Pregenerated sensors for OLFR693 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051680Ensembl transcript IDs: ENSMUST00000057817.3, ENSMUST00000215541.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTAAATATGAACTCACCACAGTTGTGCCAGCAGGCACAAGACCTGTaGAAGCTCAAGTCAGACAAAATTCCAACACGGAAGAGGCAAGGG | + |
Preference number: 1 (lower is better) Translates to: VNMNSPQLCQQAQDL*KLKSDKIPTRKRQG Trigger: CCCTTGCCTCTTCCGTGTTGGAATTTTGTCTGACTTGAGCTTGCACAGGTCTTGTGCCTGCTGGCACAACTGTGGTGAGTTCATATTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CCA 90 bp | ATACTCAGGGATCATTGTGAAAGGTGGGACTATAAGAGTCAGAGGTaGTGGATGACTACAAAGATGTCTTTCCTGGACACAATAGGGAAG | + |
Preference number: 1 (lower is better) Translates to: ILRDHCERWDYKSQR*WMTTKMSFLDTIGK Trigger: CTTCCCTATTGTGTCCAGGAAAGACATCTTTGTAGTCATCCACCACCTCTGACTCTTATAGTCCCACCTTTCACAATGATCCCTGAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CCA 90 bp | GCCAAGCTGCAGAAAGTAAAAGACTATAGAATGCTCAGCTTTAAGTaGGACATCTGGATTATACCCTTTCCTCCCAATACTCAGGGATCA | + |
Preference number: 1 (lower is better) Translates to: AKLQKVKDYRMLSFK*DIWIIPFPPNTQGS Trigger: TGATCCCTGAGTATTGGGAGGAAAGGGTATAATCCAGATGTCCCACTTAAAGCTGAGCATTCTATAGTCTTTTACTTTCTGCAGCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR TCA 90 bp | AAGCATGGAGTACTGTATGACATTTTGACACATATAAACACCAAATaGTGTTCCAGTCATGTACATGCACCAGATATAGCGACCACTAAT | + |
Preference number: 1 (lower is better) Translates to: KHGVLYDILTHINTK*CSSHVHAPDIATTN Trigger: ATTAGTGGTCGCTATATCTGGTGCATGTACATGACTGGAACATCATTTGGTGTTTATATGTGTCAAAATGTCATACAGTACTCCATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CCA 90 bp | GTTATACAAAAAGGAAGTTTCCATTGTTTGAGCTTTACACATCCTTaGTTACATTTAGTCCTTGACACTGCTGTTATTCTGCTAAATGGT | + |
Preference number: 1 (lower is better) Translates to: VIQKGSFHCLSFTHP*LHLVLDTAVILLNG Trigger: ACCATTTAGCAGAATAACAGCAGTGTCAAGGACTAAATGTAACCAAGGATGTGTAAAGCTCAAACAATGGAAACTTCCTTTTTGTATAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR-3UTR CCA 90 bp | TATGAACTCACCACAGTTGTGCCAGCAGGCACAAGACCTGTGCAAGCTCAAGTCCATGATGCAAATCTATaGCAGCTGAACACTGGACAA | + |
Preference number: 2 (lower is better) Translates to: YELTTVVPAGTRPVQAQVHDANL*QLNTGQ Trigger: TTGTCCAGTGTTCAGCTGCCATAGATTTGCATCATG...GACTTGAGCTTGCACAGGTCTTGTGCCTGCTGGCACAACTGTGGTGAGTTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CAA 90 bp | TCAACCTGCTGTGTAGTGGCACTCCAGAACTTCCACTCTCCAACCTaGAGTCTGCACCTACTGATCAATAATTCCCTGCTCTCTATACTA | + |
Preference number: 2 (lower is better) Translates to: STCCVVALQNFHSPT*SLHLLINNSLLSIL Trigger: TAGTATAGAGAGCAGGGAATTATTGATCAGTAGGTGCAGACTCAAGGTTGGAGAGTGGAAGTTCTGGAGTGCCACTACACAGCAGGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR-3UTR CCA 90 bp | TATGAACTCACCACAGTTGTGCCAGCAGGCACAAGACCTGTGCAAGCTCAAGTCGACTATGGGTTATATTaGGTGGTAATATCTTTGATC | + |
