Pregenerated sensors for OLFR706 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109354Ensembl transcript IDs: ENSMUST00000209025.2, ENSMUST00000213918.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATACATTTGTACAATATATTGGATCATATTCCTCCACCACTACTTaGCTCCAACTCCCCCTCCCAAACCCCTCACAACTGCATATCCTC | + |
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Preference number: 1 (lower is better) Translates to: YTFVQYIGSYSSTTT*LQLPLPNPSQLHIL Trigger: GAGGATATGCAGTTGTGAGGGGTTTGGGAGGGGGAGTTGGAGTCAAGTAGTGGTGGAGGAATATGATCCAATATATTGTACAAATGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATCATATTCCTCCACCACTACTTGACTCCAACTCCCCCTCCCAAACCCCTCACACAGACAACATTCTaGGTTTCACTCCCAGCACTA | + |
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Preference number: 2 (lower is better) Translates to: WIIFLHHYLTPTPPPKPLTQTTF*VSLPAL Trigger: TAGTGCTGGGAGTGAAACCCAGAATGTTGTCTGTGT...GAGGGGTTTGGGAGGGGGAGTTGGAGTCAAGTAGTGGTGGAGGAATATGATCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATGAGTATGAGCTCCCAAGCCCTGAGTAGATGTTTAGTGATTAAAAGCATAACACAGATCAAAGTGTaGTTAGGGGCTACTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LMSMSSQALSRCLVIKSITQIKV*LGATGD Trigger: GTCCCCAGTAGCCCCTAAGCACACTTTGATCTGTGT...TATGCTTTTAATCACTAAACATCTACTCAGGGCTTGGGAGCTCATACTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR CAA 90 bp | AACACAGATCAAAGTGTGCTTAGGGGCTACTGGGGACTTCCCATTTaGTCTCACTATTACATGAGGTTGAAATGGAAAGTGAATCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: NTDQSVLRGYWGLPI*SHYYMRLKWKVNPK Trigger: TTTGGGATTCACTTTCCATTTCAACCTCATGTAATAGTGAGACAAAATGGGAAGTCCCCAGTAGCCCCTAAGCACACTTTGATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR CAA 90 bp | TTATACATTTGTACAATATATTGGATCATATTCCTCCACCACTACTaGACTCCAACTCCCCCTCCCAAACCCCTCACAACTGCATATCCT | + |
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Preference number: 2 (lower is better) Translates to: LYICTIYWIIFLHHY*TPTPPPKPLTTAYP Trigger: AGGATATGCAGTTGTGAGGGGTTTGGGAGGGGGAGTTGGAGTCAAGTAGTGGTGGAGGAATATGATCCAATATATTGTACAAATGTATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR TCA 90 bp | TTACAGATGACAAGGAGGACAGATTCAAACTCAATTTCTGTAATACCTTACATCGAGGGTGAAGTTCAATaGCAGAGCAACACAGACAAC | + |
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Preference number: 2 (lower is better) Translates to: LQMTRRTDSNSISVIPYIEGEVQ*QSNTDN Trigger: GTTGTCTGTGTTGCTCTGTCATTGAACTTCACCCTC...GATGTAAGGTATTACAGAAATTGAGTTTGAATCTGTCCTCCTTGTCATCTGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCCAAACACAAGCTTCAAGTGTCAAATGCATCATCTTGTCCTGTTTTAAGTTTGTAACATCAGTGTaGGCATCTTTCAGATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: CFQTQASSVKCIILSCFKFVTSV*ASFRSG Trigger: GCCTGATCTGAAAGATGCTCACACTGATGTTACAAA...CTTAAAACAGGACAAGATGATGCATTTGACACTTGAAGCTTGTGTTTGGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAGATGACAAGGAGGACAGATTCAAACTCAATTTCTGTAATACCTTACATCCAAACTCATAATCTCTaGAACCCCTTCCATCAACAC | + |
