Pregenerated sensors for OLFR734 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045306Ensembl transcript IDs: ENSMUST00000217152.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGGTAAAGGCTTCAGATTTGTCAGCAATACTAGTCAATCTGAGCTaGCTGACACAGGAGTTGAGGTGGCGTATAGAACAGAATCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LVKASDLSAILVNLS*LTQELRWRIEQNLQ Trigger: CTGGAGATTCTGTTCTATACGCCACCTCAACTCCTGTGTCAGGCAGCTCAGATTGACTAGTATTGCTGACAAATCTGAAGCCTTTACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR GCA 90 bp | CCTTCTCCTCAGCTTCTTTCAGCCATCCCTAATTCAACAAGAGCCTaGAGCTTCTATCCATTGGTTGGGTACAAATATCTGCATCTGATT | + |
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Preference number: 1 (lower is better) Translates to: PSPQLLSAIPNSTRA*SFYPLVGYKYLHLI Trigger: AATCAGATGCAGATATTTGTACCCAACCAATGGATAGAAGCTGCAGGCTCTTGTTGAATTAGGGATGGCTGAAAGAAGCTGAGGAGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR TCA 90 bp | CAACATGCATTCTCCTCACAGACCTGCTATGGAATAGATATTCAGTaGACAAGTAGTGAATATGTGTGCTTAAGGAGACAGTTATTAAAT | + |
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Preference number: 1 (lower is better) Translates to: QHAFSSQTCYGIDIQ*TSSEYVCLRRQLLN Trigger: ATTTAATAACTGTCTCCTTAAGCACACATATTCACTACTTGTTCACTGAATATCTATTCCATAGCAGGTCTGTGAGGAGAATGCATGTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR GCA 90 bp | GAAATGGGGAAATCTTATAGCAAACAAAACATATTGTGCTCTGGATaGATAAATACCATTTCCATAGTTGGTAAAGGCTTCAGATTTGTC | + |
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Preference number: 1 (lower is better) Translates to: EMGKSYSKQNILCSG*INTISIVGKGFRFV Trigger: GACAAATCTGAAGCCTTTACCAACTATGGAAATGGTATTTATGCATCCAGAGCACAATATGTTTTGTTTGCTATAAGATTTCCCCATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGGAACCTCCCCTTGAGCTGGATCCCACTTTGGGCCTGTCACTGAACCTTTTAACTCCAGCTCCATaGGATTCAAGGCCACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PWEPPLELDPTLGLSLNLLTPAP*DSRPPS Trigger: AGAAGGTGGCCTTGAATCCCATGGAGCTGGAGTTAA...AAGGTTCAGTGACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTTCCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR TCA 90 bp | AACACCCTACTCTCAGCAATGGACAGATCATGGAAACATAAACTAAACAGAGACTATGGGTCAGAGATGTaGCTGTGGGATGGCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: NTLLSAMDRSWKHKLNRDYGSEM*LWDGNP Trigger: GGGGTTGCCATCCCACAGTCACATCTCTGACCCATA...GTCTCTGTTTAGTTTATGTTTCCATGATCTGTCCATTGCTGAGAGTAGGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTATACTCCAAATGCAAGGGCACCCACATAATAATAGTAGAATCTTCAACATTGGGAACCTCCCCTTaGGCTGGATCCCACTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: HLYSKCKGTHIIIVESSTLGTSP*AGSHFG Trigger: CCCAAAGTGGGATCCAGCTCAAGGGGAGGTTCCCAA...TGTTGAAGATTCTACTATTATTATGTGGGTGCCCTTGCATTTGGAGTATAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGCTCTATAAGTTCCCTTTCCCTACTCTGGGGCATTTTATCTAAGGTCCCTTCCCCAAATTTTACTTaGTTATTTCCTCCACGAGTC | + |
