Pregenerated sensors for OLFR735 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046210Ensembl transcript IDs: ENSMUST00000049729.4, ENSMUST00000216634.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTACCCGGGAGCTCTTGTCTTTTGCTGCATATGTATCAAAAGATaGCCTAGTAGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGC | + |
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Preference number: 1 (lower is better) Translates to: QYPGALVFCCICIKR*PSRPSLQREAHWTC Trigger: GCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCTACTAGGTCATCTTTTGATACATATGCAGCAAAAGACAAGAGCTCCCGGGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR GCA 90 bp | AACTGGGTCCACAAGATGGCTGAGTGGGTGGGAAAAGATACCAACTaGACAAGACAGATGAGCTTAGTACAGTCTCCAGGACTCAATATG | + |
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Preference number: 1 (lower is better) Translates to: NWVHKMAEWVGKDTN*TRQMSLVQSPGLNM Trigger: CATATTGAGTCCTGGAGACTGTACTAAGCTCATCTGTCTTGTGCAGTTGGTATCTTTTCCCACCCACTCAGCCATCTTGTGGACCCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR TCA 90 bp | CTTCCAGACCTCACAACACAGTTCACGATTCACCTTGAGATCACTTaGGACTTAAAATGGCTTAGTTTGTCTGTTGAAACTTTTGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: LPDLTTQFTIHLEIT*DLKWLSLSVETFAF Trigger: AAAGGCAAAAGTTTCAACAGACAAACTAAGCCATTTTAAGTCTCAAGTGATCTCAAGGTGAATCGTGAACTGTGTTGTGAGGTCTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR TCA 90 bp | TGCTGGAGACAGAAGTGTAGAGAATTAATCTTTCTAGGTATTCTCTaGCCCTGTCATGAAATTAATGCACATCCTTTGTCAGCCAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: CWRQKCRELIFLGIL*PCHEINAHPLSASK Trigger: TTTACTGGCTGACAAAGGATGTGCATTAATTTCATGACAGGGTCAGAGAATACCTAGAAAGATTAATTCTCTACACTTCTGTCTCCAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR GCA 90 bp | ACTATGTCCCACAACTACTATTGCATGCACTGTTTTATAATTTTATaGCGTCTTCTCTTTGATACCAAGTCTCTAAAGTGGCTTTCACAT | + |
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Preference number: 1 (lower is better) Translates to: TMSHNYYCMHCFIIL*RLLFDTKSLKWLSH Trigger: ATGTGAAAGCCACTTTAGAGACTTGGTATCAAAGAGAAGACGGCATAAAATTATAAAACAGTGCATGCAATAGTAGTTGTGGGACATAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR GCA 90 bp | TGGCTTAGTTTGTCTGTTGAAACTTTTGCCTTTAAAGATACAACTTaGCAAACGAATGAAATTCAAGAAGAACGAAGACCAAAGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: WLSLSVETFAFKDTT*QTNEIQEERRPKCG Trigger: TCCACACTTTGGTCTTCGTTCTTCTTGAATTTCATTCGTTTGGCAAGTTGTATCTTTAAAGGCAAAAGTTTCAACAGACAAACTAAGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAGGCTCTACCGTAGAGAAAGGAAAGCTAGTACCTCCCACCATCCAAGCAGTTTTCAGGCTTTGCTaGAGAGTGGAGAAAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: KEGSTVEKGKLVPPTIQAVFRLC*RVEKRS Trigger: GCTCCTTTTCTCCACTCTCCAGCAAAGCCTGAAAAC...TGCTTGGATGGTGGGAGGTACTAGCTTTCCTTTCTCTACGGTAGAGCCTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGAAGGCTCTACCGTAGAGAAAGGAAAGCTAGTACCTCCCACCATCCAAGCAAAGGTTTTCAGGCTTTaGTGGAGAGTGGAGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KEGSTVEKGKLVPPTIQAKVFRL*WRVEKR Trigger: CCTTTTCTCCACTCTCCAGCAAAGCCTGAAAACCTT...TGCTTGGATGGTGGGAGGTACTAGCTTTCCTTTCTCTACGGTAGAGCCTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGAAGGCTCTACCGTAGAGAAAGGAAAGCTAGTACCTCCCACCATCCAAGCAATGCCGTCTTCTCTTTaGTACCAAGTCTCTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KEGSTVEKGKLVPPTIQAMPSSL*YQVSKV Trigger: CACTTTAGAGACTTGGTATCAAAGAGAAGACGGCAT...TGCTTGGATGGTGGGAGGTACTAGCTTTCCTTTCTCTACGGTAGAGCCTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGACGGACCATCTAGTGATTaGCATATGCAGGGATCCATC | + |
