Pregenerated sensors for OLFR776 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095483Ensembl transcript IDs: ENSMUST00000073704.2, ENSMUST00000213512.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGATCAAGTCAATCAAAATCCCAGCACAGAGAAGGCAGATGATCTaGAGACCTCGCCCCTCACTGAGGAACTATTGGCAGTATACACCT | + |
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Preference number: 1 (lower is better) Translates to: KIKSIKIPAQRRQMI*RPRPSLRNYWQYTP Trigger: AGGTGTATACTGCCAATAGTTCCTCAGTGAGGGGCGAGGTCTGCAGATCATCTGCCTTCTCTGTGCTGGGATTTTGATTGACTTGATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR CCA 90 bp | AGAAGGCAGATGATCTGCAGACCTCGCCCCTCACTGAGGAACTATTaGCAGTATACACCTGCTGGAAGAGAGATTCATTGTTTTATGAGG | + |
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Preference number: 1 (lower is better) Translates to: RRQMICRPRPSLRNY*QYTPAGREIHCFMR Trigger: CCTCATAAAACAATGAATCTCTCTTCCAGCAGGTGTATACTGCCAATAGTTCCTCAGTGAGGGGCGAGGTCTGCAGATCATCTGCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR TCA 90 bp | GGTAGCCTCACAACCATGAACGTATGGGCAGTAATAAGTGGCTTATaGACAAACAGACAAACAGAAAAGGGGCATGAGGTTGTGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GSLTTMNVWAVISGL*TNRQTEKGHEVVRE Trigger: TTCCCTCACAACCTCATGCCCCTTTTCTGTTTGTCTGTTTGTTCATAAGCCACTTATTACTGCCCATACGTTCATGGTTGTGAGGCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR TCA 90 bp | AGTGGCAAGGCTGTCCAGGATGATCAAGCACTTTACGATAGGAACTaGGACCTTCTCTCCAGGATAGAATTTTGTGCTGTTATCATGGTC | + |
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Preference number: 1 (lower is better) Translates to: SGKAVQDDQALYDRN*DLLSRIEFCAVIMV Trigger: GACCATGATAACAGCACAAAATTCTATCCTGGAGAGAAGGTCTCAGTTCCTATCGTAAAGTGCTTGATCATCCTGGACAGCCTTGCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR TCA 90 bp | AAGGCGCCCAGTGAACTGTCTCTTTGCTGCAAGTTTTCATGGTGCTaGAAAGTTTCATATAGACTGCTGGAGAGCAAAGCCATCAATGAT | + |
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Preference number: 1 (lower is better) Translates to: KAPSELSLCCKFSWC*KVSYRLLESKAIND Trigger: ATCATTGATGGCTTTGCTCTCCAGCAGTCTATATGAAACTTTTCAGCACCATGAAAACTTGCAGCAAAGAGACAGTTCACTGGGCGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAAGGCAGATGATCTGCAGACCTCGCCCCTCACTGAGGAACTATTGGCAGACAGGCATACAGGCATaGAGGCAGGCAAAATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: QRRQMICRPRPSLRNYWQTGIQA*RQAKCP Trigger: GGGACATTTTGCCTGCCTGCATGCCTGTATGCCTGT...CTGCCAATAGTTCCTCAGTGAGGGGCGAGGTCTGCAGATCATCTGCCTTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAATCAAAATCCCAGCACAGAGAAGGCAGATGATCTGCAGACCTCGCCCCAGGGGCATGAGGTTGTaGGGGAATGAGTTGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KSIKIPAQRRQMICRPRPRGMRL*GNELER Trigger: CCTTTCCAACTCATTCCCTCACAACCTCATGCCCCT...GGGGCGAGGTCTGCAGATCATCTGCCTTCTCTGTGCTGGGATTTTGATTGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAAGGCAGATGATCTGCAGACCTCGCCCCTCACTGAGGAACTATTGGCAGTTCAGTGAGAGGTTTTaGCCCCAAAGGAACAAGACA | + |
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Preference number: 2 (lower is better) Translates to: QRRQMICRPRPSLRNYWQFSERF*PQRNKT Trigger: TGTCTTGTTCCTTTGGGGGCAAAACCTCTCACTGAA...CTGCCAATAGTTCCTCAGTGAGGGGCGAGGTCTGCAGATCATCTGCCTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGGAGAAGTTATGGGATGTGGAACAGTCGGAGGGTGGACGGGGAAAGGAATTGGCAGTATACACCTaGTGGAAGAGAGATTCATTG | + |
