Pregenerated sensors for OLFR769 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042801Ensembl transcript IDs: ENSMUST00000050915.5, ENSMUST00000215453.2, ENSMUST00000216906.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATaGGCTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATAT | + |
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Preference number: 1 (lower is better) Translates to: QGAKGICNPIGGTTL*ANQYPGALDSSCIY Trigger: ATATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGCTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 90 bp | ACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTaGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: TLAAYISKDGLVGHH*KERPIGLANFICPS Trigger: ACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 90 bp | CAGAGGATGGAAGACACAGGGAGCATGATGTGGAGAGTTCAAATTTaGACTCACTTTTGGTTAAATGACACCAAGGGAAAGTGCCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: QRMEDTGSMMWRVQI*THFWLNDTKGKCLY Trigger: GTAAAGGCACTTTCCCTTGGTGTCATTTAACCAAAAGTGAGTCCAAATTTGAACTCTCCACATCATGCTCCCTGTGTCTTCCATCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR GCA 90 bp | GTTCAAATTTGGACTCACTTTTGGTTAAATGACACCAAGGGAAAGTaGCTTTACTTCTCTTTCCTTAATGAGTCACCAACTCATTATTGG | + |
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Preference number: 1 (lower is better) Translates to: VQIWTHFWLNDTKGK*LYFSFLNESPTHYW Trigger: CCAATAATGAGTTGGTGACTCATTAAGGAAAGAGAAGTAAAGGCACTTTCCCTTGGTGTCATTTAACCAAAAGTGAGTCCAAATTTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 90 bp | CTCATTATTGGTAATTCAGAGTTAATTGCTAATGCATGTAATCTGTaGACATATCTAAGCAATTACCCTGACCTTGCATCTTTCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LIIGNSELIANACNL*TYLSNYPDLASFFL Trigger: CAGGAAGAAAGATGCAAGGTCAGGGTAATTGCTTAGATATGTCCACAGATTACATGCATTAGCAATTAACTCTGAATTACCAATAATGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 90 bp | AACTACTTTCTGAAAACTACCTTAAAGGTTGAAAGCAACCATTTCTaGATATTGGTTGACAAACCATGTTTGTTTTCTGGGTTGATTGGG | + |
|
Preference number: 1 (lower is better) Translates to: NYFLKTTLKVESNHF*ILVDKPCLFSGLIG Trigger: CCCAATCAACCCAGAAAACAAACATGGTTTGTCAACCAATATCCAGAAATGGTTGCTTTCAACCTTTAAGGTAGTTTTCAGAAAGTAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCATCTAAGCAATTACCCTaGCCTTGCATCTTTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: AHWTCKLYMPQYRGIPGPSKQLP*PCIFLP Trigger: AGGAAGAAAGATGCAAGGTCAGGGTAATTGCTTAGA...TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAAAGACACAGGGAGCATaGTGTGGAGAGTTCAAATTT | + |
|
Preference number: 2 (lower is better) Translates to: AHWTCKLYMPQYRGIPGPKTQGA*CGEFKF Trigger: AAATTTGAACTCTCCACATCATGCTCCCTGTGTCTT...TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAGACACCAAGGGAAAGTaGCTTTACTTCTCTTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: AHWTCKLYMPQYRGIPGPDTKGK*LYFSFL Trigger: AAGGAAAGAGAAGTAAAGGCACTTTCCCTTGGTGTC...TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAACAGGGAGCATGATGTaGAGAGTTCAAATTTGGACT | + |
|
Preference number: 2 (lower is better) Translates to: AHWTCKLYMPQYRGIPGPTGSMM*RVQIWT Trigger: AGTCCAAATTTGAACTCTCCACATCATGCTCCCTGT...TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGGATGTTTCAGAGGATaGACAGCACAGGTGTACACC | + |
|
Preference number: 2 (lower is better) Translates to: LTLAAYISKDGLVGHHWKGCFRG*TAQVYT Trigger: GGTGTACACCTGTGCTGTCCATCCTCTGAAACATCC...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CAA 90 bp | TATTCCCAAGAAGTGAGACATGACTTAGTGAGTGAAACATGGGTATaGAGAGTCCACATCTTGAGAAGGCCATATGACCAGGGACACAAC | + |
