Pregenerated sensors for OLFR728 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050030Ensembl transcript IDs: ENSMUST00000213685.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAGTCCCTCACACACTCTCCCACCCACTCCCACTTCTTGGCCCTaGTGTTCCCCTGTACTGAGGCAGATAGTTTGCATGACCAATGGG | + |
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Preference number: 1 (lower is better) Translates to: KSPSHTLPPTPTSWP*CSPVLRQIVCMTNG Trigger: CCCATTGGTCATGCAAACTATCTGCCTCAGTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTGGGTGGGAGAGTGTGTGAGGGACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | TATCTCAAAAGTCCCTCACACACTCTCCCACCCACTCCCACTTCTTaGCCCTGGTGTTCCCCTGTACTGAGGCAGATAGTTTGCATGACC | + |
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Preference number: 1 (lower is better) Translates to: YLKSPSHTLPPTPTS*PWCSPVLRQIVCMT Trigger: GGTCATGCAAACTATCTGCCTCAGTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTGGGTGGGAGAGTGTGTGAGGGACTTTTGAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | GCCCTGGTGTTCCCCTGTACTGAGGCAGATAGTTTGCATGACCAATaGGCCTCTCTTTCCACTGATGGCCTACTAGGCCATCTTCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: ALVFPCTEADSLHDQ*ASLSTDGLLGHLLK Trigger: TTTCAGAAGATGGCCTAGTAGGCCATCAGTGGAAAGAGAGGCCCATTGGTCATGCAAACTATCTGCCTCAGTACAGGGGAACACCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR TCA 90 bp | GTCAGGACAGAAACTCAAACTCAGCAAAAATCTGGAGGCAGGAGCTaGTGCAGAGGCCATGGAGGAGCACTGCTTACTGGCTTGCTTACA | + |
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Preference number: 1 (lower is better) Translates to: VRTETQTQQKSGGRS*CRGHGGALLTGLLT Trigger: TGTAAGCAAGCCAGTAAGCAGTGCTCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGATTTTTGCTGAGTTTGAGTTTCTGTCCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR GCA 90 bp | GGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTGCCTTCTaGAGCACACACACAGCTTGTCTTTGGAACTCAAGAATGCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: GHLQTKPLGHFFSAF*STHTACLWNSRMLH Trigger: GTGAAGCATTCTTGAGTTCCAAAGACAAGCTGTGTGTGTGCTGCAGAAGGCAGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | TCAAACTCAGCAAAAATCTGGAGGCAGGAGCTGATGCAGAGGCCATaGAGGAGCACTGCTTACTGGCTTGCTTACAGGCTTACTCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: SNSAKIWRQELMQRP*RSTAYWLAYRLTQS Trigger: AGACTGAGTAAGCCTGTAAGCAAGCCAGTAAGCAGTGCTCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGATTTTTGCTGAGTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR GCA 90 bp | AACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTaGCTTCTGCAGCACACACACAGCTTGTCTTTGGAACTCAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: NFWTPPNKAPGSLLL*LLQHTHSLSLELKN Trigger: ATTCTTGAGTTCCAAAGACAAGCTGTGTGTGTGCTGCAGAAGGCAGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR GCA 90 bp | CTGCCTTCTGCAGCACACACACAGCTTGTCTTTGGAACTCAAGAATaGTTCACTGAAAGGCAGCTGCTGTTTTTATGGTCATCTTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: LPSAAHTQLVFGTQE*FTERQLLFLWSSCD Trigger: ATCACAAGATGACCATAAAAACAGCAGCTGCCTTTCAGTGAAGCATTCTTGAGTTCCAAAGACAAGCTGTGTGTGTGCTGCAGAAGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | TCTGTTCCAATGCCTTCTTCTCTCAAGCATGCACCTATGCCCTCATaGTATGTGCCCTCTGATCAGATGATTAAGGTAGAGAAGATAAGG | + |
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Preference number: 1 (lower is better) Translates to: SVPMPSSLKHAPMPS*YVPSDQMIKVEKIR Trigger: CCTTATCTTCTCTACCTTAATCATCTGATCAGAGGGCACATACCATGAGGGCATAGGTGCATGCTTGAGAGAAGAAGGCATTGGAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | CTGCTCTATCACTGGGACAATATGGTTCAGCAGATGAAATGTTACTaGAGGGATCAGTGGCAGATAGAAATGCTGTTTAGCACCTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: LLYHWDNMVQQMKCY*RDQWQIEMLFSTFG Trigger: GCCAAAGGTGCTAAACAGCATTTCTATCTGCCACTGATCCCTCCAGTAACATTTCATCTGCTGAACCATATTGTCCCAGTGATAGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR GCA 90 bp | ATGGAGGAGCACTGCTTACTGGCTTGCTTACAGGCTTACTCAGTCTaGTTTCTTGTAGATTCTAAGACAATCTGTCAAGGTGTAGCATCA | + |
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Preference number: 1 (lower is better) Translates to: MEEHCLLACLQAYSV*FLVDSKTICQGVAS Trigger: TGATGCTACACCTTGACAGATTGTCTTAGAATCTACAAGAAAGCAGACTGAGTAAGCCTGTAAGCAAGCCAGTAAGCAGTGCTCCTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | ATCTCTTCCATTTCCAAGTTCAGCTGCCAGTATGAGGTACAACCTTaGCTGCTTATAGAACTTGTTAATCAGTCGTGTTGCTTCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: ISSISKFSCQYEVQP*LLIELVNQSCCFQA Trigger: TGCCTGGAAGCAACACGACTGATTAACAAGTTCTATAAGCAGCCAAGGTTGTACCTCATACTGGCAGCTGAACTTGGAAATGGAAGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | ATACCAGGGCACAGTCATCATCAAATCAAAGCAATGTTACATATCTaGGATTCACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCT | + |
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Preference number: 1 (lower is better) Translates to: IPGHSHHQIKAMLHI*DSLKNFWTPPNKAP Trigger: AGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATGATGACTGTGCCCTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | GAAATACCATGCCCAAAAAGCAAGTTGGGGAGGAAAGTGTTCGTTTaGCTTATACTTTCAGATAATGGTTCATCAATGGAGGAAGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: EIPCPKSKLGRKVFV*LILSDNGSSMEEVR Trigger: CCTGACTTCCTCCATTGATGAACCATTATCTGAAAGTATAAGCCAAACGAACACTTTCCTCCCCAACTTGCTTTTTGGGCATGGTATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR TCA 90 bp | AAAGTGACCCTTAGTGGCAGAGATGGAAGATATGTATTGGCTCTATaGCATGGATTTCACTCACCAAGTCTGGTATGTATACAGATTCTG | + |