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Preference number: 2 (lower is better) Translates to: GGEKLWDVEQSEGGRGKELAVYT*WKRDSL Trigger: CAATGAATCTCTCTTCCAGCAGGTGTATACTGCCAA...TTCCTTTCCCCGTCCACCCTCCGACTGTTCCACATCCCATAACTTCTCCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAATCAAAATCCCAGCACAGAGAAGGCAGATGATCTGCAGACCTCGCCCCAACAGAAAAGGGGCATaGGGTTGTGAGGGAATGAGT | + |
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Preference number: 2 (lower is better) Translates to: KSIKIPAQRRQMICRPRPNRKGA*GCEGMS Trigger: ACTCATTCCCTCACAACCTCATGCCCCTTTTCTGTT...GGGGCGAGGTCTGCAGATCATCTGCCTTCTCTGTGCTGGGATTTTGATTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGCACACCTTGAATGCAGGAATTAGAGAAAACAATCTCAAGGCGCCCAGTCACAGAGAAGGCAGATaGTCTGCAGACCTCGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: MLHTLNAGIRENNLKAPSHREGR*SADLAP Trigger: AGGGGCGAGGTCTGCAGATCATCTGCCTTCTCTGTG...ACTGGGCGCCTTGAGATTGTTTTCTCTAATTCCTGCATTCAAGGTGTGCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGGAGAAGTTATGGGATGTGGAACAGTCGGAGGGTGGACGGGGAAAGGAATTGAAGCCCAAAGTCTaGAAAACTACACAGGCTATT | + |
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Preference number: 2 (lower is better) Translates to: GGEKLWDVEQSEGGRGKELKPKV*KTTQAI Trigger: AATAGCCTGTGTAGTTTTGCAGACTTTGGGCTTCAA...TTCCTTTCCCCGTCCACCCTCCGACTGTTCCACATCCCATAACTTCTCCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGAGAAGTTATGGGATGTGGAACAGTCGGAGGGTGGACGGGGAAAGGAAATGGGCAGTAATAAGTaGCTTATGAACAAACAGACA | + |
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Preference number: 2 (lower is better) Translates to: GGEKLWDVEQSEGGRGKEMGSNK*LMNKQT Trigger: TGTCTGTTTGTTCATAAGCCACTTATTACTGCCCAT...TTCCTTTCCCCGTCCACCCTCCGACTGTTCCACATCCCATAACTTCTCCCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR CAA 90 bp | GAGAAGGCAGATGATCTGCAGACCTCGCCCCTCACTGAGGAACTATaGGCAGTATACACCTGCTGGAAGAGAGATTCATTGTTTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: EKADDLQTSPLTEEL*AVYTCWKRDSLFYE Trigger: CTCATAAAACAATGAATCTCTCTTCCAGCAGGTGTATACTGCCAATAGTTCCTCAGTGAGGGGCGAGGTCTGCAGATCATCTGCCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGACTGCTGGAGAGCAAAGCCATCAATGATCTTACCCAGCAATAGACATTGCGATGCTGAGCCTAGCTaGACTCCAGGTTCAGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: IDCWRAKPSMILPSNRHCDAEPS*TPGSVR Trigger: TCTCACTGAACCTGGAGTTCAGCTAGGCTCAGCATC...GCAATGTCTATTGCTGGGTAAGATCATTGATGGCTTTGCTCTCCAGCAGTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGCACACCTTGAATGCAGGAATTAGAGAAAACAATCTCAAGGCGCCCAGTACCCTTCACCAAGGCTaGGGGAACCCAAAGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: MLHTLNAGIRENNLKAPSTLHQG*GNPKKE Trigger: CTCTTTCTTTGGGTTCCCTCAGCCTTGGTGAAGGGT...ACTGGGCGCCTTGAGATTGTTTTCTCTAATTCCTGCATTCAAGGTGTGCAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR CCA 90 bp | CACAACCATGAACGTATGGGCAGTAATAAGTGGCTTATGAACAAACAGACAAACCCCAATACTCTCCTCTaGTCTCCACAAAGACATACA | + |
