Pregenerated sensors for OLFR71 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046450Ensembl transcript IDs: ENSMUST00000055401.2, ENSMUST00000107862.3, ENSMUST00000217544.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGGAAAGTGTGAGAGAAGGCTGGAAGCTAGGCCAGCGGGCGGGTaGGCGGAGGTCAGGGAGGCACCTCCAAGGCCCCAAAGAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: AGKCERRLEARPAGG*AEVREAPPRPQRAS Trigger: AGATGCTCTTTGGGGCCTTGGAGGTGCCTCCCTGACCTCCGCCCACCCGCCCGCTGGCCTAGCTTCCAGCCTTCTCTCACACTTTCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR TCA 90 bp | TGCTTTTGGTATAGGATTGGAAACCAAGAACACAGGAGAGGAGCCTaGAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: CFWYRIGNQEHRRGA*RGRKSICTCAVCCR Trigger: TCTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCTCTCCTGTGTTCTTGGTTTCCAATCCTATACCAAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CCA 90 bp | CTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGATGTTaGGACAGAGTAGGCTGTGATGCTTTCTGCTTTTGGTATAGGATT | + |
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Preference number: 1 (lower is better) Translates to: LHKQVQGLELDQAGC*DRVGCDAFCFWYRI Trigger: AATCCTATACCAAAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CCA 90 bp | GCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGAAAGAGCAATCAGTGTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDPITDGCEPPCGC*ELNSGPLKEQSVFL Trigger: TAAGAACACTGATTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGAACACAGGAGAGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGGCCCAGAGACTACTGTaGAGGCCCAGGGACAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: TKNTGEEPEGAGSPSAHAAQRLL*RPRDRC Trigger: GCACCTGTCCCTGGGCCTCCACAGTAGTCTCTGGGC...CGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCTCTCCTGTGTTCTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR GCA 90 bp | CGGGTGGGCGGAGGTCAGGGAGGCACCTCCAAGGCCCCAAAGAGCATCTGCTTCCCTCAGTTTCACAAATaGTGGTATTGTAGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RVGGGQGGTSKAPKSICFPQFHK*WYCRCE Trigger: CTCACACCTACAATACCAGCATTTGTGAAACTGAGG...GAAGCAGATGCTCTTTGGGGCCTTGGAGGTGCCTCCCTGACCTCCGCCCACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CCA 90 bp | TTCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGAGCCCAGAGACTACTGTaGAGGCCCAGGGACAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FTYALHKQVQGLELDQAGAQRLL*RPRDRC Trigger: GCACCTGTCCCTGGGCCTCCACAGTAGTCTCTGGGC...TCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGAGCGTAGGTGTGAGCAGCTaGACTAGCCAAATACTAACT | + |
|
Preference number: 2 (lower is better) Translates to: RSLKGQEVHLHMRCVLQSVGVSS*TSQILT Trigger: AGTTAGTATTTGGCTAGTGCAGCTGCTCACACCTAC...GCTCTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGGAGTTGGACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCAAGTCCATCTGCACATaGGCTGTGTGCTGCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLELDQAGCWDRVGCDAFKSICT*AVCCRA Trigger: AGCTCTGCAGCACACAGCGCATGTGCAGATGGACTT...GAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTCCAACTCCAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATGGTCCTCCTGATGCCCCACCAGGGAGAGACTGAAGCTGGCAATTCCAGTAGGCTGACTTCAAATTaGCCATCCTCCTGCCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KMVLLMPHQGETEAGNSSRLTSN*PSSCLS Trigger: ACTGAGGCAGGAGGATGGTCAATTTGAAGTCAGCCT...ACTGGAATTGCCAGCTTCAGTCTCTCCCTGGTGGGGCATCAGGAGGACCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CAA 90 bp | TTCATGTTCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTaGGACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FMFTYALHKQVQGLE*DQAGCWDRVGCDAF