Pregenerated sensors for OLFR711 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045013Ensembl transcript IDs: ENSMUST00000051715.8, ENSMUST00000207200.3, ENSMUST00000216335.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCAGACAACCATGGCAAGCATTGTAAAAATGAAGGAGTTGCTTTaGGCTCTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAG | + |
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Preference number: 1 (lower is better) Translates to: TQTTMASIVKMKELL*ALKGLVLWQRVKHK Trigger: CTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAGAGCTCAAAGCAACTCCTTCATTTTTACAATGCTTGCCATGGTTGTCTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR GCA 90 bp | AGAGTTGTTATCACAGATCAGAGATGCAGAGAGAACCTGATAGAATaGATTTTTAAGCTAGATCTCCTGGGCTCAGACAAAGGCTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: RVVITDQRCRENLIE*IFKLDLLGSDKGFD Trigger: ATCAAAGCCTTTGTCTGAGCCCAGGAGATCTAGCTTAAAAATGCATTCTATCAGGTTCTCTCTGCATCTCTGATCTGTGATAACAACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATACCCAATGGGAGTCAAACACAAGCTaGCAGCTGAGAATCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LECSSILPVFSHLLHTQWESNTS*QLRICH Trigger: ATGACAGATTCTCAGCTGTCAGCTTGTGTTTGACTC...CCATTGGGTATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR TCA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGTGCCTCCCTACCACATaGATAAAAAGCATGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: YNRHMCVQIYSCACRSQWCLPTT*IKSMSH Trigger: GTGAGACATGCTTTTTATTCATGTGGTAGGGAGGCA...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATTATTTTAGCCACTGGTaGTCATCATCAAGAACACTA | + |
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Preference number: 2 (lower is better) Translates to: LKGLVLWQRVKHKLTAENYFSHW*SSSRTL Trigger: TAGTGTTCTTGATGATGAGCACCAGTGGCTAAAATA...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATGAGAACCTGATAGAATaGATTTTTAAGCTAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: LKGLVLWQRVKHKLTAENENLIE*IFKLDL Trigger: GAGATCTAGCTTAAAAATGCATTCTATCAGGTTCTC...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATTATTATTTTAGCCACTaGTGCTCATCATCAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: LKGLVLWQRVKHKLTAENYYFSH*CSSSRT Trigger: TGTTCTTGATGATGAGCACCAGTGGCTAAAATAATA...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGATCACAGATCAGAGATaGAGAGAGAACCTGATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YNRHMCVQIYSCACRSQWITDQR*RENLIE Trigger: TTCTATCAGGTTCTCTCTGCATCTCTGATCTGTGAT...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | ATATACAGTTGTGCTTGTAGAAGCCAGTGGACATCTCAAATTCCATCTCTCAAGATCACAGATCAGAGATaGAGAGAGAACCTGATAGAA | + |
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Preference number: 2 (lower is better) Translates to: IYSCACRSQWTSQIPSLKITDQR*RENLIE Trigger: TTCTATCAGGTTCTCTCTGCATCTCTGATCTGTGAT...CTTGAGAGATGGAATTTGAGATGTCCACTGGCTTCTACAAGCACAACTGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATACCCAATGGATAGTCAGCTCAACTTaGTCCTGTATCATTGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: LECSSILPVFSHLLHTQWIVSST*SCIIES Trigger: TGATTCAATGATACAGGAGCAAGTTGAGCTGACTAT...CCATTGGGTATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCAAATTTGGGTCCTCATATTTGTGTACCCAGTACTTTAACAACTATGGAGAGTCAAACACAAGCTaGCAGCTGAGAATCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: EIKFGSSYLCTQYFNNYGESNTS*QLRICH Trigger: ATGACAGATTCTCAGCTGTCAGCTTGTGTTTGACTC...TCCATAGTTGTTAAAGTACTGGGTACACAAATATGAGGACCCAAATTTGATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCAAATTTGGGTCCTCATATTTGTGTACCCAGTACTTTAACAACTATGGAATGAAGGAGTTGCTTTaGGCTCTAAAGGGGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: EIKFGSSYLCTQYFNNYGMKELL*ALKGLV Trigger: AACAAGCCCCTTTAGAGCTCAAAGCAACTCCTTCAT...TCCATAGTTGTTAAAGTACTGGGTACACAAATATGAGGACCCAAATTTGATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATACCCAATGGGAGAACCTGATAGAATaGATTTTTAAGCTAGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: LECSSILPVFSHLLHTQWENLIE*IFKLDL Trigger: GAGATCTAGCTTAAAAATGCATTCTATCAGGTTCTC...CCATTGGGTATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | ATATACAGTTGTGCTTGTAGAAGCCAGTGGACATCTCAAATTCCATCTCTCAAGTATTTTAGCCACTGGTaGTCATCATCAAGAACACTA | + |