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Preference number: 2 (lower is better) Translates to: HNHERMGSNKWLMNKQTNPNTLL*SPQRHT Trigger: TGTATGTCTTTGTGGAGACCAGAGGAGAGTATTGGG...GTTTGTCTGTTTGTTCATAAGCCACTTATTACTGCCCATACGTTCATGGTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTTGCACACCTTGAATGCAGGAATTAGAGAAAACAATCTCAAGGCGCCCAGTCAGGATAGAATTTTGTaGTGTTATCATGGTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: MLHTLNAGIRENNLKAPSQDRIL*CYHGQK Trigger: CTTTTGACCATGATAACAGCACAAAATTCTATCCTG...ACTGGGCGCCTTGAGATTGTTTTCTCTAATTCCTGCATTCAAGGTGTGCAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGGGGAGAAGTTATGGGATGTGGAACAGTCGGAGGGTGGACGGGGAAAGGAATCCTTCTACATGATTTaGTTCATACCCACAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GGEKLWDVEQSEGGRGKESFYMI*FIPTGL Trigger: CAGGCCTGTGGGTATGAACAAAATCATGTAGAAGGA...TTCCTTTCCCCGTCCACCCTCCGACTGTTCCACATCCCATAACTTCTCCCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR GCA 72 bp | TCAATCAAAATCCCAGCACAGAGAAGGCAGATGATCTaGAGACCTCGCCCCTCACTGAGGAACTATTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SIKIPAQRRQMI*RPRPSLRNYWQ Trigger: CTGCCAATAGTTCCTCAGTGAGGGGCGAGGTCTGCAGATCATCTGCCTTCTCTGTGCTGGGATTTTGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR CAA 90 bp | CAGAGAAGGCAGATGATCTGCAGACCTCGCCCCTCACTGAGGAACTATTGGCAGTTGATTCCTTCATTTTaGCAGGGGCACAATGATATT | + |
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Preference number: 3 (lower is better) Translates to: QRRQMICRPRPSLRNYWQLIPSF*QGHNDI Trigger: AATATCATTGTGCCCCTGCAAAAATGAAGGAATCAA...CTGCCAATAGTTCCTCAGTGAGGGGCGAGGTCTGCAGATCATCTGCCTTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTTGCACACCTTGAATGCAGGAATTAGAGAAAACAATCTCAAGGCGCCCAGTGTGCTTGCTACACTCTaGACCATGAGAAGCAGACTT | + |
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Preference number: 3 (lower is better) Translates to: MLHTLNAGIRENNLKAPSVLATL*TMRSRL Trigger: AAGTCTGCTTCTCATGGTCAAGAGTGTAGCAAGCAC...ACTGGGCGCCTTGAGATTGTTTTCTCTAATTCCTGCATTCAAGGTGTGCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR TCA 72 bp | AATGGGACATCTATTTTAGTCACCCTTCACCAAGGCTaGGGGAACCCAAAGAAAGAGAGTGTGGAAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: NGTSILVTLHQG*GNPKKESVERT Trigger: TGTTCTTTCCACACTCTCTTTCTTTGGGTTCCCTCAGCCTTGGTGAAGGGTGACTAAAATAGATGTCCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR TCA 72 bp | GCTGTCCAGGATGATCAAGCACTTTACGATAGGAACTaGGACCTTCTCTCCAGGATAGAATTTTGTGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: AVQDDQALYDRN*DLLSRIEFCAV Trigger: AACAGCACAAAATTCTATCCTGGAGAGAAGGTCTCAGTTCCTATCGTAAAGTGCTTGATCATCCTGGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR GCA 72 bp | AATAGGTACATAGAAATGGTTACAGGCATACAGGCATaGAGGCAGGCAAAATGTCCCATACACACAAAATAC | + |
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Preference number: 3 (lower is better) Translates to: NRYIEMVTGIQA*RQAKCPIHTKY Trigger: GTATTTTGTGTGTATGGGACATTTTGCCTGCCTGCATGCCTGTATGCCTGTAACCATTTCTATGTACCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGATATCAGTAGCTACATAAAGTTCAGTGTATCCCCATCCTTGCCTGTAACCAATAGTCAGGTTTTGTaGATGCTGAGCCTAGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LDISSYIKFSVSPSLPVTNSQVL*MLSLAE Trigger: TTCAGCTAGGCTCAGCATCAACAAAACCTGACTATT...GGTTACAGGCAAGGATGGGGATACACTGAACTTTATGTAGCTACTGATATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR GCA 72 bp | AGTCTGCAAAACTACACAGGCTATTACCATTTCCCTTaGTTAACCAACATAACACATGGTAAGAACTACAGT | + |