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Preference number: 1 (lower is better) Translates to: KVTLSGRDGRYVLAL*HGFHSPSLVCIQIL Trigger: CAGAATCTGTATACATACCAGACTTGGTGAGTGAAATCCATGTCATAGAGCCAATACATATCTTCCATCTCTGCCACTAAGGGTCACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR TCA 90 bp | GCACTTAATGCTTCTTCCAAAACTAACATTTGTGGACCTACAGAATaGTTTGTCCACCAGCATGCTATTCCACACAGTATTGCTTTTGAC | + |
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Preference number: 1 (lower is better) Translates to: ALNASSKTNICGPTE*FVHQHAIPHSIAFD Trigger: GTCAAAAGCAATACTGTGTGGAATAGCATGCTGGTGGACAAATCATTCTGTAGGTCCACAAATGTTAGTTTTGGAAGAAGCATTAAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | TCCCTAAATTGTGTAATGAGGGCTGTAATAGTAACAAAGACAAAATaGAAGCCATTGGAGTGGCTGACAAGGGAAAATAGTGAGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: SLNCVMRAVIVTKTK*KPLEWLTRENSETK Trigger: CTTTGTCTCACTATTTTCCCTTGTCAGCCACTCCAATGGCTTCCATTTTGTCTTTGTTACTATTACAGCCCTCATTACACAATTTAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR TCA 90 bp | TTCTCCAATTATCTTTATCATTGCACAGTGAGCCCATTAATAAAGTaGCCCTTAGTGGCAGAGATGGAAGATATGTATTGGCTCTATGAC | + |
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Preference number: 1 (lower is better) Translates to: FSNYLYHCTVSPLIK*PLVAEMEDMYWLYD Trigger: GTCATAGAGCCAATACATATCTTCCATCTCTGCCACTAAGGGTCACTTTATTAATGGGCTCACTGTGCAATGATAAAGATAATTGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR TCA 90 bp | ATCACTAAGAAAATGCCTCATAGGCCTGCCTACAACCTAATATTATaGACCCATTTTCTTAATTGCGGTTCCCTCCTTTCAGATGACTTT | + |
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Preference number: 1 (lower is better) Translates to: ITKKMPHRPAYNLIL*THFLNCGSLLSDDF Trigger: AAAGTCATCTGAAAGGAGGGAACCGCAATTAAGAAAATGGGTTCATAATATTAGGTTGTAGGCAGGCCTATGAGGCATTTTCTTAGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR TCA 90 bp | TGTAGTCAAGACAAAGACATCCAGCCTCATGGAATAAACAATTATTaGTTCCTAGACTTTCCTTTGGGAGACAGGAGTAGTAATTTCATA | + |
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Preference number: 1 (lower is better) Translates to: CSQDKDIQPHGINNY*FLDFPLGDRSSNFI Trigger: TATGAAATTACTACTCCTGTCTCCCAAAGGAAAGTCTAGGAATCAATAATTGTTTATTCCATGAGGCTGGATGTCTTTGTCTTGACTACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | GATTGGTTCTCTACAATGCACATAAGAAGAATTATGTCTGTAGTATaGGACCCTTTAAGGCATCTCTTAGTGTTACCCATGATTAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: DWFSTMHIRRIMSVV*DPLRHLLVLPMIKV Trigger: AACTTTAATCATGGGTAACACTAAGAGATGCCTTAAAGGGTCCCATACTACAGACATAATTCTTCTTATGTGCATTGTAGAGAACCAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CCA 90 bp | AAAACCAGAAAAGTGCAATTGTGTGTTCACAATTATGGAATCTATTaGTATTATCATGTTTCACACCACACCATCTTGAAGGAACTGACC | + |
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Preference number: 1 (lower is better) Translates to: KTRKVQLCVHNYGIY*YYHVSHHTILKELT Trigger: GGTCAGTTCCTTCAAGATGGTGTGGTGTGAAACATGATAATACCAATAGATTCCATAATTGTGAACACACAATTGCACTTTTCTGGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CAA 90 bp | TCCCACTTCTTGGCCCTGGTGTTCCCCTGTACTGAGGCAGATAGTTaGCATGACCAATGGGCCTCTCTTTCCACTGATGGCCTACTAGGC | + |
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Preference number: 2 (lower is better) Translates to: SHFLALVFPCTEADS*HDQWASLSTDGLLG Trigger: GCCTAGTAGGCCATCAGTGGAAAGAGAGGCCCATTGGTCATGCAAACTATCTGCCTCAGTACAGGGGAACACCAGGGCCAAGAAGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CAA 90 bp | CTATCTCAAAAGTCCCTCACACACTCTCCCACCCACTCCCACTTCTaGGCCCTGGTGTTCCCCTGTACTGAGGCAGATAGTTTGCATGAC | + |
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Preference number: 2 (lower is better) Translates to: LSQKSLTHSPTHSHF*ALVFPCTEADSLHD Trigger: GTCATGCAAACTATCTGCCTCAGTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTGGGTGGGAGAGTGTGTGAGGGACTTTTGAGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR CAA 90 bp | GCCCCTGGGTCACTTCTTCTCTGCCTTCTGCAGCACACACACAGCTaGTCTTTGGAACTCAAGAATGCTTCACTGAAAGGCAGCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: APGSLLLCLLQHTHS*SLELKNASLKGSCC Trigger: ACAGCAGCTGCCTTTCAGTGAAGCATTCTTGAGTTCCAAAGACAAGCTGTGTGTGTGCTGCAGAAGGCAGAGAAGAAGTGACCCAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR CCA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTGCACCATGGCTACTGTaGGCTTCTGATGGCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSAPWLL*ASDGLQ Trigger: CTGAAGGCCATCAGAAGCCCACAGTAGCCATGGTGC...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTCTCAGGGAAGGAACCATGTGGTaGTTACCCTCATTCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: PGGIAENSATCQGLESLREGTMW*LPSFSL Trigger: CAGTGAGAATGAGGGTAAGCACCACATGGTTCCTTC...CCTGAGACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTCTCAGGTACCCTCATTCTCACTaGAAAGTTCAATCCTTCGCT | + |
