Pregenerated sensors for OLFR699 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096714Ensembl transcript IDs: ENSMUST00000065024.2, ENSMUST00000215952.2, ENSMUST00000216307.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTTGCTTCTTCTTCTACAGATGCTTCAGGTTAGACATACAAAATaGAATACTCAAAGTCAGGATCAACACATGAGAGGACATGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: SLLLLLQMLQVRHTK*NTQSQDQHMRGHGA Trigger: TGCCCCATGTCCTCTCATGTGTTGATCCTGACTTTGAGTATTTCATTTTGTATGTCTAACCTGAAGCATCTGTAGAAGAAGAAGCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR GCA 90 bp | GTTCTGCTGCTAGCATTTCTTTTTAAAACTACTCCTACTATAATCTaGCCCATAAACTTTCCTTGCTTCTTCTTCTACAGATGCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VLLLAFLFKTTPTII*PINFPCFFFYRCFR Trigger: CCTGAAGCATCTGTAGAAGAAGAAGCAAGGAAAGTTTATGGGGCAGATTATAGTAGGAGTAGTTTTAAAAAGAAATGCTAGCAGCAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR CCA 90 bp | TACAAAATGAAATACTCAAAGTCAGGATCAACACATGAGAGGACATaGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTA | + |
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Preference number: 1 (lower is better) Translates to: YKMKYSKSGSTHERT*GTFISVYELSHSVL Trigger: TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTCATGTGTTGATCCTGACTTTGAGTATTTCATTTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGCATGATGCAGAGCTCTaGCAACTGGTCATCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: PSTREAEAGGFLSSRPAWHDAEL*QLVIRQ Trigger: TTGTCTGATGACCAGTTGGCAGAGCTCTGCATCATG...CCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCAGCCTGGTCTACAAAGTaGGTTCCAGGACAATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HPQYSHFFLHILYVLLLAAWSTK*VPGQSG Trigger: CCCTGATTGTCCTGGAACTCACTTTGTAGACCAGGC...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCAGCTATCCATAAAAGCTaGTGCTGCCAGGCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: HPQYSHFFLHILYVLLLAAIHKS*CCQAWW Trigger: CCACCATGCCTGGCAGCACCAGCTTTTATGGATAGC...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCAGAAGAAGAGAGAACATaGTGCAGAGCTCTGCCAACT | + |
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Preference number: 2 (lower is better) Translates to: HPQYSHFFLHILYVLLLAEEERT*CRALPT Trigger: AGTTGGCAGAGCTCTGCATCATGTTCTCTCTTCTTC...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTAGCCTGGTCTACAAAGTaGGTTCCAGGACAATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ERTWGTFISVYELSHSVLAWSTK*VPGQSG Trigger: CCCTGATTGTCCTGGAACTCACTTTGTAGACCAGGC...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTAATCCATAAAAGCTGGTaGTGCCAGGCATGGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: ERTWGTFISVYELSHSVLIHKSW*CQAWWC Trigger: GCACCACCATGCCTGGCAGCACCAGCTTTTATGGAT...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCACTGACTGCTCTTCCATaGGATCTAAAATGGGATGCA | + |
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Preference number: 2 (lower is better) Translates to: HPQYSHFFLHILYVLLLALTALP*DLKWDA Trigger: TGCATCCCATTTTAGATCTCATGGAAGAGCAGTCAG...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCAACACATGAGAGGACATaGGGCACCTTTATTTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: HPQYSHFFLHILYVLLLATHERT*GTFISV Trigger: CACTGAAATAAAGGTGCCCCATGTCCTCTCATGTGT...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTAGAAGAAGAGAGAACATaGTGCAGAGCTCTGCCAACT | + |