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Preference number: 2 (lower is better) Translates to: WEQNTHRRSYRDKIWSCDGPSSD*HMQGSI Trigger: GATGGATCCCTGCATATGGCAATCACTAGATGGTCC...GTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCTATGGGTGTTTTGTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCACCATCCAAGCATTCCTACCTACACACATGTAAACATTTATCAGATTGATGGCTTTGCTGGAGAGTaGAGAAAAGGAGCTAGCACT | + |
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Preference number: 2 (lower is better) Translates to: SHHPSIPTYTHVNIYQIDGFAGE*RKGAST Trigger: AGTGCTAGCTCCTTTTCTCCACTCTCCAGCAAAGCC...ATCAATCTGATAAATGTTTACATGTGTGTAGGTAGGAATGCTTGGATGGTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTATCAAAAGATGACCTAGTAGGCCATCACTGCAAAGAGAGGCCCATTGGAGGTATGGGCGACCTTTaGGATAGCATTGAAAATGTA | + |
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Preference number: 2 (lower is better) Translates to: YVSKDDLVGHHCKERPIGGMGDL*DSIENV Trigger: TACATTTTCAATGCTATCCCAAAGGTCGCCCATACC...TCCAATGGGCCTCTCTTTGCAGTGATGGCCTACTAGGTCATCTTTTGATACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGACACCAAGTCTCTAAAGTaGCTTTCACATATGCATGGA | + |
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Preference number: 2 (lower is better) Translates to: WEQNTHRRSYRDKIWSCDTKSLK*LSHMHG Trigger: TCCATGCATATGTGAAAGCCACTTTAGAGACTTGGT...GTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCTATGGGTGTTTTGTTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGACAACAATATGATTAGCTaGACCACATCAACTTGCACT | + |
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Preference number: 2 (lower is better) Translates to: WEQNTHRRSYRDKIWSCDNNMIS*TTSTCT Trigger: AGTGCAAGTTGATGTGGTTCAGCTAATCATATTGTT...GTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCTATGGGTGTTTTGTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR TCA 90 bp | ACTACAGAAAAGAGAGAAACAACAAACTGTGGGACTTACTCTTTATACAAGGGAAACTTGCACTCCATGTaGAAGAGGATGTTGCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: TTEKRETTNCGTYSLYKGNLHSM*KRMLLL Trigger: TAGAAGCAACATCCTCTTTCACATGGAGTGCAAGTT...TCCCTTGTATAAAGAGTAAGTCCCACAGTTTGTTGTTTCTCTCTTTTCTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR TCA 90 bp | AAATATCACTTGCATTCTAGAAAACCAGGACTTTTCTTCCAGACCTCACAACACCACCTTGAGATCACTTaGGACTTAAAATGGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: KYHLHSRKPGLFFQTSQHHLEIT*DLKWLS Trigger: ACTAAGCCATTTTAAGTCTCAAGTGATCTCAAGGTG...GTGTTGTGAGGTCTGGAAGAAAAGTCCTGGTTTTCTAGAATGCAAGTGATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR TCA 90 bp | ACTACAGAAAAGAGAGAAACAACAAACTGTGGGACTTACTCTTTATACAAGGGAAAAAATAATTCCCTTTaGGCACTGTGCAGTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: TTEKRETTNCGTYSLYKGKNNSL*ALCSGI Trigger: AATCCCACTGCACAGTGCTCAAAGGGAATTATTTTT...TCCCTTGTATAAAGAGTAAGTCCCACAGTTTGTTGTTTCTCTCTTTTCTGTAGT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR TCA 90 bp | AAATATCACTTGCATTCTAGAAAACCAGGACTTTTCTTCCAGACCTCACAACACAACTTGCCAAACGAATaGAATTCAAGAAGAACGAAG | + |
