Pregenerated sensors for OLFR70 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050215Ensembl transcript IDs: ENSMUST00000055545.5
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGAACCTCTGCATTTGGCACTGGGCCGGAAGCTTTTCCAGGCCTaGTGGTCTGGCAGTCAAGCCACGGTTGTGAGGGAAGAATCCGAG | + |
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Preference number: 1 (lower is better) Translates to: LEPLHLALGRKLFQA*WSGSQATVVREESE Trigger: CTCGGATTCTTCCCTCACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCCAAATGCAGAGGTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CCA 90 bp | CAGCCTGAGCTTCCTCTCCCACTTCTGTTAGTTGTGGCCCTGGGTTaGTCACTGAGACCCAAGAGTGGCAGTGGCCGTGGCACTTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: QPELPLPLLLVVALG*SLRPKSGSGRGTSR Trigger: CCTAGAAGTGCCACGGCCACTGCCACTCTTGGGTCTCAGTGACCAACCCAGGGCCACAACTAACAGAAGTGGGAGAGGAAGCTCAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CCA 90 bp | GAACCTCTGCATTTGGCACTGGGCCGGAAGCTTTTCCAGGCCTGCTaGTCTGGCAGTCAAGCCACGGTTGTGAGGGAAGAATCCGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: EPLHLALGRKLFQAC*SGSQATVVREESEL Trigger: CAACTCGGATTCTTCCCTCACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCCAAATGCAGAGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR GCA 90 bp | GCTGCTCACAAGGTTGTGACTGAGTGCCCCTGCAGGGCTGGGTGTTaGTCACGTTGGCTTCCCAGATTCAGTGCATGTTTCTCATGGGCA | + |
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Preference number: 1 (lower is better) Translates to: AAHKVVTECPCRAGC*SRWLPRFSACFSWA Trigger: TGCCCATGAGAAACATGCACTGAATCTGGGAAGCCAACGTGAGCAACACCCAGCCCTGCAGGGGCACTCAGTCACAACCTTGTGAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CCA 90 bp | TCTGCATTTGGCACTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTaGCAGTCAAGCCACGGTTGTGAGGGAAGAATCCGAGTTGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SAFGTGPEAFPGLLV*QSSHGCEGRIRVEE Trigger: TTCTTCAACTCGGATTCTTCCCTCACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCCAAATGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR TCA 90 bp | GTCAGTGAGAGACAGACCTTAGTGGTTTTTAAGCCACTGAAAAATTaGAGTCATTACCACAATAGAACTTCGCCTCTGCTGACAGAGATA | + |
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Preference number: 1 (lower is better) Translates to: VSERQTLVVFKPLKN*SHYHNRTSPLLTEI Trigger: TATCTCTGTCAGCAGAGGCGAAGTTCTATTGTGGTAATGACTTCAATTTTTCAGTGGCTTAAAAACCACTAAGGTCTGTCTCTCACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCAGTCAAGCCACGGTTGTGGTGACTGAGTGCCCCTaGAGGGCTGGGTGTTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LGRKLFQACWSGSQATVVVTECP*RAGCCS Trigger: TGAGCAACACCCAGCCCTGCAGGGGCACTCAGTCAC...CACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCAGTCAAGCCACGGTTGTGTGCAGGGCTGGGTGTTaGTCACGTTGGCTTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LGRKLFQACWSGSQATVVCRAGC*SRWLPR Trigger: TCTGGGAAGCCAACGTGAGCAACACCCAGCCCTGCA...CACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR TCA 90 bp | AAAACCGTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAAGCACGTGGACAAGCCTaGGGACAGCTCAGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KTVSSSLPAKLHTWPAGEARGQA*GQLRGG Trigger: CCCACCCCTGAGCTGTCCTCAGGCTTGTCCACGTGC...TTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACACGGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR CCA 90 bp | TGCATTTGGCACTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCAGTCAAGGTTGTGGCCCTGGGTTaGTCACTGAGACCCAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: CIWHWAGSFSRPAGLAVKVVALG*SLRPKS Trigger: ACTCTTGGGTCTCAGTGACCAACCCAGGGCCACAAC...CTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCCAAATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR GCA 90 bp | TGCATTTGGCACTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCAGTCAAGACTTCACACGTGGCCTaGAGGAGAAGTGGGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: CIWHWAGSFSRPAGLAVKTSHVA*RRSGLL Trigger: CAAAAGCCCACTTCTCCTGCAGGCCACGTGTGAAGT...CTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCCAAATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAAGTGGGCCCAGAGGGAAACTCTTaGAAGCACACTTGTAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: VSSSLPAKLHTWPAGEVGPEGNS*KHTCSL Trigger: TAGGCTACAAGTGTGCTTCCAAGAGTTTCCCTCTGG...GCCCACTTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAAGTGGGCAGTGCATGTTTCTCATaGGCAACTCCTAACCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VSSSLPAKLHTWPAGEVGSACFS*ATPNQR Trigger: CCTCTGGTTAGGAGTTGCCCATGAGAAACATGCACT...GCCCACTTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR TCA 90 bp | AAAACCGTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAAAGAAATGTGCCAGCCTaGGCTTCCTCTCCCACTTCT | + |
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Preference number: 2 (lower is better) Translates to: KTVSSSLPAKLHTWPAGERNVPA*ASSPTS Trigger: AGAAGTGGGAGAGGAAGCTCAGGCTGGCACATTTCT...TTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACACGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR CCA 90 bp | AAAACCGTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAACTAGTTTGGCTGTCCTaGTACTGTCCTGCCATTGGC | + |
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Preference number: 2 (lower is better) Translates to: KTVSSSLPAKLHTWPAGELVWLS*YCPAIG Trigger: GCCAATGGCAGGACAGTACCAGGACAGCCAAACTAG...TTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACACGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCAGTCAAGCCACGGTTGTGCTCGCCAGCTTTTGTTaGTCATTAAGCTTTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGRKLFQACWSGSQATVVLASFC*SLSFSK Trigger: TTTTGAAAAGCTTAATGATCAACAAAAGCTGGCGAG...CACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGCAGTCAAGCCACGGTTGTGAGGGAAGAATCCGAGTTGAAGAAACAAAATTTCCCTGGCCATCCTaGTCGGCAGTGTTCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: VWQSSHGCEGRIRVEETKFPWPS*SAVFWM Trigger: CATCCAGAACACTGCCGATCAGGATGGCCAGGGAAA...TTTTGTTTCTTCAACTCGGATTCTTCCCTCACAACCGTGGCTTGACTGCCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTGAGCACACAGTAGGACAGCAGGCTAAGTGCACAGTCTTAAATAATTTCCGAAGCACCAGTCAGTaGGAGACAGACCTTAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: QAEHTVGQQAKCTVLNNFRSTSQ*ETDLSG Trigger: ACCACTAAGGTCTGTCTCTCACTGACTGGTGCTTCG...GAAATTATTTAAGACTGTGCACTTAGCCTGCTGTCCTACTGTGTGCTCAGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CCA 72 bp | GGCACTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTaGCAGTCAAGCCACGGTTGTGAGGGAAGAATCCGA | + |
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Preference number: 3 (lower is better) Translates to: GTGPEAFPGLLV*QSSHGCEGRIR Trigger: TCGGATTCTTCCCTCACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR GCA 72 bp | GGATTGGCTGCTCACAAGGTTGTGACTGAGTGCCCCTaGAGGGCTGGGTGTTGCTCACGTTGGCTTCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GLAAHKVVTECP*RAGCCSRWLPR Trigger: TCTGGGAAGCCAACGTGAGCAACACCCAGCCCTGCAGGGGCACTCAGTCACAACCTTGTGAGCAGCCAATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR GCA 72 bp | GTGGCCTGCAGGAGAAGTGGGCTTTTGAAACGTAGCTaGACGTGGACAAGCCTGAGGACAGCTCAGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VACRRSGLLKRS*TWTSLRTAQGW Trigger: CCACCCCTGAGCTGTCCTCAGGCTTGTCCACGTGCAGCTACGTTTCAAAAGCCCACTTCTCCTGCAGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CCA 72 bp | CTTCCTCTCCCACTTCTGTTAGTTGTGGCCCTGGGTTaGTCACTGAGACCCAAGAGTGGCAGTGGCCGTGGC | + |