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Preference number: 2 (lower is better) Translates to: PGGIAENSATCQGLESLRYPHSH*KVQSFA Trigger: AGCGAAGGATTGAACTTTTCAGTGAGAATGAGGGTA...CCTGAGACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACCAAACAAGGGTGGTTTaGATGATTTTGGAATCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ICQGVASPTVVGPSLINHQTRVV*MILESP Trigger: AGGGGATTCCAAAATCATGCAAACCACCCTTGTTTG...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACATCCAATGCATTTCCTaGATGGTAAGAGACCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: ICQGVASPTVVGPSLINHIQCIS*MVRDLE Trigger: CTCTAGGTCTCTTACCATCCAGGAAATGCATTGGAT...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACTATGCAAATGCTCATTaGAAGGTAAGTTCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ICQGVASPTVVGPSLINHYANAH*KVSSAE Trigger: CTCTGCTGAACTTACCTTTCAATGAGCATTTGCATA...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGGATACACCTTCAACAATAACCTCCTCAGTGCCAAGTCTCAGCTCTTCTAGCCATTGGAGTGGCTaGCAAGGGAAAATAGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RKDTPSTITSSVPSLSSSSHWSG*QGKIVR Trigger: TCTCACTATTTTCCCTTGTCAGCCACTCCAATGGCT...AGAAGAGCTGAGACTTGGCACTGAGGAGGTTATTGTTGAAGGTGTATCCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTCTCAGCTCTTCTCCATaGATCCTTCATACCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSLSSSP*ILHTFK Trigger: TTTGAAGGTATGAAGGATTCATGGAGAAGAGCTGAG...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR GCA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTATTTGTCCACCAGCATaGTATTCCACACAGTATTGC | + |
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Preference number: 2 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSICPPA*YSTQYC Trigger: GCAATACTGTGTGGAATAGCATGCTGGTGGACAAAT...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACACCCATTTTCTTAATTaGGGTTCCCTCCTTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ICQGVASPTVVGPSLINHTHFLN*GSLLSD Trigger: ATCTGAAAGGAGGGAACCGCAATTAAGAAAATGGGT...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACGATTTTGGAATCCCCTaGAGAGTCTTCATTCTGATT | + |
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Preference number: 2 (lower is better) Translates to: ICQGVASPTVVGPSLINHDFGIP*RVFILI Trigger: AATCAGAATGAAGACTCTCCAGGGGATTCCAAAATC...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTTTCATCCCCAGGTCATaGCTTAGTTTGAAGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSFIPRS*LSLKCF Trigger: AAAACACTTCAAACTAAGTCATGACCTGGGGATGAA...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTTGTGGACCATTTTTCTaGCTTAACAAGCCTGATAAC | + |
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Preference number: 2 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSCGPFF*LNKPDN Trigger: GTTATCAGGCTTGTTAAGTCAGAAAAATGGTCCACA...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR CCA 90 bp | CATAACCCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTCAGATGAAATGTTACTaGAGGGATCAGTGGCAGATA | + |
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Preference number: 2 (lower is better) Translates to: HNPGGIAENSATCQGLESQMKCY*RDQWQI Trigger: TATCTGCCACTGATCCCTCCAGTAACATTTCATCTG...ACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGGGTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTGAACAAATACTTCATTaGACTAAAAGCTCAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSEQILH*TKSSDS Trigger: GCTGTCTGAGCTTTTAGTTCAATGAAGTATTTGTTC...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGGATACACCTTCAACAATAACCTCCTCAGTGCCAAGTCTCAGCTCTTCTATCAAACGAGTTGAATaGAGAAGTTGCCCAAATGCC | + |
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Preference number: 2 (lower is better) Translates to: RKDTPSTITSSVPSLSSSIKRVE*RSCPNA Trigger: GGCATTTGGGCAACTTCTTCATTCAACTCGTTTGAT...AGAAGAGCTGAGACTTGGCACTGAGGAGGTTATTGTTGAAGGTGTATCCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTCTCAGGGAAATGACCAGGTTGTaGAAATATTTGCTGATTTGT | + |
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Preference number: 2 (lower is better) Translates to: PGGIAENSATCQGLESLREMTRL*KYLLIC Trigger: ACAAATCAGCAAATATTTGCACAACCTGGTCATTTC...CCTGAGACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACAAAGACAGACTGTATTaGATCATGTTAAGAGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: ICQGVASPTVVGPSLINHKDRLY*IMLRGN Trigger: ATTCCCTCTTAACATGATCCAATACAGTCTGTCTTT...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCCCTCTGATCAGATGATTAAGGTAGAGAAGATAAGGACTTGGTTTAAAGATCAAGGGTGGTTTGCATaGTTTTGGAATCCCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VPSDQMIKVEKIRTWFKDQGWFA*FWNPLE Trigger: CTCCAGGGGATTCCAAAATCATGCAAACCACCCTTG...ATCTTTAAACCAAGTCCTTATCTTCTCTACCTTAATCATCTGATCAGAGGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGGATACACCTTCAACAATAACCTCCTCAGTGCCAAGTCTCAGCTCTTCTCTTGTTTCCATTACCTaGTGTTTCCTCTATCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: RKDTPSTITSSVPSLSSSLVSIT*CFLYPR Trigger: TCTAGGATAGAGGAAACATCAGGTAATGGAAACAAG...AGAAGAGCTGAGACTTGGCACTGAGGAGGTTATTGTTGAAGGTGTATCCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | CATAACCCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTACACAGTATTGCTTTTaGCAAAGGAATTCGCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: HNPGGIAENSATCQGLESTQYCF*QRNSLQ Trigger: TTGAAGCGAATTCCTTTGTCAAAAGCAATACTGTGT...ACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGGGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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| 3UTR-3UTR TCA 90 bp | CATAACCCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTGCAGGCACCTATAAGTaGATAACAGAGGTAAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: HNPGGIAENSATCQGLESAGTYK*ITEVKI Trigger: AATTTTTACCTCTGTTATTCACTTATAGGTGCCTGC...ACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGGGTTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR GCA 90 bp | CATAACCCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTACTAGTAGGTCTGATTaGAGCTTTAGTACCAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: HNPGGIAENSATCQGLESTSRSD*SFSTRY Trigger: ATATCTGGTACTAAAGCTGCAATCAGACCTACTAGT...ACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGGGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGGATACACCTTCAACAATAACCTCCTCAGTGCCAAGTCTCAGCTCTTCTTATATGGATTTTGGATaGAGTACATTCCACAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RKDTPSTITSSVPSLSSSYMDFG*STFHSV Trigger: CACACTGTGGAATGTACTTCATCCAAAATCCATATA...AGAAGAGCTGAGACTTGGCACTGAGGAGGTTATTGTTGAAGGTGTATCCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACACACCTGCCAAGGACTTaGAAGTCTCAGGTGTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTHLPRT*KSQVLR Trigger: TCTCAACACCTGAGACTTTCAAGTCCTTGGCAGGTG...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAGGATACACCTTCAACAATAACCTCCTCAGTGCCAAGTCTCAGCTCTTCTAAGAAGTTGCCCAAATaGCTATGGCTTATTTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: RKDTPSTITSSVPSLSSSKKLPK*LWLISV Trigger: AACAGAAATAAGCCATAGGCATTTGGGCAACTTCTT...AGAAGAGCTGAGACTTGGCACTGAGGAGGTTATTGTTGAAGGTGTATCCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACACTACTCCAAGCAGAATaGCAAAGAGCCCAGACACTT | + |
|
Preference number: 2 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTLLQAE*QRAQTL Trigger: AAGTGTCTGGGCTCTTTGTCATTCTGCTTGGAGTAG...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCCTCTGATCAGATGATTAAGGTAGAGAAGATAAGGACTTGGTTTAAAGATTTAGGAATAAAAGATTaGGTCAGCCTCCCAGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VPSDQMIKVEKIRTWFKDLGIKD*VSLPGS Trigger: ACTGCCTGGGAGGCTGACCCAATCTTTTATTCCTAA...ATCTTTAAACCAAGTCCTTATCTTCTCTACCTTAATCATCTGATCAGAGGGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACAAGCCCATTAATAAAGTaGCCCTTAGTGGCAGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTSPLIK*PLVAEM Trigger: CATCTCTGCCACTAAGGGTCACTTTATTAATGGGCT...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 90 bp | GGTCATCTCTATAACTTAAACATTTATGCCACAAACAAGGGTGGTTaGCATGATTTTGGAATCCCCTGGAGAGTCTTCATTCTGATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: GHLYNLNIYATNKGG*HDFGIPWRVFILIQ Trigger: TTGAATCAGAATGAAGACTCTCCAGGGGATTCCAAAATCATGCAAACCACCCTTGTTTGTGGCATAAATGTTTAAGTTATAGAGATGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 90 bp | CTAGTAGGTCTGATTGCAGCTTTAGTACCAGATATGTGCTCTTATTaGAGCAGATTAACACATATCCTGGTACATTGTATGCAGTTACTG | + |
|
Preference number: 2 (lower is better) Translates to: LVGLIAALVPDMCSY*SRLTHILVHCMQLL Trigger: CAGTAACTGCATACAATGTACCAGGATATGTGTTAATCTGCTCAAATAAGAGCACATATCTGGTACTAAAGCTGCAATCAGACCTACTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACAAATCCCCCAGACAAATaGAAGACAGACTGTATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTNPPDK*KTDCIG Trigger: TCCAATACAGTCTGTCTTTCATTTGTCTGGGGGATT...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCCCTCTGATCAGATGATTAAGGTAGAGAAGATAAGGACTTGGTTTAAAGATAAGAGACCTAGAGTATaGTTGGAAATTTTGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VPSDQMIKVEKIRTWFKDKRPRV*LEILGR Trigger: TCTTCCCAAAATTTCCAATCATACTCTAGGTCTCTT...ATCTTTAAACCAAGTCCTTATCTTCTCTACCTTAATCATCTGATCAGAGGGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGCCCTCTGATCAGATGATTAAGGTAGAGAAGATAAGGACTTGGTTTAAAGATTGTCTCCTATGCAAATaGTCATTGAAAGGTAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VPSDQMIKVEKIRTWFKDCLLCK*SLKGKF Trigger: GAACTTACCTTTCAATGAGCATTTGCATAGGAGACA...ATCTTTAAACCAAGTCCTTATCTTCTCTACCTTAATCATCTGATCAGAGGGCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGCATGCTATTCCACACAGTATTGCTTTTGACAAAGGAATTCGCTTCAAAGACCTAAGAGAACAATaGAGTGGCTTTTTGAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: HQHAIPHSIAFDKGIRFKDLREQ*SGFLKI Trigger: TATTTTCAAAAAGCCACTCCATTGTTCTCTTAGGTC...TTTGAAGCGAATTCCTTTGTCAAAAGCAATACTGTGTGGAATAGCATGCTGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 90 bp | CAAAACCAGAAAAGTGCAATTGTGTGTTCACAATTATGGAATCTATaGGTATTATCATGTTTCACACCACACCATCTTGAAGGAACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: QNQKSAIVCSQLWNL*VLSCFTPHHLEGTD Trigger: GTCAGTTCCTTCAAGATGGTGTGGTGTGAAACATGATAATACCAATAGATTCCATAATTGTGAACACACAATTGCACTTTTCTGGTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGGTTCCCTAAATTGTGTAATGAGGGCTGTAATAGTAACAAAGACAAAATGGGGAGAGTCTTCATTCTaGTTCAATATGAGGCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: IGSLNCVMRAVIVTKTKWGESSF*FNMRLF Trigger: AAACAGCCTCATATTGAATCAGAATGAAGACTCTCC...CCATTTTGTCTTTGTTACTATTACAGCCCTCATTACACAATTTAGGGAACCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR GCA 90 bp | AATTATGTCTGTAGTATGGGACCCTTTAAGGCATCTCTTAGTGTTACCCATGATAATAACCCACAAGTATaGAAAATGTTTGGTACACCT | + |
|
