Pregenerated sensors for OLFR743 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094285Ensembl transcript IDs: ENSMUST00000071294.3, ENSMUST00000215793.2
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 72 bp | ACACATTTACCTTACTACATTATCAAACACAAATGTTaGGTACCTATTCAACAGCATCAGCTGCAAACACTA | + |
Preference number: 3 (lower is better) Translates to: THLPYYIIKHKC*VPIQQHQLQTL Trigger: TAGTGTTTGCAGCTGATGCTGTTGAATAGGTACTCAACATTTGTGTTTGATAATGTAGTAAGGTAAATGTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215793.2 |
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3UTR CAA 72 bp | GACACATTTACCTTACTACATTATCAAACACAAATGTaGAGTACCTATTCAACAGCATCAGCTGCAAACACT | + |
Preference number: 4 (lower is better) Translates to: DTFTLLHYQTQM*STYSTASAANT Trigger: AGTGTTTGCAGCTGATGCTGTTGAATAGGTACTCAACATTTGTGTTTGATAATGTAGTAAGGTAAATGTGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215793.2 |
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CDS CCA 90 bp | AACCAGGAGAATAGACATTATAATTGTCCAGAAAACCTCCATCAATaGGGCTCTGGAACAGGCAAGGGCCAAAAGAGGACCTGGGTCACA | + |
Preference number: 5 (lower is better) Translates to: NQENRHYNCPENLHQ*GSGTGKGQKRTWVT Trigger: TGTGACCCAGGTCCTCTTTTGGCCCTTGCCTGTTCCAGAGCCCCATTGATGGAGGTTTTCTGGACAATTATAATGTCTATTCTCCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071294.3 ENSMUST00000215793.2 |
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CDS CCA 72 bp | TGGGGCTCTGGAACAGGCAAGGGCCAAAAGAGGACCTaGGTCACACAGGAAGTGGTCTATAATTCTGGACCC | + |
Preference number: 6 (lower is better) Translates to: WGSGTGKGQKRT*VTQEVVYNSGP Trigger: GGGTCCAGAATTATAGACCACTTCCTGTGTGACCCAGGTCCTCTTTTGGCCCTTGCCTGTTCCAGAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071294.3 ENSMUST00000215793.2 |
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CDS CCA 72 bp | AATAGACATTATAATTGTCCAGAAAACCTCCATCAATaGGGCTCTGGAACAGGCAAGGGCCAAAAGAGGACC | + |
Preference number: 6 (lower is better) Translates to: NRHYNCPENLHQ*GSGTGKGQKRT Trigger: GGTCCTCTTTTGGCCCTTGCCTGTTCCAGAGCCCCATTGATGGAGGTTTTCTGGACAATTATAATGTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071294.3 ENSMUST00000215793.2 |