RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR77 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051118

Ensembl transcript IDs: ENSMUST00000057596.10, ENSMUST00000217347.2

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGTCTCCCCTCTGGAAACTGCCCTAGCACATCCTCCCTCACCTaGCTCTATGAAGGTGCTCCCACACCCATCTATCTACTCCTGCCT +
Preference number: 1 (lower is better)
Translates to: PGLPSGNCPSTSSLT*LYEGAPTPIYLLLP
Trigger: AGGCAGGAGTAGATAGATGGGTGTGGGAGCACCTTCATAGAGGCAGGTGAGGGAGGATGTGCTAGGGCAGTTTCCAGAGGGGAGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 90 bp AGGTCTCCTGATAGGCCTGAGGCCCTGGCTGTAGCAAACCTCTCATaGTGCCTTCCAACGAAGGGATCTTCAGAGCGGTGGAGAAGCTGC +
Preference number: 1 (lower is better)
Translates to: RSPDRPEALAVANLS*CLPTKGSSERWRSC
Trigger: GCAGCTTCTCCACCGCTCTGAAGATCCCTTCGTTGGAAGGCACCATGAGAGGTTTGCTACAGCCAGGGCCTCAGGCCTATCAGGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 90 bp CCCATCTATCTACTCCTGCCTTCCAGCCTTGACATTCCCCTACACTaGAGCATTGAACCCCCTCAGGCCCAAGGGTCACTCCTCCCAATG +
Preference number: 1 (lower is better)
Translates to: PIYLLLPSSLDIPLH*SIEPPQAQGSLLPM
Trigger: CATTGGGAGGAGTGACCCTTGGGCCTGAGGGGGTTCAATGCTGCAGTGTAGGGGAATGTCAAGGCTGGAAGGCAGGAGTAGATAGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 90 bp GGTCTGGGTGACTCTATCTGGAGTCTGCCTCTTTTGACCCTGCTTTaGTTCAGGTCTCCTGATAGGCCTGAGGCCCTGGCTGTAGCAAAC +
Preference number: 1 (lower is better)
Translates to: GLGDSIWSLPLLTLL*FRSPDRPEALAVAN
Trigger: GTTTGCTACAGCCAGGGCCTCAGGCCTATCAGGAGACCTGAAGCAAAGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTCACCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 90 bp TGTTTGCAGTGGATCTCTTGGGATGTCTCAGAGTGTGGTGTCAGATaGCCTGAGTACAGCAGATCTCCTGGGATGCCTCAGGGTGGTGTC +
Preference number: 1 (lower is better)
Translates to: CLQWISWDVSECGVR*PEYSRSPGMPQGGV
Trigger: GACACCACCCTGAGGCATCCCAGGAGATCTGCTGTACTCAGGGCATCTGACACCACACTCTGAGACATCCCAAGAGATCCACTGCAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 90 bp AGGGCGACTTTCAGTCTGTTGTGTCAGTTGCCCTGCTTGCTGCATTaGCCCAGGGCTGTCTTTGGACTGTTGCATTGGTTGCTCAGTTGC +
Preference number: 1 (lower is better)
Translates to: RATFSLLCQLPCLLH*PRAVFGLLHWLLSC
Trigger: GCAACTGAGCAACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAACTGACACAACAGACTGAAAGTCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 90 bp GGGGCATTATGGCCATTCCCAGTCTTGAGAAGGCTGAACAGACCTTaGGTCCTTGCCACCATGGGCCTTATCAGCCTGGATAGAGTCATC +
Preference number: 1 (lower is better)
Translates to: GALWPFPVLRRLNRP*VLATMGLISLDRVI
Trigger: GATGACTCTATCCAGGCTGATAAGGCCCATGGTGGCAAGGACTCAAGGTCTGTTCAGCCTTCTCAAGACTGGGAATGGCCATAATGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 90 bp CATTGCCCCAGGGCTGTCTTTGGACTGTTGCATTGGTTGCTCAGTTaGCCTGTGTACAGTAGATCTCCTGTGATGCCTTCAGGCTGTGGT +
Preference number: 1 (lower is better)
Translates to: HCPRAVFGLLHWLLS*PVYSRSPVMPSGCG
Trigger: ACCACAGCCTGAAGGCATCACAGGAGATCTACTGTACACAGGGCAACTGAGCAACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 90 bp TCCTGTGATGCCTTCAGGCTGTGGTGTCAGTTGCACTGTTTGCAGTaGATCTCTTGGGATGTCTCAGAGTGTGGTGTCAGATGCCCTGAG +
Preference number: 1 (lower is better)
Translates to: SCDAFRLWCQLHCLQ*ISWDVSECGVRCPE
Trigger: CTCAGGGCATCTGACACCACACTCTGAGACATCCCAAGAGATCCACTGCAAACAGTGCAACTGACACCACAGCCTGAAGGCATCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 90 bp GCCCCTTCTCTAATTCCTCCATCAGGGTCCCTGTGCTCAGTCCATTaGTTGGCTGAGAGTATCCATCTCTGTCTTTGTCAGGCTATGGCA +
Preference number: 1 (lower is better)
Translates to: APSLIPPSGSLCSVH*LAESIHLCLCQAMA
Trigger: TGCCATAGCCTGACAAAGACAGAGATGGATACTCTCAGCCAACCAATGGACTGAGCACAGGGACCCTGATGGAGGAATTAGAGAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 90 bp TACATTTTAAATGTTGTCTCCTTTCCAGGTCTCCCCTCTGGAAACTaGCCTAGCACATCCTCCCTCACCTGCCTCTATGAAGGTGCTCCC +
Preference number: 1 (lower is better)
Translates to: YILNVVSFPGLPSGN*PSTSSLTCLYEGAP
Trigger: GGGAGCACCTTCATAGAGGCAGGTGAGGGAGGATGTGCTAGGGCAGTTTCCAGAGGGGAGACCTGGAAAGGAGACAACATTTAAAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 90 bp TCCAACGAAGGGATCTTCAGAGCGGTGGAGAAGCTGCTGATCTGTTaGTCTGGCTACAGTAGATCTCCTAGGAGGCCTTTAGACTGTTGT +
Preference number: 1 (lower is better)
Translates to: SNEGIFRAVEKLLIC*SGYSRSPRRPLDCC
Trigger: ACAACAGTCTAAAGGCCTCCTAGGAGATCTACTGTAGCCAGAGCAACAGATCAGCAGCTTCTCCACCGCTCTGAAGATCCCTTCGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 90 bp TGTTGCATTGGTTGCTCAGTTGCCCTGTGTACAGTAGATCTCCTGTaGTGCCTTCAGGCTGTGGTGTCAGTTGCACTGTTTGCAGTGGAT +
Preference number: 1 (lower is better)
Translates to: CCIGCSVALCTVDLL*CLQAVVSVALFAVD
Trigger: ATCCACTGCAAACAGTGCAACTGACACCACAGCCTGAAGGCATCACAGGAGATCTACTGTACACAGGGCAACTGAGCAACCAATGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 90 bp TGGCTGGGTTTGGTGATTGTATCTCTAGGTGGGGCACTCTCTGGATaGCCTTTCCTCAATCTCTGCTCTACACTTTGTCTGTGTATTTCC +
Preference number: 1 (lower is better)
Translates to: WLGLVIVSLGGALSG*PFLNLCSTLCLCIS
Trigger: GGAAATACACAGACAAAGTGTAGAGCAGAGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAACCCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 90 bp CTGGCATCTGAAATAATGGCTGGGTTTGGTGATTGTATCTCTAGGTaGGGCACTCTCTGGATGGCCTTTCCTCAATCTCTGCTCTACACT +
Preference number: 1 (lower is better)
Translates to: LASEIMAGFGDCISR*GTLWMAFPQSLLYT
Trigger: AGTGTAGAGCAGAGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAACCCAGCCATTATTTCAGATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 90 bp AGCCTAGCATACCTGTCCTCTGAGAGGCTCCACACAGCAGTTAACTaGAACATATGCAAAGACCCACAGCCAAATATTGGACAGAGCTTG +
Preference number: 1 (lower is better)
Translates to: SLAYLSSERLHTAVN*NICKDPQPNIGQSL
Trigger: CAAGCTCTGTCCAATATTTGGCTGTGGGTCTTTGCATATGTTTCAGTTAACTGCTGTGTGGAGCCTCTCAGAGGACAGGTATGCTAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 90 bp AGAGTATCCATCTCTGTCTTTGTCAGGCTATGGCAAAGGCTTTCATaGCACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATCT +
Preference number: 1 (lower is better)
Translates to: RVSISVFVRLWQRLS*HNHTRHVIKHFLAS
Trigger: AGATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTTGCCATAGCCTGACAAAGACAGAGATGGATACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 90 bp CTTGAGACTTATTCCAGGGGAAGCACAAATCCCTGGCATTATAAATaGTGCTCTATTGCAGACAGGAGCCTAGCATACCTGTCCTCTGAG +
Preference number: 1 (lower is better)
Translates to: LETYSRGSTNPWHYK*CSIADRSLAYLSSE
Trigger: CTCAGAGGACAGGTATGCTAGGCTCCTGTCTGCAATAGAGCATCATTTATAATGCCAGGGATTTGTGCTTCCCCTGGAATAAGTCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 90 bp CTTGCCTCTTACCATATGTTTATCTCTGATGTTTGCTGGTCTGGGTaGCTCTATCTGGAGTCTGCCTCTTTTGACCCTGCTTTGCTTCAG +
Preference number: 1 (lower is better)
Translates to: LASYHMFISDVCWSG*LYLESASFDPALLQ
Trigger: CTGAAGCAAAGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTCACCCAGACCAGCAAACATCAGAGATAAACATATGGTAAGAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 90 bp ACCATATGTTTATCTCTGATGTTTGCTGGTCTGGGTGACTCTATCTaGAGTCTGCCTCTTTTGACCCTGCTTTGCTTCAGGTCTCCTGAT +
Preference number: 1 (lower is better)
Translates to: TICLSLMFAGLGDSI*SLPLLTLLCFRSPD
Trigger: ATCAGGAGACCTGAAGCAAAGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTCACCCAGACCAGCAAACATCAGAGATAAACATATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 90 bp TGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTTTATCTCTaGTGTTTGCTGGTCTGGGTGACTCTATCTGGAGTCTGCCTCTTT +
Preference number: 1 (lower is better)
Translates to: CCLWPCTCLLPYVYL*CLLVWVTLSGVCLF
Trigger: AAAGAGGCAGACTCCAGATAGAGTCACCCAGACCAGCAAACATCAGAGATAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 90 bp TCTACAACAAAGGCAGGGATACAGATGGAGCAGAGACTAAGGGAATaGCCAACCAATAACCCATTCAACTTGAGACTTATTCCAGGGGAA +
Preference number: 1 (lower is better)
Translates to: STTKAGIQMEQRLRE*PTNNPFNLRLIPGE
Trigger: TTCCCCTGGAATAAGTCTCAAGTTGAATGGGTTATTGGTTGGCCATTCCCTTAGTCTCTGCTCCATCTGTATCCCTGCCTTTGTTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 90 bp CACAGCCAAATATTGGACAGAGCTTGTGGACTCTTATGGGGAATTTaGGAAATTATTGACACCCAAAAGGAGGAGCTAACGCCACAGAAA +
Preference number: 1 (lower is better)
Translates to: HSQILDRACGLLWGI*EIIDTQKEELTPQK
Trigger: TTTCTGTGGCGTTAGCTCCTCCTTTTGGGTGTCAATAATTTCCCAAATTCCCCATAAGAGTCCACAAGCTCTGTCCAATATTTGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 90 bp ATCTCCCAGAACTGTAAACTTGCCAGTCTCCTCTCCTTTCCATGGTaGTGTTACATGCCAGAACACAGTACAGAAGAAACTTATCCTACT +
