RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR716 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073896

Ensembl transcript IDs: ENSMUST00000098137.3, ENSMUST00000210474.2, ENSMUST00000213367.3, ENSMUST00000214819.3, ENSMUST00000215284.3, ENSMUST00000216871.3

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACAAGGTGATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTaGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: YKVMLSPESWGQSPF*RPTLLWQGRCPEVW
Trigger: CCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACCTTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 90 bp GCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCTaGCCAAGGAGCTGTGTTGCTTCTGTATCCCACATGGTCTCCTGT +
Preference number: 1 (lower is better)
Translates to: AQLCLLAEVEGLKGP*PRSCVASVSHMVSC
Trigger: ACAGGAGACCATGTGGGATACAGAAGCAACACAGCTCCTTGGTCAGGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 90 bp AGAGGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTaGAGGGACCCTGACCAAGGAGCTGTGTTGCTTCTGTATCCCACA +
Preference number: 1 (lower is better)
Translates to: RGLELSSASWLKLKA*RDPDQGAVLLLYPT
Trigger: TGTGGGATACAGAAGCAACACAGCTCCTTGGTCAGGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 90 bp TGGGAGTCCAGCTCTCTCCTGAGTCTCAGTGATCAGAGCACTCTCTaGAGGCAAGTTCTCCTTTTTCTTGCAGTGAAGGTGCACAGAGGT +
Preference number: 1 (lower is better)
Translates to: WESSSLLSLSDQSTL*RQVLLFLAVKVHRG
Trigger: ACCTCTGTGCACCTTCACTGCAAGAAAAAGGAGAACTTGCCTGCAGAGAGTGCTCTGATCACTGAGACTCAGGAGAGAGCTGGACTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 90 bp GCAGGAGCTGATGCAGAAGCCATGGAGGGGTGTTGCTTACTGACTTaGTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTGATCCTAGGA +
Preference number: 1 (lower is better)
Translates to: AGADAEAMEGCCLLT*SSWLAQPASLLILG
Trigger: TCCTAGGATCAATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 90 bp AACTCAAATTGGGCAGGAGCTGATGCAGAAGCCATGGAGGGGTGTTaGTTACTGACTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTTTA +
Preference number: 1 (lower is better)
Translates to: NSNWAGADAEAMEGC*LLTCSSWLAQPASL
Trigger: TAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 90 bp AAGAACTCATGTTACACTTTTATGGAACTCAAATTGGGCAGGAGCTaGTGCAGAAGCCATGGAGGGGTGTTGCTTACTGACTTGCTCTTC +
Preference number: 1 (lower is better)
Translates to: KNSCYTFMELKLGRS*CRSHGGVLLTDLLF
Trigger: GAAGAGCAAGTCAGTAAGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATAAAAGTGTAACATGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 90 bp ATCTATACTGGATCTTCACTGGGACTTTTCTGTATATCCTGTTACTaGCCTGTGTTGTGGAAATCCTGCAGCTTTGGACCTGTGGCCCTT +
Preference number: 1 (lower is better)
Translates to: IYTGSSLGLFCISCY*PVLWKSCSFGPVAL
Trigger: AAGGGCCACAGGTCCAAAGCTGCAGGATTTCCACAACACAGGTCAGTAACAGGATATACAGAAAAGTCCCAGTGAAGATCCAGTATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 90 bp AATGAGCAGAGAAGAACTCATGTTACACTTTTATGGAACTCAAATTaGGCAGGAGCTGATGCAGAAGCCATGGAGGGGTGTTGCTTACTG +
Preference number: 1 (lower is better)
Translates to: NEQRRTHVTLLWNSN*AGADAEAMEGCCLL
Trigger: CAGTAAGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATAAAAGTGTAACATGAGTTCTTCTCTGCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 90 bp CTCATGCCTATAAATGAGCAGAGAAGAACTCATGTTACACTTTTATaGAACTCAAATTGGGCAGGAGCTGATGCAGAAGCCATGGAGGGG +
Preference number: 1 (lower is better)
Translates to: LMPINEQRRTHVTLL*NSNWAGADAEAMEG
Trigger: CCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATAAAAGTGTAACATGAGTTCTTCTCTGCTCATTTATAGGCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 90 bp CCTGTTACTGACCTGTGTTGTGGAAATCCTGCAGCTTTGGACCTGTaGCCCTTTTACATGCTTCAGAAGATAATAAATGTTTCCCAGGGT +
Preference number: 1 (lower is better)
Translates to: PVTDLCCGNPAALDL*PFYMLQKIINVSQG
Trigger: ACCCTGGGAAACATTTATTATCTTCTGAAGCATGTAAAAGGGCCACAGGTCCAAAGCTGCAGGATTTCCACAACACAGGTCAGTAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 90 bp CTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGTGGTCTTaGTTTCTGTTATTAAGATTCTTAGGTTTGCATTTTGCCTTCTGG +
Preference number: 1 (lower is better)
Translates to: LAEVGVLEFDDAEWS*FLLLRFLGLHFAFW
Trigger: CCAGAAGGCAAAATGCAAACCTAAGAATCTTAATAACAGAAACCAAGACCACTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 90 bp TCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTaGGACTTTTCTGTATATCCTGTTACTGACCTGTGTTGTGGAAAT +
Preference number: 1 (lower is better)
Translates to: SRSLAFRTLSILDLH*DFSVYPVTDLCCGN
Trigger: ATTTCCACAACACAGGTCAGTAACAGGATATACAGAAAAGTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 90 bp GGAGGCCATCATATTTTTATTGAGACCCTAATTTGTGGTAGGTTCTaGTCTAGATATTGGAAATTCAATAGTGAACCCACAAAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: GGHHIFIETLICGRF*SRYWKFNSEPTKER
Trigger: TCTTTCCTTTGTGGGTTCACTATTGAATTTCCAATATCTAGACCAGAACCTACCACAAATTAGGGTCTCAATAAAAATATGATGGCCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCAGCTCCAATTCCTGGCTaGGTCCTGGGGTCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: FWRPTLLWQGRCPEVWVSAPIPG*VLGSES
Trigger: GGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGC...TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp CTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCTGGCAGGGAATTCCTGGCTGAGTCCTaGGGTCAGAGTCCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LSPGVRALSGGRLSSGREFLAES*GQSPPW
Trigger: CCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAA...TTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTCCTCCCTGGAGGCCAGCACACTGGGATTTaGGGCATGTGCCAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: GLSSNSWLSPGVRVLPGGQHTGI*GMCQQL
Trigger: AAGCTGCTGGCACATGCCTCAAATCCCAGTGTGCTG...GCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCAAAATTGGGCAGGAGCTaGTGCAGAAGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: FWRPTLLWQGRCPEVWVSKLGRS*CRSHGG
Trigger: CCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTT...TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCGCTCCAATTCCTGGCTaGGTCCTGGGGTCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCAPIPG*VLGSES
Trigger: GGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGC...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp AGGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCAAATTGGGCAGGAGCTaGTGCAGAAGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: RSGAQLCLLAEVEGLKGPKLGRS*CRSHGG
Trigger: CCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTT...GGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp AGGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCAGGTGCCCAGAGGTCTaGGTCTCAGCTCCAATTCCT +
Preference number: 2 (lower is better)
Translates to: RSGAQLCLLAEVEGLKGPRCPEV*VSAPIP
Trigger: AGGAATTGGAGCTGAGACCCAGACCTCTGGGCACCT...GGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCAGGTGCCCAGAGGTCTaGGTCTCAGCTCCAATTCCT +
Preference number: 2 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLRCPEV*VSAPIP
Trigger: AGGAATTGGAGCTGAGACCCAGACCTCTGGGCACCT...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTCCTCCCTGGAGGCGTAGCAGAGCAGCTTTaGCTACTTGCAAGCAACCCT +
Preference number: 2 (lower is better)
Translates to: GLSSNSWLSPGVRVLPGGVAEQL*LLASNP
Trigger: AGGGTTGCTTGCAAGTAGTCAAAGCTGCTCTGCTAC...GCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGGGTGATGCTCTCACCTaGGTCCTGGGGTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAEGDALT*VLGSEP
Trigger: GGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACC...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GACCCTGGGTACAAGGTGATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCCTCAGCTCCAATTCCTaGCTGAGTCCTGGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: DPGYKVMLSPESWGQSPFLSSNS*LSPGVR