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Preference number: 2 (lower is better) Translates to: KYHLHSRKPGLFFQTSQHNLPNE*NSRRTK Trigger: CTTCGTTCTTCTTGAATTTCATTCGTTTGGCAAGTT...GTGTTGTGAGGTCTGGAAGAAAAGTCCTGGTTTTCTAGAATGCAAGTGATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR GCA 90 bp | AACAACCAAACTTACTTGCCTTTCATTTCCCATGTAATCAACCTTAACTACCTAAATGAAATGAAAACATaGTGGAGACAGAAGTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: NNQTYLPFISHVINLNYLNEMKT*WRQKCR Trigger: TCTACACTTCTGTCTCCAGCATGTTTTCATTTCATT...TAGGTAGTTAAGGTTGATTACATGGGAAATGAAAGGCAAGTAAGTTTGGTTGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR GCA 72 bp | TGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: CKERPIGLANFI*PSTGERQGQKG Trigger: CCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR GCA 72 bp | AGTAGGCCATCACTGCAAAGAGAGGCCCATTGGACTTaGAAACTTTATATGCCCCAGTACAGGGGAACGCCA | + |
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Preference number: 3 (lower is better) Translates to: SRPSLQREAHWT*KLYMPQYRGTP Trigger: TGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR GCA 72 bp | CACAAGATGGCTGAGTGGGTGGGAAAAGATACCAACTaGACAAGACAGATGAGCTTAGTACAGTCTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HKMAEWVGKDTN*TRQMSLVQSPG Trigger: TCCTGGAGACTGTACTAAGCTCATCTGTCTTGTGCAGTTGGTATCTTTTCCCACCCACTCAGCCATCTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR TCA 72 bp | ATTTTGCTGAAAGGACCCAGATATAGCTCTCTCTTGTaGGACTATGCCGGGCCTAGCAAACACAGAAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: ILLKGPRYSSLL*DYAGPSKHRSG Trigger: TCCACTTCTGTGTTTGCTAGGCCCGGCATAGTCTCACAAGAGAGAGCTATATCTGGGTCCTTTCAGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR TCA 72 bp | GGAGCTCTTGTCTTTTGCTGCATATGTATCAAAAGATaGCCTAGTAGGCCATCACTGCAAAGAGAGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GALVFCCICIKR*PSRPSLQREAH Trigger: ATGGGCCTCTCTTTGCAGTGATGGCCTACTAGGTCATCTTTTGATACATATGCAGCAAAAGACAAGAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR GCA 72 bp | GAACTAACTCCTGAGAGTCCACCTATGACCTCAACATaGAAAATGTGGCACATGCGAATCTCCAACAACAAA | + |
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Preference number: 3 (lower is better) Translates to: ELTPESPPMTST*KMWHMRISNNK Trigger: TTTGTTGTTGGAGATTCGCATGTGCCACATTTTGCATGTTGAGGTCATAGGTGGACTCTCAGGAGTTAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGACACTGAGCAAAGCCTTTaGTTAGAGACACACAACCAA | + |