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Preference number: 2 (lower is better) Translates to: YSQEVRHDLVSETWV*RVHILRRPYDQGHN Trigger: GTTGTGTCCCTGGTCATATGGCCTTCTCAAGATGTGGACTCTCAATACCCATGTTTCACTCACTAAGTCATGTCTCACTTCTTGGGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAACTTGAGAAGGCCATATaGCCAGGGACACAACTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LTLAAYISKDGLVGHHWKLEKAI*PGTQLL Trigger: TAACAGTTGTGTCCCTGGTCATATGGCCTTCTCAAG...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGGGCAAGAGATTGAAGTATTCCCAAGAAGTGAGACATGACTTAGTGAGTCTTGAGAAGGCCATATaGCCAGGGACACAACTGTTA | + |
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Preference number: 2 (lower is better) Translates to: SQGKRLKYSQEVRHDLVSLEKAI*PGTQLL Trigger: TAACAGTTGTGTCCCTGGTCATATGGCCTTCTCAAG...ACTCACTAAGTCATGTCTCACTTCTTGGGAATACTTCAATCTCTTGCCCTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAATCTCAAACATTGCCTTaGATAGTGGGGCTCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LTLAAYISKDGLVGHHWKSQTLP*IVGLFR Trigger: TCTGAAGAGCCCCACTATGCAAGGCAATGTTTGAGA...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGTGAAATATCAGTACTaGAAGTTGTTGCTGCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LTLAAYISKDGLVGHHWKVKYQY*KLLLLS Trigger: GCTAAGCAGCAACAACTTTCAGTACTGATATTTCAC...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAATCTCAAACATTGCCTTaGATAGTGGGGCTCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TQVTSVCHLLKAANISCKSQTLP*IVGLFR Trigger: TCTGAAGAGCCCCACTATGCAAGGCAATGTTTGAGA...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAATCTAAGCAATTACCCTaGCCTTGCATCTTTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TQVTSVCHLLKAANISCKSKQLP*PCIFLP Trigger: AGGAAGAAAGATGCAAGGTCAGGGTAATTGCTTAGA...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAATCAATAAAGACAGAGTaGAGCCCTCTGTTAGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: TQVTSVCHLLKAANISCKSIKTE*SPLLGT Trigger: TGTTCCTAACAGAGGGCTTCACTCTGTCTTTATTGA...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAAACAGGGAGCATGATGTaGAGAGTTCAAATTTGGACT | + |
|
Preference number: 2 (lower is better) Translates to: TQVTSVCHLLKAANISCKTGSMM*RVQIWT Trigger: AGTCCAAATTTGAACTCTCCACATCATGCTCCCTGT...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAAGTGAAATATCAGTACTaGAAGTTGTTGCTGCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: TQVTSVCHLLKAANISCKVKYQY*KLLLLS Trigger: GCTAAGCAGCAACAACTTTCAGTACTGATATTTCAC...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAATTAGCAGCTGAAAGGTaGGTTGAACTTCAGTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: TQVTSVCHLLKAANISCKLAAER*VELQFF Trigger: AAAGAACTGAAGTTCAACTCACCTTTCAGCTGCTAA...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAATCTCACAGATGCACATaGACTTCTCAGATACTGATA | + |
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Preference number: 2 (lower is better) Translates to: TQVTSVCHLLKAANISCKSHRCT*TSQILI Trigger: TATCAGTATCTGAGAAGTTCATGTGCATCTGTGAGA...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAAAACAAACAGTTCATATaGTGCACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: TQVTSVCHLLKAANISCKNKQFI*CTHTHT Trigger: TGTGTGTGTGTGTGTGCATCATATGAACTGTTTGTT...