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Preference number: 2 (lower is better) Translates to: LQMTRRTDSNSISVIPYIQTHNL*NPFHQH Trigger: GTGTTGATGGAAGGGGTTGCAGAGATTATGAGTTTG...GATGTAAGGTATTACAGAAATTGAGTTTGAATCTGTCCTCCTTGTCATCTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGCATCTTCTAGACCTCCTTTTCTTAAATAATTCTATGCCTGCTCACACGGAAAAGGCAGACAGATaGAAACTCATAATCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: IKHLLDLLFLNNSMPAHTEKADR*KLIISA Trigger: TGCAGAGATTATGAGTTTGCATCTGTCTGCCTTTTC...CGTGTGAGCAGGCATAGAATTATTTAAGAAAAGGAGGTCTAGAAGATGCTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAATTCAAGGCTCTTTTCAGTTGAGGTTTTTCAGCTGTGTATTCCAGTATTTACACATAAGAATTTCTaGGTGCTAAGCACTACTATC | + |
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Preference number: 2 (lower is better) Translates to: LNSRLFSVEVFQLCIPVFTHKNF*VLSTTI Trigger: GATAGTAGTGCTTAGCACTCAGAAATTCTTATGTGT...AAATACTGGAATACACAGCTGAAAAACCTCAACTGAAAAGAGCCTTGAATTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAATTCAAGGCTCTTTTCAGTTGAGGTTTTTCAGCTGTGTATTCCAGTATTTTCCAAATATTACAGATaGAAAGGCAGACAGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: LNSRLFSVEVFQLCIPVFSKYYR*KGRQMQ Trigger: TTGCATCTGTCTGCCTTTTCATCTGTAATATTTGGA...AAATACTGGAATACACAGCTGAAAAACCTCAACTGAAAAGAGCCTTGAATTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGCATCTTCTAGACCTCCTTTTCTTAAATAATTCTATGCCTGCTCACACGTACATGAGGTTGAAATaGAAAGTGAATCCCAAACTA | + |
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Preference number: 2 (lower is better) Translates to: IKHLLDLLFLNNSMPAHTYMRLK*KVNPKL Trigger: TAGTTTGGGATTCACTTTCCATTTCAACCTCATGTA...CGTGTGAGCAGGCATAGAATTATTTAAGAAAAGGAGGTCTAGAAGATGCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR CCA 72 bp | ATTAAGAACACAGATCAAAGTGTGCTTAGGGGCTACTaGGGACTTCCCATTTTGTCTCACTATTACATGAGG | + |
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Preference number: 3 (lower is better) Translates to: IKNTDQSVLRGY*GLPILSHYYMR Trigger: CCTCATGTAATAGTGAGACAAAATGGGAAGTCCCCAGTAGCCCCTAAGCACACTTTGATCTGTGTTCTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAACCCCAACTATCCAAGATCTTCCCCCAATTCTATATCCACCCACCTTCATCAAACTATGTCTACCTaGGTAATTCATCCAGATACT | + |
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Preference number: 3 (lower is better) Translates to: SNPNYPRSSPNSISTHLHQTMST*VIHPDT Trigger: AGTATCTGGATGAATTACCAAGGTAGACATAGTTTG...ATGAAGGTGGGTGGATATAGAATTGGGGGAAGATCTTGGATAGTTGGGGTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR CAA 90 bp | CTCATGAGTATGAGCTCCCAAGCCCTGAGTAGATGTTTAGTGATTAAAAGCATATGGGGACTTCCCATTTaGTCTCACTATTACATGAGG | + |
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Preference number: 3 (lower is better) Translates to: LMSMSSQALSRCLVIKSIWGLPI*SHYYMR Trigger: CCTCATGTAATAGTGAGACAAAATGGGAAGTCCCCA...TATGCTTTTAATCACTAAACATCTACTCAGGGCTTGGGAGCTCATACTCATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR CAA 90 bp | CTCATGAGTATGAGCTCCCAAGCCCTGAGTAGATGTTTAGTGATTAAAAGCATACACTATTACATGAGGTaGAAATGGAAAGTGAATCCC | + |
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Preference number: 3 (lower is better) Translates to: LMSMSSQALSRCLVIKSIHYYMR*KWKVNP Trigger: GGGATTCACTTTCCATTTCAACCTCATGTAATAGTG...TATGCTTTTAATCACTAAACATCTACTCAGGGCTTGGGAGCTCATACTCATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAATTCAAGGCTCTTTTCAGTTGAGGTTTTTCAGCTGTGTATTCCAGTATTTTACTCCATCATAATGTaGGGCAAGATTCACTGGATT | + |