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Preference number: 3 (lower is better) Translates to: WEQNTHRRSYRDKIWSCDTEQSL*LETHNQ Trigger: TTGGTTGTGTGTCTCTAACAAAAGGCTTTGCTCAGT...GTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCTATGGGTGTTTTGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR CCA 72 bp | CAAAACACCCATAGAAGGAGTTACAGAGACAAAATTTaGAGCTGTGACGAAAGGATGGACCATCTAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: QNTHRRSYRDKI*SCDERMDHLVI Trigger: AATCACTAGATGGTCCATCCTTTCGTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCTATGGGTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR GCA 72 bp | CACCCAAGAAAGCCAACTATGTCCCACAACTACTATTaGATGCACTGTTTTATAATTTTATGCCGTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: HPRKPTMSHNYY*MHCFIILCRLL Trigger: GAGAAGACGGCATAAAATTATAAAACAGTGCATGCAATAGTAGTTGTGGGACATAGTTGGCTTTCTTGGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR CAA 90 bp | AAATATCACTTGCATTCTAGAAAACCAGGACTTTTCTTCCAGACCTCACAACACGCATGTGGACAGTTCTaGGTAACAGTATGTTTACTA | + |
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Preference number: 3 (lower is better) Translates to: KYHLHSRKPGLFFQTSQHACGQF*VTVCLL Trigger: TAGTAAACATACTGTTACCAAGAACTGTCCACATGC...GTGTTGTGAGGTCTGGAAGAAAAGTCCTGGTTTTCTAGAATGCAAGTGATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR TCA 72 bp | AGCAGCCTTATACAACGAATATCTACCAAAAATGTATaGATCTGCATGTGGACAGTTCTTGGTAACAGTATG | + |
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Preference number: 3 (lower is better) Translates to: SSLIQRISTKNV*ICMWTVLGNSM Trigger: CATACTGTTACCAAGAACTGTCCACATGCAGATTCATACATTTTTGGTAGATATTCGTTGTATAAGGCTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGATACAACTTGCCAAACGAATGAAATTCAAGAAGAACGAAGACCAAAGTGTGTCCCACAACTACTATaGCATGCACTGTTTTATAAT | + |
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Preference number: 3 (lower is better) Translates to: KDTTCQTNEIQEERRPKCVPQLL*HALFYN Trigger: ATTATAAAACAGTGCATGCAATAGTAGTTGTGGGAC...ACACTTTGGTCTTCGTTCTTCTTGAATTTCATTCGTTTGGCAAGTTGTATCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR GCA 90 bp | TGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGACAGGTGGACAGTGCCTTaGTCTGGCCCCGGTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: WEQNTHRRSYRDKIWSCDRWTVP*SGPGGG Trigger: ACCTCCACCGGGGCCAGAGCAAGGCACTGTCCACCT...GTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCTATGGGTGTTTTGTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR CCA 90 bp | AAAGAAGGCTCTACCGTAGAGAAAGGAAAGCTAGTACCTCCCACCATCCAAGCAAAGAAGAGAAACAACTaGAGCTCCCAGGAAGACGAC | + |
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Preference number: 4 (lower is better) Translates to: KEGSTVEKGKLVPPTIQAKKRNN*SSQEDD Trigger: GTCGTCTTCCTGGGAGCTCCAGTTGTTTCTCTTCTT...TGCTTGGATGGTGGGAGGTACTAGCTTTCCTTTCTCTACGGTAGAGCCTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR TCA 90 bp | AAAGAAGGCTCTACCGTAGAGAAAGGAAAGCTAGTACCTCCCACCATCCAAGCATCAGGCAAAGGTCAATaGAAGACAGATGGCTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: KEGSTVEKGKLVPPTIQASGKGQ*KTDGLE Trigger: TTCTAAGCCATCTGTCTTTCATTGACCTTTGCCTGA...TGCTTGGATGGTGGGAGGTACTAGCTTTCCTTTCTCTACGGTAGAGCCTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR TCA 90 bp | TCCCACCATCCAAGCATTCCTACCTACACACATGTAAACATTTATCAGATTGATTGGCCCCGGTGGAGGTaGGTTCTCAGAGTAATCAAG | + |