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Preference number: 2 (lower is better) Translates to: VGSISSLSLLWGILSKVPSPNFT*LFPPRV Trigger: GACTCGTGGAGGAAATAATCAAGTAAAATTTGGGGA...AGGGACCTTAGATAAAATGCCCCAGAGTAGGGAAAGGGAACTTATAGAGCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATTGGTTGGGTACAAATATCTGCATCTGATTCTTTCAGCTACTTGTTGGGTCTTTGGGCCTGTCACTaGACCTTATTTTCCTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SIGWVQISASDSFSYLLGLWACH*TLFSSG Trigger: ACCTGAGGAAAATAAGGTTCAGTGACAGGCCCAAAG...ACCCAACAAGTAGCTGAAAGAATCAGATGCAGATATTTGTACCCAACCAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCAGCCATCCCTAATTCAACAAGAGCCTGCAGCTTCTATCCATTGGTTGCTTTCAGCTACTTGTTaGGTTTTCTGGAAGGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: FFQPSLIQQEPAASIHWLLSATC*VFWKVD Trigger: GTCTACCTTCCAGAAAACCCAACAAGTAGCTGAAAG...CAACCAATGGATAGAAGCTGCAGGCTCTTGTTGAATTAGGGATGGCTGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR CAA 90 bp | CTTTCAGCCATCCCTAATTCAACAAGAGCCTGCAGCTTCTATCCATaGGTTGGGTACAAATATCTGCATCTGATTCTTTCAGCTACTTGT | + |
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Preference number: 2 (lower is better) Translates to: LSAIPNSTRACSFYP*VGYKYLHLILSATC Trigger: ACAAGTAGCTGAAAGAATCAGATGCAGATATTTGTACCCAACCAATGGATAGAAGCTGCAGGCTCTTGTTGAATTAGGGATGGCTGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR CAA 90 bp | TGGCGTATAGAACAGAATCTCCAGGTTCTATCAAGTCTGGGAGAGTaGGAAATAAGGGACAAAGAAAACAACTTTTTCCAGGCTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: WRIEQNLQVLSSLGE*EIRDKENNFFQAQK Trigger: TTTCTGAGCCTGGAAAAAGTTGTTTTCTTTGTCCCTTATTTCCAACTCTCCCAGACTTGATAGAACCTGGAGATTCTGTTCTATACGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGTAATTCAGGGAAGCAGGCCACTGTGTCATATTTATGTGGTCATACATTTTACCAGGCTTTCCTCTaGAGGTTATTATGTAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: PSNSGKQATVSYLCGHTFYQAFL*RLLCRL Trigger: TAGCCTACATAATAACCTTCAGAGGAAAGCCTGGTA...AAATGTATGACCACATAAATATGACACAGTGGCCTGCTTCCCTGAATTACTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGTAATTCAGGGAAGCAGGCCACTGTGTCATATTTATGTGGTCATACATTTCAGCATACACATAGTTaGGAACTCCTTTCATGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PSNSGKQATVSYLCGHTFQHTHS*ELLSWR Trigger: TCTCCATGAAAGGAGTTCTCAACTATGTGTATGCTG...AAATGTATGACCACATAAATATGACACAGTGGCCTGCTTCCCTGAATTACTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTATACTCCAAATGCAAGGGCACCCACATAATAATAGTAGAATCTTCAACACCACTCATCTACTGGTaGGAATGGCAAAATGGATCC | + |
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Preference number: 2 (lower is better) Translates to: HLYSKCKGTHIIIVESSTPLIYW*EWQNGS Trigger: GGATCCATTTTGCCATTCTCACCAGTAGATGAGTGG...TGTTGAAGATTCTACTATTATTATGTGGGTGCCCTTGCATTTGGAGTATAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGATTTGTCAGCAATACTAGTCAATCTGAGCTGCCTGACACAGGAGTTGGAGAGAAGTACTCAGTaGTTAAGGATACTTGTTATT | + |
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Preference number: 2 (lower is better) Translates to: ASDLSAILVNLSCLTQELERSTQ*LRILVI Trigger: AATAACAAGTATCCTTAAGCACTGAGTACTTCTCTC...CAACTCCTGTGTCAGGCAGCTCAGATTGACTAGTATTGCTGACAAATCTGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGTAATTCAGGGAAGCAGGCCACTGTGTCATATTTATGTGGTCATACATTTTCTTATTTCACAACATaGATTCTCCTCACAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: PSNSGKQATVSYLCGHTFSYFTT*ILLTDL Trigger: CAGGTCTGTGAGGAGAATGCATGTTGTGAAATAAGA...AAATGTATGACCACATAAATATGACACAGTGGCCTGCTTCCCTGAATTACTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTATACTCCAAATGCAAGGGCACCCACATAATAATAGTAGAATCTTCAACAAGCACTAATGGCATTTaGGGCCAAGTAATTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: HLYSKCKGTHIIIVESSTSTNGI*GQVIQG Trigger: TCCCTGAATTACTTGGCCCCAAATGCCATTAGTGCT...TGTTGAAGATTCTACTATTATTATGTGGGTGCCCTTGCATTTGGAGTATAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR GCA 90 bp | ACCATTTCCATAGTTGGTAAAGGCTTCAGATTTGTCAGCAATACTAGTCAATCTTTCTCCTCACAGACCTaGTATGGAATAGATATTCAG | + |
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Preference number: 2 (lower is better) Translates to: TISIVGKGFRFVSNTSQSFSSQT*YGIDIQ Trigger: CTGAATATCTATTCCATAGCAGGTCTGTGAGGAGAA...AGATTGACTAGTATTGCTGACAAATCTGAAGCCTTTACCAACTATGGAAATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCATTGCATCCCTAGAAAAGAAGTCATGTTGAGCACAGAAGATGAAGGAAGTCTCAGAAAGAAAGTTTaGCAAATACTCCTATTGAAC | + |
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Preference number: 2 (lower is better) Translates to: CHCIPRKEVMLSTEDEGSLRKKV*QILLLN Trigger: GTTCAATAGGAGTATTTGGCAAACTTTCTTTCTGAG...ACTTCCTTCATCTTCTGTGCTCAACATGACTTCTTTTCTAGGGATGCAATGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CCA 90 bp | ACCATTTCCATAGTTGGTAAAGGCTTCAGATTTGTCAGCAATACTAGTCAATCTCTCACAGACCTGCTATaGAATAGATATTCAGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: TISIVGKGFRFVSNTSQSLTDLL*NRYSVN Trigger: GTTCACTGAATATCTATTCCATAGCAGGTCTGTGAG...AGATTGACTAGTATTGCTGACAAATCTGAAGCCTTTACCAACTATGGAAATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CAA 90 bp | TTAACTGAGACTGCTGGTCCTCCTACAGAATTGTCCTTCTCCTCAGCTTCTTTCTGCCTGACACAGGAGTaGAGGTGGCGTATAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: LTETAGPPTELSFSSASFCLTQE*RWRIEQ Trigger: CTGTTCTATACGCCACCTCAACTCCTGTGTCAGGCA...GAAAGAAGCTGAGGAGAAGGACAATTCTGTAGGAGGACCAGCAGTCTCAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR CCA 72 bp | CAGGAACAATTATGGGTCAGAGATGTGACTGTGGGATaGCAACCCCATTCCTCACTTGATGTCTTGTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: QEQLWVRDVTVG*QPHSSLDVLSS Trigger: GGAAGACAAGACATCAAGTGAGGAATGGGGTTGCCATCCCACAGTCACATCTCTGACCCATAATTGTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR GCA 72 bp | GCTTCAGATTTGTCAGCAATACTAGTCAATCTGAGCTaGCTGACACAGGAGTTGAGGTGGCGTATAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: ASDLSAILVNLS*LTQELRWRIEQ Trigger: CTGTTCTATACGCCACCTCAACTCCTGTGTCAGGCAGCTCAGATTGACTAGTATTGCTGACAAATCTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCAGCCATCCCTAATTCAACAAGAGCCTGCAGCTTCTATCCATTGGTTGCTAAGGTCCCTCCCTTaGAGTCCTGAGAGTCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: FFQPSLIQQEPAASIHWLLRSLP*SPESLL Trigger: TAAAAGACTCTCAGGACTCAAAGGGAGGGACCTTAG...CAACCAATGGATAGAAGCTGCAGGCTCTTGTTGAATTAGGGATGGCTGAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGCTCTATAAGTTCCCTTTCCCTACTCTGGGGCATTTTATCTAAGGTCCCTCCAATAACAGGCTGCTaGACATTTCACAGTGAATTT | + |