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Preference number: 2 (lower is better) Translates to: ERTWGTFISVYELSHSVLEEERT*CRALPT Trigger: AGTTGGCAGAGCTCTGCATCATGTTCTCTCTTCTTC...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACAGAGCTCTGCCAACTaGTCATCAGACAAACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ERTWGTFISVYELSHSVLQSSAN*SSDKLC Trigger: ACACAGTTTGTCTGATGACCAGTTGGCAGAGCTCTG...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCTTTTAGGCATGATGCAGAGCTCTaGCAACTGGTCATCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: WGTFISVYELSHSVLPFRHDAEL*QLVIRQ Trigger: TTGTCTGATGACCAGTTGGCAGAGCTCTGCATCATG...CCTAAAAGGTAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCAAGATCTAAAATGGGATaGAATGCCCTCTTCTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: HPQYSHFFLHILYVLLLARSKMG*NALFWY Trigger: ATACCAGAAGAGGGCATTGCATCCCATTTTAGATCT...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCATTCTTCTTCTACAGATaGTTCAGGTTAGACATACAA | + |
|
Preference number: 2 (lower is better) Translates to: HPQYSHFFLHILYVLLLAFFFYR*FRLDIQ Trigger: TTGTATGTCTAACCTGAAGCATCTGTAGAAGAAGAA...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACTCCATGCCACCATTTaGTGTTATCTATGTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: ERTWGTFISVYELSHSVLLHATI*CYLCFY Trigger: ATAAAAACATAGATAACAGCAAATGGTGGCATGGAG...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR CAA 90 bp | GAACATGATGCAGAGCTCTGCCAACTGGTCATCAGACAAACTGTGTaGATTTATATCTTACCAAGAGTAGTTGGTTTAAAATTTGTACAA | + |
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Preference number: 2 (lower is better) Translates to: EHDAELCQLVIRQTV*IYILPRVVGLKFVQ Trigger: TTGTACAAATTTTAAACCAACTACTCTTGGTAAGATATAAATCAACACAGTTTGTCTGATGACCAGTTGGCAGAGCTCTGCATCATGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR CCA 72 bp | AAATACTCAAAGTCAGGATCAACACATGAGAGGACATaGGGCACCTTTATTTCAGTGTATGAGTTATCTCAC | + |
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Preference number: 3 (lower is better) Translates to: KYSKSGSTHERT*GTFISVYELSH Trigger: GTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTCATGTGTTGATCCTGACTTTGAGTATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCTTTTAGGAAAAATCCTCTCCTATaGATCTCTAAGAAACCCTCT | + |
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Preference number: 3 (lower is better) Translates to: WGTFISVYELSHSVLPFRKNPLL*ISKKPS Trigger: AGAGGGTTTCTTAGAGATCAATAGGAGAGGATTTTT...CCTAAAAGGTAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR TCA 72 bp | TATTGTTATGCCATCCCTAGCTGTTATGAACAGAGCTaGATATGGACAAGCAAATGTCTCTACAATATGGTA | + |
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Preference number: 3 (lower is better) Translates to: YCYAIPSCYEQS*IWTSKCLYNMV Trigger: TACCATATTGTAGAGACATTTGCTTGTCCATATTCAGCTCTGTTCATAACAGCTAGGGATGGCATAACAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR TCA 72 bp | CTTCTTCTACAGATGCTTCAGGTTAGACATACAAAATaGAATACTCAAAGTCAGGATCAACACATGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: LLLQMLQVRHTK*NTQSQDQHMRG Trigger: TCCTCTCATGTGTTGATCCTGACTTTGAGTATTTCATTTTGTATGTCTAACCTGAAGCATCTGTAGAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| 3UTR GCA 72 bp | TGCCCCATAAACTTTCCTTGCTTCTTCTTCTACAGATaGTTCAGGTTAGACATACAAAATGAAATACTCAAA | + |
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Preference number: 3 (lower is better) Translates to: CPINFPCFFFYR*FRLDIQNEILK Trigger: TTTGAGTATTTCATTTTGTATGTCTAACCTGAAGCATCTGTAGAAGAAGAAGCAAGGAAAGTTTATGGGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTGTAGGAAGCTAGGATaGCAGCAAGTGGGGGAATTA | + |