Preference number: 2 (lower is better) Translates to: YELTTVVPAGTRPVQAQVDYGLY*VVISLI Trigger: GATCAAAGATATTACCACCCAATATAACCCATAGTC...GACTTGAGCTTGCACAGGTCTTGTGCCTGCTGGCACAACTGTGGTGAGTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR-3UTR CCA 90 bp | GATGACTACAAAGATGTCTTTCCTGGACACAATAGGGAAGTTGTAAATATGAACATGCAATCTAAGCCCTaGCATCCATCAGACCATCTA | + |
Preference number: 2 (lower is better) Translates to: DDYKDVFPGHNREVVNMNMQSKP*HPSDHL Trigger: TAGATGGTCTGATGGATGCCAGGGCTTAGATTGCAT...GTTCATATTTACAACTTCCCTATTGTGTCCAGGAAAGACATCTTTGTAGTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR-3UTR CCA 90 bp | GATGACTACAAAGATGTCTTTCCTGGACACAATAGGGAAGTTGTAAATATGAACAGATCTATAAATGCTTaGTATACTTACCATCAGCAC | + |
Preference number: 2 (lower is better) Translates to: DDYKDVFPGHNREVVNMNRSINA*YTYHQH Trigger: GTGCTGATGGTAAGTATACCAAGCATTTATAGATCT...GTTCATATTTACAACTTCCCTATTGTGTCCAGGAAAGACATCTTTGTAGTCATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CCA 72 bp | CCTTTCCTCCCAATACTCAGGGATCATTGTGAAAGGTaGGACTATAAGAGTCAGAGGTGGTGGATGACTACA | + |
Preference number: 3 (lower is better) Translates to: PFLPILRDHCER*DYKSQRWWMTT Trigger: TGTAGTCATCCACCACCTCTGACTCTTATAGTCCCACCTTTCACAATGATCCCTGAGTATTGGGAGGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CCA 72 bp | CATTGTGAAAGGTGGGACTATAAGAGTCAGAGGTGGTaGATGACTACAAAGATGTCTTTCCTGGACACAATA | + |
Preference number: 3 (lower is better) Translates to: HCERWDYKSQRW*MTTKMSFLDTI Trigger: TATTGTGTCCAGGAAAGACATCTTTGTAGTCATCCACCACCTCTGACTCTTATAGTCCCACCTTTCACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CCA 72 bp | AAAGACTATAGAATGCTCAGCTTTAAGTGGGACATCTaGATTATACCCTTTCCTCCCAATACTCAGGGATCA | + |
Preference number: 3 (lower is better) Translates to: KDYRMLSFKWDI*IIPFPPNTQGS Trigger: TGATCCCTGAGTATTGGGAGGAAAGGGTATAATCCAGATGTCCCACTTAAAGCTGAGCATTCTATAGTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR-3UTR CAA 90 bp | GATATAGCGACCACTAATAAGGGCGAGATGTGTTCATGGAAAAATGGAAAATCAGACCATCTAGCAAGCTaGATGCTTAGAGAGAGAGAT | + |
Preference number: 3 (lower is better) Translates to: DIATTNKGEMCSWKNGKSDHLAS*MLRERD Trigger: ATCTCTCTCTCTAAGCATCAAGCTTGCTAGATGGTC...TGATTTTCCATTTTTCCATGAACACATCTCGCCCTTATTAGTGGTCGCTATATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR TCA 72 bp | GAGAGATGGGTAAGCATGATGCAAATCTATGGCAGCTaGACACTGGACAAAGCTGTCATTGTAGATAAAATA | + |
Preference number: 3 (lower is better) Translates to: ERWVSMMQIYGS*TLDKAVIVDKI Trigger: TATTTTATCTACAATGACAGCTTTGTCCAGTGTTCAGCTGCCATAGATTTGCATCATGCTTACCCATCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR GCA 72 bp | TTTGAAATTCACTTACATAGTTTTCAATCATCAACCTaGTGTGTAGTGGCACTCCAGAACTTCCACTCTCCA | + |
Preference number: 3 (lower is better) Translates to: FEIHLHSFQSST*CVVALQNFHSP Trigger: TGGAGAGTGGAAGTTCTGGAGTGCCACTACACAGCAGGTTGATGATTGAAAACTATGTAAGTGAATTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR TCA 72 bp | GTACTGTATGACATTTTGACACATATAAACACCAAATaGTGTTCCAGTCATGTACATGCACCAGATATAGCG | + |
