Pregenerated sensors for OLFR698 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059087Ensembl transcript IDs: ENSMUST00000074981.2, ENSMUST00000214306.2, ENSMUST00000216255.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATATGCATGCCTCCTGCTCAGGGAGGCCAGAAGAGAGCATTGGATaGCCTTTAACTGGACTTAAAACTTACTGTGAGCTGCCTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: HMHASCSGRPEESIG*PLTGLKTYCELPWG Trigger: CCCCCAAGGCAGCTCACAGTAAGTTTTAAGTCCAGTTAAAGGGCATCCAATGCTCTCTTCTGGCCTCCCTGAGCAGGAGGCATGCATATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGGATGCCCTTTAACTGGACTTAAAACTTACTGTGAGCTGCCTTGGGGGTGCGGTACTCTTAACTACTaGGCAACCTTTCTAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: IGCPLTGLKTYCELPWGCGTLNY*ATFLAP Trigger: TGGAGCTAGAAAGGTTGCTCAGTAGTTAAGAGTACC...GCACCCCCAAGGCAGCTCACAGTAAGTTTTAAGTCCAGTTAAAGGGCATCCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGGATGCCCTTTAACTGGACTTAAAACTTACTGTGAGCTGCCTTGGGGGTGCACCTTTCAACTTTCCTaGACCTCTAATCTTCCTACC | + |
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Preference number: 2 (lower is better) Translates to: IGCPLTGLKTYCELPWGCTFQLS*TSNLPT Trigger: GGTAGGAAGATTAGAGGTGCAGGAAAGTTGAAAGGT...GCACCCCCAAGGCAGCTCACAGTAAGTTTTAAGTCCAGTTAAAGGGCATCCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCATGTTCTGCCAAACACCATTGCTTACACTTAGTCTCCCAATGCCTCCTTCTTTGTGTCCATATATaGCAAATCACCAGATTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LPCSAKHHCLHLVSQCLLLCVHI*QITRFS Trigger: GGAGAATCTGGTGATTTGTCATATATGGACACAAAG...AAGGAGGCATTGGGAGACTAAGTGTAAGCAATGGTGTTTGGCAGAACATGGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR GCA 90 bp | CTACCATGTTCTGCCAAACACCATTGCTTACACTTAGTCTCCCAATGCCTCCTTATTTCCACTTTAATGTaGAGTATCCCTCACACCACA | + |
|
Preference number: 2 (lower is better) Translates to: LPCSAKHHCLHLVSQCLLISTLM*SIPHTT Trigger: TGTGGTGTGAGGGATACTGCACATTAAAGTGGAAAT...AAGGAGGCATTGGGAGACTAAGTGTAAGCAATGGTGTTTGGCAGAACATGGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTCCAATATCTTATCTCTCTACCATGTTCTGCCAAACACCATTGCTTACACTCACACCACATCCATaGCAGTGTTTGTTGTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: LPPISYLSTMFCQTPLLTLTPHP*QCLLSF Trigger: AAATGACAACAAACACTGCCATGGATGTGGTGTGAG...TGTAAGCAATGGTGTTTGGCAGAACATGGTAGAGAGATAAGATATTGGAGGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR GCA 90 bp | CTACCATGTTCTGCCAAACACCATTGCTTACACTTAGTCTCCCAATGCCTCCTTGTATATGCCCAGAAGTaGCATAACTGGATTATATAT | + |
|
Preference number: 2 (lower is better) Translates to: LPCSAKHHCLHLVSQCLLVYAQK*HNWIIY Trigger: ATATATAATCCAGTTATGGCACTTCTGGGCATATAC...AAGGAGGCATTGGGAGACTAAGTGTAAGCAATGGTGTTTGGCAGAACATGGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATGTATAACACACACACACACACACACTATAATCCATGGATGGCATCTGTCCTTTGTGTCCATATATaGCAAATCACCAGATTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KMYNTHTHTHYNPWMASVLCVHI*QITRFS Trigger: GGAGAATCTGGTGATTTGTCATATATGGACACAAAG...GACAGATGCCATCCATGGATTATAGTGTGTGTGTGTGTGTGTGTTATACATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTCCAATATCTTATCTCTCTACCATGTTCTGCCAAACACCATTGCTTACAGTATATGCCCAGAAGTaGCATAACTGGATTATATAT | + |
|