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Preference number: 3 (lower is better) Translates to: LPLPLLLVVALG*SLRPKSGSGRG Trigger: GCCACGGCCACTGCCACTCTTGGGTCTCAGTGACCAACCCAGGGCCACAACTAACAGAAGTGGGAGAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR CAA 90 bp | GTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAAGTGGGCTGGGTGTTGCTCACGTaGGCTTCCCAGATTCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: VSSSLPAKLHTWPAGEVGWVLLT*ASQIQC Trigger: GCACTGAATCTGGGAAGCCAACGTGAGCAACACCCA...GCCCACTTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CCA 72 bp | CATTTGGCACTGGGCCGGAAGCTTTTCCAGGCCTGCTaGTCTGGCAGTCAAGCCACGGTTGTGAGGGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: HLALGRKLFQAC*SGSQATVVREE Trigger: TTCTTCCCTCACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCCAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR GCA 72 bp | ATTAGCCTTACACAATCATGGGAGCGGTTAGATCCCTaGACCCTGGAACCTCTGCATTTGGCACTGGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: ISLTQSWERLDP*TLEPLHLALGR Trigger: CCGGCCCAGTGCCAAATGCAGAGGTTCCAGGGTGCAGGGATCTAACCGCTCCCATGATTGTGTAAGGCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR CAA 90 bp | GTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAAGTGGGCCTGACTCGCCAGCTTTaGTTGATCATTAAGCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: VSSSLPAKLHTWPAGEVGLTRQL*LIIKLF Trigger: GAAAAGCTTAATGATCAACAAAAGCTGGCGAGTCAG...GCCCACTTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR-3UTR CAA 90 bp | GTTAGATCCCTGCACCCTGGAACCTCTGCATTTGGCACTGGGCCGGAAGCTTTTGGTACTGTCCTGCCATaGGCAATTAAGCTAAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: VRSLHPGTSAFGTGPEAFGTVLP*AIKLSL Trigger: CAAACTTAGCTTAATTGCCAATGGCAGGACAGTACC...AAAAGCTTCCGGCCCAGTGCCAAATGCAGAGGTTCCAGGGTGCAGGGATCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CCA 72 bp | TCACGTTGGCTTCCCAGATTCAGTGCATGTTTCTCATaGGCAACTCCTAACCAGAGGGAAACTCTTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: SRWLPRFSACFS*ATPNQRETLGS Trigger: GCTTCCAAGAGTTTCCCTCTGGTTAGGAGTTGCCCATGAGAAACATGCACTGAATCTGGGAAGCCAACGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR TCA 72 bp | AGACACATAAGATTAAAGCTATGTATTAACTTAGGTTaGAAAGCTGATTGCATGGGGAATCCAACACCTAGT | + |
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Preference number: 3 (lower is better) Translates to: RHIRLKLCINLG*KADCMGNPTPS Trigger: ACTAGGTGTTGGATTCCCCATGCAATCAGCTTTTCAACCTAAGTTAATACATAGCTTTAATCTTATGTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR GCA 90 bp | GTTAGATCCCTGCACCCTGGAACCTCTGCATTTGGCACTGGGCCGGAAGCTTTTGGCCTTGCTCCGGCCTaGAGCAGAGGGCACCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: VRSLHPGTSAFGTGPEAFGLAPA*SRGHPK Trigger: CTTAGGGTGCCCTCTGCTGCAGGCCGGAGCAAGGCC...AAAAGCTTCCGGCCCAGTGCCAAATGCAGAGGTTCCAGGGTGCAGGGATCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR CCA 90 bp | CTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCAGTCAAGCCACGGTTGTGATGGGGCTGTGCAGGTaGGTGTCCAACACAATCAGC | + |