Preference number: 2 (lower is better) Translates to: NYVCSMGPFKASLSVTHDNNPQV*KMFGTP Trigger: AGGTGTACCAAACATTTTGCATACTTGTGGGTTATT...ATCATGGGTAACACTAAGAGATGCCTTAAAGGGTCCCATACTACAGACATAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 90 bp | CCTGGTACATTGTATGCAGTTACTGATCTAGCAAATGTGTTTTTCTaGGTAATGTCTATAAGAACCACTAGAAGCAATTTGCTTTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PGTLYAVTDLANVFF*VMSIRTTRSNLLSV Trigger: AACTGAAAGCAAATTGCTTCTAGTGGTTCTTATAGACATTACCAAGAAAAACACATTTGCTAGATCAGTAACTGCATACAATGTACCAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACTGCTTATATGGATTTTaGATGAAGTACATTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: SSNQSNVTYLGFTQELLDCLYGF*MKYIPQ Trigger: CTGTGGAATGTACTTCATCCAAAATCCATATAAGCA...GTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR GCA 72 bp | GAGGCAGGAGCTGATGCAGAGGCCATGGAGGAGCACTaGTTACTGGCTTGCTTACAGGCTTACTCAGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EAGADAEAMEEH*LLACLQAYSVC Trigger: GCAGACTGAGTAAGCCTGTAAGCAAGCCAGTAAGCAGTGCTCCTCCATGGCCTCTGCATCAGCTCCTGCCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | AGGGTGAGGCCTAGAACACAGGAAAGCTCCATCAGTTaGCTCAGGGTACTGTGCAGGCTGCTCTATCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVRPRTQESSIS*LRVLCRLLYHW Trigger: CCAGTGATAGAGCAGCCTGCACAGTACCCTGAGCCAACTGATGGAGCTTTCCTGTGTTCTAGGCCTCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | TCACACACTCTCCCACCCACTCCCACTTCTTGGCCCTaGTGTTCCCCTGTACTGAGGCAGATAGTTTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: SHTLPPTPTSWP*CSPVLRQIVCM Trigger: CATGCAAACTATCTGCCTCAGTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTGGGTGGGAGAGTGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | GAAACTCAAACTCAGCAAAAATCTGGAGGCAGGAGCTaGTGCAGAGGCCATGGAGGAGCACTGCTTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ETQTQQKSGGRS*CRGHGGALLTG Trigger: GCCAGTAAGCAGTGCTCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGATTTTTGCTGAGTTTGAGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR GCA 72 bp | ACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTaGCTTCTGCAGCACACACACAGCTTGTCTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TPPNKAPGSLLL*LLQHTHSLSLE Trigger: TTCCAAAGACAAGCTGTGTGTGTGCTGCAGAAGGCAGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | TTCCCCTGTACTGAGGCAGATAGTTTGCATGACCAATaGGCCTCTCTTTCCACTGATGGCCTACTAGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FPCTEADSLHDQ*ASLSTDGLLGH Trigger: ATGGCCTAGTAGGCCATCAGTGGAAAGAGAGGCCCATTGGTCATGCAAACTATCTGCCTCAGTACAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | ACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTaGGTCACTTCTTCTCTGCCTTCTGCAGCACACACA | + |
|
Preference number: 3 (lower is better) Translates to: TQELLDTSKQSP*VTSSLPSAAHT Trigger: TGTGTGTGCTGCAGAAGGCAGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | AGTGCCACCTGCCAAGGACTTGAAAGTCTCAGGTGTTaGGATTTCCAACACAGCTCCCTATCTGGTGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: SATCQGLESLRC*DFQHSSLSGDH Trigger: ATGGTCACCAGATAGGGAGCTGTGTTGGAAATCTCAACACCTGAGACTTTCAAGTCCTTGGCAGGTGGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACGGTCATGCATTTTGTTaGGAAAGCGAAATGACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ICQGVASPTVVGPSLINHGHAFC*ESEMTR Trigger: CCTGGTCATTTCGCTTTCCAAACAAAATGCATGACC...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGGATACACCTTCAACAATAACCTCCTCAGTGCCAAGTCTCAGCTCTTCTCCACCTGCCAAGGACTaGAAAGTCTCAGGTGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RKDTPSTITSSVPSLSSSPPAKD*KVSGVE Trigger: CTCAACACCTGAGACTTTCAAGTCCTTGGCAGGTGG...AGAAGAGCTGAGACTTGGCACTGAGGAGGTTATTGTTGAAGGTGTATCCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTCTCAGGAGTAAAAACACCCCCTaGAGATACTCAATGCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PGGIAENSATCQGLESLRSKNTP*RYSMQM Trigger: CATCTGCATTGAGTATCTCAAGGGGGTGTTTTTACT...CCTGAGACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTTTCCTAGACTTTCCTTaGGGAGACAGGAGTAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSFLDFP*GDRSSN Trigger: ATTACTACTCCTGTCTCCCAAAGGAAAGTCTAGGAA...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTCTCAGGCAAGGAGAAATTGGATaGGTTCTCTACAATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: PGGIAENSATCQGLESLRQGEIG*VLYNAH Trigger: ATGTGCATTGTAGAGAACCAATCCAATTTCTCCTTG...CCTGAGACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CATAACCCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTGACCTACAGAATGATTaGTCCACCAGCATGCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: HNPGGIAENSATCQGLESDLQND*STSMLF Trigger: GAATAGCATGCTGGTGGACAAATCATTCTGTAGGTC...ACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGGGTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | AGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTaGAAGTCTCAGGTGTTGAGATTTCCAACACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RNSRKQCHLPRT*KSQVLRFPTQL Trigger: GAGCTGTGTTGGAAATCTCAACACCTGAGACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | GATGGCCTACTAGGCCATCTTCTGAAAATTCTTAAATaGAGGGAAGGCCAGGACCCCCGAGGAAAGAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: DGLLGHLLKILK*REGQDPRGKNL Trigger: CAAATTCTTTCCTCGGGGGTCCTGGCCTTCCCTTCATTTAAGAATTTTCAGAAGATGGCCTAGTAGGCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACGGCATCTACAAAATTTaGAGGTCTTCTTTTGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: ICQGVASPTVVGPSLINHGIYKI*RSSFAT Trigger: AGTTGCAAAAGAAGACCTCAAAATTTTGTAGATGCC...