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Preference number: 4 (lower is better) Translates to: PSTREAEAGGFLSSRPAWCRKLG*QQVGEL Trigger: TAATTCCCCCACTTGCTGCCATCCTAGCTTCCTACA...CCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR TCA 90 bp | CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGCTTCCTTCCTTCATTTaGAGGCTTGTTAAGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: PSTREAEAGGFLSSRPAWLPSFI*RLVKHC Trigger: ACAGTGCTTAACAAGCCTTCAAATGAAGGAAGGAAG...CCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGAGCCCTCTAATGATATaGTGTTGTCTTTTAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PSTREAEAGGFLSSRPAWSPLMI*CCLLAE Trigger: TTCTGCTAAAAGACAACACCATATCATTAGAGGGCT...CCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTTGCAGAAGGGATATTaGATTGTATGGATGGTATAT | + |
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Preference number: 4 (lower is better) Translates to: PSTREAEAGGFLSSRPAWLQKGY*IVWMVY Trigger: ATATACCATCCATACAATGCAATATCCCTTCTGCAA...CCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGTTCCAGGACAATCAGGGCTACAGAGAAACCCTGTCTCGAAAAACCAAACAGAAGGAGGTCTTCTaGACCACCAAGTGTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SEFQDNQGYRETLSRKTKQKEVF*TTKCQC Trigger: GCACTGACACTTGGTGGTGCAGAAGACCTCCTTCTG...TTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGATTGTCCTGGAACTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR GCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCACAGAAGGAGGTCTTCTaGACCACCAAGTGTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: HPQYSHFFLHILYVLLLAQKEVF*TTKCQC Trigger: GCACTGACACTTGGTGGTGCAGAAGACCTCCTTCTG...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGTTCCAGGACAATCAGGGCTACAGAGAAACCCTGTCTCGAAAAACCAAAACATGTACAGGGCTGTaGTTACAGCACAGAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SEFQDNQGYRETLSRKTKTCTGL*LQHRAD Trigger: ATCTGCTCTGTGCTGTAATCACAGCCCTGTACATGT...TTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGATTGTCCTGGAACTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR TCA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCAACATGTACAGGGCTGTaGTTACAGCACAGAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: HPQYSHFFLHILYVLLLATCTGL*LQHRAD Trigger: ATCTGCTCTGTGCTGTAATCACAGCCCTGTACATGT...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR TCA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTAAGTGCTAGGAACATCTaGAGGGCACAGCCCTCTAAT | + |
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Preference number: 4 (lower is better) Translates to: ERTWGTFISVYELSHSVLSARNI*RAQPSN Trigger: ATTAGAGGGCTGTGCCCTTCAGATGTTCCTAGCACT...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR TCA 90 bp | TGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCTTTTAGGAGTGCTAGGAACATCTaGAGGGCACAGCCCTCTAAT | + |
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Preference number: 4 (lower is better) Translates to: WGTFISVYELSHSVLPFRSARNI*RAQPSN Trigger: ATTAGAGGGCTGTGCCCTTCAGATGTTCCTAGCACT...CCTAAAAGGTAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGTTCCAGGACAATCAGGGCTACAGAGAAACCCTGTCTCGAAAAACCAAACCATCACATAAACCATaGGTTCATATTTGGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SEFQDNQGYRETLSRKTKPSHKP*VHIWRC Trigger: ACACCTCCAAATATGAACTCATGGTTTATGTGATGG...TTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGATTGTCCTGGAACTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTATGTAGGAAGCTAGGATaGCAGCAAGTGGGGGAATTA | + |
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Preference number: 4 (lower is better) Translates to: ERTWGTFISVYELSHSVLCRKLG*QQVGEL Trigger: TAATTCCCCCACTTGCTGCCATCCTAGCTTCCTACA...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGTTCCAGGACAATCAGGGCTACAGAGAAACCCTGTCTCGAAAAACCAAAAGCCCTCTAATGATATaGTGTTGTCTTTTAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SEFQDNQGYRETLSRKTKSPLMI*CCLLAE Trigger: TTCTGCTAAAAGACAACACCATATCATTAGAGGGCT...TTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGATTGTCCTGGAACTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGTTCCAGGACAATCAGGGCTACAGAGAAACCCTGTCTCGAAAAACCAAAAAGCCAGCAGATGCTTaGTCTCATGAAAATCATATA | + |