Preference number: 1 (lower is better)
Translates to: ISQNCKLASLLSFPW*CYMPEHSTEETYPT
Trigger: AGTAGGATAAGTTTCTTCTGTACTGTGTTCTGGCATGTAACACCACCATGGAAAGGAGAGGAGACTGGCAAGTTTACAGTTCTGGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 90 bp CTTGCTGTGATGAGAGAACTGCATTCTGATGATGCCCAAATATATTaGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGT +
Preference number: 1 (lower is better)
Translates to: LAVMRELHSDDAQIY*LLLLMALHLPLTIC
Trigger: ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTGGGCATCATCAGAATGCAGTTCTCTCATCACAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 90 bp GTTGGTTCCTGTTATGCTTGTTTTGGTAGGTTGCTTTATGTGCTGTaGTTCTCTCGTATTGGCGTTGTTGTGAGATGCTTGATATCTTGC +
Preference number: 1 (lower is better)
Translates to: VGSCYACFGRLLYVL*FSRIGVVVRCLISC
Trigger: GCAAGATATCAAGCATCTCACAACAACGCCAATACGAGAGAATCACAGCACATAAAGCAACCTACCAAAACAAGCATAACAGGAACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 90 bp ACTGTAAACTTGCCAGTCTCCTCTCCTTTCCATGGTGGTGTTACATaGCAGAACACAGTACAGAAGAAACTTATCCTACTCATAAAAGAG +
Preference number: 1 (lower is better)
Translates to: TVNLPVSSPFHGGVT*QNTVQKKLILLIKE
Trigger: CTCTTTTATGAGTAGGATAAGTTTCTTCTGTACTGTGTTCTGGCATGTAACACCACCATGGAAAGGAGAGGAGACTGGCAAGTTTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 90 bp GAATATCCTGTGTGCTATTTTGTGACTGGGTTACCTCACTCAGCATaGTATTGTCTACACTTTTATGTCTGTTCTGACTCTGGTTCCTCT +
Preference number: 1 (lower is better)
Translates to: EYPVCYFVTGLPHSA*YCLHFYVCSDSGSS
Trigger: AGAGGAACCAGAGTCAGAACAGACATAAAAGTGTAGACAATATCATGCTGAGTGAGGTAACCCAGTCACAAAATAGCACACAGGATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 90 bp GTTACCTCACTCAGCATGATATTGTCTACACTTTTATGTCTGTTCTaGCTCTGGTTCCTCTGGTACAGATATATATCTTTTGTGCCTTCT +
Preference number: 1 (lower is better)
Translates to: VTSLSMILSTLLCLF*LWFLWYRYISFVPS
Trigger: AGAAGGCACAAAAGATATATATCTGTACCAGAGGAACCAGAGTCAGAACAGACATAAAAGTGTAGACAATATCATGCTGAGTGAGGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp TGGTCCAGTCCCCAGTTATTCCAGAGGTTTGGCCAGTTGACACTGTaGCTCCTCACATGGGACTGCAAACACCCACACCTCCTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: WSSPQLFQRFGQLTL*LLTWDCKHPHLLQP
Trigger: GGGCTGAAGGAGGTGTGGGTGTTTGCAGTCCCATGTGAGGAGCAACAGTGTCAACTGGCCAAACCTCTGGAATAACTGGGGACTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp ATCTACTCCTGCCTTCCAGCCTTGACATTCCCCTACACTGCAGCATaGAACCCCCTCAGGCCCAAGGGTCACTCCTCCCAATGTTGTCCA +
Preference number: 2 (lower is better)
Translates to: IYSCLPALTFPYTAA*NPLRPKGHSSQCCP
Trigger: TGGACAACATTGGGAGGAGTGACCCTTGGGCCTGAGGGGGTTCAATGCTGCAGTGTAGGGGAATGTCAAGGCTGGAAGGCAGGAGTAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp ATTCCCCTAACTGGGCTGTCTTGTCTGGCCTTACTGGGAGAGGATTTGCCTAGCAAGGAGGGGACTGGGTaGAGGAGGGCCTCTGTAAGT +
Preference number: 2 (lower is better)
Translates to: IPLTGLSCLALLGEDLPSKEGTG*RRASVS
Trigger: ACTTACAGAGGCCCTCCTCCACCCAGTCCCCTCCTT...GCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAGACAGCCCAGTTAGGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp CAGGGCGACTTTCAGTCTGTTGTGTCAGTTGCCCTGCTTGCTGCATaGCCCCAGGGCTGTCTTTGGACTGTTGCATTGGTTGCTCAGTTG +
Preference number: 2 (lower is better)
Translates to: QGDFQSVVSVALLAA*PQGCLWTVALVAQL
Trigger: CAACTGAGCAACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAACTGACACAACAGACTGAAAGTCGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 90 bp CTGATGTTTGCTGGTCTGGGTGACTCTATCTGGAGTCTGCCTCTTTaGACCCTGCTTTGCTTCAGGTCTCCTGATAGGCCTGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: LMFAGLGDSIWSLPL*TLLCFRSPDRPEAL
Trigger: CAGGGCCTCAGGCCTATCAGGAGACCTGAAGCAAAGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTCACCCAGACCAGCAAACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR TCA 90 bp ATTCCCCTAACTGGGCTGTCTTGTCTGGCCTTACTGGGAGAGGATTTGCCTAGCACTACATCCCTCAGATaGGAAAAGGAGGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: IPLTGLSCLALLGEDLPSTTSLR*EKEGTG
Trigger: CCCAGTCCCCTCCTTTTCTCATCTGAGGGATGTAGT...GCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAGACAGCCCAGTTAGGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp TGTTGTGTCAGTTGCCCTGCTTGCTGCATTGCCCCAGGGCTGTCTTaGGACTGTTGCATTGGTTGCTCAGTTGCCCTGTGTACAGTAGAT +
Preference number: 2 (lower is better)
Translates to: CCVSCPACCIAPGLS*DCCIGCSVALCTVD
Trigger: ATCTACTGTACACAGGGCAACTGAGCAACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAACTGACACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 90 bp CTGGGCTGTCTTGTCTGGCCTTACTGGGAGAGGATTTGCCTAGCCTaGTGGAGACTTAACATACCACGGTATGGGAAACTACATCCCTCA +
Preference number: 2 (lower is better)
Translates to: LGCLVWPYWERICLA*WRLNIPRYGKLHPS
Trigger: TGAGGGATGTAGTTTCCCATACCGTGGTATGTTAAGTCTCCACAAGGCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAGACAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTAAGGCTGAACAGACCTTaGGTCCTTGCCACCATGGGC +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELRLNRP*VLATMG
Trigger: GCCCATGGTGGCAAGGACTCAAGGTCTGTTCAGCCT...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 90 bp CCTTCTCTAATTCCTCCATCAGGGTCCCTGTGCTCAGTCCATTGGTaGGCTGAGAGTATCCATCTCTGTCTTTGTCAGGCTATGGCAAAG +
Preference number: 2 (lower is better)
Translates to: PSLIPPSGSLCSVHW*AESIHLCLCQAMAK
Trigger: CTTTGCCATAGCCTGACAAAGACAGAGATGGATACTCTCAGCCAACCAATGGACTGAGCACAGGGACCCTGATGGAGGAATTAGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp CCTCAGGGTGGTGTCTTCAGGGGAATATACTATCTAGAAGTCTGTTaGGTAGAAAGGACCAGCCATAAGGGGGTGGCATTCAGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: PQGGVFRGIYYLEVC*VERTSHKGVAFSEW
Trigger: CCACTCACTGAATGCCACCCCCTTATGGCTGGTCCTTTCTACCAAACAGACTTCTAGATAGTATATTCCCCTGAAGACACCACCCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 90 bp GGGGGCCCTGGGTTCCATCCAATAGATGACTGTGAGCATCCACTTTaGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTAGCTATA +
Preference number: 2 (lower is better)
Translates to: GGPGFHPIDDCEHPL*YLPGTGIASQELAI
Trigger: TATAGCTAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACAGTCATCTATTGGATGGAACCCAGGGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR GCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTACCATCAGGGTCCCTGTaGTCAGTCCATTGGTTGGCT +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELPSGSL*SVHWLA
Trigger: AGCCAACCAATGGACTGAGCACAGGGACCCTGATGG...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR GCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTAACATCCTCCCTCACCTaGCTCTATGAAGGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELTSSLT*LYEGAP
Trigger: GGGAGCACCTTCATAGAGGCAGGTGAGGGAGGATGT...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATCTTGTCTGGCCTTACTaGGAGAGGATTTGCCTAGCC +
Preference number: 2 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHLVWPY*ERICLA
Trigger: GGCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAG...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTAGGTGATTTTGGGGTGTaGTGGGTCCTGAGTCCACTA +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELGDFGV*WVLSPL
Trigger: TAGTGGACTCAGGACCCACCACACCCCAAAATCACC...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR TCA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATGCCATAAGGTGCTGGTaGAGGTCAGAGGACAAATTT +
Preference number: 2 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHAIRCW*RSEDKF
Trigger: AAATTTGTCCTCTGACCTTCACCAGCACCTTATGGC...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp TTTGGTGATTGTATCTCTAGGTGGGGCACTCTCTGGATGGCCTTTCCTCAATCTCTGTGTGCTATTTTGTaGCTGGGTTACCTCACTCAG +
Preference number: 2 (lower is better)
Translates to: FGDCISRWGTLWMAFPQSLCAIL*LGYLTQ
Trigger: CTGAGTGAGGTAACCCAGTCACAAAATAGCACACAG...AGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTCCCTGCTTGCTGCATTaGCCCAGGGCTGTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: QIYWLLLLMALHLPLTICPCLLH*PRAVFG
Trigger: TCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGG...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp CTGTTGGTTCCTGTTATGCTTGTTTTGGTAGGTTGCTTTATGTGCTGTGATTCTAAGGAGGGGACTGGGTaGAGGAGGGCCTCTGTAAGT +
Preference number: 2 (lower is better)
Translates to: LLVPVMLVLVGCFMCCDSKEGTG*RRASVS
