RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR772 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000107662

Ensembl transcript IDs: ENSMUST00000169800.4, ENSMUST00000214672.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGATATCTCAGTCAGACCACCCTCACATCCTGGGTAAGATCTAGGTaGGAGGGGAAGTGCAGAGGATTGGGAGGAGTCAAGGGAGGGAAA +
Preference number: 1 (lower is better)
Translates to: RYLSQTTLTSWVRSR*EGKCRGLGGVKGGK
Trigger: TTTCCCTCCCTTGACTCCTCCCAATCCTCTGCACTTCCCCTCTCACCTAGATCTTACCCAGGATGTGAGGGTGGTCTGACTGAGATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR CCA 90 bp AAGCTGTTAGCACACATGGAAGGATGTCATTCTAAAAGATGTTTTTaGGAGCAGGAAAGTCAGTCGACCACAAAGAGAAAGAGTGTTCAG +
Preference number: 1 (lower is better)
Translates to: KLLAHMEGCHSKRCF*EQESQSTTKRKSVQ
Trigger: CTGAACACTCTTTCTCTTTGTGGTCGACTGACTTTCCTGCTCCCAAAAACATCTTTTAGAATGACATCCTTCCATGTGTGCTAACAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR TCA 90 bp TGGTTATCCACTCACTGGCTTGTTCCCATTTCTCCTTTGTATCTCTaGAAGTACACGGTAGGGACAGGGTATAATTTTGTTCTTTGTTTT +
Preference number: 1 (lower is better)
Translates to: WLSTHWLVPISPLYL*KYTVGTGYNFVLCF
Trigger: AAAACAAAGAACAAAATTATACCCTGTCCCTACCGTGTACTTTCAGAGATACAAAGGAGAAATGGGAACAAGCCAGTGAGTGGATAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR CAA 90 bp CCTTGTTTGGAGGTTCTAGCAGGGAGCACATCTACTCCTATCCTCTaGACTGAAGACAGGTCCTCCTCTGTTCATGGAAGGTTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: PCLEVLAGSTSTPIL*TEDRSSSVHGRLSS
Trigger: AGAGGACAACCTTCCATGAACAGAGGAGGACCTGTCTTCAGTCAAGAGGATAGGAGTAGATGTGCTCCCTGCTAGAACCTCCAAACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR-3UTR CCA 90 bp TTTTTGAGACCTTGTTTGGAGGTTCTAGCAGGGAGCACATCTACTCCTATCCTCAGGGATAAACTAACATaGAGTAGTGAGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: FLRPCLEVLAGSTSTPILRDKLT*SSEEGR
Trigger: CCTTCCCTCCTCACTACTCCATGTTAGTTTATCCCT...GAGGATAGGAGTAGATGTGCTCCCTGCTAGAACCTCCAAACAAGGTCTCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR-3UTR TCA 90 bp AGACCTTGTTTGGAGGTTCTAGCAGGGAGCACATCTACTCCTATCCTCTTGACTAGGTGTGCATATTCATaGAGTATCACATGGTGTCTT +
Preference number: 2 (lower is better)
Translates to: RPCLEVLAGSTSTPILLTRCAYS*SITWCL
Trigger: AAGACACCATGTGATACTTCATGAATATGCACACCT...AGTCAAGAGGATAGGAGTAGATGTGCTCCCTGCTAGAACCTCCAAACAAGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR-3UTR CCA 90 bp TTTTTGAGACCTTGTTTGGAGGTTCTAGCAGGGAGCACATCTACTCCTATCCTCTCTAAAAGATGTTTTTaGGAGCAGGAAAGTCAGTCG +
Preference number: 2 (lower is better)
Translates to: FLRPCLEVLAGSTSTPILSKRCF*EQESQS
Trigger: CGACTGACTTTCCTGCTCCCAAAAACATCTTTTAGA...GAGGATAGGAGTAGATGTGCTCCCTGCTAGAACCTCCAAACAAGGTCTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR-3UTR TCA 90 bp TTTTTGAGACCTTGTTTGGAGGTTCTAGCAGGGAGCACATCTACTCCTATCCTCTATCACATGGTGTCTTaGTACAAAAGAACACTGTGT +
Preference number: 2 (lower is better)
Translates to: FLRPCLEVLAGSTSTPILYHMVS*YKRTLC
Trigger: ACACAGTGTTCTTTTGTATCAAGACACCATGTGATA...GAGGATAGGAGTAGATGTGCTCCCTGCTAGAACCTCCAAACAAGGTCTCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR CAA 90 bp AACTTCTTTGAGATCAGCCTTTCTATAATCCACATACTTGCCTCTTaGTGTCTAACTTACTTTAGCACAATTGTCTGTGTCTTTCTTGTA +
Preference number: 2 (lower is better)
Translates to: NFFEISLSIIHILAS*CLTYFSTIVCVFLV