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR GCA 72 bp | AGTTGCCCAAATGCCTATGGCTTATTTCTGTTCCAATaGCTTCTTCTCTCAAGCATGCACCTATGCCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SCPNAYGLFLFQ*LLLSSMHLCPH Trigger: ATGAGGGCATAGGTGCATGCTTGAGAGAAGAAGGCATTGGAACAGAAATAAGCCATAGGCATTTGGGCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR GCA 72 bp | TACCACCTCGGTATCTCTTCCATTTCCAAGTTCAGCTaGCAGTATGAGGTACAACCTTGGCTGCTTATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: YHLGISSISKFS*QYEVQPWLLIE Trigger: TTCTATAAGCAGCCAAGGTTGTACCTCATACTGGCAGCTGAACTTGGAAATGGAAGAGATACCGAGGTGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR GCA 72 bp | GCAGCACACACACAGCTTGTCTTTGGAACTCAAGAATaGTTCACTGAAAGGCAGCTGCTGTTTTTATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: AAHTQLVFGTQE*FTERQLLFLWS Trigger: TGACCATAAAAACAGCAGCTGCCTTTCAGTGAAGCATTCTTGAGTTCCAAAGACAAGCTGTGTGTGTGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | ATGGTTCAGCAGATGAAATGTTACTGGAGGGATCAGTaGCAGATAGAAATGCTGTTTAGCACCTTTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MVQQMKCYWRDQ*QIEMLFSTFGR Trigger: CCTGCCAAAGGTGCTAAACAGCATTTCTATCTGCCACTGATCCCTCCAGTAACATTTCATCTGCTGAACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | GCAATGTTACATATCTGGGATTCACTCAAGAACTTCTaGACACCTCCAAACAAAGCCCCTGGGTCACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AMLHIWDSLKNF*TPPNKAPGSLL Trigger: AAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGGATACACCTTCAACAATAACCTCCTCAGTGCCAAGTCTCAGCTCTTCTGTCACCAAGGAGAAATaGGATTGGTTCTCTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: RKDTPSTITSSVPSLSSSVTKEK*DWFSTM Trigger: CATTGTAGAGAACCAATCCAATTTCTCCTTGGTGAC...AGAAGAGCTGAGACTTGGCACTGAGGAGGTTATTGTTGAAGGTGTATCCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTACCAGAAAAGTGCAATaGTGTGTTCACAATTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSTRKVQ*CVHNYG Trigger: TCCATAATTGTGAACACACAATTGCACTTTTCTGGT...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | CACTGGGACAATATGGTTCAGCAGATGAAATGTTACTaGAGGGATCAGTGGCAGATAGAAATGCTGTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HWDNMVQQMKCY*RDQWQIEMLFS Trigger: GCTAAACAGCATTTCTATCTGCCACTGATCCCTCCAGTAACATTTCATCTGCTGAACCATATTGTCCCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTCCTGGCAATAAGGTGTACAAAATAGAATGTTCTACTCACTATAACCCCTTTAGGAATAAAAGATaGGGTCAGCCTCCCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KGPGNKVYKIECSTHYNPFRNKR*GQPPRQ Trigger: CTGCCTGGGAGGCTGACCCAATCTTTTATTCCTAAA...GGGGTTATAGTGAGTAGAACATTCTATTTTGTACACCTTATTGCCAGGACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CATAACCCAGGAGGAATAGCAGAAAACAGTGCCACCTGCCAAGGACTTGAAAGTGCAATTATTTTAGACTaGTTGGCAACACATACCACA | + |
|
Preference number: 3 (lower is better) Translates to: HNPGGIAENSATCQGLESAIILD*LATHTT Trigger: TGTGGTATGTGTTGCCAACAAGTCTAAAATAATTGC...ACTTTCAAGTCCTTGGCAGGTGGCACTGTTTTCTGCTATTCCTCCTGGGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | AAATACTTCATTGAACTAAAAGCTCAGACAGCACCATaGCTACTGTGGGCTTCTGATGGCCTTCAGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KYFIELKAQTAP*LLWASDGLQTK Trigger: TTTTGTCTGAAGGCCATCAGAAGCCCACAGTAGCCATGGTGCTGTCTGAGCTTTTAGTTCAATGAAGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | ATTTCCAAGTTCAGCTGCCAGTATGAGGTACAACCTTaGCTGCTTATAGAACTTGTTAATCAGTCGTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ISKFSCQYEVQP*LLIELVNQSCC Trigger: GCAACACGACTGATTAACAAGTTCTATAAGCAGCCAAGGTTGTACCTCATACTGGCAGCTGAACTTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | ACAAACAAGGGTGGTTTGCATGATTTTGGAATCCCCTaGAGAGTCTTCATTCTGATTCAATATGAGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TNKGGLHDFGIP*RVFILIQYEAV Trigger: AACAGCCTCATATTGAATCAGAATGAAGACTCTCCAGGGGATTCCAAAATCATGCAAACCACCCTTGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | GAGCCTATAAAGAAGAAATGGACAGAAGGAACCATGTaGTGCTTACCCTCATTCTCACTGAAAAGTTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: EPIKKKWTEGTM*CLPSFSLKSSI Trigger: GATTGAACTTTTCAGTGAGAATGAGGGTAAGCACCACATGGTTCCTTCTGTCCATTTCTTCTTTATAGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACGTGGTTTGCATGATTTaGGAATCCCCTGGAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSNQSNVTYLGFTQELLDVVCMI*ESPGES Trigger: AGACTCTCCAGGGGATTCCAAAATCATGCAAACCAC...GTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACGAGAGGATAGAACTCTaGCCAGGAGAGAGAACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSNQSNVTYLGFTQELLDERIEL*PGERTN Trigger: ATTTGTTCTCTCTCCTGGCAAGAGTTCTATCCTCTC...GTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACACAGCACACACACAGCTaGTCTTTGGAACTCAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTQHTHS*SLELKN Trigger: ATTCTTGAGTTCCAAAGACAAGCTGTGTGTGTGCTG...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | GACAAAGACATCCAGCCTCATGGAATAAACAATTATTaGTTCCTAGACTTTCCTTTGGGAGACAGGAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: DKDIQPHGINNY*FLDFPLGDRSS Trigger: ACTACTCCTGTCTCCCAAAGGAAAGTCTAGGAATCAATAATTGTTTATTCCATGAGGCTGGATGTCTTTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | GCTTCTTCCAAAACTAACATTTGTGGACCTACAGAATaGTTTGTCCACCAGCATGCTATTCCACACAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: ASSKTNICGPTE*FVHQHAIPHSI Trigger: AATACTGTGTGGAATAGCATGCTGGTGGACAAATCATTCTGTAGGTCCACAAATGTTAGTTTTGGAAGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | CTTAGTGGCAGAGATGGAAGATATGTATTGGCTCTATaGCATGGATTTCACTCACCAAGTCTGGTATGTATA | + |