Trigger: GAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGAACATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR TCA 90 bp | TCACAGGCTGACTTCAAATTGACCATCCTCCTGCCTCAGTTTCACAAATGCTGGGGCAGGAGCAGAAAGTaGCTTGTGAGTGATTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SQADFKLTILLPQFHKCWGRSRK*LVSDSV Trigger: CACAGAATCACTCACAAGTCACTTTCTGCTCCTGCC...CCAGCATTTGTGAAACTGAGGCAGGAGGATGGTCAATTTGAAGTCAGCCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGATGTAGGTGTGAGCAGCTaGACTAGCCAAATACTAACT | + |
|
Preference number: 2 (lower is better) Translates to: SPMHFINKSRAWSWTRLDVGVSS*TSQILT Trigger: AGTTAGTATTTGGCTAGTGCAGCTGCTCACACCTAC...ATCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CAA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGAAAGAGCAATCAGTGTTCTTAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWE*NSGPLKEQSVFLTT Trigger: AGTGGTTAAGAACACTGATTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR GCA 90 bp | GACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCTGCTTTTGGTATCCTCAGTTTCACAAATaGTGGTATTGTAGGTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DQAGCWDRVGCDAFCFWYPQFHK*WYCRCE Trigger: CTCACACCTACAATACCAGCATTTGTGAAACTGAGG...ATACCAAAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CCA 90 bp | TTCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGACAGTTTCACAAATGCTaGTATTGTAGGTGTGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FTYALHKQVQGLELDQAGQFHKC*YCRCEQ Trigger: CTGCTCACACCTACAATACCAGCATTTGTGAAACTG...TCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGAGCATCTGCTTCATCCCGAGAGCAGTGAGGAGCTACTTACAGATGTCAAAAGTGACTTGTGAGTaGTTCTGTGTCAGGATTAGT | + |
|
Preference number: 2 (lower is better) Translates to: PKSICFIPRAVRSYLQMSKVTCE*FCVRIS Trigger: ACTAATCCTGACACAGAATCACTCACAAGTCACTTT...TGACATCTGTAAGTAGCTCCTCACTGCTCTCGGGATGAAGCAGATGCTCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGATTATTTATTTTCAGACTaGGTCTTACTATCACAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SPMHFINKSRAWSWTRLDYLFSD*VLLSQA Trigger: AGCCTGTGATAGTAAGACCCAGTCTGAAAATAAATA...ATCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTTCTGCTTTTGGTATAGGATTGGAAACCAAGAACACAGGAGAGGAGCCTAAAGTGACTTGTGAGTaGTTCTGTGTCAGGATTAGT | + |
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Preference number: 2 (lower is better) Translates to: MLSAFGIGLETKNTGEEPKVTCE*FCVRIS Trigger: ACTAATCCTGACACAGAATCACTCACAAGTCACTTT...AGGCTCCTCTCCTGTGTTCTTGGTTTCCAATCCTATACCAAAAGCAGAAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CCA 72 bp | TGTGGGGCTATGAGGCGGGAAAGTGTGAGAGAAGGCTaGAAGCTAGGCCAGCGGGCGGGTGGGCGGAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CGAMRRESVREG*KLGQRAGGRRS Trigger: TGACCTCCGCCCACCCGCCCGCTGGCCTAGCTTCCAGCCTTCTCTCACACTTTCCCGCCTCATAGCCCCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGCAGGCTGACTTCAAATaGACCATCCTCCTGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ERSLKGQEVHLHMRCVLQQADFK*TILLPQ Trigger: CTGAGGCAGGAGGATGGTCAATTTGAAGTCAGCCTG...CTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR GCA 72 bp | GGTCAGGGAGGCACCTCCAAGGCCCCAAAGAGCATCTaGTTCATCCCGAGAGCAGTGAGGAGCTACTTACAG | + |