Trigger: ACTTACAGAGGCCCTCCTCCACCCAGTCCCCTCCTT...AGAATCACAGCACATAAAGCAACCTACCAAAACAAGCATAACAGGAACCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATCATAGTCATCTAACCTaGACCCTATGGGGCAATCAG +
Preference number: 2 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHHSHLT*TLWGNQ
Trigger: CTGATTGCCCCATAGGGTCCAGGTTAGATGACTATG...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TTTGGTGATTGTATCTCTAGGTGGGGCACTCTCTGGATGGCCTTTCCTCAATCTCTCTCCTTTCCATGGTaGTGTTACATGCCAGAACAC +
Preference number: 2 (lower is better)
Translates to: FGDCISRWGTLWMAFPQSLSFPW*CYMPEH
Trigger: GTGTTCTGGCATGTAACACCACCATGGAAAGGAGAG...AGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTGCAGATCTCCTGGGATaGCTCAGGGTGGTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: QIYWLLLLMALHLPLTICADLLG*LRVVSS
Trigger: TGAAGACACCACCCTGAGGCATCCCAGGAGATCTGC...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATATTTGCCTAGCCTTGTaGAGACTTAACATACCACGG +
Preference number: 2 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHICLAL*RLNIPR
Trigger: CCGTGGTATGTTAAGTCTCCACAAGGCTAGGCAAAT...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TCCATGGTGGTGTTACATGCCAGAACACAGTACAGAAGAAACTTATCCTACTCACTTGTCTGGCCTTACTaGGAGAGGATTTGCCTAGCC +
Preference number: 2 (lower is better)
Translates to: SMVVLHARTQYRRNLSYSLVWPY*ERICLA
Trigger: GGCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAG...TGAGTAGGATAAGTTTCTTCTGTACTGTGTTCTGGCATGTAACACCACCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TCCATGGTGGTGTTACATGCCAGAACACAGTACAGAAGAAACTTATCCTACTCACTAACCTGGACCCTATaGGGCAATCAGACACAGACC +
Preference number: 2 (lower is better)
Translates to: SMVVLHARTQYRRNLSYSLTWTL*GNQTQT
Trigger: GGTCTGTGTCTGATTGCCCCATAGGGTCCAGGTTAG...TGAGTAGGATAAGTTTCTTCTGTACTGTGTTCTGGCATGTAACACCACCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTACCCACAGCCAAATATTaGACAGAGCTTGTGGACTCT +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELPTAKY*TELVDS
Trigger: AGAGTCCACAAGCTCTGTCCAATATTTGGCTGTGGG...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTGGGGCACTCTCTGGATaGCCTTTCCTCAATCTCTGC +
Preference number: 2 (lower is better)
Translates to: QIYWLLLLMALHLPLTICGALSG*PFLNLC
Trigger: GCAGAGATTGAGGAAAGGCCATCCAGAGAGTGCCCC...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR TCA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTACTACATCCCTCAGATaGGAAAAGGAGGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: QIYWLLLLMALHLPLTICTTSLR*EKEGTG
Trigger: CCCAGTCCCCTCCTTTTCTCATCTGAGGGATGTAGT...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR TCA 90 bp TTTGGTGATTGTATCTCTAGGTGGGGCACTCTCTGGATGGCCTTTCCTCAATCTCACACAGCAGTTAACTaGAACATATGCAAAGACCCA +
Preference number: 2 (lower is better)
Translates to: FGDCISRWGTLWMAFPQSHTAVN*NICKDP
Trigger: TGGGTCTTTGCATATGTTTCAGTTAACTGCTGTGTG...AGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTATCTCTAGTGCCAGAATaGTATTCAGCTCTACAGGTC +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELSLVPE*YSALQV
Trigger: GACCTGTAGAGCTGAATATCATTCTGGCACTAGAGA...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp TTTGGTGATTGTATCTCTAGGTGGGGCACTCTCTGGATGGCCTTTCCTCAATCTATAGCAGTGGGGATATaGAACCTGAAAAGGTCACTT +
Preference number: 2 (lower is better)
Translates to: FGDCISRWGTLWMAFPQSIAVGI*NLKRSL
Trigger: AAGTGACCTTTTCAGGTTCCATATCCCCACTGCTAT...AGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTAAGCATACCTGTCCTCTaGGAGGCTCCACACAGCAGT +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLSIPVL*EAPHSS
Trigger: ACTGCTGTGTGGAGCCTCTCAGAGGACAGGTATGCT...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAAAGCATACCTGTCCTCTaGGAGGCTCCACACAGCAGT +
Preference number: 2 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMESIPVL*EAPHSS
Trigger: ACTGCTGTGTGGAGCCTCTCAGAGGACAGGTATGCT...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTAATAACCCATTCAACTTaGGACTTATTCCAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELITHST*DLFQGK
Trigger: CTTCCCCTGGAATAAGTCTCAAGTTGAATGGGTTAT...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR TCA 90 bp CTGTTGGTTCCTGTTATGCTTGTTTTGGTAGGTTGCTTTATGTGCTGTGATTCTAGCCTCTACATTCCATaGTGTGCCAGTGACCTAGGA +
Preference number: 2 (lower is better)
Translates to: LLVPVMLVLVGCFMCCDSSLYIP*CASDLG
Trigger: TCCTAGGTCACTGGCACATCATGGAATGTAGAGGCT...AGAATCACAGCACATAAAGCAACCTACCAAAACAAGCATAACAGGAACCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR GCA 90 bp TTTGGTGATTGTATCTCTAGGTGGGGCACTCTCTGGATGGCCTTTCCTCAATCTATTCAGAACAGGTCATaGTTATCTCCCAGAACTGTA +
Preference number: 2 (lower is better)
Translates to: FGDCISRWGTLWMAFPQSIQNRS*LSPRTV
Trigger: TACAGTTCTGGGAGATAAGCATGACCTGTTCTGAAT...AGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATTTGAAACCTCAAAACTaGATTCAGAACAGGTCATGC +
Preference number: 2 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHLKPQN*IQNRSC
Trigger: GCATGACCTGTTCTGAATGCAGTTTTGAGGTTTCAA...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTAATGCTGGCTCTTCTTTaGATATCCAGTCTGTTAGCT +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELMLALL*ISSLLA
Trigger: AGCTAACAGACTGGATATGCAAAGAAGAGCCAGCAT...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 90 bp ATGGAGCAGAGACTAAGGGAATGGCCAACCAATAACCCATTCAACTaGAGACTTATTCCAGGGGAAGCACAAATCCCTGGCATTATAAAT +
Preference number: 2 (lower is better)
Translates to: MEQRLREWPTNNPFN*RLIPGEAQIPGIIN
Trigger: ATTTATAATGCCAGGGATTTGTGCTTCCCCTGGAATAAGTCTCAAGTTGAATGGGTTATTGGTTGGCCATTCCCTTAGTCTCTGCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp GATGATGCCCAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTaGCCTCTTACCATATGTTTATCTCTGATGTTTGCTGGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: DDAQIYWLLLLMALH*PLTICLSLMFAGLG
Trigger: ACCCAGACCAGCAAACATCAGAGATAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTGGGCATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR TCA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATTCAAAGATCCAGGGATaGAAAGACTTTGAATATTGG +
Preference number: 2 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHSKIQG*KDFEYW
Trigger: CCAATATTCAAAGTCTTTTCATCCCTGGATCTTTGA...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp ATTGTTCTATCTACAACAAAGGCAGGGATACAGATGGAGCAGAGACTAAGGGAACCCTGGCATTATAAATaGTGCTCTATTGCAGACAGG +
Preference number: 2 (lower is better)
Translates to: IVLSTTKAGIQMEQRLREPWHYK*CSIADR
Trigger: CCTGTCTGCAATAGAGCATCATTTATAATGCCAGGG...TTCCCTTAGTCTCTGCTCCATCTGTATCCCTGCCTTTGTTGTAGATAGAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp TTTGGTGATTGTATCTCTAGGTGGGGCACTCTCTGGATGGCCTTTCCTCAATCTTCGCTAATACTTACCTaGCACAATGAATTGCATACA +
Preference number: 2 (lower is better)
Translates to: FGDCISRWGTLWMAFPQSSLILT*HNELHT
Trigger: TGTATGCAATTCATTGTGGCAGGTAAGTATTAGCGA...AGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp ATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTTTAGAGTGTGGTGTCAGATaGCCTGAGTACAGCAGATCT +
Preference number: 2 (lower is better)
Translates to: IYWLLLLMALHLPLTICLECGVR*PEYSRS
Trigger: AGATCTGCTGTACTCAGGGCATCTGACACCACACTC...TAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTACTAACCTGGACCCTATaGGGCAATCAGACACAGACC +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLLTWTL*GNQTQT
Trigger: GGTCTGTGTCTGATTGCCCCATAGGGTCCAGGTTAG...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATAAACAGAGCAGAGTATaGTACATACATAAACACAGA +
Preference number: 2 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHKQSRV*YIHKHR
Trigger: TCTGTGTTTATGTATGTAGCATACTCTGCTCTGTTT...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TCCATGGTGGTGTTACATGCCAGAACACAGTACAGAAGAAACTTATCCTACTCAATAGCAGTGGGGATATaGAACCTGAAAAGGTCACTT +
Preference number: 2 (lower is better)
Translates to: SMVVLHARTQYRRNLSYSIAVGI*NLKRSL
Trigger: AAGTGACCTTTTCAGGTTCCATATCCCCACTGCTAT...TGAGTAGGATAAGTTTCTTCTGTACTGTGTTCTGGCATGTAACACCACCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TTTGGTGATTGTATCTCTAGGTGGGGCACTCTCTGGATGGCCTTTCCTCAATCTGGTTTTCTGAACTTTTaGGCTAATACTCACTTACAA +
Preference number: 2 (lower is better)
Translates to: FGDCISRWGTLWMAFPQSGFLNF*ANTHLQ
Trigger: TTGTAAGTGAGTATTAGCCCAAAAGTTCAGAAAACC...AGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp CATTCTGATGATGCCCAAATATATTGGCTTCTGTTGCTTATGGCCTaGCACTTGCCTCTTACCATATGTTTATCTCTGATGTTTGCTGGT +
Preference number: 2 (lower is better)
