Pregenerated sensors for OLFR702 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056863Ensembl transcript IDs: ENSMUST00000080899.3, ENSMUST00000219803.2
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGGAGCCTTCCCTCCCTTaGCTGCATCCGGATCACAGT | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVEREPSLP*LHPDHS Trigger: ACTGTGATCCGGATGCAGTCAAGGGAGGGAAGGCTC...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR TCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGGTGGGACCCACAGGTTaGAAAGACCTTGAGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERVGPTG*KDLEPS Trigger: GGAAGGCTCAAGGTCTTTTCAACCTGTGGGTCCCAC...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR GCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGGCAGAGCACACTCTGTaGACCCTGCTAGGAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERAEHTL*TLLGER Trigger: TCTTTCTCCTAGCAGGGTGCACAGAGTGTGCTCTGC...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR CCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGACCACAACAGTGAGGTaGGACCCACAGGTTGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERTTTVR*DPQVEK Trigger: CTTTTCAACCTGTGGGTCCCACCTCACTGTTGTGGT...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR TCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGAAATGCACTGTCCACTaGACATGCAAATGCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERKCTVH*TCKCPT Trigger: AGTGGGGCATTTGCATGTTCAGTGGACAGTGCATTT...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR TCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGGGATCACAGTGGAGATaGTGTTCCCATAGGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERGSQWR*CSHRRQ Trigger: TTGTCTCCTATGGGAACATCATCTCCACTGTGATCC...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR CCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGAAGTGGACCAGCATCTaGGGTACAATGCTTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERKWTSI*GTMLVE Trigger: CTCTACAAGCATTGTACCCCAGATGCTGGTCCACTT...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR TCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGCATAGGAGACAAGGATaGGTGAGACAGGAGCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERHRRQG*VRQELI Trigger: TATTAGCTCCTGTCTCACTCATCCTTGTCTCCTATG...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR CCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGTTTCACTCATTGTCTTaGAGTTGGGTCTCATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERFHSLS*SWVSCR Trigger: CCTACATGAGACCCAACTCCAAGACAATGAGTGAAA...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR CCA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGTCATTGTCTTGGAGTTaGGTCTCATGTAGGCAAATA | + |
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Preference number: 4 (lower is better) Translates to: GTRERMNKGARTILLVERSLSWS*VSCRQI Trigger: TATTTGCCTACATGAGACCCAACTCCAAGACAATGA...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS TCA 90 bp | ATTCTGTCCCTGATAAGGGATACACAGTGTAAATGCACTGTCCACTaGACATGCAAATGCCCCACTGATCCAGGAAACTATAGCCAACTG | + |
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Preference number: 5 (lower is better) Translates to: ILSLIRDTQCKCTVH*TCKCPTDPGNYSQL Trigger: CAGTTGGCTATAGTTTCCTGGATCAGTGGGGCATTTGCATGTTCAGTGGACAGTGCATTTACACTGTGTATCCCTTATCAGGGACAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS CCA 90 bp | AGAACACAGAGACAACCTTATCCTTTTCACTCATTGTCTTGGAGTTaGGTCTCATGTAGGCAAATATTCCAGACCCATAGTAGAGGACCA | + |
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Preference number: 5 (lower is better) Translates to: RTQRQPYPFHSLSWS*VSCRQIFQTHSRGP Trigger: TGGTCCTCTACTATGGGTCTGGAATATTTGCCTACATGAGACCCAACTCCAAGACAATGAGTGAAAAGGATAAGGTTGTCTCTGTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS CCA 90 bp | CTGAGTAGAACACAGAGACAACCTTATCCTTTTCACTCATTGTCTTaGAGTTGGGTCTCATGTAGGCAAATATTCCAGACCCATAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: LSRTQRQPYPFHSLS*SWVSCRQIFQTHSR Trigger: TCTACTATGGGTCTGGAATATTTGCCTACATGAGACCCAACTCCAAGACAATGAGTGAAAAGGATAAGGTTGTCTCTGTGTTCTACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR CAA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGCAGGTTGAAAAGACCTaGAGCCTTCCCTCCCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: GTRERMNKGARTILLVERQVEKT*SLPSLD Trigger: GTCAAGGGAGGGAAGGCTCAAGGTCTTTTCAACCTG...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR CAA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGAAATGGTTTTCCTTTTaGAAAGGAAGTGGACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GTRERMNKGARTILLVERKWFSF*KGSGPA Trigger: TGCTGGTCCACTTCCTTTCAAAAAGGAAAACCATTT...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS-3UTR CAA 90 bp | GGAACAAGGGAAAGAATGAATAAAGGTGCTAGAACTATATTGTTAGTTGAAAGGAAGTCGAGAGTCAATTaGGATGAGGATTATAATGAC | + |
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Preference number: 5 (lower is better) Translates to: GTRERMNKGARTILLVERKSRVN*DEDYND Trigger: GTCATTATAATCCTCATCCAAATTGACTCTCGACTT...CCTTTCAACTAACAATATAGTTCTAGCACCTTTATTCATTCTTTCCCTTGTTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS TCA 72 bp | CTGATAAGGGATACACAGTGTAAATGCACTGTCCACTaGACATGCAAATGCCCCACTGATCCAGGAAACTAT | + |
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Preference number: 6 (lower is better) Translates to: LIRDTQCKCTVH*TCKCPTDPGNY Trigger: ATAGTTTCCTGGATCAGTGGGGCATTTGCATGTTCAGTGGACAGTGCATTTACACTGTGTATCCCTTATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS CCA 72 bp | ACACAGAGACAACCTTATCCTTTTCACTCATTGTCTTaGAGTTGGGTCTCATGTAGGCAAATATTCCAGACC | + |
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Preference number: 6 (lower is better) Translates to: TQRQPYPFHSLS*SWVSCRQIFQT Trigger: GGTCTGGAATATTTGCCTACATGAGACCCAACTCCAAGACAATGAGTGAAAAGGATAAGGTTGTCTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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| CDS CCA 72 bp | AGACAACCTTATCCTTTTCACTCATTGTCTTGGAGTTaGGTCTCATGTAGGCAAATATTCCAGACCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: RQPYPFHSLSWS*VSCRQIFQTHS Trigger: ACTATGGGTCTGGAATATTTGCCTACATGAGACCCAACTCCAAGACAATGAGTGAAAAGGATAAGGTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080899.3 ENSMUST00000219803.2 |
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