Pregenerated sensors for OLFR73 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075140Ensembl transcript IDs: ENSMUST00000129056.3
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCAGCTATATCTGGGTCCTTTCAGCAAAATCTTGTTAGTGCATaGAATGGTGTCAGCATTTGGAAGCTGATTATGAAATTATTTTTC | + |
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Preference number: 1 (lower is better) Translates to: EAAISGSFQQNLVSA*NGVSIWKLIMKLFF Trigger: GAAAAATAATTTCATAATCAGCTTCCAAATGCTGACACCATTGCATGCACTAACAAGATTTTGCTGAAAGGACCCAGATATAGCTGCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR-3UTR TCA 90 bp | AGTATCTCACTCTACAGGAACAAGAATATACTCTTGGCTTTTCAGAGTCTTGTGTGGGCCTCTTTCCATTaGTGGCCGACTAGGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: SISLYRNKNILLAFQSLVWASFH*WPTRPS Trigger: AGATGGCCTAGTCGGCCATCAATGGAAAGAGGCCCA...CACAAGACTCTGAAAAGCCAAGAGTATATTCTTGTTCCTGTAGAGTGAGATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR-3UTR TCA 90 bp | CACCAAACAGAGTTGGGTGAAGAAATACTTACAGGAACACAAATTATTAGGAAGGCCTTGGAGTGTAAGTaGTCAAATACTGTATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: HQTELGEEILTGTQIIRKALECK*SNTVCF Trigger: GAAGCATACAGTATTTGATCACTTACACTCCAAGGC...CTTCCTAATAATTTGTGTTCCTGTAAGTATTTCTTCACCCAACTCTGTTTGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR-3UTR GCA 90 bp | AGTATCTCACTCTACAGGAACAAGAATATACTCTTGGCTTTTCAGAGTCTTGTGCATTTACATTTCCAATaGTATCCCAAAAGTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SISLYRNKNILLAFQSLVHLHFQ*YPKSPP Trigger: TGGGGGACTTTTGGGATAGCATTGGAAATGTAAATG...CACAAGACTCTGAAAAGCCAAGAGTATATTCTTGTTCCTGTAGAGTGAGATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTCCAATCAAAAGAAACTGCTATACCACACTATCCCATTCCAGAAGCTATTCAGAGGCAGCTATATCTaGGTCCTTTCAGCAAAATCT | + |
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Preference number: 2 (lower is better) Translates to: ISNQKKLLYHTIPFQKLFRGSYI*VLSAKS Trigger: AGATTTTGCTGAAAGGACCCAGATATAGCTGCCTCT...GAATAGCTTCTGGAATGGGATAGTGTGGTATAGCAGTTTCTTTTGATTGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGACCCCTTTAGCTCCTTaGTTACTTTCTCTAGCTCCTCCATTGGGAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VPPIGLQTPLAP*LLSLAPPLGAL Trigger: CAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGGTCTGCAACCCTATAGGTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR-3UTR CAA 90 bp | CACCAAACAGAGTTGGGTGAAGAAATACTTACAGGAACACAAATTATTAGGAAGCATCCACTTCTGTGTTaGCTAGGCCCCGGCATAGTT | + |
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Preference number: 3 (lower is better) Translates to: HQTELGEEILTGTQIIRKHPLLC*LGPGIV Trigger: AACTATGCCGGGGCCTAGCAAACACAGAAGTGGATG...CTTCCTAATAATTTGTGTTCCTGTAAGTATTTCTTCACCCAACTCTGTTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR GCA 72 bp | ATATCTGGGTCCTTTCAGCAAAATCTTGTTAGTGCATaGAATGGTGTCAGCATTTGGAAGCTGATTATGAAA | + |
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Preference number: 3 (lower is better) Translates to: ISGSFQQNLVSA*NGVSIWKLIMK Trigger: TTTCATAATCAGCTTCCAAATGCTGACACCATTGCATGCACTAACAAGATTTTGCTGAAAGGACCCAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR CCA 72 bp | CTAGTATCTCACTCTACAGGAACAAGAATATACTCTTaGCTTTTCAGAGTCTTGTGCCCAAATAGTTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: LVSHSTGTRIYS*LFRVLCPNSCL Trigger: TAAACAACTATTTGGGCACAAGACTCTGAAAAGCCAAGAGTATATTCTTGTTCCTGTAGAGTGAGATACTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCAATCAAAAGAAACTGCTATACCACACTATCCCATTCCAGAAGCTATTCCAATGGTGTCAGCATTaGGAAGCTGATTATGAAATT | + |