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Preference number: 3 (lower is better) Translates to: VGSISSLSLLWGILSKVPPITGC*TFHSEF Trigger: AAATTCACTGTGAAATGTCAAGCAGCCTGTTATTGG...AGGGACCTTAGATAAAATGCCCCAGAGTAGGGAAAGGGAACTTATAGAGCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR TCA 72 bp | TACTTGATTATTTCCTCCACGAGTCAGGATAGGTCATaGCTCAGTAGCTTGTCAAAGAATACCCCTCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: YLIISSTSQDRS*LSSLSKNTPPC Trigger: ACAGGGAGGGGTATTCTTTGACAAGCTACTGAGTCATGACCTATCCTGACTCGTGGAGGAAATAATCAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR TCA 72 bp | GTTTTCTGGAAGGTAGACATGATAGATCCCTTTTTGTaGGCACTCCATAGCCTCAGTAATACTGTCAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VFWKVDMIDPFL*ALHSLSNTVRP Trigger: AGGCCTGACAGTATTACTGAGGCTATGGAGTGCTCACAAAAAGGGATCTATCATGTCTACCTTCCAGAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR GCA 72 bp | CAGCTTCTTTCAGCCATCCCTAATTCAACAAGAGCCTaGAGCTTCTATCCATTGGTTGGGTACAAATATCTG | + |
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Preference number: 3 (lower is better) Translates to: QLLSAIPNSTRA*SFYPLVGYKYL Trigger: CAGATATTTGTACCCAACCAATGGATAGAAGCTGCAGGCTCTTGTTGAATTAGGGATGGCTGAAAGAAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTTGAATTTAAAGCATGCAGATACATGTCTGCTGATCCCTGTCAGCACAGAGTCAAGTCTGGGAGAGTaGGAAATAAGGGACAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: GLNLKHADTCLLIPVSTESSLGE*EIRDKE Trigger: TTCTTTGTCCCTTATTTCCAACTCTCCCAGACTTGA...CTCTGTGCTGACAGGGATCAGCAGACATGTATCTGCATGCTTTAAATTCAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR TCA 72 bp | ACACACATACACATGAAAGCTGAACAACAGATTAACTaGGACTGCTGGTCCTCCTACAGAATTGTCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: THIHMKAEQQIN*DCWSSYRIVLL Trigger: GAGAAGGACAATTCTGTAGGAGGACCAGCAGTCTCAGTTAATCTGTTGTTCAGCTTTCATGTGTATGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR GCA 72 bp | AATGGCAAAGGAGATAGAAGGTTTGAATTTAAAGCATaGAGATACATGTCTGCTGATCCCTGTCAGCACAGA | + |
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Preference number: 3 (lower is better) Translates to: NGKGDRRFEFKA*RYMSADPCQHR Trigger: TCTGTGCTGACAGGGATCAGCAGACATGTATCTGCATGCTTTAAATTCAAACCTTCTATCTCCTTTGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR TCA 72 bp | TTCTCCTCACAGACCTGCTATGGAATAGATATTCAGTaGACAAGTAGTGAATATGTGTGCTTAAGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: FSSQTCYGIDIQ*TSSEYVCLRRQ Trigger: CTGTCTCCTTAAGCACACATATTCACTACTTGTTCACTGAATATCTATTCCATAGCAGGTCTGTGAGGAGAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR TCA 72 bp | TGGTCACAAAATAGGCTTCAACAGATACAAGAAGCATaGAATAATCCCATGCACCCTATCAGATCATCATGG | + |
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Preference number: 3 (lower is better) Translates to: WSQNRLQQIQEA*NNPMHPIRSSW Trigger: CCATGATGATCTGATAGGGTGCATGGGATTATTTCATGCTTCTTGTATCTGTTGAAGCCTATTTTGTGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR GCA 72 bp | TCAATATTCAGGAATCAGAAGTGTAGTCTGTGTCATTaGATCCCTAGAAAAGAAGTCATGTTGAGCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: SIFRNQKCSLCH*IPRKEVMLSTE Trigger: TTCTGTGCTCAACATGACTTCTTTTCTAGGGATGCAATGACACAGACTACACTTCTGATTCCTGAATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR CCA 72 bp | TACAAATATCTGCATCTGATTCTTTCAGCTACTTGTTaGGTTTTCTGGAAGGTAGACATGATAGATCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: YKYLHLILSATC*VFWKVDMIDPF Trigger: AAAGGGATCTATCATGTCTACCTTCCAGAAAACCCAACAAGTAGCTGAAAGAATCAGATGCAGATATTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR-3UTR CAA 90 bp | ACCATTTCCATAGTTGGTAAAGGCTTCAGATTTGTCAGCAATACTAGTCAATCTGCTCAGAAAGAAAGTTaGCCAAATACTCCTATTGAA | + |