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Preference number: 3 (lower is better) Translates to: GQGGTSKAPKSI*FIPRAVRSYLQ Trigger: CTGTAAGTAGCTCCTCACTGCTCTCGGGATGAAGCAGATGCTCTTTGGGGCCTTGGAGGTGCCTCCCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CCA 72 bp | AGGATGGGCAGTGTAGGGCAAGGGGAGGTTCATGATTaGCTGGTGTGTGGGGCTATGAGGCGGGAAAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: RMGSVGQGEVHD*LVCGAMRRESV Trigger: CACACTTTCCCGCCTCATAGCCCCACACACCAGCCAATCATGAACCTCCCCTTGCCCTACACTGCCCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR TCA 72 bp | CAGCAGCCTGGACCAGGACAGGGCAGGAGCAGAAAGTaGCTTGTGAGTGATTCTGTGTCAGGATTAGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: QQPGPGQGRSRK*LVSDSVSGLVG Trigger: TCCCACTAATCCTGACACAGAATCACTCACAAGTCACTTTCTGCTCCTGCCCTGTCCTGGTCCAGGCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR TCA 72 bp | AGGCCCCAAAGAGCATCTGCTTCATCCCGAGAGCAGTaGGGAGCTACTTACAGATGTCAGTCAGGAGAGCGA | + |
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Preference number: 3 (lower is better) Translates to: RPQRASASSREQ*GATYRCQSGER Trigger: TCGCTCTCCTGACTGACATCTGTAAGTAGCTCCTCACTGCTCTCGGGATGAAGCAGATGCTCTTTGGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR GCA 72 bp | GAAGTCCATCTGCACATGCGCTGTGTGCTGCAGAGCTaGTTCGTGGGGAGAACACAAAATTTGAGGATGGGC | + |
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Preference number: 3 (lower is better) Translates to: EVHLHMRCVLQS*FVGRTQNLRMG Trigger: GCCCATCCTCAAATTTTGTGTTCTCCCCACGAAGCAGCTCTGCAGCACACAGCGCATGTGCAGATGGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CAA 90 bp | AAAATGGTCCTCCTGATGCCCCACCAGGGAGAGACTGAAGCTGGCAATTCCAGTCAGGCTGACTTCAAATaGACCATCCTCCTGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: KMVLLMPHQGETEAGNSSQADFK*TILLPQ Trigger: CTGAGGCAGGAGGATGGTCAATTTGAAGTCAGCCTG...ACTGGAATTGCCAGCTTCAGTCTCTCCCTGGTGGGGCATCAGGAGGACCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CAA 90 bp | GAGTTGGACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCTGCTTTGGGAGAACACAAAATTaGAGGATGGGCAGTGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: ELDQAGCWDRVGCDAFCFGRTQN*RMGSVG Trigger: CCCTACACTGCCCATCCTCAAATTTTGTGTTCTCCC...AAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTCCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CCA 72 bp | GTCTCCATAGCTCCATGTTCTGTCCCACAGTGGTATTaGCATAGGCTGATCCACATAACAAGGGAAGACCCC | + |
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Preference number: 3 (lower is better) Translates to: VSIAPCSVPQWY*HRLIHITREDP Trigger: GGGGTCTTCCCTTGTTATGTGGATCAGCCTATGCCAATACCACTGTGGGACAGAACATGGAGCTATGGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CAA 90 bp | TCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGATGGGAGAACACAAAATTaGAGGATGGGCAGTGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: SPMHFINKSRAWSWTRLDGRTQN*RMGSVG Trigger: CCCTACACTGCCCATCCTCAAATTTTGTGTTCTCCC...ATCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTTGGAGTTGGACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCGCTTTTGGTATAGGATaGGAAACCAAGAACACAGGA | + |
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Preference number: 3 (lower is better) Translates to: GLELDQAGCWDRVGCDAFAFGIG*ETKNTG Trigger: TCCTGTGTTCTTGGTTTCCAATCCTATACCAAAAGC...GAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTCCAACTCCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR TCA 72 bp | ACCAGGACAGGGCAGGAGCAGAAAGTGACTTGTGAGTaGTTCTGTGTCAGGATTAGTGGGATTTGGTACTGT | + |
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Preference number: 3 (lower is better) Translates to: TRTGQEQKVTCE*FCVRISGIWYC Trigger: ACAGTACCAAATCCCACTAATCCTGACACAGAATCACTCACAAGTCACTTTCTGCTCCTGCCCTGTCCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGAAAGAGCAATCA | + |
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Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*ELNSGPLKEQS Trigger: TGATTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR GCA 72 bp | GCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCTaGTTTTGGTATAGGATTGGAAACCAAGAACACAGG | + |