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Preference number: 3 (lower is better) Translates to: SLQNYTGYYHFP*LTNITHGKNYS Trigger: ACTGTAGTTCTTACCATGTGTTATGTTGGTTAAGCAAGGGAAATGGTAATAGCCTGTGTAGTTTTGCAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR TCA 90 bp | GGTGGGGAGAAGTTATGGGATGTGGAACAGTCGGAGGGTGGACGGGGAAAGGAAGAGCAATTGAAGTATTaGGAACAGCCACCCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GGEKLWDVEQSEGGRGKEEQLKY*EQPPLW Trigger: CCAAAGGGGTGGCTGTTCTCAATACTTCAATTGCTC...TTCCTTTCCCCGTCCACCCTCCGACTGTTCCACATCCCATAACTTCTCCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR GCA 90 bp | AAGTCAATCAAAATCCCAGCACAGAGAAGGCAGATGATCTGCAGACCTCGCCCCCTGGTGTGTCTGATATaGCCAAGAGTACAAACTCAG | + |
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Preference number: 4 (lower is better) Translates to: KSIKIPAQRRQMICRPRPLVCLI*PRVQTQ Trigger: CTGAGTTTGTACTCTTGGGCATATCAGACACACCAG...GGGGCGAGGTCTGCAGATCATCTGCCTTCTCTGTGCTGGGATTTTGATTGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR TCA 90 bp | TTAGATATCAGTAGCTACATAAAGTTCAGTGTATCCCCATCCTTGCCTGTAACCCTGCCAGCCATGAGGTaGGGACAAGAAGAGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LDISSYIKFSVSPSLPVTLPAMR*GQEECR Trigger: TCTGCACTCTTCTTGTCCTCACCTCATGGCTGGCAG...GGTTACAGGCAAGGATGGGGATACACTGAACTTTATGTAGCTACTGATATCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR TCA 90 bp | ATAGACTGCTGGAGAGCAAAGCCATCAATGATCTTACCCAGCAATAGACATTGCAAATCCTGCCAGCCATaGGGTGAGGACAAGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: IDCWRAKPSMILPSNRHCKSCQP*GEDKKS Trigger: ACTCTTCTTGTCCTCACCTCATGGCTGGCAGGATTT...GCAATGTCTATTGCTGGGTAAGATCATTGATGGCTTTGCTCTCCAGCAGTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR TCA 90 bp | ATAGACTGCTGGAGAGCAAAGCCATCAATGATCTTACCCAGCAATAGACATTGCCAGCATGGGAGCAATTaGAGTATTGAGAACAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IDCWRAKPSMILPSNRHCQHGSN*SIENSH Trigger: GTGGCTGTTCTCAATACTTCAATTGCTCCCATGCTG...GCAATGTCTATTGCTGGGTAAGATCATTGATGGCTTTGCTCTCCAGCAGTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR CAA 72 bp | CTATTGGCAGTATACACCTGCTGGAAGAGAGATTCATaGTTTTATGAGGGTATGGTCACTGGTAAGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LLAVYTCWKRDS*FYEGMVTGKCP Trigger: GGGGCACTTACCAGTGACCATACCCTCATAAAACAATGAATCTCTCTTCCAGCAGGTGTATACTGCCAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR TCA 90 bp | ATAGACTGCTGGAGAGCAAAGCCATCAATGATCTTACCCAGCAATAGACATTGCGACTTCTGGTGTGTCTaGTATGCCCAAGAGTACAAA | + |
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Preference number: 4 (lower is better) Translates to: IDCWRAKPSMILPSNRHCDFWCV*YAQEYK Trigger: TTTGTACTCTTGGGCATATCAGACACACCAGAAGTC...GCAATGTCTATTGCTGGGTAAGATCATTGATGGCTTTGCTCTCCAGCAGTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR TCA 90 bp | TTAGATATCAGTAGCTACATAAAGTTCAGTGTATCCCCATCCTTGCCTGTAACCCACCCCTTTGGTCAGTaGTGCTCTTTCATTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LDISSYIKFSVSPSLPVTHPFGQ*CSFICR Trigger: TCTGCAAATGAAAGAGCATCACTGACCAAAGGGGTG...GGTTACAGGCAAGGATGGGGATACACTGAACTTTATGTAGCTACTGATATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR CCA 90 bp | ATAGACTGCTGGAGAGCAAAGCCATCAATGATCTTACCCAGCAATAGACATTGCAGCGATCGTAAGACATaGCAGTTAGAAGAAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: IDCWRAKPSMILPSNRHCSDRKT*QLEERT Trigger: AGTTCTTTCTTCTAACTGCCATGTCTTACGATCGCT...GCAATGTCTATTGCTGGGTAAGATCATTGATGGCTTTGCTCTCCAGCAGTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR CAA 72 bp | ACTAAAACAAGAGAACAGAACAAAAATAGTCAGGTTTaGTTGATGCTGAGCCTAGCTGAACTCCAGGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TKTREQNKNSQV*LMLSLAELQVQ Trigger: CTGAACCTGGAGTTCAGCTAGGCTCAGCATCAACAAAACCTGACTATTTTTGTTCTGTTCTCTTGTTTTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR TCA 90 bp | CACAACCATGAACGTATGGGCAGTAATAAGTGGCTTATGAACAAACAGACAAACTGGTTAGGTTTCCAGTaGCACTTAATATGTAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: HNHERMGSNKWLMNKQTNWLGFQ*HLICKQ Trigger: TTGCTTACATATTAAGTGTCACTGGAAACCTAACCA...GTTTGTCTGTTTGTTCATAAGCCACTTATTACTGCCCATACGTTCATGGTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR CAA 72 bp | ATGGTAAGAACTACAGTTCTGAAAATGTTGCACACCTaGAATGCAGGAATTAGAGAAAACAATCTCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: MVRTTVLKMLHT*NAGIRENNLKA Trigger: CGCCTTGAGATTGTTTTCTCTAATTCCTGCATTCAAGGTGTGCAACATTTTCAGAACTGTAGTTCTTACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| 3UTR CAA 72 bp | TGCTCATCATATGATTTAAGGTTGATTCCTTCATTTTaGCAGGGGCACAATGATATTCATGTTAACCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: CSSYDLRLIPSF*QGHNDIHVNQY Trigger: GTACTGGTTAACATGAATATCATTGTGCCCCTGCAAAAATGAAGGAATCAACCTTAAATCATATGATGAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR CAA 90 bp | CACAACCATGAACGTATGGGCAGTAATAAGTGGCTTATGAACAAACAGACAAACAGAACAGCCACCCCTTaGGTCAGTGATGCTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: HNHERMGSNKWLMNKQTNRTATP*VSDALS Trigger: TGAAAGAGCATCACTGACCAAAGGGGTGGCTGTTCT...GTTTGTCTGTTTGTTCATAAGCCACTTATTACTGCCCATACGTTCATGGTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR CAA 90 bp | ATGTTGCACACCTTGAATGCAGGAATTAGAGAAAACAATCTCAAGGCGCCCAGTATGCCTCTAAAAGCCTaGTATCTGAGCAAGACAGTT | + |
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Preference number: 5 (lower is better) Translates to: MLHTLNAGIRENNLKAPSMPLKA*YLSKTV Trigger: AACTGTCTTGCTCAGATACAAGGCTTTTAGAGGCAT...ACTGGGCGCCTTGAGATTGTTTTCTCTAATTCCTGCATTCAAGGTGTGCAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS-3UTR CAA 90 bp | ATAGACTGCTGGAGAGCAAAGCCATCAATGATCTTACCCAGCAATAGACATTGCAACCTCAGAATGGTGTaGATGATGCAGATGTATGAC | + |
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Preference number: 5 (lower is better) Translates to: IDCWRAKPSMILPSNRHCNLRMV*MMQMYD Trigger: GTCATACATCTGCATCATCAACACCATTCTGAGGTT...GCAATGTCTATTGCTGGGTAAGATCATTGATGGCTTTGCTCTCCAGCAGTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213512.2 |
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| CDS TCA 72 bp | AAGGATAAAAATCACAACCTGGACTTCTGGTGTGTCTaGTATGCCCAAGAGTACAAACTCAGTAACCATAGA | + |
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Preference number: 6 (lower is better) Translates to: KDKNHNLDFWCV*YAQEYKLSNHR Trigger: TCTATGGTTACTGAGTTTGTACTCTTGGGCATATCAGACACACCAGAAGTCCAGGTTGTGATTTTTATCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073704.2 ENSMUST00000213512.2 |
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