Trigger: TCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAG...GAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACCTTGTACCCAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCGACATTTTAGTGACGTaGTTGCTTGGGGGCCACCTA +
Preference number: 2 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLDILVT*LLGGHL
Trigger: TAGGTGGCCCCCAAGCAATCACGTCACTAAAATGTC...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATCTCTGGCAGGGAAGGTaGCCAGAGGTCTGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDLWQGR*PEVWVS
Trigger: TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAG...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp AGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTCCTCCCTGGAGGCCATCATGACATTTTAGTGACGTaGTTGCTTGGGGGCCACCTA +
Preference number: 2 (lower is better)
Translates to: SSNSWLSPGVRVLPGGHHDILVT*LLGGHL
Trigger: TAGGTGGCCCCCAAGCAATCACGTCACTAAAATGTC...ATGATGGCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCGTAGCAGAGCAGCTTTaGCTACTTGCAAGCAACCCT +
Preference number: 2 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCVAEQL*LLASNP
Trigger: AGGGTTGCTTGCAAGTAGTCAAAGCTGCTCTGCTAC...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCACAGCAGCTTTGGCTATaGTTATGTCTAAACTGGGTC +
Preference number: 2 (lower is better)
Translates to: FWRPTLLWQGRCPEVWVSQQLWL*LCLNWV
Trigger: GACCCAGTTTAGACATAAGCATAGCCAAAGCTGCTG...TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCATGTGGAAGGTAAATTaGAGTGTGGTGGTGGAGACT +
Preference number: 2 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLMWKVN*SVVVET
Trigger: AGTCTCCACCACCACACTTCAATTTACCTTCCACAT...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCCAATTCTTCCTGAAATaGCTCGGAAAAATCCTGCCC +
Preference number: 2 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLQFFLK*LGKILP
Trigger: GGGCAGGATTTTTCCGAGGCATTTCAGGAAGAATTG...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCCAGCAGCTTTGGCTATaGTTATGTCTAAACTGGGTC +
Preference number: 2 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLQQLWL*LCLNWV
Trigger: GACCCAGTTTAGACATAAGCATAGCCAAAGCTGCTG...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCGGAGACTCCTATTTATaGTGCTACAAGGAAGTGATC +
Preference number: 2 (lower is better)
Translates to: FLEADSPLAGKVPRGLGLGDSYL*CYKEVI
Trigger: GATCACTTCCTTGTAGCAGCATAAATAGGAGTCTCC...GAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp GCCCAGAGGTCTGGGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTGATGCCAGGCACTCTTaGCTATACTTTCCTCTCATT +
Preference number: 2 (lower is better)
Translates to: AQRSGSQLQFLAESWGQSDARHS*LYFPLI
Trigger: AATGAGAGGAAAGTATAGGCAAGAGTGCCTGGCATC...ACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACCCAGACCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCATGTGCCAGCAGCTTTaGCTATGCTTATGTCTAAAC +
Preference number: 2 (lower is better)
Translates to: FLEADSPLAGKVPRGLGLMCQQL*LCLCLN
Trigger: GTTTAGACATAAGCATAGCCAAAGCTGCTGGCACAT...GAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCTTATGGAACTCAAATTaGGCAGGAGCTGATGCAGAA +
Preference number: 2 (lower is better)
Translates to: FLEADSPLAGKVPRGLGLLWNSN*AGADAE
Trigger: TTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATAA...GAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp CTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCTGGCAGGGAATTATGGAACTCAAATTaGGCAGGAGCTGATGCAGAA +
Preference number: 2 (lower is better)
Translates to: LSPGVRALSGGRLSSGRELWNSN*AGADAE
Trigger: TTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATAA...TTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGCTCAGCTCCAATTCCTaGCTGAGTCCTGGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAELSSNS*LSPGVR
Trigger: TCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAG...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGAGGTGCCCAGAGGTCTaGGTCTCAGCTCCAATTCCT +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAERCPEV*VSAPIP
Trigger: AGGAATTGGAGCTGAGACCCAGACCTCTGGGCACCT...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TATGGAACTCAAATTGGGCAGGAGCTGATGCAGAAGCCATGGAGGGGTGTTGCTCAGCACACTGGGATTTaGGGCATGTGCCAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: YGTQIGQELMQKPWRGVAQHTGI*GMCQQL
Trigger: AAGCTGCTGGCACATGCCTCAAATCCCAGTGTGCTG...AGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTCCTCCCTGGAGGCAAGCAATTTCTCAGTTaGGTTTCCTTCCCCTCAAAT +
Preference number: 2 (lower is better)
Translates to: GLSSNSWLSPGVRVLPGGKQFLS*VSFPSN
Trigger: ATTTGAGGGGAAGGAAACTCAACTGAGAAATTGCTT...GCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCATGTGGAAGGTAAATTaGAGTGTGGTGGTGGAGACT +
Preference number: 2 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCMWKVN*SVVVET
Trigger: AGTCTCCACCACCACACTTCAATTTACCTTCCACAT...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp AGGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCGCCTCGGAAAAATCCTaGCCCATTTTCAAAGATGTT +
Preference number: 2 (lower is better)
Translates to: RSGAQLCLLAEVEGLKGPASEKS*PIFKDV
Trigger: AACATCTTTGAAAATGGGGCAGGATTTTTCCGAGGC...GGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCGGAGACTCCTATTTATaGTGCTACAAGGAAGTGATC +
Preference number: 2 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLGDSYL*CYKEVI
Trigger: GATCACTTCCTTGTAGCAGCATAAATAGGAGTCTCC...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GCCCAGAGGTCTGGGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTATGTGCCAGCAGCTTTaGCTATGCTTATGTCTAAAC +
Preference number: 2 (lower is better)
Translates to: AQRSGSQLQFLAESWGQSMCQQL*LCLCLN
Trigger: GTTTAGACATAAGCATAGCCAAAGCTGCTGGCACAT...ACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACCCAGACCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCGGTCAGAGTCCTCCCTaGAGGCCATCATATTTTTAT +
Preference number: 2 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCGQSPP*RPSYFY
Trigger: ATAAAAATATGATGGCCTCCAGGGAGGACTCTGACC...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp AGGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCACTCATGCCTATAAATaGGCAGAGAAGAACTCATGT +
Preference number: 2 (lower is better)
Translates to: RSGAQLCLLAEVEGLKGPTHAYK*AEKNSC
Trigger: ACATGAGTTCTTCTCTGCTCATTTATAGGCATGAGT...GGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GCCCAGAGGTCTGGGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTACTCATGCCTATAAATaGGCAGAGAAGAACTCATGT +
Preference number: 2 (lower is better)
Translates to: AQRSGSQLQFLAESWGQSTHAYK*AEKNSC
Trigger: ACATGAGTTCTTCTCTGCTCATTTATAGGCATGAGT...ACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACCCAGACCTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGACATTTTAGTGACGTaGTTGCTTGGGGGCCACCTA +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDDILVT*LLGGHL
Trigger: TAGGTGGCCCCCAAGCAATCACGTCACTAAAATGTC...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGTCCTTTTTCTTGCAGTaGAGGTGCACAGAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAESFFLQ*RCTEVW
Trigger: CCAGACCTCTGTGCACCTTCACTGCAAGAAAAAGGA...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp AGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTCCTCCCTGGAGGCCATCATGCCTCGGAAAAATCCTaGCCCATTTTCAAAGATGTT +
Preference number: 2 (lower is better)
Translates to: SSNSWLSPGVRVLPGGHHASEKS*PIFKDV
Trigger: AACATCTTTGAAAATGGGGCAGGATTTTTCCGAGGC...ATGATGGCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCGCCTCGGAAAAATCCTaGCCCATTTTCAAAGATGTT +
Preference number: 2 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCASEKS*PIFKDV