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Preference number: 3 (lower is better) Translates to: AGCWDRVGCDAF*FWYRIGNQEHR Trigger: CCTGTGTTCTTGGTTTCCAATCCTATACCAAAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR GCA 72 bp | AGTTTCACAAATGCTGGTATTGTAGGTGTGAGCAGCTaGACTAGCCAAATACTAACTTGTCTTGAGGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SFTNAGIVGVSS*TSQILTCLEVS Trigger: GCTGACCTCAAGACAAGTTAGTATTTGGCTAGTGCAGCTGCTCACACCTACAATACCAGCATTTGTGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR TCA 72 bp | CTATTTATTTTCAGACTGGGTCTTACTATCACAGGCTaGCTTCAAATTGACCATCCTCCTGCCTCAGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: LFIFRLGLTITG*LQIDHPPASVS Trigger: TGAAACTGAGGCAGGAGGATGGTCAATTTGAAGTCAGCCTGTGATAGTAAGACCCAGTCTGAAAATAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | AGCGGGCGGGTGGGCGGAGGTCAGGGAGGCACCTCCAAGGCCCCAAAGAGCATCCGGGACGACAGGAGGTaGACCAGCATCAGGGGTACA | + |
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Preference number: 4 (lower is better) Translates to: SGRVGGGQGGTSKAPKSIRDDRR*TSIRGT Trigger: TGTACCCCTGATGCTGGTCCACCTCCTGTCGTCCCG...GATGCTCTTTGGGGCCTTGGAGGTGCCTCCCTGACCTCCGCCCACCCGCCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | AGCGGGCGGGTGGGCGGAGGTCAGGGAGGCACCTCCAAGGCCCCAAAGAGCATCACTCGGTGGAGCCCGTaGAGAGGCTCAGACACATCT | + |
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Preference number: 4 (lower is better) Translates to: SGRVGGGQGGTSKAPKSITRWSP*RGSDTS Trigger: AGATGTGTCTGAGCCTCTCCACGGGCTCCACCGAGT...GATGCTCTTTGGGGCCTTGGAGGTGCCTCCCTGACCTCCGCCCACCCGCCCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | AGCGGGCGGGTGGGCGGAGGTCAGGGAGGCACCTCCAAGGCCCCAAAGAGCATCAAGTGTCTGATCACGTaGTGGCCGCAGAAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SGRVGGGQGGTSKAPKSIKCLIT*WPQKGS Trigger: GCTGCCCTTCTGCGGCCACCACGTGATCAGACACTT...GATGCTCTTTGGGGCCTTGGAGGTGCCTCCCTGACCTCCGCCCACCCGCCCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGTACAGGCCCATCTGCTaGCCCAAGCTTTCCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ERSLKGQEVHLHMRCVLQYRPIC*PKLSWP Trigger: CGGCCAGGAAAGCTTGGGGCAGCAGATGGGCCTGTA...CTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | GAGGTCAGGGAGGCACCTCCAAGGCCCCAAAGAGCATCTGCTTCATCCCGAGAGTGCTCACCGCCACGATaGCTGTGTTCCCCAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: EVREAPPRPQRASASSRECSPPR*LCSPAE Trigger: CTCTGCTGGGGAACACAGCCATCGTGGCGGTGAGCA...CTCTCGGGATGAAGCAGATGCTCTTTGGGGCCTTGGAGGTGCCTCCCTGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGAGCTGTCTGATCACGTGGTaGCCGCAGAAGGGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RSLKGQEVHLHMRCVLQSCLITW*PQKGSL Trigger: GAGGCTGCCCTTCTGCGGCCACCACGTGATCAGACA...GCTCTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | ACCAAGAACACAGGAGAGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGACAGCAGGCACTCGGTaGAGCCCGTGGAGAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TKNTGEEPEGAGSPSAHATAGTR*SPWRGS Trigger: TGAGCCTCTCCACGGGCTCCACCGAGTGCCTGCTGT...CGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCTCTCCTGTGTTCTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGAGCAAGTGTCTGATCACGTaGTGGCCGCAGAAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RSLKGQEVHLHMRCVLQSKCLIT*WPQKGS Trigger: GCTGCCCTTCTGCGGCCACCACGTGATCAGACACTT...GCTCTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGAGCGCACCCTCAGGATGGTaGCCAGGATCAGCATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RSLKGQEVHLHMRCVLQSAPSGW*PGSACR