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATaGCCCAGTACAGGGGAATACCAGGGCCAAAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: WKERPIGLANFI*PSTGEYQGQKG Trigger: CCCTTTTTGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 72 bp | GGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATaGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GALDSSCIYIKR*PSRPSLEREAH Trigger: ATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAAGAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCATTTATATCTCAAACATaGCCTTGCATAGTGGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: AHWTCKLYMPQYRGIPGPFISQT*PCIVGL Trigger: GAGCCCCACTATGCAAGGCAATGTTTGAGATATAAA...TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAGTGGAGAGTTCAAATTaGGACTCACTTTTGGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: AHWTCKLYMPQYRGIPGPVESSN*DSLLVK Trigger: TTTAACCAAAAGTGAGTCCAAATTTGAACTCTCCAC...TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CAA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAAAAATCACAGGTaGTCAAGTCCATGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LTLAAYISKDGLVGHHWKEKNHR*SSPWRG Trigger: TCCCCTCCATGGACTTGACAACCTGTGATTTTTCTC...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCAGGGCAAGAGATTGAAGTATTCCCAAGAAGTGAGACATGACTTAGTGAGTTTGAGAGTCCACATCTaGAGAAGGCCATATGACCAG | + |
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Preference number: 3 (lower is better) Translates to: SQGKRLKYSQEVRHDLVSLRVHI*RRPYDQ Trigger: CTGGTCATATGGCCTTCTCAAGATGTGGACTCTCAA...ACTCACTAAGTCATGTCTCACTTCTTGGGAATACTTCAATCTCTTGCCCTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR TCA 72 bp | CAGCATCCCCATCATGTGTGTTCTGAGACGAACCAGTaGAATATCAGTACTGAAAGTTGTTGCTGCTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: QHPHHVCSETNQ*NISTESCCCLA Trigger: TGCTAAGCAGCAACAACTTTCAGTACTGATATTTCACTGGTTCGTCTCAGAACACACATGATGGGGATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CAA 90 bp | ACACCAAGGGAAAGTGCCTTTACTTCTCTTTCCTTAATGAGTCACCAACTCATTGAGAAAAATCACAGGTaGTCAAGTCCATGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: TPRESAFTSLSLMSHQLIEKNHR*SSPWRG Trigger: TCCCCTCCATGGACTTGACAACCTGTGATTTTTCTC...AATGAGTTGGTGACTCATTAAGGAAAGAGAAGTAAAGGCACTTTCCCTTGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 72 bp | TCCCAAGAAGTGAGACATGACTTAGTGAGTGAAACATaGGTATTGAGAGTCCACATCTTGAGAAGGCCATAT | + |
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Preference number: 3 (lower is better) Translates to: SQEVRHDLVSET*VLRVHILRRPY Trigger: ATATGGCCTTCTCAAGATGTGGACTCTCAATACCCATGTTTCACTCACTAAGTCATGTCTCACTTCTTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 72 bp | GAAGACACAGGGAGCATGATGTGGAGAGTTCAAATTTaGACTCACTTTTGGTTAAATGACACCAAGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: EDTGSMMWRVQI*THFWLNDTKGK Trigger: CTTTCCCTTGGTGTCATTTAACCAAAAGTGAGTCCAAATTTGAACTCTCCACATCATGCTCCCTGTGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR GCA 72 bp | AAAAATCACAGGTTGTCAAGTCCATGGAGGGGATGCTaGTCATGGCGAATTAGACTTAAATTTAAGTCATCC | + |
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Preference number: 3 (lower is better) Translates to: KNHRLSSPWRGC*SWRIRLKFKSS Trigger: GGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCCATGGACTTGACAACCTGTGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 72 bp | AACAGACAGAGGATGGAAGACACAGGGAGCATGATGTaGAGAGTTCAAATTTGGACTCACTTTTGGTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: NRQRMEDTGSMM*RVQIWTHFWLN Trigger: ATTTAACCAAAAGTGAGTCCAAATTTGAACTCTCCACATCATGCTCCCTGTGTCTTCCATCCTCTGTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CAA 90 bp | ACACCAAGGGAAAGTGCCTTTACTTCTCTTTCCTTAATGAGTCACCAACTCATTCAGCTGAAAGGTGAGTaGAACTTCAGTTCTTTGATT | + |
