTGGAATGACACCTaGCTCTACTGCTCTTCAGGCCGTGTTTCAGATTGTTCATTGCAT | + |
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Preference number: 1 (lower is better) Translates to: SVSFILLFLVFWNDT*LYCSSGRVSDCSLH Trigger: ATGCAATGAACAATCTGAAACACGGCCTGAAGAGCAGTAGAGTCAGGTGTCATTCCAGAAAACAAGAAAGAGCAAAATGAATGACACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 90 bp | TTTACTTTCTGTGTCATTCATTTTGCTCTTTCTTGTTTTCTGGAATaGCACCTGACTCTACTGCTCTTCAGGCCGTGTTTCAGATTGTTC | + |
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Preference number: 1 (lower is better) Translates to: FTFCVIHFALSCFLE*HLTLLLFRPCFRLF Trigger: GAACAATCTGAAACACGGCCTGAAGAGCAGTAGAGTCAGGTGTCATTCCAGAAAACAAGAAAGAGCAAAATGAATGACACAGAAAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 90 bp | ATGATCATTAACTCTGGAAAGAAGGAACCAGTGCAAAGAGTGAATTaGTTTGATGACTCAAACAGCAGCTGTTCTTATTGGGCCCAATTT | + |
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Preference number: 1 (lower is better) Translates to: MIINSGKKEPVQRVN*FDDSNSSCSYWAQF Trigger: AAATTGGGCCCAATAAGAACAGCTGCTGTTTGAGTCATCAAATCAATTCACTCTTTGCACTGGTTCCTTCTTTCCAGAGTTAATGATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 90 bp | GTGTTTACTGAGAGCACACTAAATACTGAATACTGTGTTAAGTGTTaGCCAAGGATTATCAGACCTACTTATCACAAAAGCACTACCAGG | + |
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Preference number: 1 (lower is better) Translates to: VFTESTLNTEYCVKC*PRIIRPTYHKSTTR Trigger: CCTGGTAGTGCTTTTGTGATAAGTAGGTCTGATAATCCTTGGTCAACACTTAACACAGTATTCAGTATTTAGTGTGCTCTCAGTAAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CCA 90 bp | AAGAACAAGAACACAGAAAGGTGGAAAAGCACTTATCACAGGATCTaGAACATGTTAAGCATACATGATACACATAAGCCTTCCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: KNKNTERWKSTYHRI*NMLSIHDTHKPSCS Trigger: TGAACAGGAAGGCTTATGTGTATCATGTATGCTTAACATGTTCCAGATCCTGTGATAAGTGCTTTTCCACCTTTCTGTGTTCTTGTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
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| 3UTR CCA 90 bp | CACGACAAAGAGAAAACAGGATTTGTAATAGGCAGAGGAAATAGATaGCAGATGTTAAGCAGGAAGCAATATAACATGGTAGTAAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: HDKEKTGFVIGRGNR*QMLSRKQYNMVVKQ Trigger: TTGCTTTACTACCATGTTATATTGCTTCCTGCTTAACATCTGCCATCTATTTCCTCTGCCTATTACAAATCCTGTTTTCTCTTTGTCGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| 3UTR CAA 90 bp | ACACTCAGGGGTCGGAGACAGGTGGTTGGCTGTGTACATAGACTTTaGCTTGCTGTGGCTTCAAAGTCCATCGTATTCCTCTACCTCATT | + |
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Preference number: 2 (lower is better) Translates to: TLRGRRQVVGCVHRL*LAVASKSIVFLYLI Trigger: AATGAGGTAGAGGAATACGATGGACTTTGAAGCCACAGCAAGCAAAAGTCTATGTACACAGCCAACCACCTGTCTCCGACCCCTGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTCTGTTCATCTGAGAGGAAGCAGCTACTCTATCATGAAGAACAGTTTGGGCAGAGGAAATAGATaGCAGATGTTAAGCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TSSVHLRGSSYSIMKNSLGRGNR*QMLSRK Trigger: CTTCCTGCTTAACATCTGCCATCTATTTCCTCTGCC...CAAACTGTTCTTCATGATAGAGTAGCTGCTTCCTCTCAGATGAACAGAGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTGGTAAACCCGCCACCAGAACATaGTTAATCACTTACCACAAA | + |
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Preference number: 2 (lower is better) Translates to: HLYSCTTHIQQALCSVGKPATRT*LITYHK Trigger: TTTGTGGTAAGTGATTAACCATGTTCTGGTGGCGGG...TTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGTGTAGGAGATTAGATTGTGAAATGCCATGTTTGGGCAAAGAGCAGGTACCTGAGATGATATTGTaGGCCCTCAGGAGTTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: TECRRLDCEMPCLGKEQVPEMIL*ALRSSV Trigger: TACAGAACTCCTGAGGGCCCACAATATCATCTCAGG...TACCTGCTCTTTGCCCAAACATGGCATTTCACAATCTAATCTCCTACACTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CAA 90 bp | AACAGCAGCTGTTCTTATTGGGCCCAATTTCCATTTACAGAGCCTTaGAATGTTTCCTGTGGTGGAAAATTCTCTCTCTGGGAGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: NSSCSYWAQFPFTEP*NVSCGGKFSLWEQF Trigger: AAACTGCTCCCAGAGAGAGAATTTTCCACCACAGGAAACATTCAAAGGCTCTGTAAATGGAAATTGGGCCCAATAAGAACAGCTGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTCCTGTTTTCAAATTCCAACCTTTCAGGCTAATATCACCAAGTGACACTGGCAGAGGAAATAGATaGCAGATGTTAAGCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TSPVFKFQPFRLISPSDTGRGNR*QMLSRK Trigger: CTTCCTGCTTAACATCTGCCATCTATTTCCTCTGCC...AGTGTCACTTGGTGATATTAGCCTGAAAGGTTGGAATTTGAAAACAGGACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAACAGTTTGGTACCCGCCACCAGAACATGGTTAATCACTTACCACAAACACATTTGGTATTATCAGTaGGTCTCATTTTACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KNSLVPATRTWLITYHKHIWYYQ*VSFYSR Trigger: TCTGCTGTAAAATGAGACCCACTGATAATACCAAAT...GTGTTTGTGGTAAGTGATTAACCATGTTCTGGTGGCGGGTACCAAACTGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTCTGTTCATCTGAGAGGAAGCAGCTACTCTATCATGAAGAACAGTTTGACTTATCACAGGATCTaGAACATGTTAAGCATACAT | + |
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Preference number: 2 (lower is better) Translates to: TSSVHLRGSSYSIMKNSLTYHRI*NMLSIH Trigger: ATGTATGCTTAACATGTTCCAGATCCTGTGATAAGT...CAAACTGTTCTTCATGATAGAGTAGCTGCTTCCTCTCAGATGAACAGAGGAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTCCTGTTTTCAAATTCCAACCTTTCAGGCTAATATCACCAAGTGACACTGACTTTTGCTTGCTGTaGCTTCAAAGTCCATCGTAT | + |