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Preference number: 4 (lower is better) Translates to: SHHPSIPTYTHVNIYQIDWPRWR*VLRVIK Trigger: CTTGATTACTCTGAGAACTCACCTCCACCGGGGCCA...ATCAATCTGATAAATGTTTACATGTGTGTAGGTAGGAATGCTTGGATGGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGCTCTACCGTAGAGAAAGGAAAGCTAGTACCTCCCACCATCCAAGCAAGCTTTTCTATGGCTTaGTTCATGTCTGCATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KEGSTVEKGKLVPPTIQASFSMA*FMSAFL Trigger: CAGAAATGCAGACATGAAGCAAGCCATAGAAAAGCT...TGCTTGGATGGTGGGAGGTACTAGCTTTCCTTTCTCTACGGTAGAGCCTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR TCA 90 bp | AACAACCAAACTTACTTGCCTTTCATTTCCCATGTAATCAACCTTAACTACCTACTGGCTCCAAGAAAGTaGAGAAAGAATACCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: NNQTYLPFISHVINLNYLLAPRK*RKNTWA Trigger: GGCCCAGGTATTCTTTCTTCACTTTCTTGGAGCCAG...TAGGTAGTTAAGGTTGATTACATGGGAAATGAAAGGCAAGTAAGTTTGGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR TCA 90 bp | TGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGACAAGGCCTCAAGTAAATaGATACACAGGGTACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: WEQNTHRRSYRDKIWSCDKASSK*IHRVQR Trigger: TCTTTGTACCCTGTGTATTCATTTACTTGAGGCCTT...GTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCTATGGGTGTTTTGTTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR TCA 90 bp | ACTACAGAAAAGAGAGAAACAACAAACTGTGGGACTTACTCTTTATACAAGGGAAAAATAGTACATGGGTaGCTGGAACAGGTGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: TTEKRETTNCGTYSLYKGKIVHG*LEQVSI Trigger: GATGCTCACCTGTTCCAGTCACCCATGTACTATTTT...TCCCTTGTATAAAGAGTAAGTCCCACAGTTTGTTGTTTCTCTCTTTTCTGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR TCA 90 bp | ACTACAGAAAAGAGAGAAACAACAAACTGTGGGACTTACTCTTTATACAAGGGACCACAAAAAGGCAGCTaGATGACAATCATGACCTGT | + |
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Preference number: 4 (lower is better) Translates to: TTEKRETTNCGTYSLYKGPQKGS*MTIMTC Trigger: ACAGGTCATGATTGTCATTCAGCTGCCTTTTTGTGG...TCCCTTGTATAAAGAGTAAGTCCCACAGTTTGTTGTTTCTCTCTTTTCTGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR CAA 72 bp | GAACAACAATATGAACTAACCAGTACCCGGGAGCTCTaGTCTTTTGCTGCATATGTATCAAAAGATGACCTA | + |
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Preference number: 4 (lower is better) Translates to: EQQYELTSTREL*SFAAYVSKDDL Trigger: TAGGTCATCTTTTGATACATATGCAGCAAAAGACAAGAGCTCCCGGGTACTGGTTAGTTCATATTGTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR GCA 90 bp | AACAACCAAACTTACTTGCCTTTCATTTCCCATGTAATCAACCTTAACTACCTACAGTGGGATGCCACTTaGTTCTTTCTCAGCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NNQTYLPFISHVINLNYLQWDAT*FFLSFS Trigger: AGAAAAGCTGAGAAAGAAGCAAGTGGCATCCCACTG...TAGGTAGTTAAGGTTGATTACATGGGAAATGAAAGGCAAGTAAGTTTGGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR CAA 72 bp | ACACCCAAGAAAGCCAACTATGTCCCACAACTACTATaGCATGCACTGTTTTATAATTTTATGCCGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TPKKANYVPQLL*HALFYNFMPSS Trigger: AGAAGACGGCATAAAATTATAAAACAGTGCATGCAATAGTAGTTGTGGGACATAGTTGGCTTTCTTGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR TCA 90 bp | AAAGATACAACTTGCCAAACGAATGAAATTCAAGAAGAACGAAGACCAAAGTGTCAGAAGCACAAATCGTaGCACATCAGAGCTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: KDTTCQTNEIQEERRPKCQKHKS*HIRAVF Trigger: AAAAACAGCTCTGATGTGTCACGATTTGTGCTTCTG...ACACTTTGGTCTTCGTTCTTCTTGAATTTCATTCGTTTGGCAAGTTGTATCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR GCA 90 bp | AACAACCAAACTTACTTGCCTTTCATTTCCCATGTAATCAACCTTAACTACCTAGGCTTGCTTCATGTCTaGATTTCTGAGTGTATAGAT | + |