Trigger: TACAAGAAAGACACAGACAATTGTGCTAAAGTAAGTTAGACACAAAGAGGCAAGTATGTGGATTATAGAAAGGCTGATCTCAAAGAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR TCA 72 bp AGTCAGACCACCCTCACATCCTGGGTAAGATCTAGGTaGGAGGGGAAGTGCAGAGGATTGGGAGGAGTCAAG +
Preference number: 3 (lower is better)
Translates to: SQTTLTSWVRSR*EGKCRGLGGVK
Trigger: CTTGACTCCTCCCAATCCTCTGCACTTCCCCTCTCACCTAGATCTTACCCAGGATGTGAGGGTGGTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR TCA 72 bp TCTAGCAGGGAGCACATCTACTCCTATCCTCTTGACTaGAGACAGGTCCTCCTCTGTTCATGGAAGGTTGTC +
Preference number: 3 (lower is better)
Translates to: SSREHIYSYPLD*RQVLLCSWKVV
Trigger: GACAACCTTCCATGAACAGAGGAGGACCTGTCTTCAGTCAAGAGGATAGGAGTAGATGTGCTCCCTGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR TCA 72 bp ACAGGTCCTCCTCTGTTCATGGAAGGTTGTCCTCTTTaGTGGAGTAACTTCAGGAGGGATAAACTAACATGG +
Preference number: 3 (lower is better)
Translates to: TGPPLFMEGCPL*WSNFRRDKLTW
Trigger: CCATGTTAGTTTATCCCTCCTGAAGTTACTCCATCAAAGAGGACAACCTTCCATGAACAGAGGAGGACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR CCA 72 bp GCACACATGGAAGGATGTCATTCTAAAAGATGTTTTTaGGAGCAGGAAAGTCAGTCGACCACAAAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: AHMEGCHSKRCF*EQESQSTTKRK
Trigger: CTTTCTCTTTGTGGTCGACTGACTTTCCTGCTCCCAAAAACATCTTTTAGAATGACATCCTTCCATGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR TCA 72 bp ACTCACTGGCTTGTTCCCATTTCTCCTTTGTATCTCTaGAAGTACACGGTAGGGACAGGGTATAATTTTGTT +
Preference number: 3 (lower is better)
Translates to: THWLVPISPLYL*KYTVGTGYNFV
Trigger: AACAAAATTATACCCTGTCCCTACCGTGTACTTTCAGAGATACAAAGGAGAAATGGGAACAAGCCAGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR TCA 72 bp AAGGTGTGCATATTCATGAAGTATCACATGGTGTCTTaGTACAAAAGAACACTGTGTAATAGCCAAACAAGA +
Preference number: 3 (lower is better)
Translates to: KVCIFMKYHMVS*YKRTLCNSQTR
Trigger: TCTTGTTTGGCTATTACACAGTGTTCTTTTGTATCAAGACACCATGTGATACTTCATGAATATGCACACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
CDS-3UTR TCA 90 bp TCAGTCGACCACAAAGAGAAAGAGTGTTCAGGGAAAGTCAACTGGACCCAGAAGCTGTCACACCCTTGTTaGTGGCCACCTCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: SVDHKEKECSGKVNWTQKLSHPC*WPPHPL
Trigger: CAAAGGATGAGGTGGCCATCAACAAGGGTGTGACAG...CTTCTGGGTCCAGTTGACTTTCCCTGAACACTCTTTCTCTTTGTGGTCGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
3UTR CAA 72 bp ATGCAAGTGCAACGTTTTGGTTATCCACTCACTGGCTaGTTCCCATTTCTCCTTTGTATCTCTGAAAGTACA +
Preference number: 4 (lower is better)
Translates to: MQVQRFGYPLTG*FPFLLCISEST
Trigger: TGTACTTTCAGAGATACAAAGGAGAAATGGGAACAAGCCAGTGAGTGGATAACCAAAACGTTGCACTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214672.2
CDS CAA 72 bp GGGGCAATGGAAGTAGTGAGAACTGTCACACCCTTGTaGATGGCCACCTCATCCTTTGCTGAAGGCTTGATG +
Preference number: 6 (lower is better)
Translates to: GAMEVVRTVTPL*MATSSFAEGLM
Trigger: CATCAAGCCTTCAGCAAAGGATGAGGTGGCCATCAACAAGGGTGTGACAGTTCTCACTACTTCCATTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169800.4
ENSMUST00000214672.2
CDS CAA 72 bp ATAGGGGCAATGGAAGTAGTGAGAACTGTCACACCCTaGTTGATGGCCACCTCATCCTTTGCTGAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: IGAMEVVRTVTP*LMATSSFAEGL
Trigger: CAAGCCTTCAGCAAAGGATGAGGTGGCCATCAACAAGGGTGTGACAGTTCTCACTACTTCCATTGCCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169800.4
ENSMUST00000214672.2