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Preference number: 3 (lower is better) Translates to: LNSRLFSVEVFQLCIPVFYSIIM*GKIHWI Trigger: AATCCAGTGAATCTTGCCCAACATTATGATGGAGTA...AAATACTGGAATACACAGCTGAAAAACCTCAACTGAAAAGAGCCTTGAATTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR TCA 90 bp | TGGATCATATTCCTCCACCACTACTTGACTCCAACTCCCCCTCCCAAACCCCTCAATGCTAGAGCCATCTaGAGGGCACAGCCTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: WIIFLHHYLTPTPPPKPLNARAI*RAQPPK Trigger: CTTTGGAGGCTGTGCCCTTCAGATGGCTCTAGCATT...GAGGGGTTTGGGAGGGGGAGTTGGAGTCAAGTAGTGGTGGAGGAATATGATCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR TCA 90 bp | TGGATCATATTCCTCCACCACTACTTGACTCCAACTCCCCCTCCCAAACCCCTCCTGTCACATAAACCATaGGCTCATATTGGGAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: WIIFLHHYLTPTPPPKPLLSHKP*AHIGRY Trigger: ATACCTCCCAATATGAGCTCATGGTTTATGTGACAG...GAGGGGTTTGGGAGGGGGAGTTGGAGTCAAGTAGTGGTGGAGGAATATGATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CCA 90 bp | TCCAACCCCAACTATCCAAGATCTTCCCCCAATTCTATATCCACCCACCTTCATACCATGAGCTCATATTaGGAGGTATCTACACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SNPNYPRSSPNSISTHLHTMSSY*EVSTQD Trigger: GTCCTGTGTAGATACCTCCCAATATGAGCTCATGGT...ATGAAGGTGGGTGGATATAGAATTGGGGGAAGATCTTGGATAGTTGGGGTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR GCA 90 bp | TCCAACCCCAACTATCCAAGATCTTCCCCCAATTCTATATCCACCCACCTTCATTCTTGTTTTGCACTGTaGAATGAACTGGGTAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SNPNYPRSSPNSISTHLHSCFAL*NELGRT Trigger: TGTCCTACCCAGTTCATTGCACAGTGCAAAACAAGA...ATGAAGGTGGGTGGATATAGAATTGGGGGAAGATCTTGGATAGTTGGGGTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CCA 90 bp | CTCATGAGTATGAGCTCCCAAGCCCTGAGTAGATGTTTAGTGATTAAAAGCATACCAACCACCATCAAGTaGGAAAGACAGGTGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: LMSMSSQALSRCLVIKSIPTTIK*ERQVTR Trigger: CCTTGTCACCTGTCTTTCCCACTTGATGGTGGTTGG...TATGCTTTTAATCACTAAACATCTACTCAGGGCTTGGGAGCTCATACTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR GCA 90 bp | CTCATGAGTATGAGCTCCCAAGCCCTGAGTAGATGTTTAGTGATTAAAAGCATATTAAAGAGTAAGGTGTaGTGGCAGGATGTATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LMSMSSQALSRCLVIKSILKSKV*WQDVSA Trigger: GGCAGATACATCCTGCCAGCACACCTTACTCTTTAA...TATGCTTTTAATCACTAAACATCTACTCAGGGCTTGGGAGCTCATACTCATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR TCA 90 bp | CTATTACATGAGGTTGAAATGGAAAGTGAATCCCAAACTATGTCTACCTTGGTAGTAGCAGTCCATTGCTaGTCAGTGCCAACATGTACA | + |
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Preference number: 4 (lower is better) Translates to: LLHEVEMESESQTMSTLVVAVHC*SVPTCT Trigger: TGTACATGTTGGCACTGATCAGCAATGGACTGCTAC...TACCAAGGTAGACATAGTTTGGGATTCACTTTCCATTTCAACCTCATGTAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR TCA 90 bp | CTGAATTCAAGGCTCTTTTCAGTTGAGGTTTTTCAGCTGTGTATTCCAGTATTTAGTGGGAAAGACAGGTaGCAAGGGCTTTCTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LNSRLFSVEVFQLCIPVFSGKDR*QGLSFS Trigger: GGAAAAAGAAAGCCCTTGTCACCTGTCTTTCCCACT...AAATACTGGAATACACAGCTGAAAAACCTCAACTGAAAAGAGCCTTGAATTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR TCA 90 bp | TGTTTCCAAACACAAGCTTCAAGTGTCAAATGCATCATCTTGTCCTGTTTTAAGACATGTACAAGGCTGTaGCTATGGCACAGAGCAATT | + |