Trigger: AACATCTTTGAAAATGGGGCAGGATTTTTCCGAGGC...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCTTATGGAACTCAAATTaGGCAGGAGCTGATGCAGAA +
Preference number: 2 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCLWNSN*AGADAE
Trigger: TTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATAA...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GACCCTGGGTACAAGGTGATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCATTGAAGTGTGGTGGTaGAGACTCCTATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: DPGYKVMLSPESWGQSPFIEVWW*RLLFML
Trigger: CAGCATAAATAGGAGTCTCCACCACCACACTTCAAT...GAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACCTTGTACCCAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCCCTCTACCAGCTTCATaGGATATGATTTTAATCCCA +
Preference number: 2 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCPLPAS*DMILIP
Trigger: TGGGATTAAAATCATATCTCATGAAGCTGGTAGAGG...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTCCTCCCTGGAGGCTTCTGGTCTAGATATTaGAAATTCAATAGTGAACCC +
Preference number: 2 (lower is better)
Translates to: GLSSNSWLSPGVRVLPGGFWSRY*KFNSEP
Trigger: GGGTTCACTATTGAATTTCCAATATCTAGACCAGAA...GCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp CAACCTAGGGCTTGTCCACACAATGGGATGGGCCATCCCATATTACTAATTAAGCAGCACACTGGGATTTaGGGCATGTGCCAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: QPRACPHNGMGHPILLIKQHTGI*GMCQQL
Trigger: AAGCTGCTGGCACATGCCTCAAATCCCAGTGTGCTG...CTTAATTAGTAATATGGGATGGCCCATCCCATTGTGTGGACAAGCCCTAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp GTCCATAGGTTAGATTGGAGATGCCAGGCACTCTTGCCTATACTTTCCTCTCATAAATTGGGCAGGAGCTaGTGCAGAAGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: VHRLDWRCQALLPILSSHKLGRS*CRSHGG
Trigger: CCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTT...ATGAGAGGAAAGTATAGGCAAGAGTGCCTGGCATCTCCAATCTAACCTATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGATGTGGAAGGTAAATTaGAGTGTGGTGGTGGAGACT +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAEMWKVN*SVVVET
Trigger: AGTCTCCACCACCACACTTCAATTTACCTTCCACAT...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGAGGTGATGCTCTCACCTaGGTCCTGGGGTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGGDALT*VLGSEP
Trigger: GGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACC...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGCAGCAGCTTTGGCTATaGTTATGTCTAAACTGGGTC +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAEQQLWL*LCLNWV
Trigger: GACCCAGTTTAGACATAAGCATAGCCAAAGCTGCTG...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGGATGCCAGGCACTCTTaGCTATACTTTCCTCTCATT +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAEDARHS*LYFPLI
Trigger: AATGAGAGGAAAGTATAGGCAAGAGTGCCTGGCATC...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGTGCTCTGGCTTAGAGTaGTCACCATTTCCACAATGT +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAECSGLE*SPFPQC
Trigger: ACATTGTGGAAATGGTGACCACTCTAAGCCAGAGCA...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGGTCAGAGTCCTCCCTaGAGGCCATCATATTTTTAT +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDGQSPP*RPSYFY
Trigger: ATAAAAATATGATGGCCTCCAGGGAGGACTCTGACC...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGGGTCAGAGTCCTCCCTaGAGGCCATCATATTTTTAT +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAEGQSPP*RPSYFY
Trigger: ATAAAAATATGATGGCCTCCAGGGAGGACTCTGACC...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACGGTCAGAGCCCTTTCTaGAGGCCGACTCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDGQSPF*RPTLLW
Trigger: CCAGAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACC...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCGATGCTGAGTGGTCTTaGTTTCTGTTATTAAGATTC +
Preference number: 2 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCDAEWS*FLLLRF
Trigger: GAATCTTAATAACAGAAACCAAGACCACTCAGCATC...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TGTTGCTTACTGACTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTGATCCAGCACACTGGGATTTaGGGCATGTGCCAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: CCLLTCSSWLAQPASLLIQHTGI*GMCQQL
Trigger: AAGCTGCTGGCACATGCCTCAAATCCCAGTGTGCTG...GATCAATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGGAGACTCCTATTTATaGTGCTACAAGGAAGTGATC +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDGDSYL*CYKEVI
Trigger: GATCACTTCCTTGTAGCAGCATAAATAGGAGTCTCC...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACTCTGGCAGGGAAGGTaGCCAGAGGTCTGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGLWQGR*PEVWVS
Trigger: TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAG...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TATGGAACTCAAATTGGGCAGGAGCTGATGCAGAAGCCATGGAGGGGTGTTGCTTGCTCTGGCTTAGAGTaGTCACCATTTCCACAATGT +
Preference number: 2 (lower is better)
Translates to: YGTQIGQELMQKPWRGVACSGLE*SPFPQC
Trigger: ACATTGTGGAAATGGTGACCACTCTAAGCCAGAGCA...AGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATATTGAAGTGTGGTGGTaGAGACTCCTATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDIEVWW*RLLFML
Trigger: CAGCATAAATAGGAGTCTCCACCACCACACTTCAAT...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GACCCTGGGTACAAGGTGATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCATTTGTGGTAGGTTCTaGTCTAGATATTGGAAATTC +
Preference number: 2 (lower is better)
Translates to: DPGYKVMLSPESWGQSPFICGRF*SRYWKF
Trigger: GAATTTCCAATATCTAGACCAGAACCTACCACAAAT...GAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACCTTGTACCCAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGAGGTCAGAGCCCTTTCTaGAGGCCGACTCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGGQSPF*RPTLLW
Trigger: CCAGAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACC...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACCTCTCACCTGAGTCCTaGGGTCAGAGCCCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDLSPES*GQSPFW
Trigger: CCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAG...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATACTCATGCCTATAAATaGGCAGAGAAGAACTCATGT +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDTHAYK*AEKNSC
Trigger: ACATGAGTTCTTCTCTGCTCATTTATAGGCATGAGT...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTGGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCAGCTCCAATTCCTGGCTaGGTCCTGGGGTCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: LVCFKVFSFQDTIYTGSSAPIPG*VLGSES
Trigger: GGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGC...TGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATCTTAGGTTTGCATTTTaGCTTCTGGTAATCTCTGGT +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDLRFAF*LLVISG
Trigger: ACCAGAGATTACCAGAAGGCAAAATGCAAACCTAAG...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGCTTAGGTTTGCATTTTaGCTTCTGGTAATCTCTGGT +
Preference number: 2 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAELRFAF*LLVISG
Trigger: ACCAGAGATTACCAGAAGGCAAAATGCAAACCTAAG...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATTTTGTCAATTTGCTCTaGCTTAGAGTGGTCACCATT +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDFVNLL*LRVVTI
Trigger: AATGGTGACCACTCTAAGCCAGAGCAAATTGACAAA...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TATGGAACTCAAATTGGGCAGGAGCTGATGCAGAAGCCATGGAGGGGTGTTGCTATGTGCCAGCAGCTTTaGCTATGCTTATGTCTAAAC +
Preference number: 2 (lower is better)
Translates to: YGTQIGQELMQKPWRGVAMCQQL*LCLCLN
Trigger: GTTTAGACATAAGCATAGCCAAAGCTGCTGGCACAT...AGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATTGTTTTAACTGTCTCTaGCTGGAGTTTGTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: LGVLGSPGLAEVGVLEFDCFNCL*LEFVLP