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Preference number: 4 (lower is better) Translates to: NNQTYLPFISHVINLNYLGLLHV*ISECID Trigger: ATCTATACACTCAGAAATGCAGACATGAAGCAAGCC...TAGGTAGTTAAGGTTGATTACATGGGAAATGAAAGGCAAGTAAGTTTGGTTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR CCA 90 bp | AAAGATACAACTTGCCAAACGAATGAAATTCAAGAAGAACGAAGACCAAAGTGTTTCTCAGCTTTTCTATaGCTTGCTTCATGTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: KDTTCQTNEIQEERRPKCFSAFL*LASCLH Trigger: ATGCAGACATGAAGCAAGCCATAGAAAAGCTGAGAA...ACACTTTGGTCTTCGTTCTTCTTGAATTTCATTCGTTTGGCAAGTTGTATCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| 3UTR CAA 72 bp | TGTGGCACATGCGAATCTCCAACAACAAATAACAGTTaGTACACATACAAACATGCTGAGAATAAATTAGTA | + |
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Preference number: 4 (lower is better) Translates to: CGTCESPTTNNS*YTYKHAENKLV Trigger: TACTAATTTATTCTCAGCATGTTTGTATGTGTACAAACTGTTATTTGTTGTTGGAGATTCGCATGTGCCACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR CAA 90 bp | TCCCACCATCCAAGCATTCCTACCTACACACATGTAAACATTTATCAGATTGATCAGGTGGACAGTGCCTaGCTCTGGCCCCGGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SHHPSIPTYTHVNIYQIDQVDSA*LWPRWR Trigger: CCTCCACCGGGGCCAGAGCAAGGCACTGTCCACCTG...ATCAATCTGATAAATGTTTACATGTGTGTAGGTAGGAATGCTTGGATGGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCTCTACCGTAGAGAAAGGAAAGCTAGTACCTCCCACCATCCAAGCACAGCTTTTCTATGGCTaGCTTCATGTCTGCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: KEGSTVEKGKLVPPTIQAQLFYG*LHVCIS Trigger: AGAAATGCAGACATGAAGCAAGCCATAGAAAAGCTG...TGCTTGGATGGTGGGAGGTACTAGCTTTCCTTTCTCTACGGTAGAGCCTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR CAA 90 bp | AACAACCAAACTTACTTGCCTTTCATTTCCCATGTAATCAACCTTAACTACCTAGCAGTGGGATGCCACTaGCTTCTTTCTCAGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: NNQTYLPFISHVINLNYLAVGCH*LLSQLF Trigger: GAAAAGCTGAGAAAGAAGCAAGTGGCATCCCACTGC...TAGGTAGTTAAGGTTGATTACATGGGAAATGAAAGGCAAGTAAGTTTGGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS-3UTR CAA 90 bp | ACTACAGAAAAGAGAGAAACAACAAACTGTGGGACTTACTCTTTATACAAGGGAACATCAGAGCTGTTTTaGTTTTTCTCCAAGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: TTEKRETTNCGTYSLYKGTSELF*FFSKPR Trigger: TCTTGGCTTGGAGAAAAACAAAAACAGCTCTGATGT...TCCCTTGTATAAAGAGTAAGTCCCACAGTTTGTTGTTTCTCTCTTTTCTGTAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216634.2 |
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| CDS TCA 72 bp | AGCCAAACACCAACCGAAGTCGTAGGTGGTTATTCATaGCCGTCAGGTAGTGCAAAGGGTTGCATATGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SQTPTEVVGGYS*PSGSAKGCIWQ Trigger: TTGCCATATGCAACCCTTTGCACTACCTGACGGTCATGAATAACCACCTACGACTTCGGTTGGTGTTTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049729.4 ENSMUST00000216634.2 |
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