Translates to: HSDDAQIYWLLLLMA*HLPLTICLSLMFAG
Trigger: ACCAGCAAACATCAGAGATAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTGGGCATCATCAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR TCA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAAGCCATAAGGTGCTGGTaGAGGTCAGAGGACAAATTT +
Preference number: 2 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMEAIRCW*RSEDKF
Trigger: AAATTTGTCCTCTGACCTTCACCAGCACCTTATGGC...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp ATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTTTATGTAAGTGGTGGACTTaGAGGAAGATCAGCAATTGG +
Preference number: 2 (lower is better)
Translates to: IYWLLLLMALHLPLTICLCKWWT*RKISNW
Trigger: CCAATTGCTGATCTTCCTTCAAGTCCACCACTTACA...TAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR GCA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTAAAACAGAGCAGAGTATaGTACATACATAAACACAGA +
Preference number: 2 (lower is better)
Translates to: CEHPLLYLPGTGIASQELKQSRV*YIHKHR
Trigger: TCTGTGTTTATGTATGTAGCATACTCTGCTCTGTTT...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTACATAGTCATCTAACCTaGACCCTATGGGGCAATCAG +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLHSHLT*TLWGNQ
Trigger: CTGATTGCCCCATAGGGTCCAGGTTAGATGACTATG...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTACCCACAGCCAAATATTaGACAGAGCTTGTGGACTCT +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLPTAKY*TELVDS
Trigger: AGAGTCCACAAGCTCTGTCCAATATTTGGCTGTGGG...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAACTCTCCTTTCCATGGTaGTGTTACATGCCAGAACAC +
Preference number: 2 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMELSFPW*CYMPEH
Trigger: GTGTTCTGGCATGTAACACCACCATGGAAAGGAGAG...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTTTACCTTGGGTTTTCTaGACTTTTGGGCTAATACTC +
Preference number: 2 (lower is better)
Translates to: QIYWLLLLMALHLPLTICLPWVF*TFGLIL
Trigger: GAGTATTAGCCCAAAAGTTCAGAAAACCCAAGGTAA...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp ATTGTTCTATCTACAACAAAGGCAGGGATACAGATGGAGCAGAGACTAAGGGAAGCTTGTGGACTCTTATaGGGAATTTGGGAAATTATT +
Preference number: 2 (lower is better)
Translates to: IVLSTTKAGIQMEQRLREACGLL*GIWEII
Trigger: AATAATTTCCCAAATTCCCCATAAGAGTCCACAAGC...TTCCCTTAGTCTCTGCTCCATCTGTATCCCTGCCTTTGTTGTAGATAGAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTACAGAGACTAAGGGAATaGCCAACCAATAACCCATTC +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLQRLRE*PTNNPF
Trigger: GAATGGGTTATTGGTTGGCCATTCCCTTAGTCTCTG...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTAATAACCCATTCAACTTaGGACTTATTCCAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLITHST*DLFQGK
Trigger: CTTCCCCTGGAATAAGTCTCAAGTTGAATGGGTTAT...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp AAGGTCACTTCCTTTAACCAGACACCAACCATTCCACAATGTTTTTaGACCAAAAATTGTTCTATCTACAACAAAGGCAGGGATACAGAT +
Preference number: 2 (lower is better)
Translates to: KVTSFNQTPTIPQCF*TKNCSIYNKGRDTD
Trigger: ATCTGTATCCCTGCCTTTGTTGTAGATAGAACAATTTTTGGTCAAAAAACATTGTGGAATGGTTGGTGTCTGGTTAAAGGAAGTGACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTACACTTCCACTTTGATTaGTCTTTGAATTTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLHFHFD*SLNFWG
Trigger: ACCCCAGAAATTCAAAGATCAATCAAAGTGGAAGTG...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATACTTGACAGAAGCTTaGAACCTCAAAACTGCATTC +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLYLTEA*NLKTAF
Trigger: GAATGCAGTTTTGAGGTTTCAAGCTTCTGTCAAGTA...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR TCA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAATACTTGACAGAAGCTTaGAACCTCAAAACTGCATTC +
Preference number: 2 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMEYLTEA*NLKTAF
Trigger: GAATGCAGTTTTGAGGTTTCAAGCTTCTGTCAAGTA...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAAATTCAGAACAGGTCATaGTTATCTCCCAGAACTGTA +
Preference number: 2 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMEIQNRS*LSPRTV
Trigger: TACAGTTCTGGGAGATAAGCATGACCTGTTCTGAAT...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR GCA 90 bp CTGTTGGTTCCTGTTATGCTTGTTTTGGTAGGTTGCTTTATGTGCTGTGATTCTAATGAATATCCTGTGTaGTATTTTGTGACTGGGTTA +
Preference number: 2 (lower is better)
Translates to: LLVPVMLVLVGCFMCCDSNEYPV*YFVTGL
Trigger: TAACCCAGTCACAAAATAGCACACAGGATATTCATT...AGAATCACAGCACATAAAGCAACCTACCAAAACAAGCATAACAGGAACCAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CCA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTGCTGTGTTTCTTAGTTaGATGAAATTTGGACCATTT +
Preference number: 2 (lower is better)
Translates to: QIYWLLLLMALHLPLTICAVFLS*MKFGPF
Trigger: AAATGGTCCAAATTTCATCCAACTAAGAAACACAGC...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR TCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATCAAAGATCCAGGGATaGAAAGACTTTGAATATTGG +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLSKIQG*KDFEYW
Trigger: CCAATATTCAAAGTCTTTTCATCCCTGGATCTTTGA...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAACTCTTATGGGGAATTTaGGAAATTATTGACACCCAA +
Preference number: 2 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMELLWGI*EIIDTQ
Trigger: TTGGGTGTCAATAATTTCCCAAATTCCCCATAAGAG...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTAGCTTGTGGACTCTTATaGGGAATTTGGGAAATTATT +
Preference number: 2 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLACGLL*GIWEII
Trigger: AATAATTTCCCAAATTCCCCATAAGAGTCCACAAGC...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp TCAAATTTACTGGACTTTCTTAAGATTCTTCACCAGCATTACACTTaGATAATATGCTGCAGAGTAGAGAAGAATTCTCTAGTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: SNLLDFLKILHQHYT*IICCRVEKNSLVPE
Trigger: TTCTGGCACTAGAGAATTCTTCTCTACTCTGCAGCATATTATCAAAGTGTAATGCTGGTGAAGAATCTTAAGAAAGTCCAGTAAATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp GGTTCCTCTGGTACAGATATATATCTTTTGTGCCTTCTGAAATATTaGTTTCAACCATCTCATCAATGTCATATATATCACTTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: GSSGTDIYLLCLLKY*FQPSHQCHIYHFSH
Trigger: GTGGGAGAAGTGATATATATGACATTGATGAGATGGTTGAAACAAATATTTCAGAAGGCACAAAAGATATATATCTGTACCAGAGGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 90 bp TATGTCTGTTCTGACTCTGGTTCCTCTGGTACAGATATATATCTTTaGTGCCTTCTGAAATATTTGTTTCAACCATCTCATCAATGTCAT +
Preference number: 2 (lower is better)
Translates to: YVCSDSGSSGTDIYL*CLLKYLFQPSHQCH
Trigger: ATGACATTGATGAGATGGTTGAAACAAATATTTCAGAAGGCACAAAAGATATATATCTGTACCAGAGGAACCAGAGTCAGAACAGACATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 72 bp CTACTCCTGCCTTCCAGCCTTGACATTCCCCTACACTaGAGCATTGAACCCCCTCAGGCCCAAGGGTCACTC +
Preference number: 3 (lower is better)
Translates to: LLLPSSLDIPLH*SIEPPQAQGSL
Trigger: GAGTGACCCTTGGGCCTGAGGGGGTTCAATGCTGCAGTGTAGGGGAATGTCAAGGCTGGAAGGCAGGAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 72 bp AGGCCTGAGGCCCTGGCTGTAGCAAACCTCTCATGGTaGCTTCCAACGAAGGGATCTTCAGAGCGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: RPEALAVANLSW*LPTKGSSERWR
Trigger: TCTCCACCGCTCTGAAGATCCCTTCGTTGGAAGGCACCATGAGAGGTTTGCTACAGCCAGGGCCTCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp GATAGGCCTGAGGCCCTGGCTGTAGCAAACCTCTCATaGTGCCTTCCAACGAAGGGATCTTCAGAGCGGTGG +
Preference number: 3 (lower is better)
Translates to: DRPEALAVANLS*CLPTKGSSERW
Trigger: CCACCGCTCTGAAGATCCCTTCGTTGGAAGGCACCATGAGAGGTTTGCTACAGCCAGGGCCTCAGGCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp CCCTCTGGAAACTGCCCTAGCACATCCTCCCTCACCTaGCTCTATGAAGGTGCTCCCACACCCATCTATCTA +
Preference number: 3 (lower is better)
Translates to: PSGNCPSTSSLT*LYEGAPTPIYL
Trigger: TAGATAGATGGGTGTGGGAGCACCTTCATAGAGGCAGGTGAGGGAGGATGTGCTAGGGCAGTTTCCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp TTCAGGGCGACTTTCAGTCTGTTGTGTCAGTTGCCCTaGTTGCTGCATTGCCCCAGGGCTGTCTTTGGACTG +
Preference number: 3 (lower is better)
Translates to: FRATFSLLCQLP*LLHCPRAVFGL
Trigger: CAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAACTGACACAACAGACTGAAAGTCGCCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp GACTCTATCTGGAGTCTGCCTCTTTTGACCCTGCTTTaGTTCAGGTCTCCTGATAGGCCTGAGGCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: DSIWSLPLLTLL*FRSPDRPEALA
Trigger: AGCCAGGGCCTCAGGCCTATCAGGAGACCTGAAGCAAAGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp CAGAGGTTTGGCCAGTTGACACTGTTGCTCCTCACATaGGACTGCAAACACCCACACCTCCTTCAGCCCCTT +