Trigger: AGGAAGAACAAACTCCAGCCAGAGACAGTTAAAACA...ATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGTCTCCTGAGTCTCAGTaGTCAGAGCACTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: FCLLVISGVSCFNCLWLESPESQ*SEHSLQ
Trigger: CTGCAGAGAGTGCTCTGATCACTGAGACTCAGGAGA...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACTCTGGAGCTCAGCTCTaGCTCCTGGCTGAAGTTGAA +
Preference number: 2 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDSGAQL*LLAEVE
Trigger: TTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGA...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACGTCTCTGAGAGACCCTaGGTACAAGGTGATGCTCTC +
Preference number: 2 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDVSERP*VQGDAL
Trigger: GAGAGCATCACCTTGTACCCAGGGTCTCTCAGAGAC...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGGACATTTTAGTGACGTaGTTGCTTGGGGGCCACCTA +
Preference number: 2 (lower is better)
Translates to: FCLLVISGVSCFNCLWLEDILVT*LLGGHL
Trigger: TAGGTGGCCCCCAAGCAATCACGTCACTAAAATGTC...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGATCTCCTGAGTCTCAGTaGTCAGAGCACTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGSPESQ*SEHSLQ
Trigger: CTGCAGAGAGTGCTCTGATCACTGAGACTCAGGAGA...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACGCCATGGAGGGGTGTTaGTTACTGACTTGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDAMEGC*LLTCSS
Trigger: TGAAGAGCAAGTCAGTAAGCAACACCCCTCCATGGC...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGACCAAGGAGCTGTGTTaGTTCTGTATCCCACATGGT +
Preference number: 2 (lower is better)
Translates to: FCLLVISGVSCFNCLWLETKELC*FCIPHG
Trigger: ACCATGTGGGATACAGAAGCAACACAGCTCCTTGGT...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACTTCTGTATCCCACATaGTCTCCTGTGGTGACTGGT +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGLLYPT*SPVVTG
Trigger: ACCAGTCACCACAGGAGACCATGTGGGATACAGAAG...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGTGCTCTGGCTTAGAGTaGTCACCATTTCCACAATGT +
Preference number: 2 (lower is better)
Translates to: FCLLVISGVSCFNCLWLECSGLE*SPFPQC
Trigger: ACATTGTGGAAATGGTGACCACTCTAAGCCAGAGCA...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGGCCTCGGAAAAATCCTaGCCCATTTTCAAAGATGTT +
Preference number: 2 (lower is better)
Translates to: FCLLVISGVSCFNCLWLEASEKS*PIFKDV
Trigger: AACATCTTTGAAAATGGGGCAGGATTTTTCCGAGGC...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACAGCAGCTTTGGCTATaGTTATGTCTAAACTGGGTC +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGQQLWL*LCLNWV
Trigger: GACCCAGTTTAGACATAAGCATAGCCAAAGCTGCTG...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGAGATGCCAGGCACTCTTaGCTATACTTTCCTCTCATT +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGDARHS*LYFPLI
Trigger: AATGAGAGGAAAGTATAGGCAAGAGTGCCTGGCATC...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGAGGAGACTCCTATTTATaGTGCTACAAGGAAGTGATC +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGGDSYL*CYKEVI
Trigger: GATCACTTCCTTGTAGCAGCATAAATAGGAGTCTCC...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TTGGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCAGATCAGAGCACTCTCTaGAGGCAAGTTCTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: LVCFKVFSFQDTIYTGSSDQSTL*RQVLLF
Trigger: AAAAAGGAGAACTTGCCTGCAGAGAGTGCTCTGATC...TGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGAATGTGCCAGCAGCTTTaGCTATGCTTATGTCTAAAC +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGMCQQL*LCLCLN
Trigger: GTTTAGACATAAGCATAGCCAAAGCTGCTGGCACAT...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CAA 90 bp TCTTGTGAGGTGGTAAGACAATACATACAATATGTGGAAGGTAAATaGAAGTGTGGTGGTGGAGACTCCTATTTATGCTGCTACAAGGAA +
Preference number: 2 (lower is better)
Translates to: SCEVVRQYIQYVEGK*KCGGGDSYLCCYKE
Trigger: TTCCTTGTAGCAGCATAAATAGGAGTCTCCACCACCACACTTCAATTTACCTTCCACATATTGTATGTATTGTCTTACCACCTCACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACCTCTACCAGCTTCATaGGATATGATTTTAATCCCA +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGPLPAS*DMILIP
Trigger: TGGGATTAAAATCATATCTCATGAAGCTGGTAGAGG...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR GCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACTTAGGTTTGCATTTTaGCTTCTGGTAATCTCTGGT +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGLRFAF*LLVISG
Trigger: ACCAGAGATTACCAGAAGGCAAAATGCAAACCTAAG...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGATTTGTCAATTTGCTCTaGCTTAGAGTGGTCACCATT +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGFVNLL*LRVVTI
Trigger: AATGGTGACCACTCTAAGCCAGAGCAAATTGACAAA...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGCATGTTACACTTTTATaGAACTCAAATTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: FCLLVISGVSCFNCLWLEHVTLL*NSNWAG
Trigger: TCCTGCCCAATTTGAGTTCCATAAAAGTGTAACATG...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TTGGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCAATTGAAGTGTGGTGGTaGAGACTCCTATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: LVCFKVFSFQDTIYTGSSIEVWW*RLLFML
Trigger: CAGCATAAATAGGAGTCTCCACCACCACACTTCAAT...TGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGAAGAGTTGTCTCCCTTTaGGTTTTCTTCATTGTTTCT +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGRVVSL*VFFIVS
Trigger: AGAAACAATGAAGAAAACTCAAAGGGAGACAACTCT...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACATTTGTGGTAGGTTCTaGTCTAGATATTGGAAATTC +
Preference number: 2 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDICGRF*SRYWKF
Trigger: GAATTTCCAATATCTAGACCAGAACCTACCACAAAT...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACTTTGATGATGCTGAGTaGTCTTGGTTTCTGTTATTA +
Preference number: 2 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDFDDAE*SWFLLL
Trigger: TAATAACAGAAACCAAGACCACTCAGCATCATCAAA...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR TCA 90 bp TTGGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCAAGCAGTGTTTTCCTGTaGTTCTTTAAGGGATTTTTG +
Preference number: 2 (lower is better)
Translates to: LVCFKVFSFQDTIYTGSSSSVFL*FFKGFL
Trigger: CAAAAATCCCTTAAAGAATCACAGGAAAACACTGCT...TGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CCA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGATTTGATGATGCTGAGTaGTCTTGGTTTCTGTTATTA +
Preference number: 2 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGFDDAE*SWFLLL
Trigger: TAATAACAGAAACCAAGACCACTCAGCATCATCAAA...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp TGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCTaGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: WGQSPFWRPTLL*QGRCPEVWVSA
Trigger: AGCTGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp TGCCCAGAGGTCTGGGTCTCAGCTCCAATTCCTGGCTaGGTCCTGGGGTCAGAGTCCTCCCTGGAGGCCATC +
Preference number: 3 (lower is better)
Translates to: CPEVWVSAPIPG*VLGSESSLEAI
Trigger: GATGGCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACCCAGACCTCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTaGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCA +
Preference number: 3 (lower is better)
Translates to: MLSPESWGQSPF*RPTLLWQGRCP
Trigger: TGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp GACCCTGGGTACAAGGTGATGCTCTCACCTGAGTCCTaGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTC +
Preference number: 3 (lower is better)
Translates to: DPGYKVMLSPES*GQSPFWRPTLL
Trigger: GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACCTTGTACCCAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCAACAGCACACTGGGATTaGAGGCATGTGCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: FWRPTLLWQGRCPEVWVSTAHWD*RHVPAA
Trigger: AGCTGCTGGCACATGCCTCAAATCCCAGTGTGCTGT...TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp TCTGAGAGACCCTGGGTACAAGGTGATGCTCTCACCTaGGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGAC +
Preference number: 3 (lower is better)
Translates to: SERPWVQGDALT*VLGSEPFLEAD
Trigger: GTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACCTTGTACCCAGGGTCTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 72 bp TGCAGTGAAGGTGCACAGAGGTCTGGAGCTCAGCTCTaGCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCC +
Preference number: 3 (lower is better)
Translates to: CSEGAQRSGAQL*LLAEVEGLKGP
Trigger: GGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCTCTGTGCACCTTCACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCACTTGCTCTTCATGGCTaGCTCAGCCTGCTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: FWRPTLLWQGRCPEVWVSLALHG*LSLLLY
Trigger: ATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAG...TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp GCTTCTGTCAGCACTCCTGGGAGTCCAGCTCTCTCCTaGGTCTCAGTGATCAGAGCACTCTCTGCAGGCAAG +
Preference number: 3 (lower is better)
Translates to: ASVSTPGSPALS*VSVIRALSAGK
Trigger: CTTGCCTGCAGAGAGTGCTCTGATCACTGAGACTCAGGAGAGAGCTGGACTCCCAGGAGTGCTGACAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCCTTGCTCTTCATGGCTaGCTCAGCCTGCTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLLALHG*LSLLLY
Trigger: ATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAG...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp TGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCTaGCCAAGGAGCTGTGTTGCTTCTGTATCCCACATG +
Preference number: 3 (lower is better)
Translates to: CLLAEVEGLKGP*PRSCVASVSHM
Trigger: CATGTGGGATACAGAAGCAACACAGCTCCTTGGTCAGGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 72 bp TGGGCAGGAGCTGATGCAGAAGCCATGGAGGGGTGTTaGTTACTGACTTGCTCTTCATGGCTTGCTCAGCCT +
Preference number: 3 (lower is better)
Translates to: WAGADAEAMEGC*LLTCSSWLAQP
Trigger: AGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp AGGTCTGGGTCTCAGCTCCAATTCCTGGCTGAGTCCTaGGGTCAGAGTCCTCCCTGGAGGCCATCATATTTT +
Preference number: 3 (lower is better)
Translates to: RSGSQLQFLAES*GQSPPWRPSYF
Trigger: AAAATATGATGGCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACCCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp CTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGAATTCTCTACAGGTTaGTCTACAGCCAATCCTTAC +
Preference number: 3 (lower is better)
Translates to: LSPGVRALSGGRLSSGREEFSTG*STANPY
Trigger: GTAAGGATTGGCTGTAGACAAACCTGTAGAGAATTC...TTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp GCACTCTCTGCAGGCAAGTTCTCCTTTTTCTTGCAGTaGAGGTGCACAGAGGTCTGGAGCTCAGCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: ALSAGKFSFFLQ*RCTEVWSSALP
Trigger: AGGCAGAGCTGAGCTCCAGACCTCTGTGCACCTTCACTGCAAGAAAAAGGAGAACTTGCCTGCAGAGAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp GTTGCTTCTGTATCCCACATGGTCTCCTGTGGTGACTaGTCTCTGAGAGACCCTGGGTACAAGGTGATGCTC +
Preference number: 3 (lower is better)
Translates to: VASVSHMVSCGD*SLRDPGYKVML
Trigger: GAGCATCACCTTGTACCCAGGGTCTCTCAGAGACCAGTCACCACAGGAGACCATGTGGGATACAGAAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp GAGCTGATGCAGAAGCCATGGAGGGGTGTTGCTTACTaGCTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: ELMQKPWRGVAY*LALHGLLSLLL
Trigger: AAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACACCCCTCCATGGCTTCTGCATCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp GACCCTGGGTACAAGGTGATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCGAATTCTCTACAGGTTaGTCTACAGCCAATCCTTAC +
Preference number: 3 (lower is better)
Translates to: DPGYKVMLSPESWGQSPFEFSTG*STANPY
Trigger: GTAAGGATTGGCTGTAGACAAACCTGTAGAGAATTC...GAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACCTTGTACCCAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGCTTGCTCTTCATGGCTaGCTCAGCCTGCTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAELALHG*LSLLLY
Trigger: ATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAG...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCCAGAGTTGTCTCCCTTaGAGTTTTCTTCATTGTTTC +
Preference number: 3 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCQSCLP*SFLHCF
Trigger: GAAACAATGAAGAAAACTCAAAGGGAGACAACTCTG...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp TGTTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTaGAATTTGATGATGCTGAGTGGTCTTGGTTTCTGT +
Preference number: 3 (lower is better)
Translates to: CWGLQDWLRWEY*NLMMLSGLGFC
Trigger: ACAGAAACCAAGACCACTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp TTTTGGGTGTGTTGGGGTCTCCAGGACTGGCTGAGGTaGGAGTACTGGAATTTGATGATGCTGAGTGGTCTT +
Preference number: 3 (lower is better)
Translates to: FWVCWGLQDWLR*EYWNLMMLSGL
Trigger: AAGACCACTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAACACACCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 72 bp GATGCAGAAGCCATGGAGGGGTGTTGCTTACTGACTTaGTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTG +
Preference number: 3 (lower is better)
Translates to: DAEAMEGCCLLT*SSWLAQPASLL
Trigger: CAATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACACCCCTCCATGGCTTCTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 72 bp AGCTCTCTCCTGAGTCTCAGTGATCAGAGCACTCTCTaGAGGCAAGTTCTCCTTTTTCTTGCAGTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: SSLLSLSDQSTL*RQVLLFLAVKV
Trigger: CACCTTCACTGCAAGAAAAAGGAGAACTTGCCTGCAGAGAGTGCTCTGATCACTGAGACTCAGGAGAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TGTTGCTTACTGACTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTGATCACAGCACACTGGGATTaGAGGCATGTGCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: CCLLTCSSWLAQPASLLITAHWD*RHVPAA
Trigger: AGCTGCTGGCACATGCCTCAAATCCCAGTGTGCTGT...GATCAATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGGAATTCTCTACAGGTTaGTCTACAGCCAATCCTTAC +
Preference number: 3 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAEEFSTG*STANPY
Trigger: GTAAGGATTGGCTGTAGACAAACCTGTAGAGAATTC...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TGTCCACACAATGGGATGGGCCATCCCATATTACTAATTAAGAGAATTCTCTACACAGCACACTGGGATTaGAGGCATGTGCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: CPHNGMGHPILLIKRILYTAHWD*RHVPAA
Trigger: AGCTGCTGGCACATGCCTCAAATCCCAGTGTGCTGT...GTAGAGAATTCTCTTAATTAGTAATATGGGATGGCCCATCCCATTGTGTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp TGTTACACTTTTATGGAACTCAAATTGGGCAGGAGCTaGTGCAGAAGCCATGGAGGGGTGTTGCTTACTGAC +
Preference number: 3 (lower is better)
Translates to: CYTFMELKLGRS*CRSHGGVLLTD
Trigger: GTCAGTAAGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATAAAAGTGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TTGGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCAACAGCACACTGGGATTaGAGGCATGTGCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LVCFKVFSFQDTIYTGSSTAHWD*RHVPAA
Trigger: AGCTGCTGGCACATGCCTCAAATCCCAGTGTGCTGT...TGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp GGATCTTCACTGGGACTTTTCTGTATATCCTGTTACTaGCCTGTGTTGTGGAAATCCTGCAGCTTTGGACCT +
Preference number: 3 (lower is better)
Translates to: GSSLGLFCISCY*PVLWKSCSFGP
Trigger: AGGTCCAAAGCTGCAGGATTTCCACAACACAGGTCAGTAACAGGATATACAGAAAAGTCCCAGTGAAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 72 bp AAGCAGGTAGAGAGAGTCCATAGGTTAGATTGGAGATaGCAGGCACTCTTGCCTATACTTTCCTCTCATTTT +
Preference number: 3 (lower is better)
Translates to: KQVERVHRLDWR*QALLPILSSHF
Trigger: AAAATGAGAGGAAAGTATAGGCAAGAGTGCCTGGCATCTCCAATCTAACCTATGGACTCTCTCTACCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp GACCTGTGTTGTGGAAATCCTGCAGCTTTGGACCTGTaGCCCTTTTACATGCTTCAGAAGATAATAAATGTT +
Preference number: 3 (lower is better)