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Preference number: 4 (lower is better) Translates to: LGRKLFQACWSGSQATVVMGLCR*VSNTIS Trigger: GCTGATTGTGTTGGACACCCACCTGCACAGCCCCAT...CACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CAA 72 bp | GCTTCCTCTCCCACTTCTGTTAGTTGTGGCCCTGGGTaGGTCACTGAGACCCAAGAGTGGCAGTGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: ASSPTSVSCGPG*VTETQEWQWPW Trigger: CCACGGCCACTGCCACTCTTGGGTCTCAGTGACCAACCCAGGGCCACAACTAACAGAAGTGGGAGAGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR TCA 90 bp | GAACCTCTGCATTTGGCACTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCCCCATAACAAGGCTGTaGCAGCAGCTTTCACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EPLHLALGRKLFQACWSGPITRL*QQLSPL Trigger: CAGAGGTGAAAGCTGCTGTCACAGCCTTGTTATGGG...GCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCCAAATGCAGAGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR CCA 90 bp | CTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCAGTCAAGCCACGGTTGTGTTGTCAGGACAGCTGTaGCCACCGTTAATATCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LGRKLFQACWSGSQATVVLSGQL*PPLISA Trigger: CGCTGATATTAACGGTGGCCACAGCTGTCCTGACAA...CACAACCGTGGCTTGACTGCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR TCA 90 bp | GTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAAGTGGGCTTAATATCAGCGCGTTaGGGGAAATGTCCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: VSSSLPAKLHTWPAGEVGLISAR*GKCPHR Trigger: CCTGTGGGGACATTTCCCTCAACGCGCTGATATTAA...GCCCACTTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR GCA 90 bp | AAAACCGTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAACCACAGAAGGGGAGATaGCAGACCAGGATGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: KTVSSSLPAKLHTWPAGEPQKGR*QTRMEC Trigger: GCATTCCATCCTGGTCTGGCATCTCCCCTTCTGTGG...TTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACACGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR CCA 90 bp | AGAGGCTGTGAGAGTCCTTGTAGGCCTGTTTTATGTCTCTTTTCCCTGGCCATCAGCTGGGGAAGGAGATaGTCCTTTGGACATCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RGCESPCRPVLCLFSLAISWGRR*SFGHPG Trigger: TCCTGGATGTCCAAAGGACCATCTCCTTCCCCAGCT...GATGGCCAGGGAAAAGAGACATAAAACAGGCCTACAAGGACTCTCACAGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| 3UTR CAA 72 bp | CAGAGGAACCCAAGTCTCGGGCTGACTCGCCAGCTTTaGTTGATCATTAAGCTTTTCAAAAATCTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QRNPSLGLTRQL*LIIKLFKNLQS Trigger: GGACTGGAGATTTTTGAAAAGCTTAATGATCAACAAAAGCTGGCGAGTCAGCCCGAGACTTGGGTTCCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS GCA 90 bp | GCGAGTTGGCAAAGCCAGTCCCCCAGCTTATTCCTGCCATCTGGATaGATAGCGGCCCATTCACGAGCTCCGGGTAGCGGAGGGGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: ASWQSQSPSLFLPSG*IAAHSRAPGSGGAD Trigger: GTCAGCCCCTCCGCTACCCGGAGCTCGTGAATGGGCCGCTATGCATCCAGATGGCAGGAATAAGCTGGGGGACTGGCTTTGCCAACTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR CAA 90 bp | GAACCTCTGCATTTGGCACTGGGCCGGAAGCTTTTCCAGGCCTGCTGGTCTGGCGTTAATATCAGCGCGTaGAGGGAAATGTCCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: EPLHLALGRKLFQACWSGVNISA*REMSPQ Trigger: CTGTGGGGACATTTCCCTCAACGCGCTGATATTAAC...GCCAGACCAGCAGGCCTGGAAAAGCTTCCGGCCCAGTGCCAAATGCAGAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CCA 90 bp | CACAGAAGGGGAGATGCCAGACCAGGATGGAATGCAGGAGCGAGTTaGCAAAGCCAGTCCCCCAGCTTATTCCTGCCATCTGGATGCATA | + |
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Preference number: 5 (lower is better) Translates to: HRRGDARPGWNAGAS*QSQSPSLFLPSGCI Trigger: TATGCATCCAGATGGCAGGAATAAGCTGGGGGACTGGCTTTGCCAACTCGCTCCTGCATTCCATCCTGGTCTGGCATCTCCCCTTCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS-3UTR CAA 90 bp | GTGTCCAGCTCTCTCCCAGCTAAACTTCACACGTGGCCTGCAGGAGAAGTGGGCTGGACATCCAGGAAGTaGAGAAGCATCATAGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: VSSSLPAKLHTWPAGEVGWTSRK*RSIIGV Trigger: CACACCTATGATGCTTCTCAACTTCCTGGATGTCCA...GCCCACTTCTCCTGCAGGCCACGTGTGAAGTTTAGCTGGGAGAGAGCTGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS GCA 72 bp | CAAAGCCAGTCCCCCAGCTTATTCCTGCCATCTGGATaGATAGCGGCCCATTCACGAGCTCCGGGTAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: QSQSPSLFLPSG*IAAHSRAPGSG Trigger: TCCGCTACCCGGAGCTCGTGAATGGGCCGCTATGCATCCAGATGGCAGGAATAAGCTGGGGGACTGGCTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CAA 72 bp | GGGAGATGCCAGACCAGGATGGAATGCAGGAGCGAGTaGGCAAAGCCAGTCCCCCAGCTTATTCCTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: GRCQTRMECRSE*AKPVPQLIPAI Trigger: GATGGCAGGAATAAGCTGGGGGACTGGCTTTGCCAACTCGCTCCTGCATTCCATCCTGGTCTGGCATCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CAA 90 bp | CCACAGAAGGGGAGATGCCAGACCAGGATGGAATGCAGGAGCGAGTaGGCAAAGCCAGTCCCCCAGCTTATTCCTGCCATCTGGATGCAT | + |
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Preference number: 6 (lower is better) Translates to: PQKGRCQTRMECRSE*AKPVPQLIPAIWMH Trigger: ATGCATCCAGATGGCAGGAATAAGCTGGGGGACTGGCTTTGCCAACTCGCTCCTGCATTCCATCCTGGTCTGGCATCTCCCCTTCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CCA 72 bp | GGAGATGCCAGACCAGGATGGAATGCAGGAGCGAGTTaGCAAAGCCAGTCCCCCAGCTTATTCCTGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: GDARPGWNAGAS*QSQSPSLFLPS Trigger: AGATGGCAGGAATAAGCTGGGGGACTGGCTTTGCCAACTCGCTCCTGCATTCCATCCTGGTCTGGCATCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CCA 72 bp | TGTAATGACCACAGAAGGGGAGATGCCAGACCAGGATaGAATGCAGGAGCGAGTTGGCAAAGCCAGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: CNDHRRGDARPG*NAGASWQSQSP Trigger: GGGGGACTGGCTTTGCCAACTCGCTCCTGCATTCCATCCTGGTCTGGCATCTCCCCTTCTGTGGTCATTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CAA 90 bp | GGGGTCATTGTCAGGACAGCTGTGGCCACCGTTAATATCAGCGCGTaGAGGGAAATGTCCCCACAGGCCAGTTTCAGCACTGCCAAGATC | + |
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Preference number: 6 (lower is better) Translates to: GVIVRTAVATVNISA*REMSPQASFSTAKI Trigger: GATCTTGGCAGTGCTGAAACTGGCCTGTGGGGACATTTCCCTCAACGCGCTGATATTAACGGTGGCCACAGCTGTCCTGACAATGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS TCA 72 bp | AGCACAAACAGAGCGATCTCGAGGCCGTGGTGGTCCTaGAGTCCCAGCAGGACATACTCTATCACCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: STNRAISRPWWS*SPSRTYSITSV Trigger: CACAGAGGTGATAGAGTATGTCCTGCTGGGACTTCAGGACCACCACGGCCTCGAGATCGCTCTGTTTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS TCA 72 bp | TCAGGACAGCTGTGGCCACCGTTAATATCAGCGCGTTaGGGGAAATGTCCCCACAGGCCAGTTTCAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: SGQLWPPLISAR*GKCPHRPVSAL Trigger: CAGTGCTGAAACTGGCCTGTGGGGACATTTCCCTCAACGCGCTGATATTAACGGTGGCCACAGCTGTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CAA 90 bp | AGGGCACAGCTGGGGAAGGAGATGGTCCTTTGGACATCCAGGAAGTaGAGAAGCATCATAGGTGTGAAGGAAGAGGTACCGCAGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: RAQLGKEMVLWTSRK*RSIIGVKEEVPQMS Trigger: AGACATCTGCGGTACCTCTTCCTTCACACCTATGATGCTTCTCAACTTCCTGGATGTCCAAAGGACCATCTCCTTCCCCAGCTGTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CAA 72 bp | CTGGGGAAGGAGATGGTCCTTTGGACATCCAGGAAGTaGAGAAGCATCATAGGTGTGAAGGAAGAGGTACCG | + |
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Preference number: 6 (lower is better) Translates to: LGKEMVLWTSRK*RSIIGVKEEVP Trigger: CGGTACCTCTTCCTTCACACCTATGATGCTTCTCAACTTCCTGGATGTCCAAAGGACCATCTCCTTCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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| CDS CAA 72 bp | ATAGAGCAACGTGATAATCTTACCCACGCTGGGGTCTaGGTCTTTGGGCTTGAGGTACATGAAGGTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: IEQRDNLTHAGV*VFGLEVHEGDG Trigger: ACCATCACCTTCATGTACCTCAAGCCCAAAGACCAAGACCCCAGCGTGGGTAAGATTATCACGTTGCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055545.5 |
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