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Preference number: 2 (lower is better) Translates to: TSPVFKFQPFRLISPSDTDFCLL*LQSPSY Trigger: ATACGATGGACTTTGAAGCCACAGCAAGCAAAAGTC...AGTGTCACTTGGTGATATTAGCCTGAAAGGTTGGAATTTGAAAACAGGACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAAATTTGGTATTATCAGTaGGTCTCATTTTACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKIWYYQ*VSFYSR Trigger: TCTGCTGTAAAATGAGACCCACTGATAATACCAAAT...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | GCCAAGAAAATGCATAACTTACCTGGGGATGTCCAATaGTTGAAGCATCCTGCAGTCCTTCCCGAGACTGCG | + |
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Preference number: 3 (lower is better) Translates to: AKKMHNLPGDVQ*LKHPAVLPETA Trigger: CGCAGTCTCGGGAAGGACTGCAGGATGCTTCAATCATTGGACATCCCCAGGTAAGTTATGCATTTTCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CCA 72 bp | AGTGCAACCTCCACAGAGTGTCCTGAGATGATATTGTaGGCCCTCAGGAGTTCTGTAAGGCTTGCTAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: SATSTECPEMIL*ALRSSVRLASD Trigger: ATCACTAGCAAGCCTTACAGAACTCCTGAGGGCCCACAATATCATCTCAGGACACTCTGTGGAGGTTGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | AGAAAATGCATAACTTACCTGGGGATGTCCAATGATTaGAGCATCCTGCAGTCCTTCCCGAGACTGCGTAGC | + |
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Preference number: 3 (lower is better) Translates to: RKCITYLGMSND*SILQSFPRLRS Trigger: GCTACGCAGTCTCGGGAAGGACTGCAGGATGCTTCAATCATTGGACATCCCCAGGTAAGTTATGCATTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | TTTCAAATTCCAACCTTTCAGGCTAATATCACCAAGTaGCACTCAGGGGTCGGAGACAGGTGGTTGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: FQIPTFQANITK*HSGVGDRWLAV Trigger: CACAGCCAACCACCTGTCTCCGACCCCTGAGTGTCACTTGGTGATATTAGCCTGAAAGGTTGGAATTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR GCA 72 bp | GTCGGAGACAGGTGGTTGGCTGTGTACATAGACTTTTaGTTGCTGTGGCTTCAAAGTCCATCGTATTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: VGDRWLAVYIDF*LLWLQSPSYSS Trigger: AGAGGAATACGATGGACTTTGAAGCCACAGCAAGCAAAAGTCTATGTACACAGCCAACCACCTGTCTCCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR-3UTR CAA 90 bp | GCAACCTCCACAGAGTGTCCTGAGATGATATTGTGGGCCCTCAGGAGTTCTGTATCATTTTGCTCTTTCTaGTTTTCTGGAATGACACCT | + |
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Preference number: 3 (lower is better) Translates to: ATSTECPEMILWALRSSVSFCSF*FSGMTP Trigger: AGGTGTCATTCCAGAAAACAAGAAAGAGCAAAATGA...TACAGAACTCCTGAGGGCCCACAATATCATCTCAGGACACTCTGTGGAGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTTCAGATGTATGCTCATCTGAATaGGCAAGGCATGTCCACATTATGGAGGACAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: CVCVCSDVCSSE*ARHVHIMEDSL Trigger: CAGACTGTCCTCCATAATGTGGACATGCCTTGCTCATTCAGATGAGCATACATCTGAACACACACACACACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CCA 72 bp | ATCCAGCAGGCCCTTTGCAGTGTTGGTAAAGAGGACTaGAGGATCACTCATATCTCCCAATGTTACTTTATG | + |
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Preference number: 3 (lower is better) Translates to: IQQALCSVGKED*RITHISQCYFM Trigger: CATAAAGTAACATTGGGAGATATGAGTGATCCTCCAGTCCTCTTTACCAACACTGCAAAGGGCCTGCTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| 3UTR CCA 72 bp | AGGTGGTTGGCTGTGTACATAGACTTTTGCTTGCTGTaGCTTCAAAGTCCATCGTATTCCTCTACCTCATTG | + |
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Preference number: 3 (lower is better) Translates to: RWLAVYIDFCLL*LQSPSYSSTSL Trigger: CAATGAGGTAGAGGAATACGATGGACTTTGAAGCCACAGCAAGCAAAAGTCTATGTACACAGCCAACCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR-3UTR CAA 90 bp | TTAGATTGTGAAATGCCATGTTTGGGCAAAGAGCAGGTACAGGCACAGAGAAGGTCCAAGTTGTTTCATTaGGTATTATCAGTGGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: LDCEMPCLGKEQVQAQRRSKLFH*VLSVGL Trigger: GAGACCCACTGATAATACCAAATGAAACAACTTGGA...CCTTCTCTGTGCCTGTACCTGCTCTTTGCCCAAACATGGCATTTCACAATCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | GTTCTTATTGGGCCCAATTTCCATTTACAGAGCCTTTaGATGTTTCCTGTGGTGGAAAATTCTCTCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: VLIGPNFHLQSL*MFPVVENSLSG Trigger: CCCAGAGAGAGAATTTTCCACCACAGGAAACATTCAAAGGCTCTGTAAATGGAAATTGGGCCCAATAAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | TTCATTTTGCTCTTTCTTGTTTTCTGGAATGACACCTaGCTCTACTGCTCTTCAGGCCGTGTTTCAGATTGT | + |
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Preference number: 3 (lower is better) Translates to: FILLFLVFWNDT*LYCSSGRVSDC Trigger: ACAATCTGAAACACGGCCTGAAGAGCAGTAGAGTCAGGTGTCATTCCAGAAAACAAGAAAGAGCAAAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR-3UTR CAA 90 bp | ACAAGTCCTGTTTTCAAATTCCAACCTTTCAGGCTAATATCACCAAGTGACACTCCATTTACAGAGCCTTaGAATGTTTCCTGTGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: TSPVFKFQPFRLISPSDTPFTEP*NVSCGG Trigger: TCCACCACAGGAAACATTCAAAGGCTCTGTAAATGG...AGTGTCACTTGGTGATATTAGCCTGAAAGGTTGGAATTTGAAAACAGGACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | AACTCTGGAAAGAAGGAACCAGTGCAAAGAGTGAATTaGTTTGATGACTCAAACAGCAGCTGTTCTTATTGG | + |