Translates to: DLCCGNPAALDL*PFYMLQKIINV
Trigger: AACATTTATTATCTTCTGAAGCATGTAAAAGGGCCACAGGTCCAAAGCTGCAGGATTTCCACAACACAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp GCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGTaGTCTTGGTTTCTGTTATTAAGATTCTTAGGTTTG +
Preference number: 3 (lower is better)
Translates to: AEVGVLEFDDAE*SWFLLLRFLGL
Trigger: CAAACCTAAGAATCTTAATAACAGAAACCAAGACCACTCAGCATCATCAAATTCCAGTACTCCCACCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGAGAAGCAATTTCTCAGTaGAGTTTCCTTCCCCTCAAA +
Preference number: 3 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGEAISQ*SFLPLK
Trigger: TTTGAGGGGAAGGAAACTCAACTGAGAAATTGCTTC...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACCAGAGTTGTCTCCCTTaGAGTTTTCTTCATTGTTTC +
Preference number: 3 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDQSCLP*SFLHCF
Trigger: GAAACAATGAAGAAAACTCAAAGGGAGACAACTCTG...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TTGGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCAGAATTCTCTACAGGTTaGTCTACAGCCAATCCTTAC +
Preference number: 3 (lower is better)
Translates to: LVCFKVFSFQDTIYTGSSEFSTG*STANPY
Trigger: GTAAGGATTGGCTGTAGACAAACCTGTAGAGAATTC...TGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR GCA 72 bp ATCTCACCTCTCATAATCAAAAGACCTTTGTCAATTTaGTCTGGCTTAGAGTGGTCACCATTTCCACAATGT +
Preference number: 3 (lower is better)
Translates to: ISPLIIKRPLSI*SGLEWSPFPQC
Trigger: ACATTGTGGAAATGGTGACCACTCTAAGCCAGAGCAAATTGACAAAGGTCTTTTGATTATGAGAGGTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp ATCAAAAGACCTTTGTCAATTTGCTCTGGCTTAGAGTaGTCACCATTTCCACAATGTGTTCTTCTGTTTCAC +
Preference number: 3 (lower is better)
Translates to: IKRPLSICSGLE*SPFPQCVLLFH
Trigger: GTGAAACAGAAGAACACATTGTGGAAATGGTGACCACTCTAAGCCAGAGCAAATTGACAAAGGTCTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp ATGTGCCAGCAGCTTTGGCTATGCTTATGTCTAAACTaGGTCCAAGACAGATTAAATAACTATCCACTCATT +
Preference number: 3 (lower is better)
Translates to: MCQQLWLCLCLN*VQDRLNNYPLI
Trigger: AATGAGTGGATAGTTATTTAATCTGTCTTGGACCCAGTTTAGACATAAGCATAGCCAAAGCTGCTGGCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp TTAGCTTTCAGGACACTATCTATACTGGATCTTCACTaGGACTTTTCTGTATATCCTGTTACTGACCTGTGT +
Preference number: 3 (lower is better)
Translates to: LAFRTLSILDLH*DFSVYPVTDLC
Trigger: ACACAGGTCAGTAACAGGATATACAGAAAAGTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR-3UTR CAA 90 bp TGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGATTCTTTAAGGGATTTTaGTGCTTCCTCTTTAAGGAC +
Preference number: 3 (lower is better)
Translates to: CFKVFSFQDTIYTGSSLGFFKGF*CFLFKD
Trigger: GTCCTTAAAGAGGAAGCACAAAAATCCCTTAAAGAA...TCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp TTTCTTTACTTGCCGATGCTCATTGCAATGAGTTATTaGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACTA +
Preference number: 3 (lower is better)
Translates to: FLYLPMLIAMSY*SVSRSLAFRTL
Trigger: TAGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAATAACTCATTGCAATGAGCATCGGCAAGTAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp AACTTTGCTAAACTGCATGTAGTTTCAACAGTCTTGTaGGGTGGTAAGACAATACATACAATATGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: NFAKLHVVSTVL*GGKTIHTICGR
Trigger: CCTTCCACATATTGTATGTATTGTCTTACCACCTCACAAGACTGTTGAAACTACATGCAGTTTAGCAAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp CAAAGGAAAGATCTGCTTCAGTCTTTATTTGTAGAATaGCATCTTCCCAGCATTACAGCCATAGGAAATTGT +
Preference number: 3 (lower is better)
Translates to: QRKDLLQSLFVE*HLPSITAIGNC
Trigger: ACAATTTCCTATGGCTGTAATGCTGGGAAGATGTCATTCTACAAATAAAGACTGAAGCAGATCTTTCCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR TCA 72 bp TTTAAGGACTTCTACCTGTTTAGCAGTGTTTTCCTGTaGTTCTTTAAGGGATTTTTGTGCTTCCTCTTTAAG +
Preference number: 3 (lower is better)
Translates to: FKDFYLFSSVFL*FFKGFLCFLFK
Trigger: CTTAAAGAGGAAGCACAAAAATCCCTTAAAGAATCACAGGAAAACACTGCTAAACAGGTAGAAGTCCTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CCA 72 bp CATATTTTTATTGAGACCCTAATTTGTGGTAGGTTCTaGTCTAGATATTGGAAATTCAATAGTGAACCCACA +
Preference number: 3 (lower is better)
Translates to: HIFIETLICGRF*SRYWKFNSEPT
Trigger: TGTGGGTTCACTATTGAATTTCCAATATCTAGACCAGAACCTACCACAAATTAGGGTCTCAATAAAAATATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp GCCCAGAGGTCTGGGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTATACTAGGAGCCCACTaGCCCAGGACCCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AQRSGSQLQFLAESWGQSILGAH*PRTLGP
Trigger: TGGCCCTAGGGTCCTGGGCCAGTGGGCTCCTAGTAT...ACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACCCAGACCTCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCAAGGTTGAGAACACCTTaGGTCTCCCCTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: FWRPTLLWQGRCPEVWVSRLRTP*VSPLQT
Trigger: AGTCTGGAGAGGGGAGACTCAAGGTGTTCTCAACCT...TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp AGGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCAGGTTGAGAACACCTTaGGTCTCCCCTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: RSGAQLCLLAEVEGLKGPRLRTP*VSPLQT
Trigger: AGTCTGGAGAGGGGAGACTCAAGGTGTTCTCAACCT...GGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp AGGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCCATCACCGCCAGCAGTaGACACTCTGTACACCCAAT +
Preference number: 4 (lower is better)
Translates to: RSGAQLCLLAEVEGLKGPHHRQQ*TLCTPN
Trigger: ATTGGGTGTACAGAGTGTGCACTGCTGGCGGTGATG...GGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp TTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCAGGTGGAGTAGTGCAGTaGTTTGCACACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: FWRPTLLWQGRCPEVWVSGGVVQ*FAHSHI
Trigger: TATGTGGCTGTGTGCAAACCACTGCACTACTCCACC...TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp GGTCTCAGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTCCTCCCTGGAGGCACAAACAGGAGGATCTaGGTCTGTGCATCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: GLSSNSWLSPGVRVLPGGTNRRI*VCASCE
Trigger: TTCGCAAGATGCACAGACTCAGATCCTCCTGTTTGT...GCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCTGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TTTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCAAGTGGGACAGCACTTaGGGAACAATGCTATTTGAG +
Preference number: 4 (lower is better)
Translates to: FLEADSPLAGKVPRGLGLKWDST*GTMLFE
Trigger: CTCAAATAGCATTGTTCCTCAAGTGCTGTCCCACTT...GAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp TTCTGGAGGCCGACTCTCCTCTGGCAGGGAAGGTGCCCAGAGGTCTGGGTCTCACACCCATTGCAAAGATaGCCATTTCTGTGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: FWRPTLLWQGRCPEVWVSHPLQR*PFLCCK
Trigger: CTTACAGCACAGAAATGGCCATCTTTGCAATGGGTG...TGAGACCCAGACCTCTGGGCACCTTCCCTGCCAGAGGAGAGTCGGCCTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCTCTGTACACCCAATCTaGAGGGAGACAATTACCTGT +
Preference number: 4 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCSVHPI*RETITC
Trigger: ACAGGTAATTGTCTCCCTTCAGATTGGGTGTACAGA...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCGATTACCACACCCATTaGAAAGATGGCCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCDYHTH*KDGHFC
Trigger: ACAGAAATGGCCATCTTTGCAATGGGTGTGGTAATC...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp AGCTCCAATTCCTGGCTGAGTCCTGGGGTCAGAGTCCTCCCTGGAGGCCATCATGATTACCACACCCATTaGAAAGATGGCCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSNSWLSPGVRVLPGGHHDYHTH*KDGHFC
Trigger: ACAGAAATGGCCATCTTTGCAATGGGTGTGGTAATC...ATGATGGCCTCCAGGGAGGACTCTGACCCCAGGACTCAGCCAGGAATTGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp GACCCTGGGTACAAGGTGATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCGCACTTGAGGAACAATaGTATTTGAGAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: DPGYKVMLSPESWGQSPFALEEQ*YLRNRD