Preference number: 3 (lower is better)
Translates to: QRFGQLTLLLLT*DCKHPHLLQPL
Trigger: AAGGGGCTGAAGGAGGTGTGGGTGTTTGCAGTCCCATGTGAGGAGCAACAGTGTCAACTGGCCAAACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp GTTGCCCTGCTTGCTGCATTGCCCCAGGGCTGTCTTTaGACTGTTGCATTGGTTGCTCAGTTGCCCTGTGTA +
Preference number: 3 (lower is better)
Translates to: VALLAALPQGCL*TVALVAQLPCV
Trigger: TACACAGGGCAACTGAGCAACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp CTGGTCTGGGTGACTCTATCTGGAGTCTGCCTCTTTTaGCCCTGCTTTGCTTCAGGTCTCCTGATAGGCCTG +
Preference number: 3 (lower is better)
Translates to: LVWVTLSGVCLF*PCFASGLLIGL
Trigger: CAGGCCTATCAGGAGACCTGAAGCAAAGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTCACCCAGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp TGGCCATTCCCAGTCTTGAGAAGGCTGAACAGACCTTaGGTCCTTGCCACCATGGGCCTTATCAGCCTGGAT +
Preference number: 3 (lower is better)
Translates to: WPFPVLRRLNRP*VLATMGLISLD
Trigger: ATCCAGGCTGATAAGGCCCATGGTGGCAAGGACTCAAGGTCTGTTCAGCCTTCTCAAGACTGGGAATGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp GACCTTGAGTCCTTGCCACCATGGGCCTTATCAGCCTaGATAGAGTCATCTGCCCTGGCTGTACATACTGCT +
Preference number: 3 (lower is better)
Translates to: DLESLPPWALSA*IESSALAVHTA
Trigger: AGCAGTATGTACAGCCAGGGCAGATGACTCTATCCAGGCTGATAAGGCCCATGGTGGCAAGGACTCAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp TCCATCAGGGTCCCTGTGCTCAGTCCATTGGTTGGCTaGGAGTATCCATCTCTGTCTTTGTCAGGCTATGGC +
Preference number: 3 (lower is better)
Translates to: SIRVPVLSPLVG*EYPSLSLSGYG
Trigger: GCCATAGCCTGACAAAGACAGAGATGGATACTCTCAGCCAACCAATGGACTGAGCACAGGGACCCTGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 72 bp AATGTTGTCTCCTTTCCAGGTCTCCCCTCTGGAAACTaGCCTAGCACATCCTCCCTCACCTGCCTCTATGAA +
Preference number: 3 (lower is better)
Translates to: NVVSFPGLPSGN*PSTSSLTCLYE
Trigger: TTCATAGAGGCAGGTGAGGGAGGATGTGCTAGGGCAGTTTCCAGAGGGGAGACCTGGAAAGGAGACAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp GTGATGCCTTCAGGCTGTGGTGTCAGTTGCACTGTTTaGAGTGGATCTCTTGGGATGTCTCAGAGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: VMPSGCGVSCTV*SGSLGMSQSVV
Trigger: CACCACACTCTGAGACATCCCAAGAGATCCACTGCAAACAGTGCAACTGACACCACAGCCTGAAGGCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp GCTTGCTGCATTGCCCCAGGGCTGTCTTTGGACTGTTaGATTGGTTGCTCAGTTGCCCTGTGTACAGTAGAT +
Preference number: 3 (lower is better)
Translates to: ACCIAPGLSLDC*IGCSVALCTVD
Trigger: ATCTACTGTACACAGGGCAACTGAGCAACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp TTCAGTCTGTTGTGTCAGTTGCCCTGCTTGCTGCATTaGCCCAGGGCTGTCTTTGGACTGTTGCATTGGTTG +
Preference number: 3 (lower is better)
Translates to: FSLLCQLPCLLH*PRAVFGLLHWL
Trigger: CAACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAACTGACACAACAGACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp GGGATCTTCAGAGCGGTGGAGAAGCTGCTGATCTGTTaGTCTGGCTACAGTAGATCTCCTAGGAGGCCTTTA +
Preference number: 3 (lower is better)
Translates to: GIFRAVEKLLIC*SGYSRSPRRPL
Trigger: TAAAGGCCTCCTAGGAGATCTACTGTAGCCAGAGCAACAGATCAGCAGCTTCTCCACCGCTCTGAAGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp GTAACAGGGCCTGTCTGTGGAATCCATTCCCCTAACTaGGCTGTCTTGTCTGGCCTTACTGGGAGAGGATTT +
Preference number: 3 (lower is better)
Translates to: VTGPVCGIHSPN*AVLSGLTGRGF
Trigger: AAATCCTCTCCCAGTAAGGCCAGACAAGACAGCCCAGTTAGGGGAATGGATTCCACAGACAGGCCCTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp TTGTTGGTGGTCCAGTCCCCAGTTATTCCAGAGGTTTaGCCAGTTGACACTGTTGCTCCTCACATGGGACTG +
Preference number: 3 (lower is better)
Translates to: LLVVQSPVIPEV*PVDTVAPHMGL
Trigger: CAGTCCCATGTGAGGAGCAACAGTGTCAACTGGCCAAACCTCTGGAATAACTGGGGACTGGACCACCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp CTGTGGTGTCAGTTGCACTGTTTGCAGTGGATCTCTTaGGATGTCTCAGAGTGTGGTGTCAGATGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: LWCQLHCLQWIS*DVSECGVRCPE
Trigger: CTCAGGGCATCTGACACCACACTCTGAGACATCCCAAGAGATCCACTGCAAACAGTGCAACTGACACCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp GCCTTCAGGCTGTGGTGTCAGTTGCACTGTTTGCAGTaGATCTCTTGGGATGTCTCAGAGTGTGGTGTCAGA +
Preference number: 3 (lower is better)
Translates to: AFRLWCQLHCLQ*ISWDVSECGVR
Trigger: TCTGACACCACACTCTGAGACATCCCAAGAGATCCACTGCAAACAGTGCAACTGACACCACAGCCTGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp GGTTGCTCAGTTGCCCTGTGTACAGTAGATCTCCTGTaGTGCCTTCAGGCTGTGGTGTCAGTTGCACTGTTT +
Preference number: 3 (lower is better)
Translates to: GCSVALCTVDLL*CLQAVVSVALF
Trigger: AAACAGTGCAACTGACACCACAGCCTGAAGGCATCACAGGAGATCTACTGTACACAGGGCAACTGAGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp CTGGGCTGTCTTGTCTGGCCTTACTGGGAGAGGATTTaGCTAGCCTTGTGGAGACTTAACATACCACGGTAT +
Preference number: 3 (lower is better)
Translates to: LGCLVWPYWERI*LALWRLNIPRY
Trigger: ATACCGTGGTATGTTAAGTCTCCACAAGGCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAGACAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp GTTTCTCCTATAGGGTTGCAGACCCCTTTAGTTCCTTaGGTACTTTCTCTACCTCCTTCATTGGGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: VSPIGLQTPLVP*VLSLPPSLGAL
Trigger: CAGGGCCCCCAATGAAGGAGGTAGAGAAAGTACCCAAGGAACTAAAGGGGTCTGCAACCCTATAGGAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CAA 90 bp TGTGAGCATCCACTTTTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGTTATGCATGGTGGCATCATaGAGCCATCCCTTCGTCAGC +
Preference number: 3 (lower is better)
Translates to: CEHPLLYLPGTGIASQELCMVAS*SHPFVS
Trigger: GCTGACGAAGGGATGGCTCAATGATGCCACCATGCA...TAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp GGTGGGGCACTCTCTGGATGGCCTTTCCTCAATCTCTaGTCTACACTTTGTCTGTGTATTTCCTCTTGTGAG +
Preference number: 3 (lower is better)
Translates to: GGALSGWPFLNL*STLCLCISSCE
Trigger: CTCACAAGAGGAAATACACAGACAAAGTGTAGAGCAGAGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 72 bp AGGGCTGTCTTTGGACTGTTGCATTGGTTGCTCAGTTaGCCTGTGTACAGTAGATCTCCTGTGATGCCTTCA +
Preference number: 3 (lower is better)
Translates to: RAVFGLLHWLLS*PVYSRSPVMPS
Trigger: TGAAGGCATCACAGGAGATCTACTGTACACAGGGCAACTGAGCAACCAATGCAACAGTCCAAAGACAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp CTAACGCCACAGAAAGATGGACATAGTCATCTAACCTaGACCCTATGGGGCAATCAGACACAGACCCACCAA +
Preference number: 3 (lower is better)
Translates to: LTPQKDGHSHLT*TLWGNQTQTHQ
Trigger: TTGGTGGGTCTGTGTCTGATTGCCCCATAGGGTCCAGGTTAGATGACTATGTCCATCTTTCTGTGGCGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp CTAATTCCTCCATCAGGGTCCCTGTGCTCAGTCCATTaGTTGGCTGAGAGTATCCATCTCTGTCTTTGTCAG +
Preference number: 3 (lower is better)
Translates to: LIPPSGSLCSVH*LAESIHLCLCQ
Trigger: CTGACAAAGACAGAGATGGATACTCTCAGCCAACCAATGGACTGAGCACAGGGACCCTGATGGAGGAATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp ATTCCCCTAACTGGGCTGTCTTGTCTGGCCTTACTGGGAGAGGATTTGCCTAGCCTCTTTACACACATGTaGAACCATCTCACCTTTCCT +
Preference number: 3 (lower is better)
Translates to: IPLTGLSCLALLGEDLPSLFTHM*NHLTFP
Trigger: AGGAAAGGTGAGATGGTTCAACATGTGTGTAAAGAG...GCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAGACAGCCCAGTTAGGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 72 bp TCACTCCTCCCAATGTTGTCCAACAAGGCCATCCTCTaGCACATATTTAGCCAAATACATGGGTCCCTCCAT +
Preference number: 3 (lower is better)
Translates to: SLLPMLSNKAIL*HIFSQIHGSLH
Trigger: ATGGAGGGACCCATGTATTTGGCTAAATATGTGGCAGAGGATGGCCTTGTTGGACAACATTGGGAGGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp GTCTGGCCTTACTGGGAGAGGATTTGCCTAGCCTTGTaGAGACTTAACATACCACGGTATGGGAAACTACAT +
Preference number: 3 (lower is better)
Translates to: VWPYWERICLAL*RLNIPRYGKLH
Trigger: ATGTAGTTTCCCATACCGTGGTATGTTAAGTCTCCACAAGGCTAGGCAAATCCTCTCCCAGTAAGGCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp GAAATAATGGCTGGGTTTGGTGATTGTATCTCTAGGTaGGGCACTCTCTGGATGGCCTTTCCTCAATCTCTG +
Preference number: 3 (lower is better)
Translates to: EIMAGFGDCISR*GTLWMAFPQSL
Trigger: CAGAGATTGAGGAAAGGCCATCCAGAGAGTGCCCCACCTAGAGATACAATCACCAAACCCAGCCATTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp TTATCTCTGATGTTTGCTGGTCTGGGTGACTCTATCTaGAGTCTGCCTCTTTTGACCCTGCTTTGCTTCAGG +
Preference number: 3 (lower is better)
Translates to: LSLMFAGLGDSI*SLPLLTLLCFR