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Preference number: 3 (lower is better) Translates to: NSGKKEPVQRVN*FDDSNSSCSYW Trigger: CCAATAAGAACAGCTGCTGTTTGAGTCATCAAATCAATTCACTCTTTGCACTGGTTCCTTCTTTCCAGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CCA 72 bp | GGAGTCCATGCAGCTAAAGATCAGTATGGTAACACATaGGCTGAAGAAACTGGTTTTACAAAATTTGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: GVHAAKDQYGNT*AEETGFTKFEL Trigger: TAGCTCAAATTTTGTAAAACCAGTTTCTTCAGCCCATGTGTTACCATACTGATCTTTAGCTGCATGGACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR-3UTR CAA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAATCCAAGTTGTTTCATTaGGTATTATCAGTGGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKSKLFH*VLSVGL Trigger: GAGACCCACTGATAATACCAAATGAAACAACTTGGA...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | TTTTACTCAATCACAATCCTTCACCAAAAGACCATATaGACTAGGGAAGATTACCCATCTAGTGTCAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: FYSITILHQKTI*TREDYPSSVSL Trigger: TAAGCTGACACTAGATGGGTAATCTTCCCTAGTTCATATGGTCTTTTGGTGAAGGATTGTGATTGAGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | GAGAGCACACTAAATACTGAATACTGTGTTAAGTGTTaGCCAAGGATTATCAGACCTACTTATCACAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: ESTLNTEYCVKC*PRIIRPTYHKS Trigger: GCTTTTGTGATAAGTAGGTCTGATAATCCTTGGTCAACACTTAACACAGTATTCAGTATTTAGTGTGCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CCA 72 bp | GAGAAAACAGGATTTGTAATAGGCAGAGGAAATAGATaGCAGATGTTAAGCAGGAAGCAATATAACATGGTA | + |
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Preference number: 3 (lower is better) Translates to: EKTGFVIGRGNR*QMLSRKQYNMV Trigger: TACCATGTTATATTGCTTCCTGCTTAACATCTGCCATCTATTTCCTCTGCCTATTACAAATCCTGTTTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| 3UTR TCA 72 bp | AATGAATCAACATTTTTGCCTGCTCCCTTTGTAATGTaGCAAGTGTTTACTGAGAGCACACTAAATACTGAA | + |
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Preference number: 3 (lower is better) Translates to: NESTFLPAPFVM*QVFTESTLNTE Trigger: TTCAGTATTTAGTGTGCTCTCAGTAAACACTTGTCACATTACAAAGGGAGCAGGCAAAAATGTTGATTCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
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| 3UTR CAA 72 bp | GTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTaGGTAAAGAGGACTGGAGGATCACTCATATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VVQPISSRPFAV*VKRTGGSLISP Trigger: GGGAGATATGAGTGATCCTCCAGTCCTCTTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCTGTTCATCTGAGAGGAAGCAGCTACTCTATCATGAAGAACAGTTTGAGCAGGAAGGTGGCATaGGTGAAGTTGCAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: TSSVHLRGSSYSIMKNSLSRKVA*VKLQEL Trigger: GAGTTCCTGCAACTTCACCCATGCCACCTTCCTGCT...CAAACTGTTCTTCATGATAGAGTAGCTGCTTCCTCTCAGATGAACAGAGGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| CDS-3UTR CCA 90 bp | CATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTGGTAAAAGCAGGAAGGTGGCATaGGTGAAGTTGCAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: HLYSCTTHIQQALCSVGKSRKVA*VKLQEL Trigger: GAGTTCCTGCAACTTCACCCATGCCACCTTCCTGCT...TTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| CDS-3UTR CCA 90 bp | CCACAAACACAAGACATCCATGTTAGCACACGACAAAGAGAAAACAGGATTTGTAGCAGCGTGACGCAGTaGGTGGCAGATAGCCACGTA | + |
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Preference number: 4 (lower is better) Translates to: PQTQDIHVSTRQRENRICSSVTQ*VADSHV Trigger: TACGTGGCTATCTGCCACCCACTGCGTCACGCTGCT...ACAAATCCTGTTTTCTCTTTGTCGTGTGCTAACATGGATGTCTTGTGTTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| CDS-3UTR TCA 90 bp | CATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTGGTAAACTGTTACTGTATTGTTaGGGACAGCAGCGTGACGCA | + |
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Preference number: 4 (lower is better) Translates to: HLYSCTTHIQQALCSVGKLLLYC*GQQRDA Trigger: TGCGTCACGCTGCTGTCCTCAACAATACAGTAACAG...TTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
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| CDS-3UTR CCA 90 bp | CATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTGGTAAAAGAGGGCGAGAATCTTaGGCATTGTGGATGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HLYSCTTHIQQALCSVGKRGRES*ALWMWT Trigger: TGTCCACATCCACAATGCCCAAGATTCTCGCCCTCT...TTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | ACAGAGTGTAGGAGATTAGATTGTGAAATGCCATGTTTGGGCAAAGAGCAGGTAGCAGAACCGTTCGTATaGTCAGGAAGTAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TECRRLDCEMPCLGKEQVAEPFV*SGSRTR Trigger: CCTTGTCCTACTTCCTGATCATACGAACGGTTCTGC...TACCTGCTCTTTGCCCAAACATGGCATTTCACAATCTAATCTCCTACACTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAGTGTAGGAGATTAGATTGTGAAATGCCATGTTTGGGCAAAGAGCAGGTAAAAAAGGTACATGGGTaGATGCAGGCTCCGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TECRRLDCEMPCLGKEQVKKVHG*MQAPLC Trigger: ACAGAGCGGAGCCTGCATGCACCCATGTACCTTTTT...TACCTGCTCTTTGCCCAAACATGGCATTTCACAATCTAATCTCCTACACTCTGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | AAGAACAGTTTGGTACCCGCCACCAGAACATGGTTAATCACTTACCACAAACACGACTTGGAAGGCAGTTaGAGAACCGTTCGTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: KNSLVPATRTWLITYHKHDLEGS*RTVRMI Trigger: GATCATACGAACGGTTCTGCAACTGCCTTCCAAGTC...GTGTTTGTGGTAAGTGATTAACCATGTTCTGGTGGCGGGTACCAAACTGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | ACCTCCTCTGTTCATCTGAGAGGAAGCAGCTACTCTATCATGAAGAACAGTTTGATGCTACAGCATACATaGAAAGCAGGGGGAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSSVHLRGSSYSIMKNSLMLQHT*KAGGSQ Trigger: TTGGCTTCCCCCTGCTTTCCATGTATGCTGTAGCAT...CAAACTGTTCTTCATGATAGAGTAGCTGCTTCCTCTCAGATGAACAGAGGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTAGCAGCGTGACGCAGTaGGTGGCAGATAGCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: HSTYKKVSLLIKASITCCSSVTQ*VADSHV Trigger: TACGTGGCTATCTGCCACCCACTGCGTCACGCTGCT...ACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATTTAAACCTCCTCTGTTCATCTGAGAGGAAGCAGCTACTCTATCATGAAAGCAGCGTGACGCAGTaGGTGGCAGATAGCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: KNLNLLCSSERKQLLYHESSVTQ*VADSHV Trigger: TACGTGGCTATCTGCCACCCACTGCGTCACGCTGCT...TTCATGATAGAGTAGCTGCTTCCTCTCAGATGAACAGAGGAGGTTTAAATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | ACAGAGTGTAGGAGATTAGATTGTGAAATGCCATGTTTGGGCAAAGAGCAGGTAAGTGGGAGAGCACATTaGAGTGACAGAAAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TECRRLDCEMPCLGKEQVSGRAH*SDRKPV Trigger: GACTGGCTTTCTGTCACTCCAATGTGCTCTCCCACT...TACCTGCTCTTTGCCCAAACATGGCATTTCACAATCTAATCTCCTACACTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| 3UTR CAA 72 bp | CTGAGAGGAAGCAGCTACTCTATCATGAAGAACAGTTaGGTACCCGCCACCAGAACATGGTTAATCACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LRGSSYSIMKNS*VPATRTWLITY Trigger: GTAAGTGATTAACCATGTTCTGGTGGCGGGTACCAAACTGTTCTTCATGATAGAGTAGCTGCTTCCTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGAGGTACATGGGTGCATaGAGGCTCCGCTCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAHTRKFLCSLKPLSHVVRYMGA*RLRSVL Trigger: GAGAACAGAGCGGAGCCTGCATGCACCCATGTACCT...CACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | ACATGTTGTGGTGGGCAAAAGTGGTATCTTCCCTGGGAAAAGAACAAGAACACAAGCCAGATCAATAGCTaGCAGCATGCAGAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCCGGQKWYLPWEKNKNTSQINS*QHAEKK Trigger: CTTTTTCTCTGCATGCTGGCAGCTATTGATCTGGCT...TGTGTTCTTGTTCTTTTCCCAGGGAAGATACCACTTTTGCCCACCACAACATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | CCACAAACACAAGACATCCATGTTAGCACACGACAAAGAGAAAACAGGATTTGTTCCCCCATTAGAACATaGACAATGGGATCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQTQDIHVSTRQRENRICSPIRT*TMGSRL Trigger: CAGCCTGGATCCCATTGTGCATGTTCTAATGGGGGA...ACAAATCCTGTTTTCTCTTTGTCGTGTGCTAACATGGATGTCTTGTGTTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAAAGCAGGAAGGTGGCATaGGTGAAGTTGCAGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKSRKVA*VKLQEL Trigger: GAGTTCCTGCAACTTCACCCATGCCACCTTCCTGCT...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTGGTAAAGAATCTTGGGCATTGTaGATGTGGACAAAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLYSCTTHIQQALCSVGKESWAL*MWTKPD Trigger: ATCTGGCTTTGTCCACATCCACAATGCCCAAGATTC...TTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAAAGATCAGTATGGTAACACATGGGCTGAAGAAACTGGTTTTACAAAAAAGCCAAACCAAAAGTaGGCTTCCTCCAGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AAKDQYGNTWAEETGFTKKPNQK*ASSSPG Trigger: TCCAGGACTGGAGGAAGCTCACTTTTGGTTTGGCTT...TTTTGTAAAACCAGTTTCTTCAGCCCATGTGTTACCATACTGATCTTTAGCTGC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAACTGTTACTGTATTGTTaGGGACAGCAGCGTGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKLLLYC*GQQRDA Trigger: TGCGTCACGCTGCTGTCCTCAACAATACAGTAACAG...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAAGCAGAACCGTTCGTATaGTCAGGAAGTAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKAEPFV*SGSRTR Trigger: CCTTGTCCTACTTCCTGATCATACGAACGGTTCTGC...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTTTAGGTACATGGGTGCATaGAGGCTCCGCTCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSCFIWYYQWVSFYSRIFRYMGA*RLRSVL Trigger: GAGAACAGAGCGGAGCCTGCATGCACCCATGTACCT...AAAGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | ACAAGTCCTGTTTTCAAATTCCAACCTTTCAGGCTAATATCACCAAGTGACACTGGACCAGAGCCACCATaGCTATTTGGACTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSPVFKFQPFRLISPSDTGPEPP*LFGLLL Trigger: CAGTAACAGTCCAAATAGGCATGGTGGCTCTGGTCC...AGTGTCACTTGGTGATATTAGCCTGAAAGGTTGGAATTTGAAAACAGGACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAAAGAGGGCGAGAATCTTaGGCATTGTGGATGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKRGRES*ALWMWT Trigger: TGTCCACATCCACAATGCCCAAGATTCTCGCCCTCT...