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Preference number: 3 (lower is better) Translates to: ISNQKKLLYHTIPFQKLFQWCQH*EADYEI Trigger: AATTTCATAATCAGCTTCCAAATGCTGACACCATTG...GAATAGCTTCTGGAATGGGATAGTGTGGTATAGCAGTTTCTTTTGATTGGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR-3UTR CAA 90 bp | ATCAAAAGAAACTGCTATACCACACTATCCCATTCCAGAAGCTATTCTTTTGATGTGAAAATAATGTTTTaGGAGAACCCTAGGAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: IKRNCYTTLSHSRSYSFDVKIMF*ENPRRS Trigger: ACTTCTCCTAGGGTTCTCCAAAAACATTATTTTCAC...ATCAAAAGAATAGCTTCTGGAATGGGATAGTGTGGTATAGCAGTTTCTTTTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR TCA 72 bp | TATATAGAGGTAGTATTGTGTGAGTTATTGCAAATATaGCAAGGACATCATTGTCTTGTACTCACAGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: YIEVVLCELLQI*QGHHCLVLTAV Trigger: TACAGCTGTGAGTACAAGACAATGATGTCCTTGTCATATTTGCAATAACTCACACAATACTACCTCTATATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR CAA 72 bp | GGGCCTCTTTCCATTGATGGCCGACTAGGCCATCTTTaGATACATATGCAGCTAGAGTCAAGAATTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GPLSIDGRLGHL*IHMQLESRIPG Trigger: CCCGGGAATTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCAATGGAAAGAGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| CDS-3UTR CCA 90 bp | CACAAGAGGCAGCTATATCTGGGTCCTTTCAGCAAAATCTTGTTAGTGCATGCAATCCCAATACCAGCATaGCACAGAGCCTCTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: HKRQLYLGPFSKILLVHAIPIPA*HRASGT Trigger: TGTCCCAGAGGCTCTGTGCCATGCTGGTATTGGGAT...TGCATGCACTAACAAGATTTTGCTGAAAGGACCCAGATATAGCTGCCTCTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| CDS-3UTR CCA 90 bp | CAGCTAGAGTCAAGAATTCCCGGGTACTGGTTAGTTCATAATGTTGTTCCACCTGATTTACCAGCATCTTaGGAGCAACAATGGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: QLESRIPGYWLVHNVVPPDLPAS*EQQWRN Trigger: ATTCCTCCATTGTTGCTCCCAAGATGCTGGTAAATC...AGGTGGAACAACATTATGAACTAACCAGTACCCGGGAATTCTTGACTCTAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| CDS-3UTR GCA 90 bp | CAGCTAGAGTCAAGAATTCCCGGGTACTGGTTAGTTCATAATGTTGTTCCACCTAAGTACATGGGGATGTaGAGTTTGGGATTAATTCTG | + |
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Preference number: 4 (lower is better) Translates to: QLESRIPGYWLVHNVVPPKYMGM*SLGLIL Trigger: CAGAATTAATCCCAAACTGCACATCCCCATGTACTT...AGGTGGAACAACATTATGAACTAACCAGTACCCGGGAATTCTTGACTCTAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| 3UTR CAA 72 bp | TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTaGCAGACCCCTTTAGCTCCTTGGTTACTTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: YWLVHNVVPPIG*QTPLAPWLLSL Trigger: TAGAGAAAGTAACCAAGGAGCTAAAGGGGTCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| CDS-3UTR TCA 90 bp | AACTGCTATACCACACTATCCCATTCCAGAAGCTATTCTTTTGATTATTTCCTTAACACAGCCCCACTGTaGTTTCCATCTGACAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: NCYTTLSHSRSYSFDYFLNTAPL*FPSDRV Trigger: GACTCTGTCAGATGGAAATCACAGTGGGGCTGTGTT...AAGGAAATAATCAAAAGAATAGCTTCTGGAATGGGATAGTGTGGTATAGCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| CDS-3UTR TCA 90 bp | ATCAAAAGAAACTGCTATACCACACTATCCCATTCCAGAAGCTATTCTTTTGATGCGGCGTCCACTTGCTaGCTTCATCTTCAGAATAGT | + |
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Preference number: 4 (lower is better) Translates to: IKRNCYTTLSHSRSYSFDAASTC*LHLQNS Trigger: ACTATTCTGAAGATGAAGTCAGCAAGTGGACGCCGC...ATCAAAAGAATAGCTTCTGGAATGGGATAGTGTGGTATAGCAGTTTCTTTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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| CDS-3UTR CAA 90 bp | ATCAAAAGAAACTGCTATACCACACTATCCCATTCCAGAAGCTATTCTTTTGATATGGGGATGTGCAGTTaGGGATTAATTCTGATTATG | + |
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Preference number: 5 (lower is better) Translates to: IKRNCYTTLSHSRSYSFDMGMCS*GLILIM Trigger: CATAATCAGAATTAATCCCAAACTGCACATCCCCAT...ATCAAAAGAATAGCTTCTGGAATGGGATAGTGTGGTATAGCAGTTTCTTTTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129056.3 |
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