Preference number: 2 (lower is better) Translates to: LPPISYLSTMFCQTPLLTVYAQK*HNWIIY Trigger: ATATATAATCCAGTTATGGCACTTCTGGGCATATAC...TGTAAGCAATGGTGTTTGGCAGAACATGGTAGAGAGATAAGATATTGGAGGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR GCA 72 bp | GCCTCCTGCTCAGGGAGGCCAGAAGAGAGCATTGGATaGCCTTTAACTGGACTTAAAACTTACTGTGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASCSGRPEESIG*PLTGLKTYCEL Trigger: CAGCTCACAGTAAGTTTTAAGTCCAGTTAAAGGGCATCCAATGCTCTCTTCTGGCCTCCCTGAGCAGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR GCA 72 bp | GGTAGTGCTTTTCTGAATGTATGCATATCCAGCATATaGATGCCTCCTGCTCAGGGAGGCCAGAAGAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSAFLNVCISSI*MPPAQGGQKRA Trigger: TGCTCTCTTCTGGCCTCCCTGAGCAGGAGGCATGCATATGCTGGATATGCATACATTCAGAAAAGCACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGGATGCCCTTTAACTGGACTTAAAACTTACTGTGAGCTGCCTTGGGGGTGCTACCTGACTGCAACTTaGTACCTCTCAATGATGATC | + |
|
Preference number: 3 (lower is better) Translates to: IGCPLTGLKTYCELPWGCYLTAT*YLSMMI Trigger: GATCATCATTGAGAGGTACAAAGTTGCAGTCAGGTA...GCACCCCCAAGGCAGCTCACAGTAAGTTTTAAGTCCAGTTAAAGGGCATCCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR GCA 72 bp | GCAACATCACATCAGAAGCTGTTGGTGCTACCTGACTaGAACTTTGTACCTCTCAATGATGATCAAAACCTC | + |
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Preference number: 3 (lower is better) Translates to: ATSHQKLLVLPD*NFVPLNDDQNL Trigger: GAGGTTTTGATCATCATTGAGAGGTACAAAGTTGCAGTCAGGTAGCACCAACAGCTTCTGATGTGATGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR GCA 72 bp | TTCCTCCCTCCAATATCTTATCTCTCTACCATGTTCTaGCAAACACCATTGCTTACACTTAGTCTCCCAATG | + |
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Preference number: 3 (lower is better) Translates to: FLPPISYLSTMF*QTPLLTLSLPM Trigger: CATTGGGAGACTAAGTGTAAGCAATGGTGTTTGGCAGAACATGGTAGAGAGATAAGATATTGGAGGGAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR GCA 72 bp | CACATTACTATGCAACATCACATCAGAAGCTGTTGGTaGTACCTGACTGCAACTTTGTACCTCTCAATGATG | + |
|
Preference number: 3 (lower is better) Translates to: HITMQHHIRSCW*YLTATLYLSMM Trigger: CATCATTGAGAGGTACAAAGTTGCAGTCAGGTAGCACCAACAGCTTCTGATGTGATGTTGCATAGTAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR CCA 72 bp | TCTCACATTACTATGCAACATCACATCAGAAGCTGTTaGTGCTACCTGACTGCAACTTTGTACCTCTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: SHITMQHHIRSC*CYLTATLYLSM Trigger: CATTGAGAGGTACAAAGTTGCAGTCAGGTAGCACCAACAGCTTCTGATGTGATGTTGCATAGTAATGTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR GCA 72 bp | ATCAAAGCTACATTCGCTAACATTTCCACTTTAATGTaGAGTATCCCTCACACCACATCCATGGCAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IKATFANISTLM*SIPHTTSMAVF Trigger: AAACACTGCCATGGATGTGGTGTGAGGGATACTGCACATTAAAGTGGAAATGTTAGCGAATGTAGCTTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR GCA 72 bp | TCTGCCAAACACCATTGCTTACACTTAGTCTCCCAATaGCTCCTTTCTAGTTTCCTAGCTTTACAAATACTC | + |
|