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | ACATGTTGTGGTGGGCAAAAGTGGTATCTTCCCTGGGAAAAGAACAAGAACACATTAGAACATGCACAATaGGATCCAGGCTGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TCCGGQKWYLPWEKNKNTLEHAQ*DPGCFQ Trigger: TTGGAAACAGCCTGGATCCCATTGTGCATGTTCTAA...TGTGTTCTTGTTCTTTTCCCAGGGAAGATACCACTTTTGCCCACCACAACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | CGAGGAAACATACTGTCAGCTTCATGCTCCACATTTCAGAAGTTAAACATTATAAAGCCAAACCAAAAGTaGGCTTCCTCCAGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGNILSASCSTFQKLNIIKPNQK*ASSSPG Trigger: TCCAGGACTGGAGGAAGCTCACTTTTGGTTTGGCTT...TATAATGTTTAACTTCTGAAATGTGGAGCATGAAGCTGACAGTATGTTTCCTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | CACAGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTAAGCCAAACCAAAAGTaGGCTTCCTCCAGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSTYKKVSLLIKASITCCKPNQK*ASSSPG Trigger: TCCAGGACTGGAGGAAGCTCACTTTTGGTTTGGCTT...ACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | TGGCAGATGTTAAGCAGGAAGCAATATAACATGGTAGTAAAGCAAATGCATTCACTGTTACTGTATTGTTaGGGACAGCAGCGTGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQMLSRKQYNMVVKQMHSLLLYC*GQQRDA Trigger: TGCGTCACGCTGCTGTCCTCAACAATACAGTAACAG...TGAATGCATTTGCTTTACTACCATGTTATATTGCTTCCTGCTTAACATCTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | TGGCAGATGTTAAGCAGGAAGCAATATAACATGGTAGTAAAGCAAATGCATTCAGCAGAACCGTTCGTATaGTCAGGAAGTAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WQMLSRKQYNMVVKQMHSAEPFV*SGSRTR Trigger: CCTTGTCCTACTTCCTGATCATACGAACGGTTCTGC...TGAATGCATTTGCTTTACTACCATGTTATATTGCTTCCTGCTTAACATCTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | TGGCAGATGTTAAGCAGGAAGCAATATAACATGGTAGTAAAGCAAATGCATTCAAAAAAGGTACATGGGTaGATGCAGGCTCCGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WQMLSRKQYNMVVKQMHSKKVHG*MQAPLC Trigger: ACAGAGCGGAGCCTGCATGCACCCATGTACCTTTTT...TGAATGCATTTGCTTTACTACCATGTTATATTGCTTCCTGCTTAACATCTGCCA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | AGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGACCAGAGCCACCATaGCTATTTGGACTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: STYKKVSLLIKASITCCGGPEPP*LFGLLL Trigger: CAGTAACAGTCCAAATAGGCATGGTGGCTCTGGTCC...ACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | CACAGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGACCAGAGCCACCATaGCTATTTGGACTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: HSTYKKVSLLIKASITCCGPEPP*LFGLLL Trigger: CAGTAACAGTCCAAATAGGCATGGTGGCTCTGGTCC...ACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAAGACTTGGAAGGCAGTTaGAGAACCGTTCGTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKDLEGS*RTVRMI Trigger: GATCATACGAACGGTTCTGCAACTGCCTTCCAAGTC...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | GCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGCTGTTTCCAAAACGGTaGACCACTGACAGACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AHTRKFLCSLKPLSHVVVLFPKR*TTDRPM Trigger: CATTGGTCTGTCAGTGGTGCACCGTTTTGGAAACAG...CACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | ACAAGTCCTGTTTTCAAATTCCAACCTTTCAGGCTAATATCACCAAGTGACACTCTGTTTCCAAAACGGTaGACCACTGACAGACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TSPVFKFQPFRLISPSDTLFPKR*TTDRPM Trigger: CATTGGTCTGTCAGTGGTGCACCGTTTTGGAAACAG...AGTGTCACTTGGTGATATTAGCCTGAAAGGTTGGAATTTGAAAACAGGACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | TGGCAGATGTTAAGCAGGAAGCAATATAACATGGTAGTAAAGCAAATGCATTCATCCCCCATTAGAACATaGACAATGGGATCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQMLSRKQYNMVVKQMHSSPIRT*TMGSRL Trigger: CAGCCTGGATCCCATTGTGCATGTTCTAATGGGGGA...TGAATGCATTTGCTTTACTACCATGTTATATTGCTTCCTGCTTAACATCTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTGGTAAAGACCATAGACTACATTaGGTAATGTGTCTGTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLYSCTTHIQQALCSVGKDHRLH*VMCLYR Trigger: CCTATACAGACACATTACCCAATGTAGTCTATGGTC...TTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| 3UTR CAA 72 bp | TGTTCTTATTGGGCCCAATTTCCATTTACAGAGCCTTaGAATGTTTCCTGTGGTGGAAAATTCTCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSYWAQFPFTEP*NVSCGGKFSLW Trigger: CCAGAGAGAGAATTTTCCACCACAGGAAACATTCAAAGGCTCTGTAAATGGAAATTGGGCCCAATAAGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | TGGCAGATGTTAAGCAGGAAGCAATATAACATGGTAGTAAAGCAAATGCATTCAGACCACACTAATGTGTaGCACACAAGTCCCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: WQMLSRKQYNMVVKQMHSDHTNV*HTSPKC Trigger: GCATTTGGGACTTGTGTGTCACACATTAGTGTGGTC...TGAATGCATTTGCTTTACTACCATGTTATATTGCTTCCTGCTTAACATCTGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | AGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGACCACACTAATGTGTaGCACACAAGTCCCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: STYKKVSLLIKASITCCGDHTNV*HTSPKC Trigger: GCATTTGGGACTTGTGTGTCACACATTAGTGTGGTC...ACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTTTAAAAAGGTACATGGGTaGATGCAGGCTCCGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSCFIWYYQWVSFYSRIFKKVHG*MQAPLC Trigger: ACAGAGCGGAGCCTGCATGCACCCATGTACCTTTTT...AAAGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | CGAGGAAACATACTGTCAGCTTCATGCTCCACATTTCAGAAGTTAAACATTATACTGTTTCCAAAACGGTaGACCACTGACAGACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RGNILSASCSTFQKLNIILFPKR*TTDRPM Trigger: CATTGGTCTGTCAGTGGTGCACCGTTTTGGAAACAG...TATAATGTTTAACTTCTGAAATGTGGAGCATGAAGCTGACAGTATGTTTCCTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | ATCCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTTCCCCCATTAGAACATaGACAATGGGATCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQVVSFGIISGSHFTAESSPIRT*TMGSRL Trigger: CAGCCTGGATCCCATTGTGCATGTTCTAATGGGGGA...AGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CGAGGAAACATACTGTCAGCTTCATGCTCCACATTTCAGAAGTTAAACATTATAATGCTACAGCATACATaGAAAGCAGGGGGAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGNILSASCSTFQKLNIIMLQHT*KAGGSQ Trigger: TTGGCTTCCCCCTGCTTTCCATGTATGCTGTAGCAT...TATAATGTTTAACTTCTGAAATGTGGAGCATGAAGCTGACAGTATGTTTCCTCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTTTAGAGGGCGAGAATCTTaGGCATTGTGGATGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSCFIWYYQWVSFYSRIFRGRES*ALWMWT Trigger: TGTCCACATCCACAATGCCCAAGATTCTCGCCCTCT...AAAGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTAGTGGGAGAGCACATTaGAGTGACAGAAAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQVVSFGIISGSHFTAESSGRAH*SDRKPV Trigger: GACTGGCTTTCTGTCACTCCAATGTGCTCTCCCACT...AGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTTTAGTGGGAGAGCACATTaGAGTGACAGAAAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSCFIWYYQWVSFYSRIFSGRAH*SDRKPV Trigger: GACTGGCTTTCTGTCACTCCAATGTGCTCTCCCACT...AAAGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CCACAAACACAAGACATCCATGTTAGCACACGACAAAGAGAAAACAGGATTTGTTTAGAACATGCACAATaGGATCCAGGCTGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQTQDIHVSTRQRENRICLEHAQ*DPGCFQ Trigger: TTGGAAACAGCCTGGATCCCATTGTGCATGTTCTAA...ACAAATCCTGTTTTCTCTTTGTCGTGTGCTAACATGGATGTCTTGTGTTTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | CCACAAACACAAGACATCCATGTTAGCACACGACAAAGAGAAAACAGGATTTGTATTGCTGAGAGAGTATaGATGAAAAACATCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQTQDIHVSTRQRENRICIAERV*MKNIWA Trigger: TGCCCAGATGTTTTTCATTCATACTCTCTCAGCAAT...ACAAATCCTGTTTTCTCTTTGTCGTGTGCTAACATGGATGTCTTGTGTTTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | ATCCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTGACCACACTAATGTGTaGCACACAAGTCCCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: IQVVSFGIISGSHFTAESDHTNV*HTSPKC Trigger: GCATTTGGGACTTGTGTGTCACACATTAGTGTGGTC...AGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | AGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTAGCCAGATCAATAGCTaGCAGCATGCAGAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: STYKKVSLLIKASITCCGSQINS*QHAEKK Trigger: CTTTTTCTCTGCATGCTGGCAGCTATTGATCTGGCT...ACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | CGAGGAAACATACTGTCAGCTTCATGCTCCACATTTCAGAAGTTAAACATTATAAGCCAGATCAATAGCTaGCAGCATGCAGAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGNILSASCSTFQKLNIISQINS*QHAEKK Trigger: CTTTTTCTCTGCATGCTGGCAGCTATTGATCTGGCT...TATAATGTTTAACTTCTGAAATGTGGAGCATGAAGCTGACAGTATGTTTCCTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | GCTCATATATGTTCCTGGGTACTGAATAATAAAATTGAAATGAGCGAGGAAACAGACTTGGAAGGCAGTTaGAGAACCGTTCGTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: AHICSWVLNNKIEMSEETDLEGS*RTVRMI Trigger: GATCATACGAACGGTTCTGCAACTGCCTTCCAAGTC...TGTTTCCTCGCTCATTTCAATTTTATTATTCAGTACCCAGGAACATATATGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | GCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGCCACCATGCCTATTTaGACTGTTACTGTATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHTRKFLCSLKPLSHVVVATMPI*TVTVLL Trigger: CAACAATACAGTAACAGTCCAAATAGGCATGGTGGC...CACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | TGGCAGATGTTAAGCAGGAAGCAATATAACATGGTAGTAAAGCAAATGCATTCACTGAGAGAGTATGAATaGAAAACATCTGGGCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WQMLSRKQYNMVVKQMHSLREYE*KTSGQD Trigger: GTCTTGCCCAGATGTTTTTCATTCATACTCTCTCAG...TGAATGCATTTGCTTTACTACCATGTTATATTGCTTCCTGCTTAACATCTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | GCTCATATATGTTCCTGGGTACTGAATAATAAAATTGAAATGAGCGAGGAAACAGAATCTTGGGCATTGTaGATGTGGACAAAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHICSWVLNNKIEMSEETESWAL*MWTKPD Trigger: ATCTGGCTTTGTCCACATCCACAATGCCCAAGATTC...TGTTTCCTCGCTCATTTCAATTTTATTATTCAGTACCCAGGAACATATATGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTTTGAATCTTGGGCATTGTaGATGTGGACAAAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSCFIWYYQWVSFYSRIFESWAL*MWTKPD Trigger: ATCTGGCTTTGTCCACATCCACAATGCCCAAGATTC...AAAGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGCCACCATGCCTATTTaGACTGTTACTGTATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSTYKKVSLLIKASITCCATMPI*TVTVLL Trigger: CAACAATACAGTAACAGTCCAAATAGGCATGGTGGC...ACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | GCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGACCATAGACTACATTaGGTAATGTGTCTGTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHTRKFLCSLKPLSHVVVDHRLH*VMCLYR Trigger: CCTATACAGACACATTACCCAATGTAGTCTATGGTC...CACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | ATCCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTCTGAGAGAGTATGAATaGAAAACATCTGGGCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IQVVSFGIISGSHFTAESLREYE*KTSGQD Trigger: GTCTTGCCCAGATGTTTTTCATTCATACTCTCTCAG...AGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATTTAAACCTCCTCTGTTCATCTGAGAGGAAGCAGCTACTCTATCATGAAGCAGTTTCCAAACAATaGTACAGCATACATGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNLNLLCSSERKQLLYHEAVSKQ*YSIHGK