RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR700 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094493

Ensembl transcript IDs: ENSMUST00000079936.2, ENSMUST00000214840.2

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAAAGTTCCAGGAACATTTaGAGGGCACAGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQSSRNI*RAQPPK
Trigger: CTTTGGGGGCTGTGCCCTTCAAATGTTCCTGGAACT...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR TCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAACCAGGGTCCATGATATaGACACTCCAAGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQPGSMI*TLQASR
Trigger: TCTGCTGGCTTGGAGTGTTCATATCATGGACCCTGG...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR TCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAACTTCCTGCCTTCATGTaGAGGCATGTGGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQLPAFM*RHVEHS
Trigger: ACTGTGCTCCACATGCCTTCACATGAAGGCAGGAAG...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR TCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAATGGGTAGAACATACATaGAAGAAGCACCCCCGTACC +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQWVEHT*KKHPRT
Trigger: GGTACGGGGGTGCTTCTTTCATGTATGTTCTACCCA...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR TCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAAGCATGTGGAGCACAGTaGGCAGGATTAGTGTATAAG +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQACGAQ*AGLVYK
Trigger: CTTATACACTAATCCTGCTCACTGTGCTCCACATGC...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR GCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAACAGAAGAAGGTCTTCTaGACCACCAAGTGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQQKKVF*TTKCQF
Trigger: GAACTGACACTTGGTGGTGCAGAAGACCTTCTTCTG...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR CCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAATCATGTGAAGGCATGTaGAGCACAGTGAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQSCEGM*STVSRI
Trigger: AATCCTGCTCACTGTGCTCCACATGCCTTCACATGA...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR TCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAAACATGTACAGGGCTGTaGATGTGGCACAGAGTATTT +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQTCTGL*MWHRVF
Trigger: AAATACTCTGTGCCACATTCACAGCCCTGTACATGT...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR TCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAACCATCACATAAACCATaGGCTCATATTTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQPSHKP*AHIWRC
Trigger: ACACCTCCAAATATGAGCTCATGGTTTATGTGATGG...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR CCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAAAGATATTGTCTTGTTTaGGGGTGTGAAAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQRYCLV*GCERNW
Trigger: CCAGTTCCTTTCACACCCCCAAACAAGACAATATCT...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR CCA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAAAAAAAGGGTATTGCATaGTGTAGATGGTATATCCTA +
Preference number: 4 (lower is better)
Translates to: RNHIISRKSEARRDLLEQKKGIA*CRWYIL
Trigger: TAGGATATACCATCTACACCATGCAATACCCTTTTT...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
34% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS TCA 90 bp GGTGTAGATGGTATATCCTACTGCACTCAGAGATGCCAGGGTCCATaGTATGAACACTCCAAGCCAGCAGATCCTAGGTTTCATGAAAGT +
Preference number: 5 (lower is better)
Translates to: GVDGISYCTQRCQGP*YEHSKPADPRFHES
Trigger: ACTTTCATGAAACCTAGGATCTGCTGGCTTGGAGTGTTCATATCATGGACCCTGGCATCTCTGAGTGCAGTAGGATATACCATCTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079936.2
ENSMUST00000214840.2
CDS-3UTR CAA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAACAGTTCCAGGAACATTaGAAGGGCACAGCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: RNHIISRKSEARRDLLEQQFQEH*KGTAPK
Trigger: TTTGGGGGCTGTGCCCTTCAAATGTTCCTGGAACTG...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR CAA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAAAGGAGCAGTATCCCATaGCTGATCATAGCCAACATG +
Preference number: 5 (lower is better)
Translates to: RNHIISRKSEARRDLLEQRSSIP*LIIANM
Trigger: CATGTTGGCTATGATCAGCAATGGGATACTGCTCCT...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR CAA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAACTGATCTTCCTAGACTaGCAAAAAGGGTATTGCATG +
Preference number: 5 (lower is better)
Translates to: RNHIISRKSEARRDLLEQLIFLD*QKGYCM
Trigger: CATGCAATACCCTTTTTGCAAGTCTAGGAAGATCAG...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR CAA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAAAGAGAAGATATTGTCTaGTTTGGGGGTGTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: RNHIISRKSEARRDLLEQREDIV*FGGVKG
Trigger: TCCTTTCACACCCCCAAACAAGACAATATCTTCTCT...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS-3UTR CAA 90 bp AGAAATCATATAATTTCAAGGAAAAGTGAGGCTAGAAGGGACCTACTAGAACAACCAAAGGAGATAGTGTaGTCTTTAAGCAGAAAATCT +
Preference number: 5 (lower is better)
Translates to: RNHIISRKSEARRDLLEQPKEIV*SLSRKS
Trigger: AGATTTTCTGCTTAAAGACAACACTATCTCCTTTGG...TTGTTCTAGTAGGTCCCTTCTAGCCTCACTTTTCCTTGAAATTATATGATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214840.2
CDS TCA 72 bp GGTATATCCTACTGCACTCAGAGATGCCAGGGTCCATaGTATGAACACTCCAAGCCAGCAGATCCTAGGTTT +
Preference number: 6 (lower is better)
Translates to: GISYCTQRCQGP*YEHSKPADPRF
Trigger: AAACCTAGGATCTGCTGGCTTGGAGTGTTCATATCATGGACCCTGGCATCTCTGAGTGCAGTAGGATATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079936.2
ENSMUST00000214840.2
CDS TCA 72 bp TCTTCCTGCCTTCATGTGAAGGCATGTGGAGCACAGTaGGCAGGATTAGTGTATAAGAGGAAAGGATGGCAG +
Preference number: 6 (lower is better)
Translates to: SSCLHVKACGAQ*AGLVYKRKGWQ
Trigger: CTGCCATCCTTTCCTCTTATACACTAATCCTGCTCACTGTGCTCCACATGCCTTCACATGAAGGCAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079936.2
ENSMUST00000214840.2
CDS GCA 72 bp TCTGCCATAGGCCATAAAGGCCAGAAGAAGGTCTTCTaGACCACCAAGTGTCAGTTCCAGGAACATTTGAAG +
Preference number: 6 (lower is better)
Translates to: SAIGHKGQKKVF*TTKCQFQEHLK
Trigger: CTTCAAATGTTCCTGGAACTGACACTTGGTGGTGCAGAAGACCTTCTTCTGGCCTTTATGGCCTATGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079936.2
ENSMUST00000214840.2
CDS CCA 72 bp CATGTACAGGGCTGTGAATGTGGCACAGAGTATTTCTaGAGAGCCACTGTCATCCAGGATTCCAACCAAGAT +
Preference number: 6 (lower is better)
Translates to: HVQGCECGTEYF*RATVIQDSNQD
Trigger: ATCTTGGTTGGAATCCTGGATGACAGTGGCTCTCCAGAAATACTCTGTGCCACATTCACAGCCCTGTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079936.2
ENSMUST00000214840.2
CDS TCA 72 bp GGAGAAGTAAGAAGATCACACCCATCACATAAACCATaGGCTCATATTTGGAGGTGTCTGCACAGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: GEVRRSHPSHKP*AHIWRCLHRPA
Trigger: AGCTGGCCTGTGCAGACACCTCCAAATATGAGCTCATGGTTTATGTGATGGGTGTGATCTTCTTACTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079936.2
ENSMUST00000214840.2