Preference number: 3 (lower is better) Translates to: SAKHHCLHLVSQ*LLSSFLALQIL Trigger: GAGTATTTGTAAAGCTAGGAAACTAGAAAGGAGGCATTGGGAGACTAAGTGTAAGCAATGGTGTTTGGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR GCA 72 bp | TATCTTATCTCTCTACCATGTTCTGCCAAACACCATTaGTTACACTTAGTCTCCCAATGCCTCCTTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: YLISLPCSAKHH*LHLVSQCLLSS Trigger: ACTAGAAAGGAGGCATTGGGAGACTAAGTGTAAGCAATGGTGTTTGGCAGAACATGGTAGAGAGATAAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR-3UTR CAA 90 bp | CACATCCATGGCAGTGTTTGTTGTCATTTCTCAAAGATGCTAATTCTAACCAGGAAACAGCTGATGCTTTaGCACATGTATACATTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: HIHGSVCCHFSKMLILTRKQLML*HMYTLY Trigger: GTACAATGTATACATGTGCAAAAGCATCAGCTGTTT...CCTGGTTAGAATTAGCATCTTTGAGAAATGACAACAAACACTGCCATGGATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTCCAATATCTTATCTCTCTACCATGTTCTGCCAAACACCATTGCTTACACAGAAGAAGGTCCTCTaGACTACCCAGTGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPISYLSTMFCQTPLLTQKKVL*TTQCQL Trigger: GAGCTGGCACTGGGTAGTGCAGAGGACCTTCTTCTG...TGTAAGCAATGGTGTTTGGCAGAACATGGTAGAGAGATAAGATATTGGAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR GCA 90 bp | CTACCATGTTCTGCCAAACACCATTGCTTACACTTAGTCTCCCAATGCCTCCTTATATGTGGAGGTGTCTaGACAGGCCAGCTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPCSAKHHCLHLVSQCLLICGGV*TGQLQQ Trigger: TTGCTGAAGCTGGCCTGTGCAGACACCTCCACATAT...AAGGAGGCATTGGGAGACTAAGTGTAAGCAATGGTGTTTGGCAGAACATGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR GCA 90 bp | ATAACACACACACACACACACACTATAATCCATGGATGGCATCTGTCCAATCACGAAGCAGCAGCCCATTaGTGGTCAGGGCTAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: ITHTHTHTIIHGWHLSNHEAAAH*WSGLRS Trigger: ACTTCTTAGCCCTGACCAGCAATGGGCTGCTGCTTC...GTGATTGGACAGATGCCATCCATGGATTATAGTGTGTGTGTGTGTGTGTGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR GCA 90 bp | TCCACATTTTTATACACCTTTCAACTTTCCTGCACCTCTAATCTTCCTACCTCTCAGAAGAAGGTCCTCTaGACTACCCAGTGCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: STFLYTFQLSCTSNLPTSQKKVL*TTQCQL Trigger: GAGCTGGCACTGGGTAGTGCAGAGGACCTTCTTCTG...AGAGGTAGGAAGATTAGAGGTGCAGGAAAGTTGAAAGGTGTATAAAAATGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR GCA 90 bp | TCACACCACATCCATGGCAGTGTTTGTTGTCATTTCTCAAAGATGCTAATTCTAGAAGCAGCAGCCCATTaGTGGTCAGGGCTAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SHHIHGSVCCHFSKMLILEAAAH*WSGLRS Trigger: ACTTCTTAGCCCTGACCAGCAATGGGCTGCTGCTTC...TAGAATTAGCATCTTTGAGAAATGACAACAAACACTGCCATGGATGTGGTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR TCA 90 bp | CACATCCATGGCAGTGTTTGTTGTCATTTCTCAAAGATGCTAATTCTAACCAGGTATATCCTAGAGCACTaGGGGATGCCAAGATCCATG | + |
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Preference number: 4 (lower is better) Translates to: HIHGSVCCHFSKMLILTRYILEH*GMPRSM Trigger: CATGGATCTTGGCATCCCTCAGTGCTCTAGGATATA...CCTGGTTAGAATTAGCATCTTTGAGAAATGACAACAAACACTGCCATGGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR TCA 90 bp | CATTTTTATACACCTTTCAACTTTCCTGCACCTCTAATCTTCCTACCTCTTCTCTCTTGTTTGGGGCTGTaGAAGGGACTGGGTAGAACA | + |
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Preference number: 4 (lower is better) Translates to: HFYTPFNFPAPLIFLPLLSCLGL*KGLGRT Trigger: TGTTCTACCCAGTCCCTTTCACAGCCCCAAACAAGA...GAGAAGAGGTAGGAAGATTAGAGGTGCAGGAAAGTTGAAAGGTGTATAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR TCA 90 bp | CCTCCAATATCTTATCTCTCTACCATGTTCTGCCAAACACCATTGCTTACACTTTCTTCAAAGCTCCAGTaGCCTCTTTATTCCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PPISYLSTMFCQTPLLTLSSKLQ*PLYSSG Trigger: GCCTGAGGAATAAAGAGGTCACTGGAGCTTTGAAGA...AAGTGTAAGCAATGGTGTTTGGCAGAACATGGTAGAGAGATAAGATATTGGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR CAA 72 bp | TGTGCAGTATCCCTCACACCACATCCATGGCAGTGTTaGTTGTCATTTCTCAAAGATGCTAATTCTAACCAG | + |