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Preference number: 3 (lower is better) Translates to: TPRESAFTSLSLMSHQLIQLKGE*NFSSLI Trigger: AATCAAAGAACTGAAGTTCAACTCACCTTTCAGCTG...AATGAGTTGGTGACTCATTAAGGAAAGAGAAGTAAAGGCACTTTCCCTTGGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR-3UTR CAA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGTGGAGAGTTCAAATTaGGACTCACTTTTGGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: LTLAAYISKDGLVGHHWKVESSN*DSLLVK Trigger: TTTAACCAAAAGTGAGTCCAAATTTGAACTCTCCAC...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR TCA 72 bp | ACCATCCCCAAAATGCCTGAATTAGCAGCTGAAAGGTaGGTTGAACTTCAGTTCTTTGATTATGGCAACATT | + |
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Preference number: 3 (lower is better) Translates to: TIPKMPELAAER*VELQFFDYGNI Trigger: AATGTTGCCATAATCAAAGAACTGAAGTTCAACTCACCTTTCAGCTGCTAATTCAGGCATTTTGGGGATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CCA 72 bp | CTGAAAACTACCTTAAAGGTTGAAAGCAACCATTTCTaGATATTGGTTGACAAACCATGTTTGTTTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LKTTLKVESNHF*ILVDKPCLFSG Trigger: CCCAGAAAACAAACATGGTTTGTCAACCAATATCCAGAAATGGTTGCTTTCAACCTTTAAGGTAGTTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR TCA 72 bp | TATTGCTTTCTTTGTAGACCACTTTGCACATATCTGTaGTGGTGCAATATTCTGAAAATACCTCTTATATCC | + |
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Preference number: 3 (lower is better) Translates to: YCFLCRPLCTYL*WCNILKIPLIS Trigger: GGATATAAGAGGTATTTTCAGAATATTGCACCATCACAGATATGTGCAAAGTGGTCTACAAAGAAAGCAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCACAGTGTATAGATGAATaGGTTGAGCAAAGGTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHWTCKLYMPQYRGIPGPQCIDE*VEQRCD Trigger: GTCGCACCTTTGCTCAACCCATTCATCTATACACTG...TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAGGGTGTTTTAAGATGTaGATCCAAAAGTGTCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: AHWTCKLYMPQYRGIPGPGCFKM*IQKCQS Trigger: ACTCTGACACTTTTGGATCCACATCTTAAAACACCC...TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | AGTCAGGGCAAGAGATTGAAGTATTCCCAAGAAGTGAGACATGACTTAGTGAGTTCACAGAACTCCAGTTaGAGGCCTAGGCCAAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SQGKRLKYSQEVRHDLVSSQNSS*RPRPRG Trigger: ACCTCTTGGCCTAGGCCTCCAACTGGAGTTCTGTGA...ACTCACTAAGTCATGTCTCACTTCTTGGGAATACTTCAATCTCTTGCCCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAATCACAGAACTCCAGTTaGAGGCCTAGGCCAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLAAYISKDGLVGHHWKSQNSS*RPRPRG Trigger: ACCTCTTGGCCTAGGCCTCCAACTGGAGTTCTGTGA...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | GATAGGAGAAAAATCACAGGTTGTCAAGTCCATGGAGGGGATGCTGCTCATGGCGGGTGTTTTAAGATGTaGATCCAAAAGTGTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRRKITGCQVHGGDAAHGGCFKM*IQKCQS Trigger: ACTCTGACACTTTTGGATCCACATCTTAAAACACCC...GCCATGAGCAGCATCCCCTCCATGGACTTGACAACCTGTGATTTTTCTCCTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAATCACAGAACTCCAGTTaGAGGCCTAGGCCAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGDAAHGELDLNLSHPEKSQNSS*RPRPRG Trigger: ACCTCTTGGCCTAGGCCTCCAACTGGAGTTCTGTGA...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR TCA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGTGCGACTGACGTTGTaGGCACAGATACAACCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLAAYISKDGLVGHHWKVRLTL*AQIQPY Trigger: ATAAGGTTGTATCTGTGCTCACAACGTCAGTCGCAC...