Trigger: CCTGAAGCAAAGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTCACCCAGACCAGCAAACATCAGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp GACTGGGTGGAGGAGGGCCTCTGTAAGTGGTGGACTTaGAGGAAGATCAGCAATTGGGATGTAAAATTAGTA +
Preference number: 3 (lower is better)
Translates to: DWVEEGLCKWWT*RKISNWDVKLV
Trigger: TACTAATTTTACATCCCAATTGCTGATCTTCCTTCAAGTCCACCACTTACAGAGGCCCTCCTCCACCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp ATCTCTGTCTTTGTCAGGCTATGGCAAAGGCTTTCATaGCACAACCATACCAGGCACGTCATCAAGCACTTC +
Preference number: 3 (lower is better)
Translates to: ISVFVRLWQRLS*HNHTRHVIKHF
Trigger: GAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTTGCCATAGCCTGACAAAGACAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp TGGCCTTGCACTTGCCTCTTACCATATGTTTATCTCTaGTGTTTGCTGGTCTGGGTGACTCTATCTGGAGTC +
Preference number: 3 (lower is better)
Translates to: WPCTCLLPYVYL*CLLVWVTLSGV
Trigger: GACTCCAGATAGAGTCACCCAGACCAGCAAACATCAGAGATAAACATATGGTAAGAGGCAAGTGCAAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp AATACATGGGTCCCTCCATGTGTATTATTTTGTTGGTaGTCCAGTCCCCAGTTATTCCAGAGGTTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: NTWVPPCVLFCW*SSPQLFQRFGQ
Trigger: CTGGCCAAACCTCTGGAATAACTGGGGACTGGACCACCAACAAAATAATACACATGGAGGGACCCATGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATGAATTTGGGAAATTATaGACACCCAAAAGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHEFGKL*TPKRRS
Trigger: GCTCCTCCTTTTGGGTGTCAATAATTTCCCAAATTC...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTGCGACTTTCAGTCTGTaGTGTCAGTTGCCCTGCTTG +
Preference number: 3 (lower is better)
Translates to: QIYWLLLLMALHLPLTICATFSL*CQLPCL
Trigger: CAAGCAGGGCAACTGACACAACAGACTGAAAGTCGC...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp TACCTGTCCTCTGAGAGGCTCCACACAGCAGTTAACTaGAACATATGCAAAGACCCACAGCCAAATATTGGA +
Preference number: 3 (lower is better)
Translates to: YLSSERLHTAVN*NICKDPQPNIG
Trigger: TCCAATATTTGGCTGTGGGTCTTTGCATATGTTTCAGTTAACTGCTGTGTGGAGCCTCTCAGAGGACAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp TACCATATGTTTATCTCTGATGTTTGCTGGTCTGGGTaGCTCTATCTGGAGTCTGCCTCTTTTGACCCTGCT +
Preference number: 3 (lower is better)
Translates to: YHMFISDVCWSG*LYLESASFDPA
Trigger: AGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTCACCCAGACCAGCAAACATCAGAGATAAACATATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp ATAGTAGCCTGGGCTGGCATTTGTGTTCTTAGAGTCTaGATGACCTCTGACATGGATCCTCTGGCTTTTATG +
Preference number: 3 (lower is better)
Translates to: IVAWAGICVLRV*MTSDMDPLAFM
Trigger: CATAAAAGCCAGAGGATCCATGTCAGAGGTCATTCAGACTCTAAGAACACAAATGCCAGCCCAGGCTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp CAGAACTGTAAACTTGCCAGTCTCCTCTCCTTTCCATaGTGGTGTTACATGCCAGAACACAGTACAGAAGAA +
Preference number: 3 (lower is better)
Translates to: QNCKLASLLSFP*WCYMPEHSTEE
Trigger: TTCTTCTGTACTGTGTTCTGGCATGTAACACCACCATGGAAAGGAGAGGAGACTGGCAAGTTTACAGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp CATATGTGTGAACCTGTGCATGCCATAAGGTGCTGGTaGAGGTCAGAGGACAAATTTGTGAAGTTGATTCTC +
Preference number: 3 (lower is better)
Translates to: HMCEPVHAIRCW*RSEDKFVKLIL
Trigger: GAGAATCAACTTCACAAATTTGTCCTCTGACCTTCACCAGCACCTTATGGCATGCACAGGTTCACACATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp AGCTTGTGGACTCTTATGGGGAATTTGGGAAATTATTaGCACCCAAAAGGAGGAGCTAACGCCACAGAAAGA +
Preference number: 3 (lower is better)
Translates to: SLWTLMGNLGNY*HPKGGANATER
Trigger: TCTTTCTGTGGCGTTAGCTCCTCCTTTTGGGTGTCAATAATTTCCCAAATTCCCCATAAGAGTCCACAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp CCACTATTCTCATTCGCTAATACTTACCTGCCACAATaGATTGCATACAACCACCCATTCTGTTCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: PLFSFANTYLPQ*IAYNHPFCSLL
Trigger: GAGCAGGGAACAGAATGGGTGGTTGTATGCAATTCATTGTGGCAGGTAAGTATTAGCGAATGAGAATAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 72 bp AGCTTGAAACCTCAAAACTGCATTCAGAACAGGTCATaGTTATCTCCCAGAACTGTAAACTTGCCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: SLKPQNCIQNRS*LSPRTVNLPVS
Trigger: GGAGACTGGCAAGTTTACAGTTCTGGGAGATAAGCATGACCTGTTCTGAATGCAGTTTTGAGGTTTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp AAGGCAGGGATACAGATGGAGCAGAGACTAAGGGAATaGCCAACCAATAACCCATTCAACTTGAGACTTATT +
Preference number: 3 (lower is better)
Translates to: KAGIQMEQRLRE*PTNNPFNLRLI
Trigger: AATAAGTCTCAAGTTGAATGGGTTATTGGTTGGCCATTCCCTTAGTCTCTGCTCCATCTGTATCCCTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp CACAGCCAAATATTGGACAGAGCTTGTGGACTCTTATaGGGAATTTGGGAAATTATTGACACCCAAAAGGAG +
Preference number: 3 (lower is better)
Translates to: HSQILDRACGLL*GIWEIIDTQKE
Trigger: CTCCTTTTGGGTGTCAATAATTTCCCAAATTCCCCATAAGAGTCCACAAGCTCTGTCCAATATTTGGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp ATTGTTCTATCTACAACAAAGGCAGGGATACAGATGGAGCAGAGACTAAGGGAACTCTTTACACACATGTaGAACCATCTCACCTTTCCT +
Preference number: 3 (lower is better)
Translates to: IVLSTTKAGIQMEQRLRELFTHM*NHLTFP
Trigger: AGGAAAGGTGAGATGGTTCAACATGTGTGTAAAGAG...TTCCCTTAGTCTCTGCTCCATCTGTATCCCTGCCTTTGTTGTAGATAGAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTAACCCACAGCCAAATATaGGACAGAGCTTGTGGACTC +
Preference number: 3 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLTHSQI*DRACGL
Trigger: GAGTCCACAAGCTCTGTCCAATATTTGGCTGTGGGT...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTACCCAGAACTGTAAACTaGCCAGTCTCCTCTCCTTTC +
Preference number: 3 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLPRTVN*PVSSPF
Trigger: GAAAGGAGAGGAGACTGGCAAGTTTACAGTTCTGGG...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp ATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTTTATGTCAGTTGCACTGTTaGCAGTGGATCTCTTGGGAT +
Preference number: 3 (lower is better)
Translates to: IYWLLLLMALHLPLTICLCQLHC*QWISWD
Trigger: ATCCCAAGAGATCCACTGCAAACAGTGCAACTGACA...TAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CAA 90 bp ATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTTTAGAGGCCTTTAGACTGTaGTGTTTTCAGAGGAGCAGT +
Preference number: 3 (lower is better)
Translates to: IYWLLLLMALHLPLTICLEAFRL*CFQRSS
Trigger: ACTGCTCCTCTGAAAACACAACAGTCTAAAGGCCTC...TAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp TGTTATGCTTGTTTTGGTAGGTTGCTTTATGTGCTGTaGTTCTCTCGTATTGGCGTTGTTGTGAGATGCTTG +
Preference number: 3 (lower is better)
Translates to: CYACFGRLLYVL*FSRIGVVVRCL
Trigger: CAAGCATCTCACAACAACGCCAATACGAGAGAATCACAGCACATAAAGCAACCTACCAAAACAAGCATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CCA 72 bp CTGATGATGCCCAAATATATTGGCTTCTGTTGCTTATaGCCTTGCACTTGCCTCTTACCATATGTTTATCTC +
Preference number: 3 (lower is better)
Translates to: LMMPKYIGFCCL*PCTCLLPYVYL
Trigger: GAGATAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTGGGCATCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CAA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTCCTCTTGTGAGTATTTaGTTCTCCCTTCTAAGAAGC +
Preference number: 3 (lower is better)
Translates to: QIYWLLLLMALHLPLTICPLVSI*FSLLRS
Trigger: GCTTCTTAGAAGGGAGAACAAAATACTCACAAGAGG...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR-3UTR CAA 90 bp ATTGTTCTATCTACAACAAAGGCAGGGATACAGATGGAGCAGAGACTAAGGGAAGATAAGGACAGTTGTTaGTCACATGCATTACAAGAA +
Preference number: 3 (lower is better)
Translates to: IVLSTTKAGIQMEQRLREDKDSC*SHALQE
Trigger: TTCTTGTAATGCATGTGACAAACAACTGTCCTTATC...TTCCCTTAGTCTCTGCTCCATCTGTATCCCTGCCTTTGTTGTAGATAGAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp GTGTGCTATTTTGTGACTGGGTTACCTCACTCAGCATaGTATTGTCTACACTTTTATGTCTGTTCTGACTCT +
Preference number: 3 (lower is better)
Translates to: VCYFVTGLPHSA*YCLHFYVCSDS
Trigger: AGAGTCAGAACAGACATAAAAGTGTAGACAATATCATGCTGAGTGAGGTAACCCAGTCACAAAATAGCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp CCTCTGACATGGATCCTCTGGCTTTTATGTCTCTGTTaGGAAATCTGGTATAATTCTGATAGCTCTACCTTT +
Preference number: 3 (lower is better)
Translates to: PLTWILWLLCLC*EIWYNSDSSTF
Trigger: AAAGGTAGAGCTATCAGAATTATACCAGATTTCTCAACAGAGACATAAAAGCCAGAGGATCCATGTCAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp TCTTGTGAGTATTTTGTTCTCCCTTCTAAGAAGCACTaGATCATCTACACTTTGGTCTTCCTTCTTCTTGAG +
Preference number: 3 (lower is better)
Translates to: SCEYFVLPSKKH*IIYTLVFLLLE
Trigger: CTCAAGAAGAAGGAAGACCAAAGTGTAGATGATTCAGTGCTTCTTAGAAGGGAGAACAAAATACTCACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAAAATAACCCATTCAACTaGAGACTTATTCCAGGGGAA +