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Preference number: 4 (lower is better) Translates to: CAVSLTPHPWQC*LSFLKDANSNQ Trigger: CTGGTTAGAATTAGCATCTTTGAGAAATGACAACAAACACTGCCATGGATGTGGTGTGAGGGATACTGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR TCA 90 bp | TCACACCACATCCATGGCAGTGTTTGTTGTCATTTCTCAAAGATGCTAATTCTATCTTCAAAGCTCCAGTaGCCTCTTTATTCCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SHHIHGSVCCHFSKMLILSSKLQ*PLYSSG Trigger: GCCTGAGGAATAAAGAGGTCACTGGAGCTTTGAAGA...TAGAATTAGCATCTTTGAGAAATGACAACAAACACTGCCATGGATGTGGTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| 3UTR CAA 72 bp | TTCTCACATTACTATGCAACATCACATCAGAAGCTGTaGGTGCTACCTGACTGCAACTTTGTACCTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: FSHYYATSHQKL*VLPDCNFVPLN Trigger: ATTGAGAGGTACAAAGTTGCAGTCAGGTAGCACCAACAGCTTCTGATGTGATGTTGCATAGTAATGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGGAAAAATGTATAACACACACACACACACACACTATAATCCATGGATGGTATATCCTAGAGCACTaGGGGATGCCAAGATCCATG | + |
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Preference number: 4 (lower is better) Translates to: RKEKCITHTHTHTIIHGWYILEH*GMPRSM Trigger: CATGGATCTTGGCATCCCTCAGTGCTCTAGGATATA...CCATCCATGGATTATAGTGTGTGTGTGTGTGTGTGTTATACATTTTTCCTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR TCA 90 bp | ATAACACACACACACACACACACTATAATCCATGGATGGCATCTGTCCAATCACATATGGTATTGTCTTTaGGGAGAAAATCCACAACAG | + |
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Preference number: 4 (lower is better) Translates to: ITHTHTHTIIHGWHLSNHIWYCL*GENPQQ Trigger: CTGTTGTGGATTTTCTCCTCAAAGACAATACCATAT...GTGATTGGACAGATGCCATCCATGGATTATAGTGTGTGTGTGTGTGTGTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR TCA 90 bp | TCCACATTTTTATACACCTTTCAACTTTCCTGCACCTCTAATCTTCCTACCTCTATATGGTATTGTCTTTaGGGAGAAAATCCACAACAG | + |
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Preference number: 4 (lower is better) Translates to: STFLYTFQLSCTSNLPTSIWYCL*GENPQQ Trigger: CTGTTGTGGATTTTCTCCTCAAAGACAATACCATAT...AGAGGTAGGAAGATTAGAGGTGCAGGAAAGTTGAAAGGTGTATAAAAATGTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | TATCCCTCACACCACATCCATGGCAGTGTTTGTTGTCATTTCTCAAAGATGCTAAGAAGCAGCAGCCCATaGCTGGTCAGGGCTAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: YPSHHIHGSVCCHFSKMLRSSSP*LVRAKK Trigger: CTTCTTAGCCCTGACCAGCAATGGGCTGCTGCTTCT...TAGCATCTTTGAGAAATGACAACAAACACTGCCATGGATGTGGTGTGAGGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | CATTTTTATACACCTTTCAACTTTCCTGCACCTCTAATCTTCCTACCTCTTCTCAGAAGCAGCAGCCCATaGCTGGTCAGGGCTAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HFYTPFNFPAPLIFLPLLRSSSP*LVRAKK Trigger: CTTCTTAGCCCTGACCAGCAATGGGCTGCTGCTTCT...GAGAAGAGGTAGGAAGATTAGAGGTGCAGGAAAGTTGAAAGGTGTATAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | TCACACCACATCCATGGCAGTGTTTGTTGTCATTTCTCAAAGATGCTAATTCTAAAATCCACAACAGCCTaGGGAGTGATAACTGATGTG | + |
