Pregenerated sensors for OLFR715 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060503Ensembl transcript IDs: ENSMUST00000076958.6, ENSMUST00000214919.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCTTGTGAGACTATGCCGGGGCCAGGCAAACACATAAGTGGATaGTCACAGTCAGCTATTGGATGGATCCCAGGGCCCCCAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSCETMPGPGKHISG*SQSAIGWIPGPPME Trigger: CTCCATTGGGGGCCCTGGGATCCATCCAATAGCTGACTGTGAGCATCCACTTATGTGTTTGCCTGGCCCCGGCATAGTCTCACAAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 90 bp | GGGCCAGGCAAACACATAAGTGGATGCTCACAGTCAGCTATTGGATaGATCCCAGGGCCCCCAATGGAGAAGCTAGAGAAAATACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GPGKHISGCSQSAIG*IPGPPMEKLEKIPK Trigger: CTTGGGTATTTTCTCTAGCTTCTCCATTGGGGGCCCTGGGATCCATCCAATAGCTGACTGTGAGCATCCACTTATGTGTTTGCCTGGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 90 bp | TTCCATAGCTCTTGCCTGGTGGTCTCTGCATACAGCTACCATTCCTaGTTCCTGTTCCTTCATTTTAGTCCTTCAGGCATGGAGGTGATT | + |
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Preference number: 1 (lower is better) Translates to: FHSSCLVVSAYSYHS*FLFLHFSPSGMEVI Trigger: AATCACCTCCATGCCTGAAGGACTAAAATGAAGGAACAGGAACCAGGAATGGTAGCTGTATGCAGAGACCACCAGGCAAGAGCTATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR TCA 90 bp | CAAGGAGCTAAAGGGATCTGCAACCCTGTAGGTGGAACAACATTATaGACTAACCAGTACCCCGGAGCTCTTTACTCTAGCTCCATATGT | + |
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Preference number: 1 (lower is better) Translates to: QGAKGICNPVGGTTL*TNQYPGALYSSSIC Trigger: ACATATGGAGCTAGAGTAAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTACAGGGTTGCAGATCCCTTTAGCTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR TCA 90 bp | AGCCTCCAAAATCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAAGACCCTGATATAGCTGTCTCTTGTGAGACTATGCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: SLQNLTPLHTLARFC*KDPDIAVSCETMPG Trigger: CCCCGGCATAGTCTCACAAGAGACAGCTATATCAGGGTCTTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGATTTTGGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR TCA 90 bp | GAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: EQNTHGRSYRDKVWS*DKRMDHLETAISRD Trigger: ATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR TCA 90 bp | GGCCTTATCCTGATAAGTATGATCTTTGTGCGTCTAAAAAGATTGTaGATTGTCCAGAGAGCCTCCTTTATTCCTCCTCACTGTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: GLILISMIFVRLKRL*IVQRASFIPPHCSG Trigger: ACCAGAACAGTGAGGAGGAATAAAGGAGGCTCTCTGGACAATTCACAATCTTTTTAGACGCACAAAGATCATACTTATCAGGATAAGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR TCA 90 bp | ACTCTAGCTCCATATGTATCAAAAGATGGCCTAGAAGGCCATCACTaGAAAGAGAGTCCCATTGGACTTGCAAACTTTATATGCACCAGT | + |
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Preference number: 1 (lower is better) Translates to: TLAPYVSKDGLEGHH*KESPIGLANFICTS Trigger: ACTGGTGCATATAAAGTTTGCAAGTCCAATGGGACTCTCTTTTCAGTGATGGCCTTCTAGGCCATCTTTTGATACATATGGAGCTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR TCA 90 bp | ATTAATCACTGGATAATGAACAAATGCATGATTAGAGTGAAAGGGTaGACTTCTTCTCTTGGCTCTTTCAGATGCATCCTCTACCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: INHWIMNKCMIRVKG*TSSLGSFRCILYLL Trigger: GAGCAGGTAGAGGATGCATCTGAAAGAGCCAAGAGAAGAAGTTCACCCTTTCACTCTAATCATGCATTTGTTCATTATCCAGTGATTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 90 bp | GGCATGGAGGTGATTACTACCCTGAGATGTGTAATTATTTCTTGTTaGTTTCAAAACTCTGTATTCACATTTAGAAGGGGGCCTTATCCT | + |
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Preference number: 1 (lower is better) Translates to: GMEVITTLRCVIISC*FQNSVFTFRRGPYP Trigger: AGGATAAGGCCCCCTTCTAAATGTGAATACAGAGTTTTGAAACCAACAAGAAATAATTACACATCTCAGGGTAGTAATCACCTCCATGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCCCAATGGAGAAGCTAGAGAAAATACCCAAGGAGCTAAAGGGATCTGCAACTCACCAGTTTCCACCTaGAGTCGAATATCAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: APNGEARENTQGAKGICNSPVST*SRISKE Trigger: CTCCTTTGATATTCGACTCCAGGTGGAAACTGGTGA...GTTGCAGATCCCTTTAGCTCCTTGGGTATTTTCTCTAGCTTCTCCATTGGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCCAATGGAGAAGCTAGAGAAAATACCCAAGGAGCTAAAGGGATCTGCAACCTCCAACTCATTCCCTaGGTAAATAACTCTGGACAA | + |
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Preference number: 2 (lower is better) Translates to: APNGEARENTQGAKGICNLQLIP*VNNSGQ Trigger: TTGTCCAGAGTTATTTACTCAGGGAATGAGTTGGAG...GTTGCAGATCCCTTTAGCTCCTTGGGTATTTTCTCTAGCTTCTCCATTGGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCTCCTTTATTCCTCCTCACTGTTCTGGTCCTCTTCACTACCCACCTCAGCAGAGGGTTAAATATTaGTACGTAGCAATCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: RASFIPPHCSGPLHYPPQQRVKY*YVAIKQ Trigger: CTGTTTGATTGCTACGTAGCAATATTTAACCCTCTG...CTGAGGTGGGTAGTGAAGAGGACCAGAACAGTGAGGAGGAATAAAGGAGGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CAA 90 bp | GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTaGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATC | + |
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Preference number: 2 (lower is better) Translates to: ELGTKHPWKELQRQS*ELRQKDGPSRDCHI Trigger: GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCACACAATCACAGTGAGAGAGATCAGTACCCCACCCTTGTCAATAAACAGGATTAGAGTGAAAGGGTaGACTTCTTCTCTTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LHTITVREISTPPLSINRIRVKG*TSSLGS Trigger: AGAGCCAAGAGAAGAAGTTCACCCTTTCACTCTAAT...CCTGTTTATTGACAAGGGTGGGGTACTGATCTCTCTCACTGTGATTGTGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CAA 90 bp | AGAAGAAGGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: RRRKTKVWTLCPFLE*GTKHPWKELQRQSL Trigger: CAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCCTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CAA 90 bp | TCCACCTGGAGTCGAATATCAAAGGAGCAGAAAGTAGGTGAAGAATaGCCTTTAATTATTTTCTCATGGCTTGCTCACACACACACACGA | + |
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Preference number: 2 (lower is better) Translates to: STWSRISKEQKVGEE*PLIIFSWLAHTHTR Trigger: TCGTGTGTGTGTGTGAGCAAGCCATGAGAAAATAATTAAAGGCAATTCTTCACCTACTTTCTGCTCCTTTGATATTCGACTCCAGGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CAA 90 bp | AAACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGGACACTTaGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: KHMKLKKKEDQSVDT*PLLRIGNKTPMEGV Trigger: AACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCCTTCTTCTTGAGTTTCATGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGATGGCCTAGAAGGCCATCACTGAAAAGAGAGTCCCATTGGACTTGCAAAGGAGCAGAAAGTAGGTaGAGAATTGCCTTTAATTAT | + |
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Preference number: 2 (lower is better) Translates to: KRWPRRPSLKRESHWTCKGAESR*RIAFNY Trigger: ATAATTAAAGGCAATTCTTCACCTACTTTCTGCTCC...TTTGCAAGTCCAATGGGACTCTCTTTTCAGTGATGGCCTTCTAGGCCATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAATTTGCAAAACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGGACGAGTCCCATTGGACTTaGAAACTTTATATGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: LQFAKHMKLKKKEDQSVDESHWT*KLYMHQ Trigger: CTGGTGCATATAAAGTTTGCAAGTCCAATGGGACTC...GTCCACACTTTGGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR GCA 72 bp | GAGACTATGCCGGGGCCAGGCAAACACATAAGTGGATaGTCACAGTCAGCTATTGGATGGATCCCAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: ETMPGPGKHISG*SQSAIGWIPGP Trigger: GGGCCCTGGGATCCATCCAATAGCTGACTGTGAGCATCCACTTATGTGTTTGCCTGGCCCCGGCATAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 72 bp | TGTCCAGAGAGCCTCCTTTATTCCTCCTCACTGTTCTaGTCCTCTTCACTACCCACCTCAGACACATGCGTG | + |
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Preference number: 3 (lower is better) Translates to: CPESLLYSSSLF*SSSLPTSDTCV Trigger: CACGCATGTGTCTGAGGTGGGTAGTGAAGAGGACCAGAACAGTGAGGAGGAATAAAGGAGGCTCTCTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 72 bp | CACACACACACGATTTATTCCATAGCTCTTGCCTGGTaGTCTCTGCATACAGCTACCATTCCTGGTTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: HTHTIYSIALAW*SLHTATIPGSC Trigger: ACAGGAACCAGGAATGGTAGCTGTATGCAGAGACCACCAGGCAAGAGCTATGGAATAAATCGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 72 bp | AAACACATAAGTGGATGCTCACAGTCAGCTATTGGATaGATCCCAGGGCCCCCAATGGAGAAGCTAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: KHISGCSQSAIG*IPGPPMEKLEK Trigger: TTTCTCTAGCTTCTCCATTGGGGGCCCTGGGATCCATCCAATAGCTGACTGTGAGCATCCACTTATGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCCCCCAATGGAGAAGCTAGAGAAAATACCCAAGGAGCTAAAGGGATCTGCATTATTTTCTCATGGCTaGCTCACACACACACACGAT | + |
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Preference number: 3 (lower is better) Translates to: GPPMEKLEKIPKELKGSALFSHG*LTHTHD Trigger: ATCGTGTGTGTGTGTGAGCAAGCCATGAGAAAATAA...TGCAGATCCCTTTAGCTCCTTGGGTATTTTCTCTAGCTTCTCCATTGGGGGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR GCA 72 bp | AACTCAAGAAGAAGGAAGACCAAAGTGTGGACACTTTaGCCCTTCTTAGAATTGGGAACAAAACACCCATGG | + |
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Preference number: 3 (lower is better) Translates to: NSRRRKTKVWTL*PFLELGTKHPW Trigger: CCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCCTTCTTCTTGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGAACAGCCTACCATAGCTaGCATTCATACAGAAGACTA | + |
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Preference number: 3 (lower is better) Translates to: LCPFLELGTKHPWKELQRTAYHS*HSYRRL Trigger: TAGTCTTCTGTATGAATGCAAGCTATGGTAGGCTGT...TCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 72 bp | TGTGTAGATAGGATCCTTAATTCACCAGTTTCCACCTaGAGTCGAATATCAAAGGAGCAGAAAGTAGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: CVDRILNSPVST*SRISKEQKVGE Trigger: TTCACCTACTTTCTGCTCCTTTGATATTCGACTCCAGGTGGAAACTGGTGAATTAAGGATCCTATCTACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR TCA 72 bp | CCATATGTATCAAAAGATGGCCTAGAAGGCCATCACTaGAAAGAGAGTCCCATTGGACTTGCAAACTTTATA | + |
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Preference number: 3 (lower is better) Translates to: PYVSKDGLEGHH*KESPIGLANFI Trigger: TATAAAGTTTGCAAGTCCAATGGGACTCTCTTTTCAGTGATGGCCTTCTAGGCCATCTTTTGATACATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR TCA 72 bp | AATCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAAGACCCTGATATAGCTGTCTCTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: NLTPLHTLARFC*KDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCAGGGTCTTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR-3UTR CAA 90 bp | TTACAATTTGCAAAACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGGACTCCACCAAGAGGACATaGCAATTCTCAATATGTAGT | + |
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Preference number: 3 (lower is better) Translates to: LQFAKHMKLKKKEDQSVDSTKRT*QFSICS Trigger: ACTACATATTGAGAATTGCAATGTCCTCTTGGTGGA...GTCCACACTTTGGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 72 bp | AGCCATGGATTAAAGCTGTATATCAGAAATAACAGATaGCTTACAAACCCATGGAAAATGAACAACTCACTA | + |
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Preference number: 3 (lower is better) Translates to: SHGLKLYIRNNR*LTNPWKMNNSL Trigger: TAGTGAGTTGTTCATTTTCCATGGGTTTGTAAGCCATCTGTTATTTCTGATATACAGCTTTAATCCATGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CCA 72 bp | CTGTATATCAGAAATAACAGATGGCTTACAAACCCATaGAAAATGAACAACTCACTACTGAAAGAAAAATGG | + |
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Preference number: 3 (lower is better) Translates to: LYIRNNRWLTNP*KMNNSLLKEKW Trigger: CCATTTTTCTTTCAGTAGTGAGTTGTTCATTTTCCATGGGTTTGTAAGCCATCTGTTATTTCTGATATACAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | GCCCCCAATGGAGAAGCTAGAGAAAATACCCAAGGAGCTAAAGGGATCTGCAACGTGTACACCCAAAGATaGGAAAGAGCAGAAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: APNGEARENTQGAKGICNVYTQR*ERAEAG Trigger: CCCAGCTTCTGCTCTTTCTCATCTTTGGGTGTACAC...GTTGCAGATCCCTTTAGCTCCTTGGGTATTTTCTCTAGCTTCTCCATTGGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | AGAGCCTCCTTTATTCCTCCTCACTGTTCTGGTCCTCTTCACTACCCACCTCAGTGCCCAGAAATAAGATaGATAGCAGCTTCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: RASFIPPHCSGPLHYPPQCPEIR*IAASGC Trigger: ACACCCAGAAGCTGCTATTCATCTTATTTCTGGGCA...CTGAGGTGGGTAGTGAAGAGGACCAGAACAGTGAGGAGGAATAAAGGAGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGAGAGATCAGTACCCCACCCTTGTCAATAAACAGGTCATCCAGGCCAAAGCCATCTCTGAAGTTTaGGTGTCTGTAGAAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SERDQYPTLVNKQVIQAKAISEV*VSVEAR Trigger: CCTGGCTTCTACAGACACTCAAACTTCAGAGATGGC...TTTGGCCTGGATGACCTGTTTATTGACAAGGGTGGGGTACTGATCTCTCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGAGAGATCAGTACCCCACCCTTGTCAATAAACAGGTCATCCAGGCCAAAGAACCTCCCAGCAGCTaGTTTCATCTTGACAACAGT | + |
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Preference number: 4 (lower is better) Translates to: SERDQYPTLVNKQVIQAKEPPSS*FHLDNS Trigger: ACTGTTGTCAAGATGAAATCAGCTGCTGGGAGGTTC...TTTGGCCTGGATGACCTGTTTATTGACAAGGGTGGGGTACTGATCTCTCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CAA 72 bp | AAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAAGGAGTTACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KTKVWTLCPFLE*GTKHPWKELQR Trigger: TCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | AAGCCCAATGATAAACAGCCTACCATAGCTTGCATTCATACAGAAGACTATCTAGTGTACACCCAAAGATaGGAAAGAGCAGAAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KPNDKQPTIACIHTEDYLVYTQR*ERAEAG Trigger: CCCAGCTTCTGCTCTTTCTCATCTTTGGGTGTACAC...TAGATAGTCTTCTGTATGAATGCAAGCTATGGTAGGCTGTTTATCATTGGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | CTTCACACAATCACAGTGAGAGAGATCAGTACCCCACCCTTGTCAATAAACAGGGAAAATAGCCATCTCTaGAGTTTGAGTGTCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LHTITVREISTPPLSINRENSHL*SLSVCR Trigger: TCTACAGACACTCAAACTTCAGAGATGGCTATTTTC...CCTGTTTATTGACAAGGGTGGGGTACTGATCTCTCTCACTGTGATTGTGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| 3UTR CAA 72 bp | AAACTCAAGAAGAAGGAAGACCAAAGTGTGGACACTTaGCCCCTTCTTAGAATTGGGAACAAAACACCCATG | + |
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Preference number: 4 (lower is better) Translates to: KLKKKEDQSVDT*PLLRIGNKTPM Trigger: CATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCCTTCTTCTTGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | CCTACCATAGCTTGCATTCATACAGAAGACTATCTAGCATATGTTATATGTAGGGCCTCACAAAAGAAGTaGGCAATACTGTTGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PTIACIHTEDYLAYVICRASQKK*AILLLP Trigger: AGGCAGCAACAGTATTGCTCACTTCTTTTGTGAGGC...CCTACATATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGCTATGGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | ACCATAGCTTGCATTCATACAGAAGACTATCTAGCATATGTTATATGTAGGAAGGCCATCTCTGAAGTTTaGGTGTCTGTAGAAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TIACIHTEDYLAYVICRKAISEV*VSVEAR Trigger: CCTGGCTTCTACAGACACTCAAACTTCAGAGATGGC...CTTCCTACATATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGCTATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | CCTACCATAGCTTGCATTCATACAGAAGACTATCTAGCATATGTTATATGTAGGGAACCTCCCAGCAGCTaGTTTCATCTTGACAACAGT | + |
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Preference number: 4 (lower is better) Translates to: PTIACIHTEDYLAYVICREPPSS*FHLDNS Trigger: ACTGTTGTCAAGATGAAATCAGCTGCTGGGAGGTTC...CCTACATATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGCTATGGTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | ACAGCCTACCATAGCTTGCATTCATACAGAAGACTATCTAGCATATGTTATATGTGCCCAGAAATAAGATaGATAGCAGCTTCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TAYHSLHSYRRLSSICYMCPEIR*IAASGC Trigger: ACACCCAGAAGCTGCTATTCATCTTATTTCTGGGCA...CATATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGCTATGGTAGGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | CAGCCTACCATAGCTTGCATTCATACAGAAGACTATCTAGCATATGTTATATGTGGTTTCCAAGTACAGTaGCCATATAGATGCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QPTIACIHTEDYLAYVICGFQVQ*PYRCPE Trigger: TTCTGGGCATCTATATGGTCACTGTACTTGGAAACC...ACATATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGCTATGGTAGGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | CCTACCATAGCTTGCATTCATACAGAAGACTATCTAGCATATGTTATATGTAGGTTGAAAGGAGATGGATaGGAGCCTGTGGAACAATGT | + |
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Preference number: 4 (lower is better) Translates to: PTIACIHTEDYLAYVICRLKGDG*EPVEQC Trigger: ACATTGTTCCACAGGCTCTCATCCATCTCCTTTCAA...CCTACATATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGCTATGGTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | ACCATAGCTTGCATTCATACAGAAGACTATCTAGCATATGTTATATGTAGGAAGGCCTCACAAAAGAAGTaGGCAATACTGTTGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TIACIHTEDYLAYVICRKASQKK*AILLLP Trigger: AGGCAGCAACAGTATTGCTCACTTCTTTTGTGAGGC...CTTCCTACATATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGCTATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | GAGACTAAACAGAAACAGTTCCACAAGGGAGTAGTAAAAGAAACAATACAATTGGGTTTCCAAGTACAGTaGCCATATAGATGCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ETKQKQFHKGVVKETIQLGFQVQ*PYRCPE Trigger: TTCTGGGCATCTATATGGTCACTGTACTTGGAAACC...CAATTGTATTGTTTCTTTTACTACTCCCTTGTGGAACTGTTTCTGTTTAGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | AAGCCCAATGATAAACAGCCTACCATAGCTTGCATTCATACAGAAGACTATCTAAATAGTCTTTTTCCTTaGAAGGAGATGGATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KPNDKQPTIACIHTEDYLNSLFP*KEMDES Trigger: GCTCTCATCCATCTCCTTTCAAGGAAAAAGACTATT...TAGATAGTCTTCTGTATGAATGCAAGCTATGGTAGGCTGTTTATCATTGGGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | GCTTGCATTCATACAGAAGACTATCTAGCATATGTTATATGTAGGAAGTCAGGAAATAGTCTTTTTCCTTaGAAGGAGATGGATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ACIHTEDYLAYVICRKSGNSLFP*KEMDES Trigger: GCTCTCATCCATCTCCTTTCAAGGAAAAAGACTATT...TCCTGACTTCCTACATATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| 3UTR CAA 72 bp | AGTCGAATATCAAAGGAGCAGAAAGTAGGTGAAGAATaGCCTTTAATTATTTTCTCATGGCTTGCTCACACA | + |
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Preference number: 4 (lower is better) Translates to: SRISKEQKVGEE*PLIIFSWLAHT Trigger: TGTGTGAGCAAGCCATGAGAAAATAATTAAAGGCAATTCTTCACCTACTTTCTGCTCCTTTGATATTCGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS-3UTR TCA 90 bp | AAACAGCCTACCATAGCTTGCATTCATACAGAAGACTATCTAGCATATGTTATAGAAAATAGCCATCTCTaGAGTTTGAGTGTCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KQPTIACIHTEDYLAYVIENSHL*SLSVCR Trigger: TCTACAGACACTCAAACTTCAGAGATGGCTATTTTC...TATAACATATGCTAGATAGTCTTCTGTATGAATGCAAGCTATGGTAGGCTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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| 3UTR CAA 72 bp | GTGTTGTGTACTTATTGTCATACTATAATAAAGCCTTaGCTGGGATCTGATGTTCTCCATATTACAAACATG | + |
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Preference number: 4 (lower is better) Translates to: VLCTYCHTIIKP*LGSDVLHITNM Trigger: CATGTTTGTAATATGGAGAACATCAGATCCCAGCAAAGGCTTTATTATAGTATGACAATAAGTACACAACAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214919.2 |
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| CDS CCA 90 bp | AAAAGGGCACATTGTGTACACCCAAAGATGAGAAAGAGCAGAAGCTaGGCTGCACAGCGTCTAAATGAAATAGTCTTTTTCCTTGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: KRAHCVHPKMRKSRS*AAQRLNEIVFFLER Trigger: CCTTTCAAGGAAAAAGACTATTTCATTTAGACGCTGTGCAGCCCAGCTTCTGCTCTTTCTCATCTTTGGGTGTACACAATGTGCCCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076958.6 ENSMUST00000214919.2 |
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