|
Preference number: 2 (lower is better) Translates to: IYSCACRSQWTSQIPSLKYFSHW*SSSRTL Trigger: TAGTGTTCTTGATGATGAGCACCAGTGGCTAAAATA...CTTGAGAGATGGAATTTGAGATGTCCACTGGCTTCTACAAGCACAACTGTATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CCA 90 bp | ATATACAGTTGTGCTTGTAGAAGCCAGTGGACATCTCAAATTCCATCTCTCAAGTTTTTACATGGGCACTaGAAATCAAATTTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: IYSCACRSQWTSQIPSLKFLHGH*KSNLGP Trigger: AGGACCCAAATTTGATTTCCAGTGCCCATGTAAAAA...CTTGAGAGATGGAATTTGAGATGTCCACTGGCTTCTACAAGCACAACTGTATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CCA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGTTTTTACATGGGCACTaGAAATCAAATTTGGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: YNRHMCVQIYSCACRSQWFLHGH*KSNLGP Trigger: AGGACCCAAATTTGATTTCCAGTGCCCATGTAAAAA...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGGAGAACCTGATAGAATaGATTTTTAAGCTAGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: YNRHMCVQIYSCACRSQWENLIE*IFKLDL Trigger: GAGATCTAGCTTAAAAATGCATTCTATCAGGTTCTC...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | AATATTGGCCTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATTATTTTAGCCACTGGTaGTCATCATCAAGAACACTA | + |
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Preference number: 2 (lower is better) Translates to: NIGLECSSILPVFSHLLHYFSHW*SSSRTL Trigger: TAGTGTTCTTGATGATGAGCACCAGTGGCTAAAATA...ATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAGGCCAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR GCA 90 bp | AATATTGGCCTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATATAGTCAGCTCAACTTaGTCCTGTATCATTGAATCA | + |
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Preference number: 2 (lower is better) Translates to: NIGLECSSILPVFSHLLHIVSST*SCIIES Trigger: TGATTCAATGATACAGGAGCAAGTTGAGCTGACTAT...ATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAGGCCAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CCA 90 bp | ATATACAGTTGTGCTTGTAGAAGCCAGTGGACATCTCAAATTCCATCTCTCAAGTATTATTTTAGCCACTaGTGCTCATCATCAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: IYSCACRSQWTSQIPSLKYYFSH*CSSSRT Trigger: TGTTCTTGATGATGAGCACCAGTGGCTAAAATAATA...CTTGAGAGATGGAATTTGAGATGTCCACTGGCTTCTACAAGCACAACTGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CCA 90 bp | ATATACAGTTGTGCTTGTAGAAGCCAGTGGACATCTCAAATTCCATCTCTCAAGACTGGAAATCAAATTTaGGTCCTCATATTTGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: IYSCACRSQWTSQIPSLKTGNQI*VLIFVY Trigger: GTACACAAATATGAGGACCCAAATTTGATTTCCAGT...CTTGAGAGATGGAATTTGAGATGTCCACTGGCTTCTACAAGCACAACTGTATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CCA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGACTGGAAATCAAATTTaGGTCCTCATATTTGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: YNRHMCVQIYSCACRSQWTGNQI*VLIFVY Trigger: GTACACAAATATGAGGACCCAAATTTGATTTCCAGT...