Trigger: ATCTCTGTTTCTCAAATAGCATTGTTCCTCAAGTGC...GAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCATCACCTTGTACCCAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp GCTCCCCAATACCACTCATCTCCCCATCCCTTCGTATCCACCCTCCACCCTTGCGCACTTGAGGAACAATaGTATTTGAGAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: APQYHSSPHPFVSTLHPCALEEQ*YLRNRD
Trigger: ATCTCTGTTTCTCAAATAGCATTGTTCCTCAAGTGC...GCAAGGGTGGAGGGTGGATACGAAGGGATGGGGAGATGAGTGGTATTGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGTCTCCAGACTGCATCTaGATCACAGTGGATATGATG +
Preference number: 4 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAESPDCI*ITVDMM
Trigger: CATCATATCCACTGTGATCCAGATGCAGTCTGGAGA...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TTGGGGTCTCCAGGACTGGCTGAGGTGGGAGTACTGGAATTTGATGATGCTGAGAGGAACAATGCTATTTaGGAAACAGAGATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LGSPGLAEVGVLEFDDAERNNAI*ETEICK
Trigger: TTTGCAGATCTCTGTTTCTCAAATAGCATTGTTCCT...CTCAGCATCATCAAATTCCAGTACTCCCACCTCAGCCAGTCCTGGAGACCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp TGTTGCTTACTGACTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTGATCGGTGGAGTAGTGCAGTaGTTTGCACACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: CCLLTCSSWLAQPASLLIGGVVQ*FAHSHI
Trigger: TATGTGGCTGTGTGCAAACCACTGCACTACTCCACC...GATCAATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp GGGGTGTTGCTTACTGACTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTTCTCCAGACTGCATCTaGATCACAGTGGATATGATG +
Preference number: 4 (lower is better)
Translates to: GVLLTDLLFMACSACFFISPDCI*ITVDMM
Trigger: CATCATATCCACTGTGATCCAGATGCAGTCTGGAGA...AATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CAA 72 bp AGCATTACAGCCATAGGAAATTGTAGCAGAGCAGCTTaGACTACTTGCAAGCAACCCTCTCTATCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SITAIGNCSRAA*TTCKQPSLSGL
Trigger: CAGGCCTGATAGAGAGGGTTGCTTGCAAGTAGTCAAAGCTGCTCTGCTACAATTTCCTATGGCTGTAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACGGTGGAGTAGTGCAGTaGTTTGCACACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDGGVVQ*FAHSHI
Trigger: TATGTGGCTGTGTGCAAACCACTGCACTACTCCACC...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGACAAACAGGAGGATCTaGGTCTGTGCATCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: FCLLVISGVSCFNCLWLETNRRI*VCASCE
Trigger: TTCGCAAGATGCACAGACTCAGATCCTCCTGTTTGT...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TGTTGCTTACTGACTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTGATCAAGTGGGACAGCACTTaGGGAACAATGCTATTTGAG +
Preference number: 4 (lower is better)
Translates to: CCLLTCSSWLAQPASLLIKWDST*GTMLFE
Trigger: CTCAAATAGCATTGTTCCTCAAGTGCTGTCCCACTT...GATCAATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TGTTGCTTACTGACTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTGATCTCTGTACACCCAATCTaGAGGGAGACAATTACCTGT +
Preference number: 4 (lower is better)
Translates to: CCLLTCSSWLAQPASLLISVHPI*RETITC
Trigger: ACAGGTAATTGTCTCCCTTCAGATTGGGTGTACAGA...GATCAATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp AGTGGTCACCATTTCCACAATGTGTTCTTCTGTTTCACAATTCTTCCTGAAATGAGGTTGAGAACACCTTaGGTCTCCCCTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: SGHHFHNVFFCFTILPEMRLRTP*VSPLQT
Trigger: AGTCTGGAGAGGGGAGACTCAAGGTGTTCTCAACCT...CATTTCAGGAAGAATTGTGAAACAGAAGAACACATTGTGGAAATGGTGACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TTGGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCAAGGTTGAGAACACCTTaGGTCTCCCCTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: LVCFKVFSFQDTIYTGSSRLRTP*VSPLQT
Trigger: AGTCTGGAGAGGGGAGACTCAAGGTGTTCTCAACCT...TGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp CAACCTAGGGCTTGTCCACACAATGGGATGGGCCATCCCATATTACTAATTAAGGATTACCACACCCATTaGAAAGATGGCCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: QPRACPHNGMGHPILLIKDYHTH*KDGHFC
Trigger: ACAGAAATGGCCATCTTTGCAATGGGTGTGGTAATC...CTTAATTAGTAATATGGGATGGCCCATCCCATTGTGTGGACAAGCCCTAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGAAGTGGGACAGCACTTaGGGAACAATGCTATTTGAG +
Preference number: 4 (lower is better)
Translates to: FCLLVISGVSCFNCLWLEKWDST*GTMLFE
Trigger: CTCAAATAGCATTGTTCCTCAAGTGCTGTCCCACTT...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACAAGTGGGACAGCACTTaGGGAACAATGCTATTTGAG +
Preference number: 4 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDKWDST*GTMLFE
Trigger: CTCAAATAGCATTGTTCCTCAAGTGCTGTCCCACTT...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp AGTGGTCACCATTTCCACAATGTGTTCTTCTGTTTCACAATTCTTCCTGAAATGGGTGGAGTAGTGCAGTaGTTTGCACACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: SGHHFHNVFFCFTILPEMGGVVQ*FAHSHI
Trigger: TATGTGGCTGTGTGCAAACCACTGCACTACTCCACC...CATTTCAGGAAGAATTGTGAAACAGAAGAACACATTGTGGAAATGGTGACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp TTTTGCCTTCTGGTAATCTCTGGTGTTAGTTGTTTTAACTGTCTCTGGCTGGAGCACCCATTGCAAAGATaGCCATTTCTGTGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: FCLLVISGVSCFNCLWLEHPLQR*PFLCCK
Trigger: CTTACAGCACAGAAATGGCCATCTTTGCAATGGGTG...CTCCAGCCAGAGACAGTTAAAACAACTAACACCAGAGATTACCAGAAGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp GTTTCAAGGTCTTTAGCTTTCAGGACACTATCTATACTGGATCTTCACTGGGACCACCCATTGCAAAGATaGCCATTTCTGTGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: VSRSLAFRTLSILDLHWDHPLQR*PFLCCK
Trigger: CTTACAGCACAGAAATGGCCATCTTTGCAATGGGTG...GTCCCAGTGAAGATCCAGTATAGATAGTGTCCTGAAAGCTAAAGACCTTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp AGTGGTCACCATTTCCACAATGTGTTCTTCTGTTTCACAATTCTTCCTGAAATGACAAACAGGAGGATCTaGGTCTGTGCATCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: SGHHFHNVFFCFTILPEMTNRRI*VCASCE
Trigger: TTCGCAAGATGCACAGACTCAGATCCTCCTGTTTGT...CATTTCAGGAAGAATTGTGAAACAGAAGAACACATTGTGGAAATGGTGACCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp TCTACAGGTTTGTCTACAGCCAATCCTTACAGAAGCAATTTCTCAGTTGAGTTTACAAACAGGAGGATCTaGGTCTGTGCATCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: STGLSTANPYRSNFSVEFTNRRI*VCASCE
Trigger: TTCGCAAGATGCACAGACTCAGATCCTCCTGTTTGT...AAACTCAACTGAGAAATTGCTTCTGTAAGGATTGGCTGTAGACAAACCTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp CAACCTAGGGCTTGTCCACACAATGGGATGGGCCATCCCATATTACTAATTAAGGCACTTGAGGAACAATaGTATTTGAGAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: QPRACPHNGMGHPILLIKALEEQ*YLRNRD
Trigger: ATCTCTGTTTCTCAAATAGCATTGTTCCTCAAGTGC...CTTAATTAGTAATATGGGATGGCCCATCCCATTGTGTGGACAAGCCCTAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp TGTCCACACAATGGGATGGGCCATCCCATATTACTAATTAAGAGAATTCTCTACTCTCCAGACTGCATCTaGATCACAGTGGATATGATG +
Preference number: 4 (lower is better)
Translates to: CPHNGMGHPILLIKRILYSPDCI*ITVDMM
Trigger: CATCATATCCACTGTGATCCAGATGCAGTCTGGAGA...GTAGAGAATTCTCTTAATTAGTAATATGGGATGGCCCATCCCATTGTGTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CAA 72 bp CATCTCACCTCTCATAATCAAAAGACCTTTGTCAATTaGCTCTGGCTTAGAGTGGTCACCATTTCCACAATG +
Preference number: 4 (lower is better)
Translates to: HLTSHNQKTFVN*LWLRVVTISTM
Trigger: CATTGTGGAAATGGTGACCACTCTAAGCCAGAGCAAATTGACAAAGGTCTTTTGATTATGAGAGGTGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CAA 72 bp AGAGTCCATAGGTTAGATTGGAGATGCCAGGCACTCTaGCCTATACTTTCCTCTCATTTTTGTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: RVHRLDWRCQAL*PILSSHFCVTL
Trigger: CAAAGTTACACAAAAATGAGAGGAAAGTATAGGCAAGAGTGCCTGGCATCTCCAATCTAACCTATGGACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR TCA 90 bp AGTGGTCACCATTTCCACAATGTGTTCTTCTGTTTCACAATTCTTCCTGAAATGTCTGTACACCCAATCTaGAGGGAGACAATTACCTGT +
Preference number: 4 (lower is better)
Translates to: SGHHFHNVFFCFTILPEMSVHPI*RETITC
Trigger: ACAGGTAATTGTCTCCCTTCAGATTGGGTGTACAGA...CATTTCAGGAAGAATTGTGAAACAGAAGAACACATTGTGGAAATGGTGACCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp TCTACAGGTTTGTCTACAGCCAATCCTTACAGAAGCAATTTCTCAGTTGAGTTTCACCCATTGCAAAGATaGCCATTTCTGTGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: STGLSTANPYRSNFSVEFHPLQR*PFLCCK
Trigger: CTTACAGCACAGAAATGGCCATCTTTGCAATGGGTG...AAACTCAACTGAGAAATTGCTTCTGTAAGGATTGGCTGTAGACAAACCTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CCA 90 bp AGTGGTCACCATTTCCACAATGTGTTCTTCTGTTTCACAATTCTTCCTGAAATGTCTCCAGACTGCATCTaGATCACAGTGGATATGATG +
Preference number: 4 (lower is better)
Translates to: SGHHFHNVFFCFTILPEMSPDCI*ITVDMM
Trigger: CATCATATCCACTGTGATCCAGATGCAGTCTGGAGA...CATTTCAGGAAGAATTGTGAAACAGAAGAACACATTGTGGAAATGGTGACCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp AGAATTCTCTACAGGTTTGTCTACAGCCAATCCTTACAGAAGCAATTTCTCAGTGATTACCACACCCATTaGAAAGATGGCCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: RILYRFVYSQSLQKQFLSDYHTH*KDGHFC
Trigger: ACAGAAATGGCCATCTTTGCAATGGGTGTGGTAATC...ACTGAGAAATTGCTTCTGTAAGGATTGGCTGTAGACAAACCTGTAGAGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CAA 72 bp GTGGTAAGACAATACATACAATATGTGGAAGGTAAATaGAAGTGTGGTGGTGGAGACTCCTATTTATGCTGC +
Preference number: 4 (lower is better)
Translates to: VVRQYIQYVEGK*KCGGGDSYLCC
Trigger: GCAGCATAAATAGGAGTCTCCACCACCACACTTCAATTTACCTTCCACATATTGTATGTATTGTCTTACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR GCA 90 bp TGTCCACACAATGGGATGGGCCATCCCATATTACTAATTAAGAGAATTCTCTACGCACTTGAGGAACAATaGTATTTGAGAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: CPHNGMGHPILLIKRILYALEEQ*YLRNRD
Trigger: ATCTCTGTTTCTCAAATAGCATTGTTCCTCAAGTGC...GTAGAGAATTCTCTTAATTAGTAATATGGGATGGCCCATCCCATTGTGTGGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CAA 72 bp ATTTCTTTACTTGCCGATGCTCATTGCAATGAGTTATaGGTCTGTTTCAAGGTCTTTAGCTTTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: ISLLADAHCNEL*VCFKVFSFQDT
Trigger: AGTGTCCTGAAAGCTAAAGACCTTGAAACAGACCAATAACTCATTGCAATGAGCATCGGCAAGTAAAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
3UTR CAA 72 bp ATTGTTTCTACTTCCATTTTTAGATCTTGGATGGTTTaGTTCAATTCCATCACCTGTTTGTGTTTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: IVSTSIFRSWMV*FNSITCLCLPV
Trigger: TACAGGCAAACACAAACAGGTGATGGAATTGAACAAAACCATCCAAGATCTAAAAATGGAAGTAGAAACAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CAA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCCAGGTTGAGAACACCTaGAGTCTCCCCTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLQVENT*SLPSPD
Trigger: GTCTGGAGAGGGGAGACTCAAGGTGTTCTCAACCTG...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CAA 90 bp AGGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGTTGAAGGCCTGAAGGGACCCGGATTACCACACCCATaGCAAAGATGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: RSGAQLCLLAEVEGLKGPGLPHP*QRWPFL
Trigger: CAGAAATGGCCATCTTTGCAATGGGTGTGGTAATCC...GGGTCCCTTCAGGCCTTCAACTTCAGCCAGGAGGCAGAGCTGAGCTCCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CAA 90 bp ATGCTCTCACCTGAGTCCTGGGGTCAGAGCCCTTTCTGGAGGCCGACTCTCCTCTTCCTGAAGGCACTTTaGACATCCTTGTTCCGAAGA +
Preference number: 5 (lower is better)
Translates to: MLSPESWGQSPFWRPTLLFLKAL*TSLFRR
Trigger: TCTTCGGAACAAGGATGTCAAAAGTGCCTTCAGGAA...GAGGAGAGTCGGCCTCCAGAAAGGGCTCTGACCCCAGGACTCAGGTGAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS CCA 90 bp GATGGAAAGCAACAGCAATATCTACCAAACATACTAGGAGCCCACTaGCCCAGGACCCTAGGGCCAACTGCAGGCATAGTTGTTGGGTCA +
Preference number: 5 (lower is better)
Translates to: DGKQQQYLPNILGAH*PRTLGPTAGIVVGS
Trigger: TGACCCAACAACTATGCCTGCAGTTGGCCCTAGGGTCCTGGGCCAGTGGGCTCCTAGTATGTTTGGTAGATATTGCTGTTGCTTTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000098137.3
ENSMUST00000210474.2
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CAA 90 bp TATGGAACTCAAATTGGGCAGGAGCTGATGCAGAAGCCATGGAGGGGTGTTGCTGGATTACCACACCCATaGCAAAGATGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: YGTQIGQELMQKPWRGVAGLPHP*QRWPFL
Trigger: CAGAAATGGCCATCTTTGCAATGGGTGTGGTAATCC...AGCAACACCCCTCCATGGCTTCTGCATCAGCTCCTGCCCAATTTGAGTTCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CAA 90 bp CAACCTAGGGCTTGTCCACACAATGGGATGGGCCATCCCATATTACTAATTAAGGGATTACCACACCCATaGCAAAGATGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: QPRACPHNGMGHPILLIKGLPHP*QRWPFL
Trigger: CAGAAATGGCCATCTTTGCAATGGGTGTGGTAATCC...CTTAATTAGTAATATGGGATGGCCCATCCCATTGTGTGGACAAGCCCTAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CAA 90 bp GGGGTGTTGCTTACTGACTTGCTCTTCATGGCTTGCTCAGCCTGCTTCTTTATTTTCCTGAAGGCACTTTaGACATCCTTGTTCCGAAGA +
Preference number: 5 (lower is better)
Translates to: GVLLTDLLFMACSACFFIFLKAL*TSLFRR
Trigger: TCTTCGGAACAAGGATGTCAAAAGTGCCTTCAGGAA...AATAAAGAAGCAGGCTGAGCAAGCCATGAAGAGCAAGTCAGTAAGCAACACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CAA 90 bp TCTACAGGTTTGTCTACAGCCAATCCTTACAGAAGCAATTTCTCAGTTGAGTTTGGATTACCACACCCATaGCAAAGATGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: STGLSTANPYRSNFSVEFGLPHP*QRWPFL
Trigger: CAGAAATGGCCATCTTTGCAATGGGTGTGGTAATCC...AAACTCAACTGAGAAATTGCTTCTGTAAGGATTGGCTGTAGACAAACCTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS-3UTR CAA 90 bp AGAATTCTCTACAGGTTTGTCTACAGCCAATCCTTACAGAAGCAATTTCTCAGTTTCCTGAAGGCACTTTaGACATCCTTGTTCCGAAGA +
Preference number: 5 (lower is better)
Translates to: RILYRFVYSQSLQKQFLSFLKAL*TSLFRR
Trigger: TCTTCGGAACAAGGATGTCAAAAGTGCCTTCAGGAA...ACTGAGAAATTGCTTCTGTAAGGATTGGCTGTAGACAAACCTGTAGAGAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS TCA 72 bp ATCACCGCCAGCAGTGCACACTCTGTACACCCAATCTaGAGGGAGACAATTACCTGTGTCACACAGCCCCAA +
Preference number: 6 (lower is better)
Translates to: ITASSAHSVHPI*RETITCVTQPQ
Trigger: TTGGGGCTGTGTGACACAGGTAATTGTCTCCCTTCAGATTGGGTGTACAGAGTGTGCACTGCTGGCGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000098137.3
ENSMUST00000210474.2
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS CCA 72 bp CAACAGCAATATCTACCAAACATACTAGGAGCCCACTaGCCCAGGACCCTAGGGCCAACTGCAGGCATAGTT +
Preference number: 6 (lower is better)
Translates to: QQQYLPNILGAH*PRTLGPTAGIV
Trigger: AACTATGCCTGCAGTTGGCCCTAGGGTCCTGGGCCAGTGGGCTCCTAGTATGTTTGGTAGATATTGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000098137.3
ENSMUST00000210474.2
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS GCA 72 bp GATGAAGAAAAGGACAAACAGGAGGATCTGAGTCTGTaGATCTTGCGAAAGGCCCAGCAACACAAATTCATC +
Preference number: 6 (lower is better)
Translates to: DEEKDKQEDLSL*ILRKAQQHKFI
Trigger: GATGAATTTGTGTTGCTGGGCCTTTCGCAAGATGCACAGACTCAGATCCTCCTGTTTGTCCTTTTCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000098137.3
ENSMUST00000210474.2
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS CAA 72 bp GAAAAGGACAAACAGGAGGATCTGAGTCTGTGCATCTaGCGAAAGGCCCAGCAACACAAATTCATCTACAAA +
Preference number: 6 (lower is better)
Translates to: EKDKQEDLSLCI*RKAQQHKFIYK
Trigger: TTTGTAGATGAATTTGTGTTGCTGGGCCTTTCGCAAGATGCACAGACTCAGATCCTCCTGTTTGTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000098137.3
ENSMUST00000210474.2
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3
CDS TCA 72 bp ATAGTTTTCCTTTTTACCAGGAAGTGGGACAGCACTTaGGGAACAATGCTATTTGAGAAACAGAGATCTGCA +
Preference number: 6 (lower is better)
Translates to: IVFLFTRKWDST*GTMLFEKQRSA
Trigger: TGCAGATCTCTGTTTCTCAAATAGCATTGTTCCTCAAGTGCTGTCCCACTTCCTGGTAAAAAGGAAAACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000098137.3
ENSMUST00000210474.2
ENSMUST00000213367.3
ENSMUST00000214819.3
ENSMUST00000215284.3
ENSMUST00000216871.3