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Preference number: 5 (lower is better) Translates to: SHHIHGSVCCHFSKMLILKSTTA*GVITDV Trigger: CACATCAGTTATCACTCCCAAGGCTGTTGTGGATTT...TAGAATTAGCATCTTTGAGAAATGACAACAAACACTGCCATGGATGTGGTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | AAAATGTATAACACACACACACACACACACTATAATCCATGGATGGCATCTGTCAAATCCACAACAGCCTaGGGAGTGATAACTGATGTG | + |
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Preference number: 5 (lower is better) Translates to: KMYNTHTHTHYNPWMASVKSTTA*GVITDV Trigger: CACATCAGTTATCACTCCCAAGGCTGTTGTGGATTT...GACAGATGCCATCCATGGATTATAGTGTGTGTGTGTGTGTGTGTTATACATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | ATAACACACACACACACACACACTATAATCCATGGATGGCATCTGTCCAATCACTGTGACTCATTAAGATaGTGTAGTTCAGAGGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: ITHTHTHTIIHGWHLSNHCDSLR*CSSEVD Trigger: GTCAACCTCTGAACTACACAATCTTAATGAGTCACA...GTGATTGGACAGATGCCATCCATGGATTATAGTGTGTGTGTGTGTGTGTGTTAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | ATAACACACACACACACACACACTATAATCCATGGATGGCATCTGTCCAATCACGATATGGTATTGTCTTaGAGGAGAAAATCCACAACA | + |
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Preference number: 5 (lower is better) Translates to: ITHTHTHTIIHGWHLSNHDMVLS*RRKSTT Trigger: TGTTGTGGATTTTCTCCTCAAAGACAATACCATATC...GTGATTGGACAGATGCCATCCATGGATTATAGTGTGTGTGTGTGTGTGTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | TCACACCACATCCATGGCAGTGTTTGTTGTCATTTCTCAAAGATGCTAATTCTACCAAAGGATATGGTATaGTCTTTGAGGAGAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: SHHIHGSVCCHFSKMLILPKDMV*SLRRKS Trigger: GGATTTTCTCCTCAAAGACAATACCATATCCTTTGG...TAGAATTAGCATCTTTGAGAAATGACAACAAACACTGCCATGGATGTGGTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | CATTTTTATACACCTTTCAACTTTCCTGCACCTCTAATCTTCCTACCTCTTCTCCCAAAGGATATGGTATaGTCTTTGAGGAGAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: HFYTPFNFPAPLIFLPLLPKDMV*SLRRKS Trigger: GGATTTTCTCCTCAAAGACAATACCATATCCTTTGG...GAGAAGAGGTAGGAAGATTAGAGGTGCAGGAAAGTTGAAAGGTGTATAAAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGGAAAAATGTATAACACACACACACACACACACTATAATCCATGGATGGTGTGACTCATTAAGATaGTGTAGTTCAGAGGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: RKEKCITHTHTHTIIHGWCDSLR*CSSEVD Trigger: GTCAACCTCTGAACTACACAATCTTAATGAGTCACA...CCATCCATGGATTATAGTGTGTGTGTGTGTGTGTGTTATACATTTTTCCTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS TCA 72 bp | GTTTGGGGCTGTGAAAGGGACTGGGTAGAACATACATaGAGGAAGCACCCCCATACCACATCCCAACTACAG | + |
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Preference number: 6 (lower is better) Translates to: VWGCERDWVEHT*RKHPHTTSQLQ Trigger: CTGTAGTTGGGATGTGGTATGGGGGTGCTTCCTTCATGTATGTTCTACCCAGTCCCTTTCACAGCCCCAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074981.2 ENSMUST00000214306.2 ENSMUST00000216255.2 |
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| CDS CCA 72 bp | AGAGAAAGCTGTCCAAGTAGAAGATACATGGGCACATaGAGCCGGGCATCCATGGTGATGACTAGAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RESCPSRRYMGT*SRASMVMTRSS Trigger: GCTGCTTCTAGTCATCACCATGGATGCCCGGCTCCATGTGCCCATGTATCTTCTACTTGGACAGCTTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074981.2 ENSMUST00000214306.2 ENSMUST00000216255.2 |
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