Trigger: CTTTCCATGTATGCTGTAGCATTGTTTGGAAACTGC...TTCATGATAGAGTAGCTGCTTCCTCTCAGATGAACAGAGGAGGTTTAAATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGCAGTTTCCAAACAATaGTACAGCATACATGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAHTRKFLCSLKPLSHVVAVSKQ*YSIHGK Trigger: CTTTCCATGTATGCTGTAGCATTGTTTGGAAACTGC...CACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | GCTCATATATGTTCCTGGGTACTGAATAATAAAATTGAAATGAGCGAGGAAACAGCCACCATGCCTATTTaGACTGTTACTGTATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHICSWVLNNKIEMSEETATMPI*TVTVLL Trigger: CAACAATACAGTAACAGTCCAAATAGGCATGGTGGC...TGTTTCCTCGCTCATTTCAATTTTATTATTCAGTACCCAGGAACATATATGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | CCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTTTATTGCTGAGAGAGTATaGATGAAAAACATCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSCFIWYYQWVSFYSRIFIAERV*MKNIWA Trigger: TGCCCAGATGTTTTTCATTCATACTCTCTCAGCAAT...AAAGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR TCA 90 bp | ATCCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTATTGCTGAGAGAGTATaGATGAAAAACATCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IQVVSFGIISGSHFTAESIAERV*MKNIWA Trigger: TGCCCAGATGTTTTTCATTCATACTCTCTCAGCAAT...AGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR GCA 90 bp | GCTCATATATGTTCCTGGGTACTGAATAATAAAATTGAAATGAGCGAGGAAACAGCAGTTTCCAAACAATaGTACAGCATACATGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHICSWVLNNKIEMSEETAVSKQ*YSIHGK Trigger: CTTTCCATGTATGCTGTAGCATTGTTTGGAAACTGC...TGTTTCCTCGCTCATTTCAATTTTATTATTCAGTACCCAGGAACATATATGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTGACCATAGACTACATTaGGTAATGTGTCTGTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQVVSFGIISGSHFTAESDHRLH*VMCLYR Trigger: CCTATACAGACACATTACCCAATGTAGTCTATGGTC...AGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS CCA 90 bp | GGAAAGCAGGGGGAAGCCAAACCAAAAGTGAGCTTCCTCCAGTCCTaGAATACCAATAAGCAGGAAGGTGGCATGGGTGAAGTTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKQGEAKPKVSFLQS*NTNKQEGGMGEVAG Trigger: TCCTGCAACTTCACCCATGCCACCTTCCTGCTTATTGGTATTCCAGGACTGGAGGAAGCTCACTTTTGGTTTGGCTTCCCCCTGCTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS TCA 90 bp | CAGACCAATGAGTGGTACATAGAAAGCCAGGACCACACTAATGTGTaGCACACAAGTCCCAAATGCCTTAGCTCGCTCAGACTTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTNEWYIESQDHTNV*HTSPKCLSSLRLGR Trigger: CCTTCCAAGTCTGAGCGAGCTAAGGCATTTGGGACTTGTGTGTCACACATTAGTGTGGTCCTGGCTTTCTATGTACCACTCATTGGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ACATGTTGTGGTGGGCAAAAGTGGTATCTTCCCTGGGAAAAGAACAAGAACACAAAGAGGGCGAGAATCTaGGGCATTGTGGATGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TCCGGQKWYLPWEKNKNTKRARI*GIVDVD Trigger: GTCCACATCCACAATGCCCAAGATTCTCGCCCTCTT...TGTGTTCTTGTTCTTTTCCCAGGGAAGATACCACTTTTGCCCACCACAACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS GCA 90 bp | CCGCTCTGTTCTCACTATGAAGACCACAATGCAGTTTCCAAACAATaGTACAGCATACATGGAAAGCAGGGGGAAGCCAAACCAAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLCSHYEDHNAVSKQ*YSIHGKQGEAKPKV Trigger: CACTTTTGGTTTGGCTTCCCCCTGCTTTCCATGTATGCTGTAGCATTGTTTGGAAACTGCATTGTGGTCTTCATAGTGAGAACAGAGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ATTCAACATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTTTAGCTCGCTCAGACTaGGAAGGCAGTTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: IQHLYSCTTHIQQALCSVLARSD*EGSCRT Trigger: GGTTCTGCAACTGCCTTCCAAGTCTGAGCGAGCTAA...AACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATGTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ACAGAGTGTAGGAGATTAGATTGTGAAATGCCATGTTTGGGCAAAGAGCAGGTATTAGCTCGCTCAGACTaGGAAGGCAGTTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: TECRRLDCEMPCLGKEQVLARSD*EGSCRT Trigger: GGTTCTGCAACTGCCTTCCAAGTCTGAGCGAGCTAA...TACCTGCTCTTTGCCCAAACATGGCATTTCACAATCTAATCTCCTACACTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | CATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTGGTAAAAGACTTGGAAGGCAGTaGCAGAACCGTTCGTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLYSCTTHIQQALCSVGKRLGRQ*QNRSYD Trigger: ATCATACGAACGGTTCTGCAACTGCCTTCCAAGTCT...TTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | CATCTCTATAGTTGTACAACCCATATCCAGCAGGCCCTTTGCAGTGTTGGTAAACCAGCTTCAATGTCCTaGTCACAGCTGATCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLYSCTTHIQQALCSVGKPASMS*SQLILN Trigger: GTTCAAGATCAGCTGTGACAAGGACATTGAAGCTGG...TTTACCAACACTGCAAAGGGCCTGCTGGATATGGGTTGTACAACTATAGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060187.15 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAAAAGAGGGCGAGAATCTaGGGCATTGTGGATGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKKRARI*GIVDVD Trigger: GTCCACATCCACAATGCCCAAGATTCTCGCCCTCTT...