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CCA 90 bp | AATATTGGCCTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATTATTATTTTAGCCACTaGTGCTCATCATCAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: NIGLECSSILPVFSHLLHYYFSH*CSSSRT Trigger: TGTTCTTGATGATGAGCACCAGTGGCTAAAATAATA...ATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAGGCCAATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR TCA 72 bp | ACCATGGCAAGCATTGTAAAAATGAAGGAGTTGCTTTaGGCTCTAAAGGGGCTTGTTCTATGGCAGAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: TMASIVKMKELL*ALKGLVLWQRV Trigger: GACTCTCTGCCATAGAACAAGCCCCTTTAGAGCTCAAAGCAACTCCTTCATTTTTACAATGCTTGCCATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CAA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATCTACGAGAAATTAGTTaGATGGCTAATATTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LKGLVLWQRVKHKLTAENLREIS*MANILQ Trigger: CTGGAGAATATTAGCCATCAAACTAATTTCTCGTAG...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CAA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGAATGAAGGAGTTGCTTaGAGCTCTAAAGGGGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: YNRHMCVQIYSCACRSQWNEGVA*SSKGAC Trigger: ACAAGCCCCTTTAGAGCTCAAAGCAACTCCTTCATT...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR GCA 72 bp | ATCACAGATCAGAGATGCAGAGAGAACCTGATAGAATaGATTTTTAAGCTAGATCTCCTGGGCTCAGACAAA | + |
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Preference number: 3 (lower is better) Translates to: ITDQRCRENLIE*IFKLDLLGSDK Trigger: TTTGTCTGAGCCCAGGAGATCTAGCTTAAAAATGCATTCTATCAGGTTCTCTCTGCATCTCTGATCTGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATACCCAATGGCTACGAGAAATTAGTTaGATGGCTAATATTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LECSSILPVFSHLLHTQWLREIS*MANILQ Trigger: CTGGAGAATATTAGCCATCAAACTAATTTCTCGTAG...CCATTGGGTATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR-3UTR CAA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGCTACGAGAAATTAGTTaGATGGCTAATATTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: YNRHMCVQIYSCACRSQWLREIS*MANILQ Trigger: CTGGAGAATATTAGCCATCAAACTAATTTCTCGTAG...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR CCA 72 bp | TGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTaGACATCTCAAATTCCATCTCTCAAGAAGTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: CVQIYSCACRSQ*TSQIPSLKKLF Trigger: AAACAACTTCTTGAGAGATGGAATTTGAGATGTCCACTGGCTTCTACAAGCACAACTGTATATTTGCACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR TCA 72 bp | ATCACTAGATTGTGTTTTCCCTACGAGAAATTAGTTTaGTGGCTAATATTCTCCAGAGTTGTTATCACAGAT | + |
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Preference number: 3 (lower is better) Translates to: ITRLCFPYEKLV*WLIFSRVVITD Trigger: ATCTGTGATAACAACTCTGGAGAATATTAGCCATCAAACTAATTTCTCGTAGGGAAAACACAATCTAGTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CCA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATCAAAGCAGGAAGCACTaGCCACCTCCCAGAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LKGLVLWQRVKHKLTAENQSRKH*PPPRVF Trigger: GAAGACTCTGGGAGGTGGCCAGTGCTTCCTGCTTTG...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR TCA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATGAGTCATACAGCCTGTaGAGGAGATGTGCCGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LKGLVLWQRVKHKLTAENESYSL*RRCAVS Trigger: AGAGACGGCACATCTCCTTCACAGGCTGTATGACTC...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR GCA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATCCTGTGAAGGAGATGTaGCGTCTCTGCAGGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LKGLVLWQRVKHKLTAENPVKEM*RLCRRN Trigger: ATTCCTCCTGCAGAGACGGCACATCTCCTTCACAGG...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR GCA 90 bp | CTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATACCCAATGGCCTGTGAAGGAGATGTaGCGTCTCTGCAGGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LECSSILPVFSHLLHTQWPVKEM*RLCRRN Trigger: ATTCCTCCTGCAGAGACGGCACATCTCCTTCACAGG...CCATTGGGTATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CCA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGCAAAGCAGGAAGCACTaGCCACCTCCCAGAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YNRHMCVQIYSCACRSQWQSRKH*PPPRVF Trigger: GAAGACTCTGGGAGGTGGCCAGTGCTTCCTGCTTTG...