Preference number: 3 (lower is better) Translates to: VLYDILTHINTK*CSSHVHAPDIA Trigger: CGCTATATCTGGTGCATGTACATGACTGGAACATCATTTGGTGTTTATATGTGTCAAAATGTCATACAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CCA 72 bp | AAAGGAAGTTTCCATTGTTTGAGCTTTACACATCCTTaGTTACATTTAGTCCTTGACACTGCTGTTATTCTG | + |
Preference number: 3 (lower is better) Translates to: KGSFHCLSFTHP*LHLVLDTAVIL Trigger: CAGAATAACAGCAGTGTCAAGGACTAAATGTAACCAAGGATGTGTAAAGCTCAAACAATGGAAACTTCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR CCA 90 bp | TATGAACTCACCACAGTTGTGCCAGCAGGCACAAGACCTGTGCAAGCTCAAGTCGGCACTCAGAGAAGCTaGAATCCAGGAGATGGCCAC | + |
Preference number: 4 (lower is better) Translates to: YELTTVVPAGTRPVQAQVGTQRS*NPGDGH Trigger: GTGGCCATCTCCTGGATTCCAGCTTCTCTGAGTGCC...GACTTGAGCTTGCACAGGTCTTGTGCCTGCTGGCACAACTGTGGTGAGTTCATA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR TCA 90 bp | AACCTGCTGTGTAGTGGCACTCCAGAACTTCCACTCTCCAACCTTGAGTCTGCACTTTCTTCCCTCGTTTaGGGGCATTTTGAGCACAGT | + |
Preference number: 4 (lower is better) Translates to: NLLCSGTPELPLSNLESALSSLV*GHFEHS Trigger: ACTGTGCTCAAAATGCCCTCAAACGAGGGAAGAAAG...TGCAGACTCAAGGTTGGAGAGTGGAAGTTCTGGAGTGCCACTACACAGCAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR TCA 90 bp | AACCTGCTGTGTAGTGGCACTCCAGAACTTCCACTCTCCAACCTTGAGTCTGCATCAGCATTCCATTGCTaGTCAGTGCCAACATGTACA | + |
Preference number: 4 (lower is better) Translates to: NLLCSGTPELPLSNLESASAFHC*SVPTCT Trigger: TGTACATGTTGGCACTGATCAGCAATGGAATGCTGA...TGCAGACTCAAGGTTGGAGAGTGGAAGTTCTGGAGTGCCACTACACAGCAGGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CAA 72 bp | TGTGTAGTGGCACTCCAGAACTTCCACTCTCCAACCTaGAGTCTGCACCTACTGATCAATAATTCCCTGCTC | + |
Preference number: 4 (lower is better) Translates to: CVVALQNFHSPT*SLHLLINNSLL Trigger: GAGCAGGGAATTATTGATCAGTAGGTGCAGACTCAAGGTTGGAGAGTGGAAGTTCTGGAGTGCCACTACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR TCA 90 bp | TATGAACTCACCACAGTTGTGCCAGCAGGCACAAGACCTGTGCAAGCTCAAGTCAGATGCTTGGCCTCATaGATATCATGTAGTTCAATG | + |
Preference number: 4 (lower is better) Translates to: YELTTVVPAGTRPVQAQVRCLAS*ISCSSM Trigger: CATTGAACTACATGATATTCATGAGGCCAAGCATCT...GACTTGAGCTTGCACAGGTCTTGTGCCTGCTGGCACAACTGTGGTGAGTTCATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR TCA 90 bp | AACCTGCTGTGTAGTGGCACTCCAGAACTTCCACTCTCCAACCTTGAGTCTGCACCATCAAATAAACCATaGGTTGATATCTGGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: NLLCSGTPELPLSNLESAPSNKP*VDIWRC Trigger: ACACCTCCAGATATCAACTCATGGTTTATTTGATGG...TGCAGACTCAAGGTTGGAGAGTGGAAGTTCTGGAGTGCCACTACACAGCAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CAA 72 bp | CACAATAGGGAAGTTGTAAATATGAACTCACCACAGTaGTGCCAGCAGGCACAAGACCTGTGCAAGCTCAAG | + |