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Preference number: 4 (lower is better) Translates to: CFQTQASSVKCIILSCFKTCTRL*LWHRAI Trigger: AATTGCTCTGTGCCATAGTCACAGCCTTGTACATGT...CTTAAAACAGGACAAGATGATGCATTTGACACTTGAAGCTTGTGTTTGGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR TCA 90 bp | CTGAATTCAAGGCTCTTTTCAGTTGAGGTTTTTCAGCTGTGTATTCCAGTATTTCTTTTTCCCTTCATTTaGAGGCATGTGCAGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: LNSRLFSVEVFQLCIPVFLFPFI*RHVQHS Trigger: ACTGTGCTGCACATGCCTTCAAATGAAGGGAAAAAG...AAATACTGGAATACACAGCTGAAAAACCTCAACTGAAAAGAGCCTTGAATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR TCA 90 bp | ATAAAGCATCTTCTAGACCTCCTTTTCTTAAATAATTCTATGCCTGCTCACACGATTGTGTACACAGTATaGCCTACTGCAGTAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: IKHLLDLLFLNNSMPAHTIVYTV*PTAVRD Trigger: ATCTCTTACTGCAGTAGGTCATACTGTGTACACAAT...CGTGTGAGCAGGCATAGAATTATTTAAGAAAAGGAGGTCTAGAAGATGCTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR GCA 90 bp | ATAAAGCATCTTCTAGACCTCCTTTTCTTAAATAATTCTATGCCTGCTCACACGTCATTTGAAGGCATGTaGAGCACAGTAGACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: IKHLLDLLFLNNSMPAHTSFEGM*STVDRI Trigger: AATTCTGTCTACTGTGCTGCACATGCCTTCAAATGA...CGTGTGAGCAGGCATAGAATTATTTAAGAAAAGGAGGTCTAGAAGATGCTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CCA 90 bp | TTACAGATGACAAGGAGGACAGATTCAAACTCAATTTCTGTAATACCTTACATCAGGTGTCTAATTTCCTaGGACATACAGAAAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LQMTRRTDSNSISVIPYIRCLIS*DIQKGK Trigger: CTTCCCTTTCTGTATGTCCCAGGAAATTAGACACCT...GATGTAAGGTATTACAGAAATTGAGTTTGAATCTGTCCTCCTTGTCATCTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| 3UTR CAA 72 bp | GTTGAAATGGAAAGTGAATCCCAAACTATGTCTACCTaGGTAATTCATCCAGATACTTTCCAATCACAAAAT | + |
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Preference number: 4 (lower is better) Translates to: VEMESESQTMST*VIHPDTFQSQN Trigger: ATTTTGTGATTGGAAAGTATCTGGATGAATTACCAAGGTAGACATAGTTTGGGATTCACTTTCCATTTCAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CAA 90 bp | TGTTTCCAAACACAAGCTTCAAGTGTCAAATGCATCATCTTGTCCTGTTTTAAGAGGAGTAGCAGTCCATaGCTGATCAGTGCCAACATG | + |
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Preference number: 5 (lower is better) Translates to: CFQTQASSVKCIILSCFKRSSSP*LISANM Trigger: CATGTTGGCACTGATCAGCAATGGACTGCTACTCCT...CTTAAAACAGGACAAGATGATGCATTTGACACTTGAAGCTTGTGTTTGGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CAA 90 bp | TCCAACCCCAACTATCCAAGATCTTCCCCCAATTCTATATCCACCCACCTTCATCCAAAGGATATAGTGTaGTCTCTCAAAAGAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: SNPNYPRSSPNSISTHLHPKDIV*SLKRKS Trigger: GGATTTTCTTTTGAGAGACAACACTATATCCTTTGG...ATGAAGGTGGGTGGATATAGAATTGGGGGAAGATCTTGGATAGTTGGGGTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CAA 90 bp | CTCATGAGTATGAGCTCCCAAGCCCTGAGTAGATGTTTAGTGATTAAAAGCATATCTTTTTCCCTTCATTaGAAGGCATGTGCAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: LMSMSSQALSRCLVIKSISFSLH*KACAAQ Trigger: CTGTGCTGCACATGCCTTCAAATGAAGGGAAAAAGA...TATGCTTTTAATCACTAAACATCTACTCAGGGCTTGGGAGCTCATACTCATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CAA 90 bp | TCCAACCCCAACTATCCAAGATCTTCCCCCAATTCTATATCCACCCACCTTCATTTATATTGTCTTGTTTaGCACTGTGCAATGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: SNPNYPRSSPNSISTHLHLYCLV*HCAMNW Trigger: CCAGTTCATTGCACAGTGCAAAACAAGACAATATAA...ATGAAGGTGGGTGGATATAGAATTGGGGGAAGATCTTGGATAGTTGGGGTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CAA 90 bp | TCCAACCCCAACTATCCAAGATCTTCCCCCAATTCTATATCCACCCACCTTCATAACACAGAGATTATATaGTCTTGTTTTGCACTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SNPNYPRSSPNSISTHLHNTEII*SCFALC Trigger: GCACAGTGCAAAACAAGACAATATAATCTCTGTGTT...ATGAAGGTGGGTGGATATAGAATTGGGGGAAGATCTTGGATAGTTGGGGTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CAA 90 bp | CTGAATTCAAGGCTCTTTTCAGTTGAGGTTTTTCAGCTGTGTATTCCAGTATTTAACCATGAGCTCATATaGGGAGGTATCTACACAGGA | + |
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Preference number: 5 (lower is better) Translates to: LNSRLFSVEVFQLCIPVFNHELI*GGIYTG Trigger: TCCTGTGTAGATACCTCCCAATATGAGCTCATGGTT...AAATACTGGAATACACAGCTGAAAAACCTCAACTGAAAAGAGCCTTGAATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS-3UTR CAA 90 bp | TTACAGATGACAAGGAGGACAGATTCAAACTCAATTTCTGTAATACCTTACATCAGAAAGGGAAGTGCATaGTGTACACAGTATGACCTA | + |
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Preference number: 5 (lower is better) Translates to: LQMTRRTDSNSISVIPYIRKGSA*CTQYDL Trigger: TAGGTCATACTGTGTACACAATGCACTTCCCTTTCT...GATGTAAGGTATTACAGAAATTGAGTTTGAATCTGTCCTCCTTGTCATCTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213918.2 |
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| CDS CAA 72 bp | CGGGCATCCACTGTGATGACAAGGAGTAGCAGTCCATaGCTGATCAGTGCCAACATGTACAAGGCTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: RASTVMTRSSSP*LISANMYKAVT Trigger: AGTCACAGCCTTGTACATGTTGGCACTGATCAGCAATGGACTGCTACTCCTTGTCATCACAGTGGATGCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209025.2 ENSMUST00000213918.2 |
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| CDS TCA 72 bp | GGAGTAAGAGGAATGTCACCCCTGTCACATAAACCATaGGCTCATATTGGGAGGTATCTACACAGGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: GVRGMSPLSHKP*AHIGRYLHRTA Trigger: AGCTGTCCTGTGTAGATACCTCCCAATATGAGCTCATGGTTTATGTGACAGGGGTGACATTCCTCTTACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209025.2 ENSMUST00000213918.2 |
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| CDS TCA 72 bp | AGTATGACCTACTGCAGTAAGAGATGCCAGGATCCATaGTGTAGACACTATCAGCCAGCATACTGTAGGACT | + |
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Preference number: 6 (lower is better) Translates to: SMTYCSKRCQDP*CRHYQPAYCRT Trigger: AGTCCTACAGTATGCTGGCTGATAGTGTCTACATCATGGATCCTGGCATCTCTTACTGCAGTAGGTCATACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209025.2 ENSMUST00000213918.2 |
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