Trigger: CCTACATGCTGATCCTGGCCACCATCCTGAGGGTGC...GCTCTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGAGCTGTAAAGACCTGGTCTaGGATCCGGGCTTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLKGQEVHLHMRCVLQSCKDLV*DPGFLA Trigger: AGCAAGGAAGCCCGGATCTCAGACCAGGTCTTTACA...GCTCTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | GAGTTGGACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCTGCTTTCTTTGCTGCGCCCGGTaGCTGAGGGCACCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELDQAGCWDRVGCDAFCFLCCAR*LRAPSG Trigger: TCCTGAGGGTGCCCTCAGCCACCGGGCGCAGCAAAG...AAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTCCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGAGGACTGTAAAGACCTaGTCTGAGATCCGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERSLKGQEVHLHMRCVLQRTVKT*SEIRAS Trigger: GGAAGCCCGGATCTCAGACCAGGTCTTTACAGTCCT...CTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR TCA 90 bp | GAGGTCAGGGAGGCACCTCCAAGGCCCCAAAGAGCATCTGCTTCATCCCGAGAGGAGTCACCAGGTACATaGCTGAGCACAGAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVREAPPRPQRASASSREESPGT*LSTEER Trigger: TCTTTCCTCTGTGCTCAGTCATGTACCTGGTGACTC...CTCTCGGGATGAAGCAGATGCTCTTTGGGGCCTTGGAGGTGCCTCCCTGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR TCA 90 bp | CGCTGTGTGCTGCAGAGCTGCTTCGTGGGGAGAACACAAAATTTGAGGATGGGCTCTCTGCCACTGACTTaGAGAGGCAGAGCACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCVLQSCFVGRTQNLRMGSLPLT*RGRAPR Trigger: CCTGGGTGCTCTGCCTCTTCAAGTCAGTGGCAGAGA...GCCCATCCTCAAATTTTGTGTTCTCCCCACGAAGCAGCTCTGCAGCACACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATGCGCTGTGTGCTGCAGAGCGACAAACTCAGAGACTaGAGTTCTGTTGCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLKGQEVHLHMRCVLQSDKLRD*SSVAGL Trigger: GAGCCCAGCAACAGAACTGCAGTCTCTGAGTTTGTC...GCTCTGCAGCACACAGCGCATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | GACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCTGCTTTTGGTATCTTTGCTGCGCCCGGTaGCTGAGGGCACCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DQAGCWDRVGCDAFCFWYLCCAR*LRAPSG Trigger: TCCTGAGGGTGCCCTCAGCCACCGGGCGCAGCAAAG...ATACCAAAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR TCA 90 bp | GAAACCAAGAACACAGGAGAGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATTCTCTGCCACTGACTTaGAGAGGCAGAGCACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETKNTGEEPEGAGSPSAHSLPLT*RGRAPR Trigger: CCTGGGTGCTCTGCCTCTTCAAGTCAGTGGCAGAGA...ATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCTCTCCTGTGTTCTTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | GAAACCAAGAACACAGGAGAGGAGCCTGAAGGGGCAGGAAGTCCATCTGCACATATCAGGCAGAGCCTGTaGCTCATGAGCACGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETKNTGEEPEGAGSPSAHIRQSL*LMSTGY Trigger: GTACCCCGTGCTCATGAGCCACAGGCTCTGCCTGAT...ATGTGCAGATGGACTTCCTGCCCCTTCAGGCTCCTCTCCTGTGTTCTTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | TGTGCTGCAGAGCTGCTTCGTGGGGAGAACACAAAATTTGAGGATGGGCAGTGTTGTCTGATCACGTGGTaGCCGCAGAAGGGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CAAELLRGENTKFEDGQCCLITW*PQKGSL Trigger: GAGGCTGCCCTTCTGCGGCCACCACGTGATCAGACA...ACACTGCCCATCCTCAAATTTTGTGTTCTCCCCACGAAGCAGCTCTGCAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR GCA 90 bp | GACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCTGCTTTTGGTATTACAGGCCCATCTGCTaGCCCAAGCTTTCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DQAGCWDRVGCDAFCFWYYRPIC*PKLSWP Trigger: CGGCCAGGAAAGCTTGGGGCAGCAGATGGGCCTGTA...ATACCAAAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | TGGTATTGGCATAGGCTGATCCACATAACAAGGGAAGACCCCTACCCATGCAGATGCTCACCGCCACGATaGCTGTGTTCCCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WYWHRLIHITREDPYPCRCSPPR*LCSPAE Trigger: CTCTGCTGGGGAACACAGCCATCGTGGCGGTGAGCA...TCTGCATGGGTAGGGGTCTTCCCTTGTTATGTGGATCAGCCTATGCCAATACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | GACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCTGCTTTTGGTATCGGGACGACAGGAGGTaGACCAGCATCAGGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DQAGCWDRVGCDAFCFWYRDDRR*TSIRGT Trigger: TGTACCCCTGATGCTGGTCCACCTCCTGTCGTCCCG...ATACCAAAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | TCACAGGCTGACTTCAAATTGACCATCCTCCTGCCTCAGTTTCACAAATGCTGGACAGCAGGCACTCGGTaGAGCCCGTGGAGAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQADFKLTILLPQFHKCWTAGTR*SPWRGS Trigger: TGAGCCTCTCCACGGGCTCCACCGAGTGCCTGCTGT...CCAGCATTTGTGAAACTGAGGCAGGAGGATGGTCAATTTGAAGTCAGCCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | TGTGCTGCAGAGCTGCTTCGTGGGGAGAACACAAAATTTGAGGATGGGCAGTGTATCAGGCAGAGCCTGTaGCTCATGAGCACGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CAAELLRGENTKFEDGQCIRQSL*LMSTGY Trigger: GTACCCCGTGCTCATGAGCCACAGGCTCTGCCTGAT...ACACTGCCCATCCTCAAATTTTGTGTTCTCCCCACGAAGCAGCTCTGCAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR GCA 90 bp | TTCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGAACCTACAGGCCCATCTaGTGCCCCAAGCTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTYALHKQVQGLELDQAGTYRPI*CPKLSW Trigger: CCAGGAAAGCTTGGGGCAGCAGATGGGCCTGTAGGT...TCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | TTCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGAACTCGGTGGAGCCCGTaGAGAGGCTCAGACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FTYALHKQVQGLELDQAGTRWSP*RGSDTS Trigger: AGATGTGTCTGAGCCTCTCCACGGGCTCCACCGAGT...TCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | TTCACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTTGGACCAGGCTGGAAGGCTCAGACACATCTaGACGGCACAGCCCGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTYALHKQVQGLELDQAGRLRHI*TAQPVK Trigger: CTTTACGGGCTGTGCCGTCCAGATGTGTCTGAGCCT...TCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | GTAGGTGTGAGCAGCTGCACTAGCCAAATACTAACTTGTCTTGAGGTCAGCCCACACGGGGTACCTGAGTaGCTGGCAAATGGCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGVSSCTSQILTCLEVSPHGVPE*LANGQV Trigger: TACTTGGCCATTTGCCAGCCACTCAGGTACCCCGTG...TGGGCTGACCTCAAGACAAGTTAGTATTTGGCTAGTGCAGCTGCTCACACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CAA 72 bp | ACCTATGCACTTCATAAACAAGTCCAGGGCTTGGAGTaGGACCAGGCTGGATGTTGGGACAGAGTAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TYALHKQVQGLE*DQAGCWDRVGC Trigger: ACAGCCTACTCTGTCCCAACATCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR TCA 90 bp | CCAAAGAGCATCTGCTTCATCCCGAGAGCAGTGAGGAGCTACTTACAGATGTCAGAGTCACCAGGTACATaGCTGAGCACAGAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKSICFIPRAVRSYLQMSESPGT*LSTEER Trigger: TCTTTCCTCTGTGCTCAGTCATGTACCTGGTGACTC...TGACATCTGTAAGTAGCTCCTCACTGCTCTCGGGATGAAGCAGATGCTCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR GCA 90 bp | GTAGGTGTGAGCAGCTGCACTAGCCAAATACTAACTTGTCTTGAGGTCAGCCCAGACAAACTCAGAGACTaGAGTTCTGTTGCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGVSSCTSQILTCLEVSPDKLRD*SSVAGL Trigger: GAGCCCAGCAACAGAACTGCAGTCTCTGAGTTTGTC...TGGGCTGACCTCAAGACAAGTTAGTATTTGGCTAGTGCAGCTGCTCACACCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CAA 72 bp | ATGTTCACCTATGCACTTCATAAACAAGTCCAGGGCTaGGAGTTGGACCAGGCTGGATGTTGGGACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MFTYALHKQVQG*ELDQAGCWDRV