Preference number: 4 (lower is better) Translates to: HNREVVNMNSPQ*CQQAQDLCKLK Trigger: CTTGAGCTTGCACAGGTCTTGTGCCTGCTGGCACAACTGTGGTGAGTTCATATTTACAACTTCCCTATTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR GCA 90 bp | GAAATGAAGAGTGAGTTTTCTTCAAGTGAATGGCCCCTAGTAAGTTGTATAGTGCAGAAGGAGGTCCTCTaGACTACCCAGTGCCAGTTC | + |
Preference number: 4 (lower is better) Translates to: EMKSEFSSSEWPLVSCIVQKEVL*TTQCQF Trigger: GAACTGGCACTGGGTAGTGCAGAGGACCTCCTTCTG...CACTATACAACTTACTAGGGGCCATTCACTTGAAGAAAACTCACTCTTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR TCA 90 bp | GATGACTACAAAGATGTCTTTCCTGGACACAATAGGGAAGTTGTAAATATGAACCAGCAAGAGGAGGGATaGGCAAGGTCACACCCATCA | + |
Preference number: 4 (lower is better) Translates to: DDYKDVFPGHNREVVNMNQQEEG*ARSHPS Trigger: TGATGGGTGTGACCTTGCTCATCCCTCCTCTTGCTG...GTTCATATTTACAACTTCCCTATTGTGTCCAGGAAAGACATCTTTGTAGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CAA 72 bp | AGTGAATGGCCCCTAGTAAGTTGTATAGTGCAGGGTTaGGCTATAAACCCAAAAGCATATGGGCAGCACATA | + |
Preference number: 4 (lower is better) Translates to: SEWPLVSCIVQG*AINPKAYGQHI Trigger: TATGTGCTGCCCATATGCTTTTGGGTTTATAGCCAAACCCTGCACTATACAACTTACTAGGGGCCATTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR TCA 90 bp | GATGACTACAAAGATGTCTTTCCTGGACACAATAGGGAAGTTGTAAATATGAACACCTGTCATAAGCCATaGAGGCCAGAAGGAGGTCCT | + |
Preference number: 4 (lower is better) Translates to: DDYKDVFPGHNREVVNMNTCHKP*RPEGGP Trigger: AGGACCTCCTTCTGGCCTTCATGGCTTATGACAGGT...GTTCATATTTACAACTTCCCTATTGTGTCCAGGAAAGACATCTTTGTAGTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR GCA 90 bp | GAAATGAAGAGTGAGTTTTCTTCAAGTGAATGGCCCCTAGTAAGTTGTATAGTGTCCATTGCTGATCAGTaGCAACATGTACAGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: EMKSEFSSSEWPLVSCIVSIADQ*QHVQGS Trigger: GCTGCCCTGTACATGTTGGCACTGATCAGCAATGGA...CACTATACAACTTACTAGGGGCCATTCACTTGAAGAAAACTCACTCTTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR TCA 90 bp | GATATAGCGACCACTAATAAGGGCGAGATGTGTTCATGGAAAAATGGAAAATCATCTTCAAAGCCCCACTaGCCTCTTTATTTCTTAAAC | + |
Preference number: 4 (lower is better) Translates to: DIATTNKGEMCSWKNGKSSSKPH*PLYFLN Trigger: GTTTAAGAAATAAAGAGGTCAGTGGGGCTTTGAAGA...TGATTTTCCATTTTTCCATGAACACATCTCGCCCTTATTAGTGGTCGCTATATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR CCA 90 bp | GAAATGAAGAGTGAGTTTTCTTCAAGTGAATGGCCCCTAGTAAGTTGTATAGTGCAAGCAAGAGGTACATaGGAACATGGAGGTAAATAT | + |
Preference number: 4 (lower is better) Translates to: EMKSEFSSSEWPLVSCIVQARGT*EHGGKY Trigger: ATATTTACCTCCATGTTCCCATGTACCTCTTGCTTG...CACTATACAACTTACTAGGGGCCATTCACTTGAAGAAAACTCACTCTTCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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3UTR CAA 72 bp | TATTGCGTCTTTGAGCTCTTGTCAGTGAAGATCTTCTaGTATTTGATGATAATTAACACAGAGACACATAAC | + |