|
Preference number: 3 (lower is better) Translates to: LSGRDGRYVLAL*HGFHSPSLVCI Trigger: TATACATACCAGACTTGGTGAGTGAAATCCATGTCATAGAGCCAATACATATCTTCCATCTCTGCCACTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR GCA 72 bp | CCTATAAAGAAGAAATGGACAGAAGGAACCATGTGGTaGTTACCCTCATTCTCACTGAAAAGTTCAATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PIKKKWTEGTMW*LPSFSLKSSIL Trigger: AAGGATTGAACTTTTCAGTGAGAATGAGGGTAAGCACCACATGGTTCCTTCTGTCCATTTCTTCTTTATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | TGGCAGAGATGGAAGATATGTATTGGCTCTATGACATaGATTTCACTCACCAAGTCTGGTATGTATACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: WQRWKICIGSMT*ISLTKSGMYTD Trigger: ATCTGTATACATACCAGACTTGGTGAGTGAAATCCATGTCATAGAGCCAATACATATCTTCCATCTCTGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | GAAAAATCCCCCAGACAAATGAAAGACAGACTGTATTaGATCATGTTAAGAGGGAATCTTAGAATGTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: EKSPRQMKDRLY*IMLRGNLRMWT Trigger: GGTCCACATTCTAAGATTCCCTCTTAACATGATCCAATACAGTCTGTCTTTCATTTGTCTGGGGGATTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACAACACACAGCTTGTCTTaGGAACTCAAGAATGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTTHSLS*ELKNAS Trigger: TGAAGCATTCTTGAGTTCCAAAGACAAGCTGTGTGT...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | TCTACAATGCACATAAGAAGAATTATGTCTGTAGTATaGGACCCTTTAAGGCATCTCTTAGTGTTACCCATG | + |
|
Preference number: 3 (lower is better) Translates to: STMHIRRIMSVV*DPLRHLLVLPM Trigger: CATGGGTAACACTAAGAGATGCCTTAAAGGGTCCCATACTACAGACATAATTCTTCTTATGTGCATTGTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | TCGTTTGGCTTATACTTTCAGATAATGGTTCATCAATaGAGGAAGTCAGGACAGAAACTCAAACTCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFGLYFQIMVHQ*RKSGQKLKLSK Trigger: TTTGCTGAGTTTGAGTTTCTGTCCTGACTTCCTCCATTGATGAACCATTATCTGAAAGTATAAGCCAAACGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACAGATCAGGTAGCAGGTaGACTATATTGGACAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSNQSNVTYLGFTQELLDRSGSR*TILDNF Trigger: GAAATTGTCCAATATAGTCAACCTGCTACCTGATCT...GTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACAGCGAAATGACCAGGTaGTGCAAATATTTGCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: SSNQSNVTYLGFTQELLDSEMTR*CKYLLI Trigger: AATCAGCAAATATTTGCACAACCTGGTCATTTCGCT...GTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | TGTGGGGCATGGCTCTTGAGAAAGCAGTATATGCTTTaGATCACAATACAATATATGGTATGGTTTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: CGAWLLRKQYML*ITIQYMVWFFL Trigger: TAGGAAAAACCATACCATATATTGTATTGTGATTCAAAGCATATACTGCTTTCTCAAGAGCCATGCCCCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | AAATGCTGTTTAGCACCTTTGGCAGGCACCTATAAGTaGATAACAGAGGTAAAAATTTGGATTTGGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KCCLAPLAGTYK*ITEVKIWIWKQ Trigger: TTGCTTCCAAATCCAAATTTTTACCTCTGTTATTCACTTATAGGTGCCTGCCAAAGGTGCTAAACAGCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACATTAAGGTCATGCATTTaGTTTGGAAAGCGAAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTLRSCI*FGKRND Trigger: GTCATTTCGCTTTCCAAACAAAATGCATGACCTTAA...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR GCA 72 bp | GGTTATAAATATGAAGATACTTGTCTCCTATGCAAATaGTCATTGAAAGGTAAGTTCAGCAGAGGGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GYKYEDTCLLCK*SLKGKFSRGKV Trigger: AACTTTCCCTCTGCTGAACTTACCTTTCAATGAGCATTTGCATAGGAGACAAGTATCTTCATATTTATAACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | GATAGATATGTAGAAATGTCAAGAGAACTCTCAGATTaGTTCCCTAAATTGTGTAATGAGGGCTGTAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: DRYVEMSRELSD*FPKLCNEGCNS Trigger: ACTATTACAGCCCTCATTACACAATTTAGGGAACCAATCTGAGAGTTCTCTTGACATTTCTACATATCTATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR TCA 72 bp | AATATGAAGATACTTGTCTCCTATGCAAATGCTCATTaGAAGGTAAGTTCAGCAGAGGGAAAGTTCAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: NMKILVSYANAH*KVSSAEGKFNN Trigger: ATTATTGAACTTTCCCTCTGCTGAACTTACCTTTCAATGAGCATTTGCATAGGAGACAAGTATCTTCATATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR GCA 72 bp | TATATTGGTTATAAATATGAAGATACTTGTCTCCTATaGAAATGCTCATTGAAAGGTAAGTTCAGCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: YIGYKYEDTCLL*KCSLKGKFSRG Trigger: CCCTCTGCTGAACTTACCTTTCAATGAGCATTTGCATAGGAGACAAGTATCTTCATATTTATAACCAATATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CCA 72 bp | AAAGTGCAATTGTGTGTTCACAATTATGGAATCTATTaGTATTATCATGTTTCACACCACACCATCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KVQLCVHNYGIY*YYHVSHHTILK Trigger: CTTCAAGATGGTGTGGTGTGAAACATGATAATACCAATAGATTCCATAATTGTGAACACACAATTGCACTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 72 bp | TTGGCCCTGGTGTTCCCCTGTACTGAGGCAGATAGTTaGCATGACCAATGGGCCTCTCTTTCCACTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LALVFPCTEADS*HDQWASLSTDG Trigger: GCCATCAGTGGAAAGAGAGGCCCATTGGTCATGCAAACTATCTGCCTCAGTACAGGGGAACACCAGGGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR GCA 90 bp | CACTCAAGAACTTCTGGACACCTCCAAACAAAGCCCCTGGGTCACTTCTTCTCTCAGTGGCTTACATATTaGTACAAACCTGTCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: HSRTSGHLQTKPLGHFFSQWLTY*YKPVIS Trigger: GGATATGACAGGTTTGTAGCAATATGTAAGCCACTG...AGAGAAGAAGTGACCCAGGGGCTTTGTTTGGAGGTGTCCAGAAGTTCTTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCCTGGCAATAAGGTGTACAAAATAGAATGTTCTACTCACTATAACCCCATCACTACAGTGATGTaGGCCGTGAGTGTAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGPGNKVYKIECSTHYNPITTVM*AVSVER Trigger: CCTTTCTACACTCACGGCCCACATCACTGTAGTGAT...GGGGTTATAGTGAGTAGAACATTCTATTTTGTACACCTTATTGCCAGGACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 72 bp | TTGTCCACCAGCATGCTATTCCACACAGTATTGCTTTaGACAAAGGAATTCGCTTCAAAACCAGAAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTSMLFHTVLL*TKEFASKPEKC Trigger: GCACTTTTCTGGTTTTGAAGCGAATTCCTTTGTCAAAAGCAATACTGTGTGGAATAGCATGCTGGTGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR TCA 90 bp | TCATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACAAATGGCTCACAGAATaGAGGATACCTACTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSNQSNVTYLGFTQELLDKWLTE*RIPTAQ Trigger: TTGGGCAGTAGGTATCCTTCATTCTGTGAGCCATTT...GTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGTTCCCTAAATTGTGTAATGAGGGCTGTAATAGTAACAAAGACAAAATGGCTAGAGGACTGCCGTTaGACAGAGACCAAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: IGSLNCVMRAVIVTKTKWLEDCR*TETKMM Trigger: CATCATTTTGGTCTCTGTCCAACGGCAGTCCTCTAG...CCATTTTGTCTTTGTTACTATTACAGCCCTCATTACACAATTTAGGGAACCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 72 bp | CTTCCAAAACTAACATTTGTGGACCTACAGAATGATTaGTCCACCAGCATGCTATTCCACACAGTATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPKLTFVDLQND*STSMLFHTVLL Trigger: AAGCAATACTGTGTGGAATAGCATGCTGGTGGACAAATCATTCTGTAGGTCCACAAATGTTAGTTTTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR TCA 90 bp | AATTATGTCTGTAGTATGGGACCCTTTAAGGCATCTCTTAGTGTTACCCATGATGTAAAAAGCACAAGCTaGAGTCCCCAAGATTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NYVCSMGPFKASLSVTHDVKSTS*SPQDLE Trigger: TTCTAAATCTTGGGGACTTCAGCTTGTGCTTTTTAC...ATCATGGGTAACACTAAGAGATGCCTTAAAGGGTCCCATACTACAGACATAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 72 bp | CTGTGGGGCATGGCTCTTGAGAAAGCAGTATATGCTTaGAATCACAATACAATATATGGTATGGTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWGMALEKAVYA*NHNTIYGMVFP Trigger: AGGAAAAACCATACCATATATTGTATTGTGATTCAAAGCATATACTGCTTTCTCAAGAGCCATGCCCCACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 72 bp | AATGATTTGTCCACCAGCATGCTATTCCACACAGTATaGCTTTTGACAAAGGAATTCGCTTCAAAACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NDLSTSMLFHTV*LLTKEFASKPE Trigger: TTCTGGTTTTGAAGCGAATTCCTTTGTCAAAAGCAATACTGTGTGGAATAGCATGCTGGTGGACAAATCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 72 bp | ATATGTCATATGACAAGCCAGAGATCAGGTAGCAGGTaGACTATATTGGACAATTTCCTTCATGACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ICHMTSQRSGSR*TILDNFLHDSN Trigger: GTTACTGTCATGAAGGAAATTGTCCAATATAGTCAACCTGCTACCTGATCTCTGGCTTGTCATATGACATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 72 bp | TTATGGTCATCTTGTGATACTGGCATCTACAAAATTTaGAGGTCTTCTTTTGCAACTGACCTTTGCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSSCDTGIYKI*RSSFATDLCFP Trigger: GGGAAAGCAAAGGTCAGTTGCAAAAGAAGACCTCAAAATTTTGTAGATGCCAGTATCACAAGATGACCATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR TCA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACAAGGAGAGTTCAAGTGTaGATCAGAGAAAATGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTRRVQV*IRENDD Trigger: GTCATCATTTTCTCTGATTCACACTTGAACTCTCCT...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| 3UTR CAA 72 bp | CTGATTGCAGCTTTAGTACCAGATATGTGCTCTTATTaGAGCAGATTAACACATATCCTGGTACATTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LIAALVPDMCSY*SRLTHILVHCM Trigger: CATACAATGTACCAGGATATGTGTTAATCTGCTCAAATAAGAGCACATATCTGGTACTAAAGCTGCAATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR CCA 90 bp | AATTATGTCTGTAGTATGGGACCCTTTAAGGCATCTCTTAGTGTTACCCATGATGTAAAGGTGTACAAATaGTATAGAAGACAGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NYVCSMGPFKASLSVTHDVKVYK*YRRQKG Trigger: TCCTTTCTGTCTTCTATACCATTTGTACACCTTTAC...ATCATGGGTAACACTAAGAGATGCCTTAAAGGGTCCCATACTACAGACATAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR CCA 90 bp | TCATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACGTGGCAAAGTTAGATTaGCAGATGTCAATAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSNQSNVTYLGFTQELLDVAKLD*QMSINE Trigger: TTCATTTATTGACATCTGCCAATCTAACTTTGCCAC...GTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTCAAGGTGTAGCATCACCCACAGTAGTGGGGCCCTCTCTCATCAATCACAGTGTAGAAAGGGCTTaGGATGACCCACTAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ICQGVASPTVVGPSLINHSVERA*DDPLED Trigger: GTCCTCTAGTGGGTCATCCAAAGCCCTTTCTACACT...GTGATTGATGAGAGAGGGCCCCACTACTGTGGGTGATGCTACACCTTGACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
||
| CDS-3UTR CAA 90 bp | CATCAAATCAAAGCAATGTTACATATCTGGGATTCACTCAAGAACTTCTGGACAACTAGAGGACTGCCGTaGGACAGAGACCAAAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: HQIKAMLHIWDSLKNFWTTRGLP*DRDQND Trigger: ATCATTTTGGTCTCTGTCCAACGGCAGTCCTCTAGT...TGTCCAGAAGTTCTTGAGTGAATCCCAGATATGTAACATTGCTTTGATTTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213685.2 |
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