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR TCA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATTGGGTCGGACGTACATaGAAATCATGGCTGTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: LKGLVLWQRVKHKLTAENWVGRT*KSWLCN Trigger: ATTACACAGCCATGATTTTCATGTACGTCCGACCCA...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CCA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATCTACTAGCTCAGCTGTaGACATATCTTTGCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: LKGLVLWQRVKHKLTAENLLAQL*TYLCMP Trigger: TGGCATGCAAAGATATGTCCACAGCTGAGCTAGTAG...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CCA 90 bp | ATATACAGTTGTGCTTGTAGAAGCCAGTGGACATCTCAAATTCCATCTCTCAAGGCCTTCTTTCTTCCCTaGGTGGAGGGTATACGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IYSCACRSQWTSQIPSLKAFFLP*VEGIRR Trigger: TCTGCGTATACCCTCCACCCAGGGAAGAAAGAAGGC...CTTGAGAGATGGAATTTGAGATGTCCACTGGCTTCTACAAGCACAACTGTATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CCA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGGCCTTCTTTCTTCCCTaGGTGGAGGGTATACGCAGA | + |
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Preference number: 4 (lower is better) Translates to: YNRHMCVQIYSCACRSQWAFFLP*VEGIRR Trigger: TCTGCGTATACCCTCCACCCAGGGAAGAAAGAAGGC...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CCA 90 bp | AATATTGGCCTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATCAAAGCAGGAAGCACTaGCCACCTCCCAGAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NIGLECSSILPVFSHLLHQSRKH*PPPRVF Trigger: GAAGACTCTGGGAGGTGGCCAGTGCTTCCTGCTTTG...ATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAGGCCAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CCA 90 bp | AATATTGGCCTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATGCCTTCTTTCTTCCCTaGGTGGAGGGTATACGCAGA | + |
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Preference number: 4 (lower is better) Translates to: NIGLECSSILPVFSHLLHAFFLP*VEGIRR Trigger: TCTGCGTATACCCTCCACCCAGGGAAGAAAGAAGGC...ATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAGGCCAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR GCA 90 bp | CTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATACCCAATGGCAGAGTCTTCTTGATTaGATCCTTGACTTCCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: LECSSILPVFSHLLHTQWQSLLD*ILDFPV Trigger: AACCGGGAAGTCAAGGATGCAATCAAGAAGACTCTG...CCATTGGGTATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| 3UTR CAA 72 bp | AACCATGGCAAGCATTGTAAAAATGAAGGAGTTGCTTaGAGCTCTAAAGGGGCTTGTTCTATGGCAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: NHGKHCKNEGVA*SSKGACSMAES Trigger: ACTCTCTGCCATAGAACAAGCCCCTTTAGAGCTCAAAGCAACTCCTTCATTTTTACAATGCTTGCCATGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR TCA 90 bp | GAAATCAAATTTGGGTCCTCATATTTGTGTACCCAGTACTTTAACAACTATGGAGAGTCATACAGCCTGTaGAGGAGATGTGCCGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: EIKFGSSYLCTQYFNNYGESYSL*RRCAVS Trigger: AGAGACGGCACATCTCCTTCACAGGCTGTATGACTC...TCCATAGTTGTTAAAGTACTGGGTACACAAATATGAGGACCCAAATTTGATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR TCA 90 bp | AATATTGGCCTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATCTCTGTGCAGGCAAGTaGGATAAAGAAGTAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: NIGLECSSILPVFSHLLHLCAGK*DKEVEL Trigger: CAGCTCTACTTCTTTATCTCACTTGCCTGCACAGAG...ATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAGGCCAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR TCA 90 bp | CTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATACCCAATGGCTTTGCATGCCAATTTaGGGATTGGTGAGATATCAC | + |