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Preference number: 4 (lower is better) Translates to: SEFQDNQGYRETLSRKTKKPADA*SHENHI Trigger: TATATGATTTTCATGAGACCAAGCATCTGCTGGCTT...TTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGATTGTCCTGGAACTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR TCA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCATCACATAAACCATaGGTTCATATTTGGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ERTWGTFISVYELSHSVLPSHKP*VHIWRC Trigger: ACACCTCCAAATATGAACTCATGGTTTATGTGATGG...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR TCA 90 bp | TGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCTTTTAGGAGATGCTTGGTCTCATaGAAATCATATAGTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: WGTFISVYELSHSVLPFRRCLVS*KSYSSE Trigger: CTCTGAACTATATGATTTTCATGAGACCAAGCATCT...CCTAAAAGGTAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCTTTTAGGAAGCCAGCAGATGCTTaGTCTCATGAAAATCATATA | + |
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Preference number: 4 (lower is better) Translates to: WGTFISVYELSHSVLPFRKPADA*SHENHI Trigger: TATATGATTTTCATGAGACCAAGCATCTGCTGGCTT...CCTAAAAGGTAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCTTTTAGGGGATATTGCATTGTATaGATGGTATATCCTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: WGTFISVYELSHSVLPFRGYCIV*MVYPRA Trigger: TGCTCTAGGATATACCATCCATACAATGCAATATCC...CCTAAAAGGTAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR GCA 90 bp | TGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCTTTTAGGTTGCAGAAGGGATATTaGATTGTATGGATGGTATAT | + |
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Preference number: 4 (lower is better) Translates to: WGTFISVYELSHSVLPFRLQKGY*IVWMVY Trigger: ATATACCATCCATACAATGCAATATCCCTTCTGCAA...CCTAAAAGGTAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS TCA 90 bp | AGAAGGAGGTCTTCTGCACCACCAAGTGTCAGTGCTAGGAACATCTaGAGGGCACAGCCCTCTAATGATATGGTGTTGTCTTTTAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RRRSSAPPSVSARNI*RAQPSNDMVLSFSR Trigger: TCTGCTAAAAGACAACACCATATCATTAGAGGGCTGTGCCCTTCAGATGTTCCTAGCACTGACACTTGGTGGTGCAGAAGACCTCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065024.2 ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS TCA 90 bp | CACAAGCCAGCTTCAGCAATGGAGGGATTTCACAATATAGATCTCTaGTTTTACGGGATTTGCAGAAGGGATATTGCATTGTATGGATGG | + |
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Preference number: 5 (lower is better) Translates to: HKPASAMEGFHNIDL*FYGICRRDIALYGW Trigger: CCATCCATACAATGCAATATCCCTTCTGCAAATCCCGTAAAATCAGAGATCTATATTGTGAAATCCCTCCATTGCTGAAGCTGGCTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065024.2 ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS CCA 90 bp | AGATCTCTGATTTTACGGGATTTGCAGAAGGGATATTGCATTGTATaGATGGTATATCCTAGAGCACTCAGAAGTCCCAGGATCCATGAT | + |
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Preference number: 5 (lower is better) Translates to: RSLILRDLQKGYCIV*MVYPRALRSPRIHD Trigger: ATCATGGATCCTGGGACTTCTGAGTGCTCTAGGATATACCATCCATACAATGCAATATCCCTTCTGCAAATCCCGTAAAATCAGAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065024.2 ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CAA 90 bp | TGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTACCTTTTAGGAGCAGAAGCAGCCCATaGCTGATCATAGCTAACATG | + |