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | AGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTAAGAGGGCGAGAATCTaGGGCATTGTGGATGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: STYKKVSLLIKASITCCGKRARI*GIVDVD Trigger: GTCCACATCCACAATGCCCAAGATTCTCGCCCTCTT...ACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | CACAGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTTTAGCTCGCTCAGACTaGGAAGGCAGTTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: HSTYKKVSLLIKASITCCLARSD*EGSCRT Trigger: GGTTCTGCAACTGCCTTCCAAGTCTGAGCGAGCTAA...ACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAAAGACTTGGAAGGCAGTaGCAGAACCGTTCGTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKRLGRQ*QNRSYD Trigger: ATCATACGAACGGTTCTGCAACTGCCTTCCAAGTCT...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAATTGTCACAGCTGATCTaGAACATAGCCAGAACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKLSQLI*NIARTR Trigger: ACGGGTTCTGGCTATGTTCAAGATCAGCTGTGACAA...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ACAAGTCCTGTTTTCAAATTCCAACCTTTCAGGCTAATATCACCAAGTGACACTTTGTCACAGCTGATCTaGAACATAGCCAGAACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TSPVFKFQPFRLISPSDTLSQLI*NIARTR Trigger: ACGGGTTCTGGCTATGTTCAAGATCAGCTGTGACAA...AGTGTCACTTGGTGATATTAGCCTGAAAGGTTGGAATTTGAAAACAGGACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTGGGCAAACCAGCTTCAATGTCCTaGTCACAGCTGATCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TRKFLCSLKPLSHVVVGKPASMS*SQLILN Trigger: GTTCAAGATCAGCTGTGACAAGGACATTGAAGCTGG...TTTGCCCACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGAGACTTGGAAGGCAGTaGCAGAACCGTTCGTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: TAHTRKFLCSLKPLSHVVRLGRQ*QNRSYD Trigger: ATCATACGAACGGTTCTGCAACTGCCTTCCAAGTCT...CACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | AGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTCCAGCTTCAATGTCCTaGTCACAGCTGATCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: STYKKVSLLIKASITCCGPASMS*SQLILN Trigger: GTTCAAGATCAGCTGTGACAAGGACATTGAAGCTGG...ACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTTTGTCACAGCTGATCTaGAACATAGCCAGAACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: IQVVSFGIISGSHFTAESLSQLI*NIARTR Trigger: ACGGGTTCTGGCTATGTTCAAGATCAGCTGTGACAA...AGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | AGCACATACAAGAAAGTTTCTTTGCTCATTAAAGCCTCTATCACATGTTGTGGTAGCCACCATGCCTATTaGGACTGTTACTGTATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: STYKKVSLLIKASITCCGSHHAY*DCYCIV Trigger: AACAATACAGTAACAGTCCAAATAGGCATGGTGGCT...ACCACAACATGTGATAGAGGCTTTAATGAGCAAAGAAACTTTCTTGTATGTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGTTGTTTCATTTGGTATTATCAGTGGGTCTCATTTTACAGCAGAATCTAGCCACCATGCCTATTaGGACTGTTACTGTATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IQVVSFGIISGSHFTAESSHHAY*DCYCIV Trigger: AACAATACAGTAACAGTCCAAATAGGCATGGTGGCT...AGATTCTGCTGTAAAATGAGACCCACTGATAATACCAAATGAAACAACTTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS CCA 72 bp | GCAGCAGGTAGACATCCCCCATTAGAACATGCACAATaGGATCCAGGCTGTTTCCAAAACGGTGCACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: AAGRHPPLEHAQ*DPGCFQNGAPL Trigger: CAGTGGTGCACCGTTTTGGAAACAGCCTGGATCCCATTGTGCATGTTCTAATGGGGGATGTCTACCTGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
||
| CDS CAA 72 bp | GACACACAAGTCCCAAATGCCTTAGCTCGCTCAGACTaGGAAGGCAGTTGCAGAACCGTTCGTATGATCAGG | + |
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Preference number: 6 (lower is better) Translates to: DTQVPNALARSD*EGSCRTVRMIR Trigger: CCTGATCATACGAACGGTTCTGCAACTGCCTTCCAAGTCTGAGCGAGCTAAGGCATTTGGGACTTGTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
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| CDS CAA 72 bp | CCCAAATGCCTTAGCTCGCTCAGACTTGGAAGGCAGTaGCAGAACCGTTCGTATGATCAGGAAGTAGGACAA | + |
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Preference number: 6 (lower is better) Translates to: PKCLSSLRLGRQ*QNRSYDQEVGQ Trigger: TTGTCCTACTTCCTGATCATACGAACGGTTCTGCAACTGCCTTCCAAGTCTGAGCGAGCTAAGGCATTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
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| CDS CAA 90 bp | CACACAAGTCCCAAATGCCTTAGCTCGCTCAGACTTGGAAGGCAGTaGCAGAACCGTTCGTATGATCAGGAAGTAGGACAAGGAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: HTSPKCLSSLRLGRQ*QNRSYDQEVGQGDE Trigger: TTCATCTCCTTGTCCTACTTCCTGATCATACGAACGGTTCTGCAACTGCCTTCCAAGTCTGAGCGAGCTAAGGCATTTGGGACTTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
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| CDS CCA 72 bp | CCACAATGCAGTTTCCAAACAATGCTACAGCATACATaGAAAGCAGGGGGAAGCCAAACCAAAAGTGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: PQCSFQTMLQHT*KAGGSQTKSEL Trigger: AAGCTCACTTTTGGTTTGGCTTCCCCCTGCTTTCCATGTATGCTGTAGCATTGTTTGGAAACTGCATTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
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| CDS GCA 72 bp | TCTCACTATGAAGACCACAATGCAGTTTCCAAACAATaGTACAGCATACATGGAAAGCAGGGGGAAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SHYEDHNAVSKQ*YSIHGKQGEAK Trigger: TTTGGCTTCCCCCTGCTTTCCATGTATGCTGTAGCATTGTTTGGAAACTGCATTGTGGTCTTCATAGTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060187.15 ENSMUST00000168007.3 ENSMUST00000217123.3 |
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