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Preference number: 4 (lower is better) Translates to: LECSSILPVFSHLLHTQWLCMPI*GLVRYH Trigger: GTGATATCTCACCAATCCTCAAATTGGCATGCAAAG...CCATTGGGTATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR GCA 90 bp | CTAGAATGTTCATCCATTCTGCCAGTATTTTCCCACTTACTGCATACCCAATGGATTGGAATTAAAAGATaGAATAGCCCTGGGTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: LECSSILPVFSHLLHTQWIGIKR*NSPGSD Trigger: GTCCGACCCAGGGCTATTGCATCTTTTAATTCCAAT...CCATTGGGTATGCAGTAAGTGGGAAAATACTGGCAGAATGGATGAACATTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR GCA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGATTGGAATTAAAAGATaGAATAGCCCTGGGTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: YNRHMCVQIYSCACRSQWIGIKR*NSPGSD Trigger: GTCCGACCCAGGGCTATTGCATCTTTTAATTCCAAT...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR TCA 90 bp | GAAATCAAATTTGGGTCCTCATATTTGTGTACCCAGTACTTTAACAACTATGGACTCTGTGCAGGCAAGTaGGATAAAGAAGTAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: EIKFGSSYLCTQYFNNYGLCAGK*DKEVEL Trigger: CAGCTCTACTTCTTTATCTCACTTGCCTGCACAGAG...TCCATAGTTGTTAAAGTACTGGGTACACAAATATGAGGACCCAAATTTGATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR TCA 90 bp | GAAATCAAATTTGGGTCCTCATATTTGTGTACCCAGTACTTTAACAACTATGGATGGGTCGGACGTACATaGAAATCATGGCTGTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: EIKFGSSYLCTQYFNNYGWVGRT*KSWLCN Trigger: ATTACACAGCCATGATTTTCATGTACGTCCGACCCA...TCCATAGTTGTTAAAGTACTGGGTACACAAATATGAGGACCCAAATTTGATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CCA 90 bp | GAAATCAAATTTGGGTCCTCATATTTGTGTACCCAGTACTTTAACAACTATGGACTACTAGCTCAGCTGTaGACATATCTTTGCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: EIKFGSSYLCTQYFNNYGLLAQL*TYLCMP Trigger: TGGCATGCAAAGATATGTCCACAGCTGAGCTAGTAG...TCCATAGTTGTTAAAGTACTGGGTACACAAATATGAGGACCCAAATTTGATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CAA 90 bp | CTAAAGGGGCTTGTTCTATGGCAGAGAGTCAAACACAAGCTGACAGCTGAGAATCCTCCCAGAGTCTTCTaGATTGCATCCTTGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: LKGLVLWQRVKHKLTAENPPRVF*IASLTS Trigger: GGAAGTCAAGGATGCAATCAAGAAGACTCTGGGAGG...ATTCTCAGCTGTCAGCTTGTGTTTGACTCTCTGCCATAGAACAAGCCCCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CAA 90 bp | ATATACAGTTGTGCTTGTAGAAGCCAGTGGACATCTCAAATTCCATCTCTCAAGCCTCCCAGAGTCTTCTaGATTGCATCCTTGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: IYSCACRSQWTSQIPSLKPPRVF*IASLTS Trigger: GGAAGTCAAGGATGCAATCAAGAAGACTCTGGGAGG...CTTGAGAGATGGAATTTGAGATGTCCACTGGCTTCTACAAGCACAACTGTATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS-3UTR CAA 90 bp | TATAATAGGCACATGTGTGTGCAAATATACAGTTGTGCTTGTAGAAGCCAGTGGCCTCCCAGAGTCTTCTaGATTGCATCCTTGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: YNRHMCVQIYSCACRSQWPPRVF*IASLTS Trigger: GGAAGTCAAGGATGCAATCAAGAAGACTCTGGGAGG...CCACTGGCTTCTACAAGCACAACTGTATATTTGCACACACATGTGCCTATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS CAA 72 bp | AAAGCAAAGTCTACTAGCTCAGCTGTGGACATATCTTaGCATGCCAATTTGAGGATTGGTGAGATATCACAG | + |
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Preference number: 6 (lower is better) Translates to: KAKSTSSAVDIS*HANLRIGEISQ Trigger: CTGTGATATCTCACCAATCCTCAAATTGGCATGCAAAGATATGTCCACAGCTGAGCTAGTAGACTTTGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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| CDS CAA 90 bp | TTAAGCATGGGTGTGAGGACAGCATATACAGCTGAAATGAGTTTATaGGAATTAAAAGATGCAATAGCCCTGGGTCGGACGTACATGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSMGVRTAYTAEMSL*ELKDAIALGRTYMK Trigger: TTTCATGTACGTCCGACCCAGGGCTATTGCATCTTTTAATTCCAATAAACTCATTTCAGCTGTATATGCTGTCCTCACACCCATGCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051715.8 ENSMUST00000207200.3 ENSMUST00000216335.2 |
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