Preference number: 3 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMENNPFN*RLIPGE
Trigger: TTCCCCTGGAATAAGTCTCAAGTTGAATGGGTTATT...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp TTTCCCTCTATAAATGAAGTGCTGAATATTAAACTTTaGGCCTTGATCAGAACCTCGTCTTGGCTTCATTCT +
Preference number: 3 (lower is better)
Translates to: FPSINEVLNIKL*ALIRTSSWLHS
Trigger: AGAATGAAGCCAAGACGAGGTTCTGATCAAGGCTCAAAGTTTAATATTCAGCACTTCATTTATAGAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR GCA 72 bp CTTAAGATTCTTCACCAGCATTACACTTTGATAATATaGTGCAGAGTAGAGAAGAATTCTCTAGTGCCAGAA +
Preference number: 3 (lower is better)
Translates to: LKILHQHYTLII*CRVEKNSLVPE
Trigger: TTCTGGCACTAGAGAATTCTTCTCTACTCTGCAGCATATTATCAAAGTGTAATGCTGGTGAAGAATCTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp TTCCTGAAGTCGATGGTTCTCAAAGACAAGCGACTTTaGTCACTTTTTGTATTTTATACTATCACCTCATTG +
Preference number: 3 (lower is better)
Translates to: FLKSMVLKDKRL*SLFVFYTITSL
Trigger: CAATGAGGTGATAGTATAAAATACAAAAAGTGACCAAAGTCGCTTGTCTTTGAGAACCATCGACTTCAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAATTACTTGACAGAAGCTaGAAACCTCAAAACTGCATT +
Preference number: 3 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMELLDRS*KPQNCI
Trigger: AATGCAGTTTTGAGGTTTCAAGCTTCTGTCAAGTAA...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR-3UTR CAA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAACCCAGCATTAGAATCTaGTTACCAGACAACATATAT +
Preference number: 3 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMEPSIRI*LPDNIY
Trigger: ATATATGTTGTCTGGTAACAAGATTCTAATGCTGGG...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR TCA 72 bp CTCAGCATGATATTGTCTACACTTTTATGTCTGTTCTaGCTCTGGTTCCTCTGGTACAGATATATATCTTTT +
Preference number: 3 (lower is better)
Translates to: LSMILSTLLCLF*LWFLWYRYISF
Trigger: AAAAGATATATATCTGTACCAGAGGAACCAGAGTCAGAACAGACATAAAAGTGTAGACAATATCATGCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CCA 72 bp CACTGGATTACTGTACTCATCACGCTTAATAACTTTTaGTTGAAAGTCTACTTTATCTCTTTCTCTTCAACG +
Preference number: 3 (lower is better)
Translates to: HWITVLITLNNF*LKVYFISFSST
Trigger: CGTTGAAGAGAAAGAGATAAAGTAGACTTTCAACCAAAAGTTATTAAGCGTGATGAGTACAGTAATCCAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR TCA 72 bp TATATTAAAAGAGCTGCAAGCTCTTTACACACATGTTaGACCATCTCACCTTTCCTTAAGCAATATACTTTG +
Preference number: 3 (lower is better)
Translates to: YIKRAASSLHTC*TISPFLKQYTL
Trigger: CAAAGTATATTGCTTAAGGAAAGGTGAGATGGTTCAACATGTGTGTAAAGAGCTTGCAGCTCTTTTAATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR GCA 72 bp CATTTCTTTCTTTTAACTCTAACTTACTTCCTCCTATaGTCCTACAACATAATGAATTCACTGGCAGAGTAT +
Preference number: 3 (lower is better)
Translates to: HFFLLTLTYFLL*SYNIMNSLAEY
Trigger: ATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAAGTAAGTTAGAGTTAAAAGAAAGAAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp TGCCTTCCAGCCTTGACATTCCCCTACACTGCAGCATaGAACCCCCTCAGGCCCAAGGGTCACTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: CLPALTFPYTAA*NPLRPKGHSSQ
Trigger: TTGGGAGGAGTGACCCTTGGGCCTGAGGGGGTTCAATGCTGCAGTGTAGGGGAATGTCAAGGCTGGAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp AGTTGCCCTGCTTGCTGCATTGCCCCAGGGCTGTCTTaGGACTGTTGCATTGGTTGCTCAGTTGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SCPACCIAPGLS*DCCIGCSVALC
Trigger: ACACAGGGCAACTGAGCAACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp AGGGCGACTTTCAGTCTGTTGTGTCAGTTGCCCTGCTaGCTGCATTGCCCCAGGGCTGTCTTTGGACTGTTG +
Preference number: 4 (lower is better)
Translates to: RATFSLLCQLPC*LHCPRAVFGLL
Trigger: CAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAACTGACACAACAGACTGAAAGTCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp TGTGTGCAGCAGAACTTCAGGGCGACTTTCAGTCTGTaGTGTCAGTTGCCCTGCTTGCTGCATTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CVQQNFRATFSL*CQLPCLLHCPR
Trigger: CCTGGGGCAATGCAGCAAGCAGGGCAACTGACACAACAGACTGAAAGTCGCCCTGAAGTTCTGCTGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp GCTGGTCTGGGTGACTCTATCTGGAGTCTGCCTCTTTaGACCCTGCTTTGCTTCAGGTCTCCTGATAGGCCT +
Preference number: 4 (lower is better)
Translates to: AGLGDSIWSLPL*TLLCFRSPDRP
Trigger: AGGCCTATCAGGAGACCTGAAGCAAAGCAGGGTCAAAAGAGGCAGACTCCAGATAGAGTCACCCAGACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp ATGGCCATTCCCAGTCTTGAGAAGGCTGAACAGACCTaGAGTCCTTGCCACCATGGGCCTTATCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: MAIPSLEKAEQT*SPCHHGPYQPG
Trigger: TCCAGGCTGATAAGGCCCATGGTGGCAAGGACTCAAGGTCTGTTCAGCCTTCTCAAGACTGGGAATGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp GGGGCAATCAGACACAGACCCACCAATGAAAGGGACTaGACCAAGGCCCCTGGCACATATGTAGAAGATGTA +
Preference number: 4 (lower is better)
Translates to: GAIRHRPTNERD*TKAPGTYVEDV
Trigger: TACATCTTCTACATATGTGCCAGGGGCCTTGGTCAAGTCCCTTTCATTGGTGGGTCTGTGTCTGATTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp ATTCCTCCATCAGGGTCCCTGTGCTCAGTCCATTGGTaGGCTGAGAGTATCCATCTCTGTCTTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: IPPSGSLCSVHW*AESIHLCLCQA
Trigger: AGCCTGACAAAGACAGAGATGGATACTCTCAGCCAACCAATGGACTGAGCACAGGGACCCTGATGGAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp TGTGATGCCTTCAGGCTGTGGTGTCAGTTGCACTGTTaGCAGTGGATCTCTTGGGATGTCTCAGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CDAFRLWCQLHC*QWISWDVSECG
Trigger: ACCACACTCTGAGACATCCCAAGAGATCCACTGCAAACAGTGCAACTGACACCACAGCCTGAAGGCATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp TTTCAGTCTGTTGTGTCAGTTGCCCTGCTTGCTGCATaGCCCCAGGGCTGTCTTTGGACTGTTGCATTGGTT +
Preference number: 4 (lower is better)
Translates to: FQSVVSVALLAA*PQGCLWTVALV
Trigger: AACCAATGCAACAGTCCAAAGACAGCCCTGGGGCAATGCAGCAAGCAGGGCAACTGACACAACAGACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp TGTTTCTCCTATAGGGTTGCAGACCCCTTTAGTTCCTaGGGTACTTTCTCTACCTCCTTCATTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CFSYRVADPFSS*GTFSTSFIGGP
Trigger: AGGGCCCCCAATGAAGGAGGTAGAGAAAGTACCCAAGGAACTAAAGGGGTCTGCAACCCTATAGGAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp CTTGTCTGGCCTTACTGGGAGAGGATTTGCCTAGCCTaGTGGAGACTTAACATACCACGGTATGGGAAACTA +
Preference number: 4 (lower is better)
Translates to: LVWPYWERICLA*WRLNIPRYGKL
Trigger: TAGTTTCCCATACCGTGGTATGTTAAGTCTCCACAAGGCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp GGGTTCCATCCAATAGATGACTGTGAGCATCCACTTTaGTATTTGCCAGGCACTGGCATAGCCTCACAAGAG +
Preference number: 4 (lower is better)
Translates to: GFHPIDDCEHPL*YLPGTGIASQE
Trigger: CTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACAGTCATCTATTGGATGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp AGACTAAGGGAATGGCCAACCAATAACCCATTCAACTaGAGACTTATTCCAGGGGAAGCACAAATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLREWPTNNPFN*RLIPGEAQIPG
Trigger: GCCAGGGATTTGTGCTTCCCCTGGAATAAGTCTCAAGTTGAATGGGTTATTGGTTGGCCATTCCCTTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp CAGAACAGGTCATGCTTATCTCCCAGAACTGTAAACTaGCCAGTCTCCTCTCCTTTCCATGGTGGTGTTACA +
Preference number: 4 (lower is better)
Translates to: QNRSCLSPRTVN*PVSSPFHGGVT
Trigger: TGTAACACCACCATGGAAAGGAGAGGAGACTGGCAAGTTTACAGTTCTGGGAGATAAGCATGACCTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp GGTGTCTTCAGGGGAATATACTATCTAGAAGTCTGTTaGGTAGAAAGGACCAGCCATAAGGGGGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: GVFRGIYYLEVC*VERTSHKGVAF
Trigger: GAATGCCACCCCCTTATGGCTGGTCCTTTCTACCAAACAGACTTCTAGATAGTATATTCCCCTGAAGACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
CDS-3UTR CCA 90 bp ATTCCCCTAACTGGGCTGTCTTGTCTGGCCTTACTGGGAGAGGATTTGCCTAGCTGTAGGATATCTTCATaGTGTGCATGTAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: IPLTGLSCLALLGEDLPSCRISS*CACKCS
Trigger: TGAACATTTACATGCACACCATGAAGATATCCTACA...GCTAGGCAAATCCTCTCCCAGTAAGGCCAGACAAGACAGCCCAGTTAGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CCA 90 bp AAAGGCTTTCATGACACAACCATACCAGGCACGTCATCAAGCACTTCCTGGCATAAAATGTTATTTATGTaGGTATCAGAGCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: KGFHDTTIPGTSSSTSWHKMLFM*VSERAT
Trigger: GGTGGCCCGCTCTGATACCCACATAAATAACATTTT...ATGCCAGGAAGTGCTTGATGACGTGCCTGGTATGGTTGTGTCATGAAAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp CATCCAATAGATGACTGTGAGCATCCACTTTTGTATTaGCCAGGCACTGGCATAGCCTCACAAGAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: HPIDDCEHPLLY*PGTGIASQELA
