Pregenerated sensors for OLFR74 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075142

Ensembl transcript IDs: ENSMUST00000099840.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AATGTGCTGACAGCATTAAATGTGGCAAAGACAAACAGCAGTAATTaGCTGATGAGAGTATCAGAGGAAGAAAGGGCTAGCAGTGAAGAG	+
Preference number: 5 (lower is better) Translates to: NVLTALNVAKTNSSN*LMRVSEEERASSEE Trigger: CTCTTCACTGCTAGCCCTTTCTTCCTCTGATACTCTCATCAGTCAATTACTGCTGTTTGTCTTTGCCACATTTAATGCTGTCAGCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099840.2
CDS GCA 72 bp	AGAACACGTCAGTGTCAAGGAACATGTGAACCCCCATaGGTAGGATCCCACCACCAGTGTGATACAGAGTTT	+
Preference number: 6 (lower is better) Translates to: RTRQCQGTCEPP*VGSHHQCDTEF Trigger: AAACTCTGTATCACACTGGTGGTGGGATCCTACGCATGGGGGTTCACATGTTCCTTGACACTGACGTGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099840.2
CDS TCA 72 bp	ACAGCATTAAATGTGGCAAAGACAAACAGCAGTAATTaGCTGATGAGAGTATCAGAGGAAGAAAGGGCTAGC	+
Preference number: 6 (lower is better) Translates to: TALNVAKTNSSN*LMRVSEEERAS Trigger: GCTAGCCCTTTCTTCCTCTGATACTCTCATCAGTCAATTACTGCTGTTTGTCTTTGCCACATTTAATGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099840.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu