RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR714 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049674

Ensembl transcript IDs: ENSMUST00000214429.2

Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAATCTCAGGACGATTTTCCTGTGAAGAACTCAGTGGGAAGGAAGTaGCCATTGAGGTTTTGCAGGCATACTCATGAGGGCTATGGAGCT +
Preference number: 1 (lower is better)
Translates to: ESQDDFPVKNSVGRK*PLRFCRHTHEGYGA
Trigger: AGCTCCATAGCCCTCATGAGTATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTTCACAGGAAAATCGTCCTGAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR GCA 90 bp TTTCCTGTGAAGAACTCAGTGGGAAGGAAGTGGCCATTGAGGTTTTaGAGGCATACTCATGAGGGCTATGGAGCTAATGTTCTGTGCTAC +
Preference number: 1 (lower is better)
Translates to: FPVKNSVGRKWPLRF*RHTHEGYGANVLCY
Trigger: GTAGCACAGAACATTAGCTCCATAGCCCTCATGAGTATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTTCACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR CCA 90 bp ACAGTTTGGAAGCATGACAAACTTGGAATGACAAGAATGTCATCGTaGGCGGCCCTAATACCTCTGCCCTGTGGATATCTTAACCACCAC +
Preference number: 1 (lower is better)
Translates to: TVWKHDKLGMTRMSS*AALIPLPCGYLNHH
Trigger: GTGGTGGTTAAGATATCCACAGGGCAGAGGTATTAGGGCCGCCCACGATGACATTCTTGTCATTCCAAGTTTGTCATGCTTCCAAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR TCA 90 bp AATGTGTTCATTGGAAAGGTGAAAAGCATGGACAGTTTGGAAGCATaGCAAACTTGGAATGACAAGAATGTCATCGTGGGCGGCCCTAAT +
Preference number: 1 (lower is better)
Translates to: NVFIGKVKSMDSLEA*QTWNDKNVIVGGPN
Trigger: ATTAGGGCCGCCCACGATGACATTCTTGTCATTCCAAGTTTGTCATGCTTCCAAACTGTCCATGCTTTTCACCTTTCCAATGAACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR CCA 90 bp TCTCAATCATCCACACTACTCATGATTCATCTCACTATGGTTCTCTaGGTTCCTTTTGTTCTTTATTCACCTCAAAGTCTAGGTAGGTGG +
Preference number: 1 (lower is better)
Translates to: SQSSTLLMIHLTMVL*VPFVLYSPQSLGRW
Trigger: CCACCTACCTAGACTTTGAGGTGAATAAAGAACAAAAGGAACCCAGAGAACCATAGTGAGATGAATCATGAGTAGTGTGGATGATTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR TCA 90 bp CTCAATCCTTCAAAAGAGTGCCATCTCAATCATCCACACTACTCATaGTTCATCTCACTATGGTTCTCTGGGTTCCTTTTGTTCTTTATT +
Preference number: 1 (lower is better)
Translates to: LNPSKECHLNHPHYS*FISLWFSGFLLFFI
Trigger: AATAAAGAACAAAAGGAACCCAGAGAACCATAGTGAGATGAATCATGAGTAGTGTGGATGATTGAGATGGCACTCTTTTGAAGGATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR GCA 90 bp TTTCCTGTGAAGAACTCAGTGGGAAGGAAGTGGCCATTGAGGTTTTGCAGGCATGTTGAACCCGTGGGCTaGATCTCCTTTGAGATGTTT +
Preference number: 2 (lower is better)
Translates to: FPVKNSVGRKWPLRFCRHVEPVG*ISFEMF
Trigger: AAACATCTCAAAGGAGATGCAGCCCACGGGTTCAAC...ATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTTCACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CCA 90 bp TTTCCTGTGAAGAACTCAGTGGGAAGGAAGTGGCCATTGAGGTTTTGCAGGCATTTGATGTTGAACCCGTaGGCTGCATCTCCTTTGAGA +
Preference number: 2 (lower is better)
Translates to: FPVKNSVGRKWPLRFCRHLMLNP*AASPLR
Trigger: TCTCAAAGGAGATGCAGCCCACGGGTTCAACATCAA...ATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTTCACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR CAA 90 bp GTTTTTCCCTGCAGCCCATTGAACTTTGATCAAGCCCAGTCCTCTTaGATATTGTGTTTGATGTTGAACCCGTGGGCTGCATCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: VFPCSPLNFDQAQSS*ILCLMLNPWAASPL
Trigger: CAAAGGAGATGCAGCCCACGGGTTCAACATCAAACACAATATCAAAGAGGACTGGGCTTGATCAAAGTTCAATGGGCTGCAGGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR TCA 90 bp TTTCCTGTGAAGAACTCAGTGGGAAGGAAGTGGCCATTGAGGTTTTGCAGGCATTGTTCATTGGAAAGGTaGAAAGCATGGACAGTTTGG +
Preference number: 2 (lower is better)
Translates to: FPVKNSVGRKWPLRFCRHCSLER*KAWTVW
Trigger: CCAAACTGTCCATGCTTTTCACCTTTCCAATGAACA...ATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTTCACAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR GCA 90 bp TTTCCTGTGAAGAACTCAGTGGGAAGGAAGTGGCCATTGAGGTTTTGCAGGCATAATCCTTCAAAAGAGTaGCATCTCAATCATCCACAC +
Preference number: 2 (lower is better)
Translates to: FPVKNSVGRKWPLRFCRHNPSKE*HLNHPH
Trigger: GTGTGGATGATTGAGATGGCACTCTTTTGAAGGATT...ATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTTCACAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR GCA 90 bp AACTTTGATCAAGCCCAGTCCTCTTTGATATTGTGTTTGATGTTGAACCCGTGGCCAGCAAGGTGGTACTaGACATACCATACTCACACT +
Preference number: 2 (lower is better)
Translates to: NFDQAQSSLILCLMLNPWPARWY*TYHTHT
Trigger: AGTGTGAGTATGGTATGTGCAGTACCACCTTGCTGG...CCACGGGTTCAACATCAAACACAATATCAAAGAGGACTGGGCTTGATCAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR TCA 90 bp CTCCTTGTTGTTGTGTATGTTAATTATCTATGGCCTCATTCATCAGCCTGTCTATTCCCTGCAGCCCATTaGACTTTGATCAAGCCCAGT +
Preference number: 2 (lower is better)
Translates to: LLVVVYVNYLWPHSSACLFPAAH*TLIKPS
Trigger: ACTGGGCTTGATCAAAGTTCAATGGGCTGCAGGGAA...TAGACAGGCTGATGAATGAGGCCATAGATAATTAACATACACAACAACAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CCA 90 bp TTTCCTGTGAAGAACTCAGTGGGAAGGAAGTGGCCATTGAGGTTTTGCAGGCATCTCACTATGGTTCTCTaGGTTCCTTTTGTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: FPVKNSVGRKWPLRFCRHLTMVL*VPFVLY
Trigger: ATAAAGAACAAAAGGAACCCAGAGAACCATAGTGAG...ATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTTCACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR TCA 90 bp AACTTTGATCAAGCCCAGTCCTCTTTGATATTGTGTTTGATGTTGAACCCGTGGATGACAAACTTGGAATaGCAAGAATGTCATCGTGGG +
Preference number: 2 (lower is better)
Translates to: NFDQAQSSLILCLMLNPWMTNLE*QECHRG
Trigger: CCCACGATGACATTCTTGTCATTCCAAGTTTGTCAT...CCACGGGTTCAACATCAAACACAATATCAAAGAGGACTGGGCTTGATCAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR TCA 90 bp CTCCTTGTTGTTGTGTATGTTAATTATCTATGGCCTCATTCATCAGCCTGTCTAAGGACGATTTTCCTGTaGAGAACTCAGTGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LLVVVYVNYLWPHSSACLRTIFL*RTQWEG
Trigger: TCCTTCCCACTGAGTTCTTCACAGGAAAATCGTCCT...TAGACAGGCTGATGAATGAGGCCATAGATAATTAACATACACAACAACAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR GCA 90 bp GGGACAATTTTTGATGGATTTAGTTCTAGTTTCTGGGTTATGGTACTGCCTTTCCTGTATAGTCCTGGCTaGCCTGGAACTCACTTTGTA +
Preference number: 2 (lower is better)
Translates to: GTIFDGFSSSFWVMVLPFLYSPG*PGTHFV
Trigger: TACAAAGTGAGTTCCAGGGCAGCCAGGACTATACAG...GAAAGGCAGTACCATAACCCAGAAACTAGAACTAAATCCATCAAAAATTGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CCA 90 bp AGGAATAAAAGCTTTGAAGATGCTGTTTTTCCCTGCAGCCCATTGAACTTTGATATTCATCCAGCAAGGTaGTACTGCACATACCATACT +
Preference number: 2 (lower is better)
Translates to: RNKSFEDAVFPCSPLNFDIHPAR*YCTYHT
Trigger: AGTATGGTATGTGCAGTACCACCTTGCTGGATGAAT...ATCAAAGTTCAATGGGCTGCAGGGAAAAACAGCATCTTCAAAGCTTTTATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CCA 90 bp AGGAATAAAAGCTTTGAAGATGCTGTTTTTCCCTGCAGCCCATTGAACTTTGATAAAGCATGGACAGTTTaGAAGCATGACAAACTTGGA +
Preference number: 2 (lower is better)
Translates to: RNKSFEDAVFPCSPLNFDKAWTV*KHDKLG
Trigger: TCCAAGTTTGTCATGCTTCCAAACTGTCCATGCTTT...ATCAAAGTTCAATGGGCTGCAGGGAAAAACAGCATCTTCAAAGCTTTTATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR GCA 90 bp CTCCTTGTTGTTGTGTATGTTAATTATCTATGGCCTCATTCATCAGCCTGTCTAAACTTTCCTCTCACATaGTCATCTAATTTTCCTCAT +
Preference number: 2 (lower is better)
Translates to: LLVVVYVNYLWPHSSACLNFPLT*SSNFPH
Trigger: ATGAGGAAAATTAGATGAGCATGTGAGAGGAAAGTT...TAGACAGGCTGATGAATGAGGCCATAGATAATTAACATACACAACAACAAGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CCA 90 bp GGGACAATTTTTGATGGATTTAGTTCTAGTTTCTGGGTTATGGTACTGCCTTTCCAAAAATGTGTTCATTaGAAAGGTGAAAAGCATGGA +
Preference number: 2 (lower is better)
Translates to: GTIFDGFSSSFWVMVLPFQKCVH*KGEKHG
Trigger: TCCATGCTTTTCACCTTTCCAATGAACACATTTTTG...GAAAGGCAGTACCATAACCCAGAAACTAGAACTAAATCCATCAAAAATTGTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CCA 90 bp CTCCTTGTTGTTGTGTATGTTAATTATCTATGGCCTCATTCATCAGCCTGTCTACTGATCTTGACAGCATaGTTTGTAACAGTAAATGAT +
Preference number: 2 (lower is better)
Translates to: LLVVVYVNYLWPHSSACLLILTA*FVTVND
Trigger: ATCATTTACTGTTACAAACCATGCTGTCAAGATCAG...TAGACAGGCTGATGAATGAGGCCATAGATAATTAACATACACAACAACAAGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CCA 90 bp GGGACAATTTTTGATGGATTTAGTTCTAGTTTCTGGGTTATGGTACTGCCTTTCTATGTTAATTATCTATaGCCTCATTCATCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: GTIFDGFSSSFWVMVLPFYVNYL*PHSSAC
Trigger: ACAGGCTGATGAATGAGGCCATAGATAATTAACATA...GAAAGGCAGTACCATAACCCAGAAACTAGAACTAAATCCATCAAAAATTGTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR CCA 72 bp GACGATTTTCCTGTGAAGAACTCAGTGGGAAGGAAGTaGCCATTGAGGTTTTGCAGGCATACTCATGAGGGC +
Preference number: 3 (lower is better)
Translates to: DDFPVKNSVGRK*PLRFCRHTHEG
Trigger: GCCCTCATGAGTATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTTCACAGGAAAATCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR GCA 72 bp AAGAACTCAGTGGGAAGGAAGTGGCCATTGAGGTTTTaGAGGCATACTCATGAGGGCTATGGAGCTAATGTT +
Preference number: 3 (lower is better)
Translates to: KNSVGRKWPLRF*RHTHEGYGANV
Trigger: AACATTAGCTCCATAGCCCTCATGAGTATGCCTGCAAAACCTCAATGGCCACTTCCTTCCCACTGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR CCA 72 bp AAGCATGACAAACTTGGAATGACAAGAATGTCATCGTaGGCGGCCCTAATACCTCTGCCCTGTGGATATCTT +
Preference number: 3 (lower is better)
Translates to: KHDKLGMTRMSS*AALIPLPCGYL
Trigger: AAGATATCCACAGGGCAGAGGTATTAGGGCCGCCCACGATGACATTCTTGTCATTCCAAGTTTGTCATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR TCA 72 bp ATTGGAAAGGTGAAAAGCATGGACAGTTTGGAAGCATaGCAAACTTGGAATGACAAGAATGTCATCGTGGGC +
Preference number: 3 (lower is better)
Translates to: IGKVKSMDSLEA*QTWNDKNVIVG
Trigger: GCCCACGATGACATTCTTGTCATTCCAAGTTTGTCATGCTTCCAAACTGTCCATGCTTTTCACCTTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR GCA 72 bp AGGCATACTCATGAGGGCTATGGAGCTAATGTTCTGTaGTACATCCTAGTTAGCTTAGAAAACCCAACAATG +
Preference number: 3 (lower is better)
Translates to: RHTHEGYGANVL*YILVSLENPTM
Trigger: CATTGTTGGGTTTTCTAAGCTAACTAGGATGTAGCACAGAACATTAGCTCCATAGCCCTCATGAGTATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR TCA 72 bp TCAAAAGAGTGCCATCTCAATCATCCACACTACTCATaGTTCATCTCACTATGGTTCTCTGGGTTCCTTTTG +
Preference number: 3 (lower is better)
Translates to: SKECHLNHPHYS*FISLWFSGFLL
Trigger: CAAAAGGAACCCAGAGAACCATAGTGAGATGAATCATGAGTAGTGTGGATGATTGAGATGGCACTCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CAA 90 bp AGGAATAAAAGCTTTGAAGATGCTGTTTTTCCCTGCAGCCCATTGAACTTTGATTCTCCAAAACCAACATaGGGAGCTGGAATTCATTAC +
Preference number: 3 (lower is better)
Translates to: RNKSFEDAVFPCSPLNFDSPKPT*GAGIHY
Trigger: GTAATGAATTCCAGCTCCCAATGTTGGTTTTGGAGA...ATCAAAGTTCAATGGGCTGCAGGGAAAAACAGCATCTTCAAAGCTTTTATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CAA 90 bp AGGAATAAAAGCTTTGAAGATGCTGTTTTTCCCTGCAGCCCATTGAACTTTGATTCTTTGATATTGTGTTaGATGTTGAACCCGTGGGCT +
Preference number: 3 (lower is better)
Translates to: RNKSFEDAVFPCSPLNFDSLILC*MLNPWA
Trigger: AGCCCACGGGTTCAACATCAAACACAATATCAAAGA...ATCAAAGTTCAATGGGCTGCAGGGAAAAACAGCATCTTCAAAGCTTTTATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CAA 90 bp AGGAATAAAAGCTTTGAAGATGCTGTTTTTCCCTGCAGCCCATTGAACTTTGATCAGTCCTCTTTGATATaGTGTTTGATGTTGAACCCG +
Preference number: 3 (lower is better)
Translates to: RNKSFEDAVFPCSPLNFDQSSLI*CLMLNP
Trigger: CGGGTTCAACATCAAACACAATATCAAAGAGGACTG...ATCAAAGTTCAATGGGCTGCAGGGAAAAACAGCATCTTCAAAGCTTTTATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CAA 90 bp GGGACAATTTTTGATGGATTTAGTTCTAGTTTCTGGGTTATGGTACTGCCTTTCTTCTCTGGGTTCCTTTaGTTCTTTATTCACCTCAAA +
Preference number: 3 (lower is better)
Translates to: GTIFDGFSSSFWVMVLPFFSGFL*FFIHLK
Trigger: TTTGAGGTGAATAAAGAACAAAAGGAACCCAGAGAA...GAAAGGCAGTACCATAACCCAGAAACTAGAACTAAATCCATCAAAAATTGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR-3UTR CAA 90 bp CTCCTTGTTGTTGTGTATGTTAATTATCTATGGCCTCATTCATCAGCCTGTCTATGGACAATGTGTGTGTaGCACAGAAGTAAAATAATC +
Preference number: 3 (lower is better)
Translates to: LLVVVYVNYLWPHSSACLWTMCV*HRSKII
Trigger: GATTATTTTACTTCTGTGCAACACACACATTGTCCA...TAGACAGGCTGATGAATGAGGCCATAGATAATTAACATACACAACAACAAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR GCA 72 bp AAAAAGATCTCTTGGTACCAGCTAGTCTGTAATTCATaGTCTGATGGAAGTAGCACCATGATTGACATTTAT +
Preference number: 3 (lower is better)
Translates to: KKISWYQLVCNS*SDGSSTMIDIY
Trigger: ATAAATGTCAATCATGGTGCTACTTCCATCAGAGCATGAATTACAGACTAGCTGGTACCAAGAGATCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
3UTR TCA 72 bp ATGATTCAGGATGGGCTTTCCCTCTCTTTCTACGTATaGTCCAATGTTAAAATTACTAGCTATTTTATAGTG +
Preference number: 3 (lower is better)
Translates to: MIQDGLSLSFYV*SNVKITSYFIV
Trigger: CACTATAAAATAGCTAGTAATTTTAACATTGGATCATACGTAGAAAGAGAGGGAAAGCCCATCCTGAATCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
CDS-3UTR TCA 90 bp CATGTGAGCCAGGGTGCTCACAGAATCTCAGGACGATTTTCCTGTGAAGAACTCGGATGGAAGCTGCAATaGGAGTGTATGAACATAGGA +
Preference number: 4 (lower is better)
Translates to: HVSQGAHRISGRFSCEELGWKLQ*ECMNIG
Trigger: TCCTATGTTCATACACTCTCATTGCAGCTTCCATCC...GAGTTCTTCACAGGAAAATCGTCCTGAGATTCTGTGAGCACCCTGGCTCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
CDS-3UTR GCA 90 bp CTCCTTGTTGTTGTGTATGTTAATTATCTATGGCCTCATTCATCAGCCTGTCTAAAACCGGGCTGTGTCTaGACAGACCAGCCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LLVVVYVNYLWPHSSACLKPGCV*TDQPQH
Trigger: GTGCTGAGGCTGGTCTGTGCAGACACAGCCCGGTTT...TAGACAGGCTGATGAATGAGGCCATAGATAATTAACATACACAACAACAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
CDS-3UTR TCA 90 bp CTCCTTGTTGTTGTGTATGTTAATTATCTATGGCCTCATTCATCAGCCTGTCTAGACAACGACGAGATGTaGGGAACAGGTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLVVVYVNYLWPHSSACLDNDEM*GTGGEG
Trigger: GCCTTCTCCACCTGTTCCTCACATCTCGTCGTTGTC...TAGACAGGCTGATGAATGAGGCCATAGATAATTAACATACACAACAACAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2
CDS-3UTR CAA 90 bp AACTTTGATCAAGCCCAGTCCTCTTTGATATTGTGTTTGATGTTGAACCCGTGGCTGAGGGCCAGGGCCTaGTGGAAAGTTCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: NFDQAQSSLILCLMLNPWLRARA*WKVLLS
Trigger: ACTCAGCAGAACTTTCCACAAGGCCCTGGCCCTCAG...CCACGGGTTCAACATCAAACACAATATCAAAGAGGACTGGGCTTGATCAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214429.2