Trigger: AGCTAACTCTTGTGAGGCTATGCCAGTGCCTGGCAAATACAAAAGTGGATGCTCACAGTCATCTATTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp TGGCTGTACATACTGCTCCCATGGAAACTTGTAAGATaGGGCTTCTGTGCTAACCTTGCTTTGCAATGTACT +
Preference number: 4 (lower is better)
Translates to: WLYILLPWKLVR*GFCANLALQCT
Trigger: AGTACATTGCAAAGCAAGGTTAGCACAGAAGCCCAATCTTACAAGTTTCCATGGGAGCAGTATGTACAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
CDS-3UTR CCA 90 bp TCCATGGTGGTGTTACATGCCAGAACACAGTACAGAAGAAACTTATCCTACTCAGGAGGAAATGTACTATaGCTGTATGGTTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SMVVLHARTQYRRNLSYSGGNVL*LYGSLL
Trigger: AAGCAGAGAACCATACAGCCATAGTACATTTCCTCC...TGAGTAGGATAAGTTTCTTCTGTACTGTGTTCTGGCATGTAACACCACCATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CCA 90 bp ATTGTTCTATCTACAACAAAGGCAGGGATACAGATGGAGCAGAGACTAAGGGAAGGAGGAAATGTACTATaGCTGTATGGTTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IVLSTTKAGIQMEQRLREGGNVL*LYGSLL
Trigger: AAGCAGAGAACCATACAGCCATAGTACATTTCCTCC...TTCCCTTAGTCTCTGCTCCATCTGTATCCCTGCCTTTGTTGTAGATAGAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CCA 90 bp TCCATGGTGGTGTTACATGCCAGAACACAGTACAGAAGAAACTTATCCTACTCAAAAATGTTATTTATGTaGGTATCAGAGCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SMVVLHARTQYRRNLSYSKMLFM*VSERAT
Trigger: GGTGGCCCGCTCTGATACCCACATAAATAACATTTT...TGAGTAGGATAAGTTTCTTCTGTACTGTGTTCTGGCATGTAACACCACCATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp GATGCCCAAATATATTGGCTTCTGTTGCTTATGGCCTaGCACTTGCCTCTTACCATATGTTTATCTCTGATG +
Preference number: 4 (lower is better)
Translates to: DAQIYWLLLLMA*HLPLTICLSLM
Trigger: CATCAGAGATAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTGGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp TACTGGGTAGTTCATATTGTTGTTTCTCCTATAGGGTaGCAGACCCCTTTAGTTCCTTGGGTACTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: YWVVHIVVSPIG*QTPLVPWVLSL
Trigger: TAGAGAAAGTACCCAAGGAACTAAAGGGGTCTGCAACCCTATAGGAGAAACAACAATATGAACTACCCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
CDS-3UTR CCA 90 bp ATTGTTCTATCTACAACAAAGGCAGGGATACAGATGGAGCAGAGACTAAGGGAATGTAGGATATCTTCATaGTGTGCATGTAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: IVLSTTKAGIQMEQRLRECRISS*CACKCS
Trigger: TGAACATTTACATGCACACCATGAAGATATCCTACA...TTCCCTTAGTCTCTGCTCCATCTGTATCCCTGCCTTTGTTGTAGATAGAACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CCA 90 bp CCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATGGAATTTCTCTTGGATGAATaGGCTACAGCAGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: PMLLQHNEFTGRVLFLMEFLLDE*ATAELR
Trigger: TCTCAGTTCTGCTGTAGCCCATTCATCCAAGAGAAA...TTCCATAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CCA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTATTTCTCTTGGATGAATaGGCTACAGCAGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLFLLDE*ATAELR
Trigger: TCTCAGTTCTGCTGTAGCCCATTCATCCAAGAGAAA...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTaGCCTCTTACCATATGTTTATCTCTGATGTTTGCT +
Preference number: 4 (lower is better)
Translates to: QIYWLLLLMALH*PLTICLSLMFA
Trigger: AGCAAACATCAGAGATAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp TCTCTATTCCAATTATTCTCGGATTTGGTCTTTTCATaGTGTCCTGCATTTCCTGGATGTTTTGGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: SLFQLFSDLVFS*CPAFPGCFGLG
Trigger: TCCTAACCCAAAACATCCAGGAAATGCAGGACACAATGAAAAGACCAAATCCGAGAATAATTGGAATAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp TCCTTTAACCAGACACCAACCATTCCACAATGTTTTTaGACCAAAAATTGTTCTATCTACAACAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFNQTPTIPQCF*TKNCSIYNKGR
Trigger: CCTGCCTTTGTTGTAGATAGAACAATTTTTGGTCAAAAAACATTGTGGAATGGTTGGTGTCTGGTTAAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CCA 90 bp ATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTTTATTCACAAAAGAAATGTaGGATTTCAGTGCTAGTAGA +
Preference number: 4 (lower is better)
Translates to: IYWLLLLMALHLPLTICLFTKEM*DFSASR
Trigger: TCTACTAGCACTGAAATCCCACATTTCTTTTGTGAA...TAAACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp CTGGACTTTCTTAAGATTCTTCACCAGCATTACACTTaGATAATATGCTGCAGAGTAGAGAAGAATTCTCTA +
Preference number: 4 (lower is better)
Translates to: LDFLKILHQHYT*IICCRVEKNSL
Trigger: TAGAGAATTCTTCTCTACTCTGCAGCATATTATCAAAGTGTAATGCTGGTGAAGAATCTTAAGAAAGTCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp ATTCCTGAAGTCGATGGTTCTCAAAGACAAGCGACTTaGGTCACTTTTTGTATTTTATACTATCACCTCATT +
Preference number: 4 (lower is better)
Translates to: IPEVDGSQRQAT*VTFCILYYHLI
Trigger: AATGAGGTGATAGTATAAAATACAAAAAGTGACCAAAGTCGCTTGTCTTTGAGAACCATCGACTTCAGGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp TCTGACTCTGGTTCCTCTGGTACAGATATATATCTTTaGTGCCTTCTGAAATATTTGTTTCAACCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SDSGSSGTDIYL*CLLKYLFQPSH
Trigger: ATGAGATGGTTGAAACAAATATTTCAGAAGGCACAAAAGATATATATCTGTACCAGAGGAACCAGAGTCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
3UTR CAA 72 bp AATCTTTGTTCTTCTCTATTCCAATTATTCTCGGATTaGGTCTTTTCATTGTGTCCTGCATTTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: NLCSSLFQLFSD*VFSLCPAFPGC
Trigger: ACATCCAGGAAATGCAGGACACAATGAAAAGACCAAATCCGAGAATAATTGGAATAGAGAAGAACAAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
3UTR CAA 72 bp TGGATTACTGTACTCATCACGCTTAATAACTTTTGGTaGAAAGTCTACTTTATCTCTTTCTCTTCAACGAGG +
Preference number: 4 (lower is better)
Translates to: WITVLITLNNFW*KVYFISFSSTR
Trigger: CCTCGTTGAAGAGAAAGAGATAAAGTAGACTTTCAACCAAAAGTTATTAAGCGTGATGAGTACAGTAATCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
CDS CCA 90 bp AGAGCGGGCCACCCTGAGAAGCTCAGTGAGTTCACAAAAGAAATGTaGGATTTCAGTGCTAGTAGAGAAGTTCAGTTGTTTCATCAACAG +
Preference number: 5 (lower is better)
Translates to: RAGHPEKLSEFTKEM*DFSASREVQLFHQQ
Trigger: CTGTTGATGAAACAACTGAACTTCTCTACTAGCACTGAAATCCCACATTTCTTTTGTGAACTCACTGAGCTTCTCAGGGTGGCCCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CAA 90 bp ATACCACGGTATGGGAAACTACATCCCTCAGATGAGAAAAGGAGGGGACTGGGTAGTAGAGAAGTTCAGTaGTTTCATCAACAGCATATG +
Preference number: 5 (lower is better)
Translates to: IPRYGKLHPSDEKRRGLGSREVQ*FHQQHM
Trigger: CATATGCTGTTGATGAAACAACTGAACTTCTCTACT...ACCCAGTCCCCTCCTTTTCTCATCTGAGGGATGTAGTTTCCCATACCGTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CAA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTGTGATTGTGTTTCTCTaGGATGAATGGGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: QIYWLLLLMALHLPLTICVIVFL*DEWATA
Trigger: TGCTGTAGCCCATTCATCCAAGAGAAACACAATCAC...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
CDS-3UTR CAA 90 bp TTCCTCCTATGCTCCTACAACATAATGAATTCACTGGCAGAGTATTGTTTCTTAGTGATTGTGTTTCTCTaGGATGAATGGGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: FLLCSYNIMNSLAEYCFLVIVFL*DEWATA
Trigger: TGCTGTAGCCCATTCATCCAAGAGAAACACAATCAC...TAAGAAACAATACTCTGCCAGTGAATTCATTATGTTGTAGGAGCATAGGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS-3UTR CAA 90 bp CAAATATATTGGCTTCTGTTGCTTATGGCCTTGCACTTGCCTCTTACCATATGTAGTAGAGAAGTTCAGTaGTTTCATCAACAGCATATG +
Preference number: 5 (lower is better)
Translates to: QIYWLLLLMALHLPLTICSREVQ*FHQQHM
Trigger: CATATGCTGTTGATGAAACAACTGAACTTCTCTACT...ACATATGGTAAGAGGCAAGTGCAAGGCCATAAGCAACAGAAGCCAATATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057596.10
CDS CCA 72 bp CACCCTGAGAAGCTCAGTGAGTTCACAAAAGAAATGTaGGATTTCAGTGCTAGTAGAGAAGTTCAGTTGTTT +
Preference number: 6 (lower is better)
Translates to: HPEKLSEFTKEM*DFSASREVQLF
Trigger: AAACAACTGAACTTCTCTACTAGCACTGAAATCCCACATTTCTTTTGTGAACTCACTGAGCTTCTCAGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS CAA 72 bp GAAATGTGGGATTTCAGTGCTAGTAGAGAAGTTCAGTaGTTTCATCAACAGCATATGAATCAAGGAAACCCA +
Preference number: 6 (lower is better)
Translates to: EMWDFSASREVQ*FHQQHMNQGNP
Trigger: TGGGTTTCCTTGATTCATATGCTGTTGATGAAACAACTGAACTTCTCTACTAGCACTGAAATCCCACATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2
CDS TCA 72 bp CTAGTAGAGAAGTTCAGTTGTTTCATCAACAGCATATaGATCAAGGAAACCCAGAACATAATGATCCAAGAT +
Preference number: 6 (lower is better)
Translates to: LVEKFSCFINSI*IKETQNIMIQD
Trigger: ATCTTGGATCATTATGTTCTGGGTTTCCTTGATTCATATGCTGTTGATGAAACAACTGAACTTCTCTACTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057596.10
ENSMUST00000217347.2