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Preference number: 3 (lower is better) Translates to: TISIVGKGFRFVSNTSQSAQKES*PNTPIE Trigger: TTCAATAGGAGTATTTGGCAAACTTTCTTTCTGAGC...AGATTGACTAGTATTGCTGACAAATCTGAAGCCTTTACCAACTATGGAAATGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR TCA 72 bp | CCAGGCTCAGAAAGAAAGTTTGCCAAATACTCCTATTaGACGAAAAATGAAACACACCAATACTTAATTTGG | + |
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Preference number: 3 (lower is better) Translates to: PGSERKFAKYSY*TKNETHQYLIW Trigger: CCAAATTAAGTATTGGTGTGTTTCATTTTTCGTTCAATAGGAGTATTTGGCAAACTTTCTTTCTGAGCCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR TCA 72 bp | ACATTTCATATTGGTCAAAGGAAAAATCTACCAAGATaGACTCTCAGTTCTGAACATCTATACTCCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: TFHIGQRKNLPR*TLSSEHLYSKC Trigger: GCATTTGGAGTATAGATGTTCAGAACTGAGAGTTCATCTTGGTAGATTTTTCCTTTGACCAATATGAAATGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR CAA 72 bp | AGGCCTTGGGAACCTCCCCTTGAGCTGGATCCCACTTaGGGCCTGTCACTGAACCTTATTTTCCTCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RPWEPPLELDPT*GLSLNLIFLRF Trigger: GAACCTGAGGAAAATAAGGTTCAGTGACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTTCCCAAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| CDS-3UTR TCA 90 bp | CCTTGGGAACCTCCCCTTGAGCTGGATCCCACTTTGGGCCTGTCACTGAACCTTTTAGCACCACTATGGTaGTGTGGGAATAACAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: PWEPPLELDPTLGLSLNLLAPLW*CGNNKW Trigger: CCACTTGTTATTCCCACATCACCATAGTGGTGCTAA...AAGGTTCAGTGACAGGCCCAAAGTGGGATCCAGCTCAAGGGGAGGTTCCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR CAA 72 bp | TGGGTACAAATATCTGCATCTGATTCTTTCAGCTACTaGTTGGGTTTTCTGGAAGGTAGACATGATAGATCC | + |
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Preference number: 4 (lower is better) Translates to: WVQISASDSFSY*LGFLEGRHDRS Trigger: GGATCTATCATGTCTACCTTCCAGAAAACCCAACAAGTAGCTGAAAGAATCAGATGCAGATATTTGTACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| 3UTR CAA 72 bp | ATCCCTAATTCAACAAGAGCCTGCAGCTTCTATCCATaGGTTGGGTACAAATATCTGCATCTGATTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: IPNSTRACSFYP*VGYKYLHLILS Trigger: TGAAAGAATCAGATGCAGATATTTGTACCCAACCAATGGATAGAAGCTGCAGGCTCTTGTTGAATTAGGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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| CDS-3UTR CCA 90 bp | CATCTATACTCCAAATGCAAGGGCACCCACATAATAATAGTAGAATCTTCAACAATGGGAGAACTCAAATaGGAATCAAGCCTGATTGTG | + |
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Preference number: 4 (lower is better) Translates to: HLYSKCKGTHIIIVESSTMGELK*ESSLIV Trigger: CACAATCAGGCTTGATTCCCATTTGAGTTCTCCCAT...TGTTGAAGATTCTACTATTATTATGTGGGTGCCCTTGCATTTGGAGTATAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217152.2 |
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