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Preference number: 5 (lower is better) Translates to: WGTFISVYELSHSVLPFRSRSSP*LIIANM Trigger: CATGTTAGCTATGATCAGCAATGGGCTGCTTCTGCT...CCTAAAAGGTAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGTTCCAGGACAATCAGGGCTACAGAGAAACCCTGTCTCGAAAAACCAAATTTGCAGAAGGGATATaGCATTGTATGGATGGTATA | + |
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Preference number: 5 (lower is better) Translates to: SEFQDNQGYRETLSRKTKFAEGI*HCMDGI Trigger: TATACCATCCATACAATGCAATATCCCTTCTGCAAA...TTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGATTGTCCTGGAACTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGACATGGGGCACCTTTATTTCAGTGTATGAGTTATCTCACTCAGTATTAAGAGAGGAGGTTCTCTaGTTTGGGACTAAGATAGGA | + |
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Preference number: 5 (lower is better) Translates to: ERTWGTFISVYELSHSVLREEVL*FGTKIG Trigger: TCCTATCTTAGTCCCAAACAAGAGAACCTCCTCTCT...TAATACTGAGTGAGATAACTCATACACTGAAATAAAGGTGCCCCATGTCCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS GCA 90 bp | TCACAATATAGATCTCTGATTTTACGGGATTTGCAGAAGGGATATTaGATTGTATGGATGGTATATCCTAGAGCACTCAGAAGTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SQYRSLILRDLQKGY*IVWMVYPRALRSPR Trigger: CCTGGGACTTCTGAGTGCTCTAGGATATACCATCCATACAATGCAATATCCCTTCTGCAAATCCCGTAAAATCAGAGATCTATATTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065024.2 ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS-3UTR CAA 90 bp | CACCCCCAGTATTCCCATTTCTTTTTGCATATCCTCTATGTTCTGCTGCTAGCATTTGCAGAAGGGATATaGCATTGTATGGATGGTATA | + |
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Preference number: 5 (lower is better) Translates to: HPQYSHFFLHILYVLLLAFAEGI*HCMDGI Trigger: TATACCATCCATACAATGCAATATCCCTTCTGCAAA...TGCTAGCAGCAGAACATAGAGGATATGCAAAAAGAAATGGGAATACTGGGGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS CAA 90 bp | ACGTGGAGCTGTGCATCCATGGTGATGACCAGCAGAAGCAGCCCATaGCTGATCATAGCTAACATGTACAGGGCTGTGATTACAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: TWSCASMVMTSRSSP*LIIANMYRAVITAQ Trigger: CTGTGCTGTAATCACAGCCCTGTACATGTTAGCTATGATCAGCAATGGGCTGCTTCTGCTGGTCATCACCATGGATGCACAGCTCCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065024.2 ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS TCA 72 bp | TCTTCTGCACCACCAAGTGTCAGTGCTAGGAACATCTaGAGGGCACAGCCCTCTAATGATATGGTGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSAPPSVSARNI*RAQPSNDMVLS Trigger: AGACAACACCATATCATTAGAGGGCTGTGCCCTTCAGATGTTCCTAGCACTGACACTTGGTGGTGCAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065024.2 ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS GCA 72 bp | AGATCTCTGATTTTACGGGATTTGCAGAAGGGATATTaGATTGTATGGATGGTATATCCTAGAGCACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: RSLILRDLQKGY*IVWMVYPRALR Trigger: TCTGAGTGCTCTAGGATATACCATCCATACAATGCAATATCCCTTCTGCAAATCCCGTAAAATCAGAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065024.2 ENSMUST00000215952.2 ENSMUST00000216307.2 |
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| CDS CAA 72 bp | GGGATTTCACAATATAGATCTCTGATTTTACGGGATTaGCAGAAGGGATATTGCATTGTATGGATGGTATAT | + |
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Preference number: 6 (lower is better) Translates to: GISQYRSLILRD*QKGYCIVWMVY Trigger: ATATACCATCCATACAATGCAATATCCCTTCTGCAAATCCCGTAAAATCAGAGATCTATATTGTGAAATCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065024.2 ENSMUST00000215952.2 ENSMUST00000216307.2 |
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