Preference number: 4 (lower is better) Translates to: YCVFELLSVKIF*YLMIINTETHN Trigger: GTTATGTGTCTCTGTGTTAATTATCATCAAATACAAGAAGATCTTCACTGACAAGAGCTCAAAGACGCAATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS CCA 90 bp | GTACTGCATAGTGTAGATGGTATATCCCAGGGCACTCAGAGAAGCTaGAATCCAGGAGATGGCCACCATAAGCCAGCAGATGCTTGGCCT | + |
Preference number: 5 (lower is better) Translates to: VLHSVDGISQGTQRS*NPGDGHHKPADAWP Trigger: AGGCCAAGCATCTGCTGGCTTATGGTGGCCATCTCCTGGATTCCAGCTTCTCTGAGTGCCCTGGGATATACCATCTACACTATGCAGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057817.3 ENSMUST00000215541.2 |
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CDS-3UTR CAA 90 bp | AACCTGCTGTGTAGTGGCACTCCAGAACTTCCACTCTCCAACCTTGAGTCTGCACTAATCTCCCGGGATTaGCAGAAGGGGTACTGCATA | + |
Preference number: 5 (lower is better) Translates to: NLLCSGTPELPLSNLESALISRD*QKGYCI Trigger: TATGCAGTACCCCTTCTGCAAATCCCGGGAGATTAG...TGCAGACTCAAGGTTGGAGAGTGGAAGTTCTGGAGTGCCACTACACAGCAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR CAA 90 bp | TATGAACTCACCACAGTTGTGCCAGCAGGCACAAGACCTGTGCAAGCTCAAGTCAGGATCAGCATTCCATaGCTGATCAGTGCCAACATG | + |
Preference number: 5 (lower is better) Translates to: YELTTVVPAGTRPVQAQVRISIP*LISANM Trigger: CATGTTGGCACTGATCAGCAATGGAATGCTGATCCT...GACTTGAGCTTGCACAGGTCTTGTGCCTGCTGGCACAACTGTGGTGAGTTCATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR CAA 90 bp | AGAGAGATGGGTAAGCATGATGCAAATCTATGGCAGCTGAACACTGGACAAAGCGTGATGGTGTTGTCTTaGAGCAGAAAGTCCATGACA | + |
Preference number: 5 (lower is better) Translates to: REMGKHDANLWQLNTGQSVMVLS*SRKSMT Trigger: TGTCATGGACTTTCTGCTCAAAGACAACACCATCAC...GCTTTGTCCAGTGTTCAGCTGCCATAGATTTGCATCATGCTTACCCATCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR CAA 90 bp | GATATAGCGACCACTAATAAGGGCGAGATGTGTTCATGGAAAAATGGAAAATCAAAGTCCATGACAGCTTaGGGACTGATAACTGAGGCG | + |
Preference number: 5 (lower is better) Translates to: DIATTNKGEMCSWKNGKSKSMTA*GLITEA Trigger: CGCCTCAGTTATCAGTCCCAAAGCTGTCATGGACTT...TGATTTTCCATTTTTCCATGAACACATCTCGCCCTTATTAGTGGTCGCTATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS-3UTR CAA 90 bp | GATATAGCGACCACTAATAAGGGCGAGATGTGTTCATGGAAAAATGGAAAATCACAAATAAACCATGAGTaGATATCTGGAGGTGTCTGC | + |
Preference number: 5 (lower is better) Translates to: DIATTNKGEMCSWKNGKSQINHE*ISGGVC Trigger: GCAGACACCTCCAGATATCAACTCATGGTTTATTTG...TGATTTTCCATTTTTCCATGAACACATCTCGCCCTTATTAGTGGTCGCTATATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215541.2 |
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CDS CCA 72 bp | AGTGTAGATGGTATATCCCAGGGCACTCAGAGAAGCTaGAATCCAGGAGATGGCCACCATAAGCCAGCAGAT | + |
Preference number: 6 (lower is better) Translates to: SVDGISQGTQRS*NPGDGHHKPAD Trigger: ATCTGCTGGCTTATGGTGGCCATCTCCTGGATTCCAGCTTCTCTGAGTGCCCTGGGATATACCATCTACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057817.3 ENSMUST00000215541.2 |