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CAA 72 bp | GAAGTGAGACATGACTTAGTGAGTGAAACATGGGTATaGAGAGTCCACATCTTGAGAAGGCCATATGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVRHDLVSETWV*RVHILRRPYDQ Trigger: CTGGTCATATGGCCTTCTCAAGATGTGGACTCTCAATACCCATGTTTCACTCACTAAGTCATGTCTCACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CAA 72 bp | AGCAACCATTTCTGGATATTGGTTGACAAACCATGTTaGTTTTCTGGGTTGATTGGGATGAGCTGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNHFWILVDKPC*FSGLIGMSWSQ Trigger: CTGGCTCCAGCTCATCCCAATCAACCCAGAAAACAAACATGGTTTGTCAACCAATATCCAGAAATGGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR TCA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAAGTGCGACTGACGTTGTaGGCACAGATACAACCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGDAAHGELDLNLSHPEKVRLTL*AQIQPY Trigger: ATAAGGTTGTATCTGTGCTCACAACGTCAGTCGCAC...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAACGGTGTTATCTCCTGTaGCCATCATGTACAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GGDAAHGELDLNLSHPEKRCYLL*PSCTGI Trigger: GATTCCTGTACATGATGGCCACAGGAGATAACACCG...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAACAGTGTATAGATGAATaGGTTGAGCAAAGGTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLAAYISKDGLVGHHWKQCIDE*VEQRCD Trigger: GTCGCACCTTTGCTCAACCCATTCATCTATACACTG...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CAA 72 bp | TTAGTGAGTGAAACATGGGTATTGAGAGTCCACATCTaGAGAAGGCCATATGACCAGGGACACAACTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVSETWVLRVHI*RRPYDQGHNCY Trigger: ATAACAGTTGTGTCCCTGGTCATATGGCCTTCTCAAGATGTGGACTCTCAATACCCATGTTTCACTCACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CAA 72 bp | GAACAACATTATGAGCTAACCAGTACCCCGGAGCTCTaGACTCTAGCTGCATATATATCAAAAGATGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: EQHYELTSTPEL*TLAAYISKDGL Trigger: TAGGCCATCTTTTGATATATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGCTCATAATGTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR TCA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAACACCCCTTCCTTTGCTaGAGGTTTGATGTAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGDAAHGELDLNLSHPEKHPFLC*RFDVDE Trigger: TTCATCTACATCAAACCTTCAGCAAAGGAAGGGGTG...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAACAGTGTATAGATGAATaGGTTGAGCAAAGGTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGDAAHGELDLNLSHPEKQCIDE*VEQRCD Trigger: GTCGCACCTTTGCTCAACCCATTCATCTATACACTG...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CAA 72 bp | TCACAGATGCACATGAACTTCTCAGATACTGATATATaGATGGCACTGGATAAACCATCCCCAAAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQMHMNFSDTDI*MALDKPSPKCL Trigger: CAGGCATTTTGGGGATGGTTTATCCAGTGCCATCAATATATCAGTATCTGAGAAGTTCATGTGCATCTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CAA 72 bp | AAAATACGGCCTTTCTTCTCATACAATGCTTCTGAGTaGGTCAATAAAGACAGAGTGAAGCCCTCTGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIRPFFSYNASE*VNKDRVKPSVR Trigger: CCTAACAGAGGGCTTCACTCTGTCTTTATTGACCAACTCAGAAGCATTGTATGAGAAGAAAGGCCGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAACGGTGTTATCTCCTGTaGCCATCATGTACAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: TQVTSVCHLLKAANISCKRCYLL*PSCTGI Trigger: GATTCCTGTACATGATGGCCACAGGAGATAACACCG...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR TCA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAACACCCCTTCCTTTGCTaGAGGTTTGATGTAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQVTSVCHLLKAANISCKHPFLC*RFDVDE Trigger: TTCATCTACATCAAACCTTCAGCAAAGGAAGGGGTG...