Trigger: TACTCTGTCCCAACATCCAGCCTGGTCCAACTCCAAGCCCTGGACTTGTTTATGAAGTGCATAGGTGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGAAAGAGCAATCAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*NSGPLKEQSVF Trigger: GAACACTGATTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | ATGCTTTCTGCTTTTGGTATAGGATTGGAAACCAAGAACACAGGAGAGGAGCCTAGGACTGTAAAGACCTaGTCTGAGATCCGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLSAFGIGLETKNTGEEPRTVKT*SEIRAS Trigger: GGAAGCCCGGATCTCAGACCAGGTCTTTACAGTCCT...AGGCTCCTCTCCTGTGTTCTTGGTTTCCAATCCTATACCAAAAGCAGAAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | CCAGTGACTATTAACTATTTATTTTCAGACTGGGTCTTACTATCACAGGCTGACGCACCCTCAGGATGGTaGCCAGGATCAGCATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTINYLFSDWVLLSQADAPSGW*PGSACR Trigger: CCTACATGCTGATCCTGGCCACCATCCTGAGGGTGC...GTCAGCCTGTGATAGTAAGACCCAGTCTGAAAATAAATAGTTAATAGTCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| 3UTR CAA 72 bp | TCAGACTGGGTCTTACTATCACAGGCTGACTTCAAATaGACCATCCTCCTGCCTCAGTTTCACAAATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDWVLLSQADFK*TILLPQFHKCW Trigger: CCAGCATTTGTGAAACTGAGGCAGGAGGATGGTCAATTTGAAGTCAGCCTGTGATAGTAAGACCCAGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CCA 90 bp | TATTTATTTTCAGACTGGGTCTTACTATCACAGGCTGACTTCAAATTGACCATCCACGGGGTACCTGAGTaGCTGGCAAATGGCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLFSDWVLLSQADFKLTIHGVPE*LANGQV Trigger: TACTTGGCCATTTGCCAGCCACTCAGGTACCCCGTG...GATGGTCAATTTGAAGTCAGCCTGTGATAGTAAGACCCAGTCTGAAAATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CAA 90 bp | TGTGCTGCAGAGCTGCTTCGTGGGGAGAACACAAAATTTGAGGATGGGCAGTGTGTCTCTGCCACTGACTaGAAGAGGCAGAGCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CAAELLRGENTKFEDGQCVSATD*KRQSTQ Trigger: CTGGGTGCTCTGCCTCTTCAAGTCAGTGGCAGAGAC...ACACTGCCCATCCTCAAATTTTGTGTTCTCCCCACGAAGCAGCTCTGCAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS-3UTR CAA 90 bp | GACCAGGCTGGATGTTGGGACAGAGTAGGCTGTGATGCTTTCTGCTTTTGGTATGTCTCTGCCACTGACTaGAAGAGGCAGAGCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DQAGCWDRVGCDAFCFWYVSATD*KRQSTQ Trigger: CTGGGTGCTCTGCCTCTTCAAGTCAGTGGCAGAGAC...ATACCAAAAGCAGAAAGCATCACAGCCTACTCTGTCCCAACATCCAGCCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS CAA 72 bp | GGCAGCCTCATGGCGATGACCGTCTCTGCCACTGACTaGAAGAGGCAGAGCACCCAGGAGGCTCCTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSLMAMTVSATD*KRQSTQEAPAS Trigger: GCTGGCAGGAGCCTCCTGGGTGCTCTGCCTCTTCAAGTCAGTGGCAGAGACGGTCATCGCCATGAGGCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055401.2 ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS CAA 90 bp | CCGCAGAAGGGCAGCCTCATGGCGATGACCGTCTCTGCCACTGACTaGAAGAGGCAGAGCACCCAGGAGGCTCCTGCCAGCATCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQKGSLMAMTVSATD*KRQSTQEAPASIRQ Trigger: CTGCCTGATGCTGGCAGGAGCCTCCTGGGTGCTCTGCCTCTTCAAGTCAGTGGCAGAGACGGTCATCGCCATGAGGCTGCCCTTCTGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055401.2 ENSMUST00000107862.3 ENSMUST00000217544.2 |
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| CDS TCA 72 bp | GGTCACCACAGCGTAGAGGACTGTAAAGACCTGGTCTaGGATCCGGGCTTCCTTGCTCTTGGGTTTCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: GHHSVEDCKDLV*DPGFLALGFHV Trigger: TACATGAAACCCAAGAGCAAGGAAGCCCGGATCTCAGACCAGGTCTTTACAGTCCTCTACGCTGTGGTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055401.2 ENSMUST00000107862.3 ENSMUST00000217544.2 |
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