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR GCA 90 bp | AGTCAGGGCAAGAGATTGAAGTATTCCCAAGAAGTGAGACATGACTTAGTGAGTGAGGAAAAATTCAGTTaGTCCAAAGAGGACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQGKRLKYSQEVRHDLVSEEKFS*SKEDNK Trigger: TTTGTTGTCCTCTTTGGAGCAACTGAATTTTTCCTC...ACTCACTAAGTCATGTCTCACTTCTTGGGAATACTTCAATCTCTTGCCCTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAAGGGTGTTTTAAGATGTaGATCCAAAAGTGTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGDAAHGELDLNLSHPEKGCFKM*IQKCQS Trigger: ACTCTGACACTTTTGGATCCACATCTTAAAACACCC...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR GCA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAAGAGGAAAAATTCAGTTaGTCCAAAGAGGACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGDAAHGELDLNLSHPEKEEKFS*SKEDNK Trigger: TTTGTTGTCCTCTTTGGAGCAACTGAATTTTTCCTC...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| 3UTR CAA 72 bp | ACTACCTTAAAGGTTGAAAGCAACCATTTCTGGATATaGGTTGACAAACCATGTTTGTTTTCTGGGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TTLKVESNHFWI*VDKPCLFSGLI Trigger: AATCAACCCAGAAAACAAACATGGTTTGTCAACCAATATCCAGAAATGGTTGCTTTCAACCTTTAAGGTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CAA 90 bp | GATAGGAGAAAAATCACAGGTTGTCAAGTCCATGGAGGGGATGCTGCTCATGGCTTAGAACCTGTAGTTTaGGGTCATCTGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DRRKITGCQVHGGDAAHGLEPVV*GHLSAP Trigger: TGGGGCTGACAGATGACCCAAAACTACAGGTTCTAA...GCCATGAGCAGCATCCCCTCCATGGACTTGACAACCTGTGATTTTTCTCCTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CAA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAATTAGAACCTGTAGTTTaGGGTCATCTGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGDAAHGELDLNLSHPEKLEPVV*GHLSAP Trigger: TGGGGCTGACAGATGACCCAAAACTACAGGTTCTAA...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CAA 90 bp | TTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAACGTTTTACAGTGTCTTaGAAGGCCTCTTTCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTLAAYISKDGLVGHHWKRFTVS*KASFTC Trigger: GCAAGTGAAAGAGGCCTTCAAAGACACTGTAAAACG...TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CAA 90 bp | GGAGGGGATGCTGCTCATGGCGAATTAGACTTAAATTTAAGTCATCCTGAAAAACGTTTTACAGTGTCTTaGAAGGCCTCTTTCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGDAAHGELDLNLSHPEKRFTVS*KASFTC Trigger: GCAAGTGAAAGAGGCCTTCAAAGACACTGTAAAACG...TTTTTCAGGATGACTTAAATTTAAGTCTAATTCGCCATGAGCAGCATCCCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS-3UTR CAA 90 bp | ACTCAGGTAACATCCGTATGTCATTTGCTGAAAGCAGCAAACATAAGTTGTAAATTAGAACCTGTAGTTTaGGGTCATCTGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQVTSVCHLLKAANISCKLEPVV*GHLSAP Trigger: TGGGGCTGACAGATGACCCAAAACTACAGGTTCTAA...TTTACAACTTATGTTTGCTGCTTTCAGCAAATGACATACGGATGTTACCTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS CAA 72 bp | GGTGCGACTGACGTTGTGAGCACAGATACAACCTTATaGATAGCCACCCCTTCCTTTGCTGAAGGTTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GATDVVSTDTTL*IATPSFAEGLM Trigger: CATCAAACCTTCAGCAAAGGAAGGGGTGGCTATCAATAAGGTTGTATCTGTGCTCACAACGTCAGTCGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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| CDS TCA 72 bp | CAGTGTATAGATGAATGGGTTGAGCAAAGGTGCGACTaGCGTTGTGAGCACAGATACAACCTTATTGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: QCIDEWVEQRCD*RCEHRYNLIDS Trigger: GCTATCAATAAGGTTGTATCTGTGCTCACAACGTCAGTCGCACCTTTGCTCAACCCATTCATCTATACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050915.5 ENSMUST00000215453.2 ENSMUST00000216906.2 |
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