Pregenerated sensors for OLFR691 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043948Ensembl transcript IDs: ENSMUST00000057528.2, ENSMUST00000213290.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCACTTCTACTCCAACAACAACACACCTAATAGTGCCACTCTCTaGGCCAAGCATATTCAAACCACCACACAGTCATTTCTGGTTACA | + |
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Preference number: 1 (lower is better) Translates to: GHFYSNNNTPNSATL*AKHIQTTTQSFLVT Trigger: TGTAACCAGAAATGACTGTGTGGTGGTTTGAATATGCTTGGCCCAGAGAGTGGCACTATTAGGTGTGTTGTTGTTGGAGTAGAAGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR TCA 90 bp | CAACTTACTACTACTAATTCTGCACATGTAGAGATTCTTATGAGATaGACTAGGCAGGCAAAAGTAGGAGCTGTGGCTTGCCTGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: QLTTTNSAHVEILMR*TRQAKVGAVACLEK Trigger: TTTCTCCAGGCAAGCCACAGCTCCTACTTTTGCCTGCCTAGTTCATCTCATAAGAATCTCTACATGTGCAGAATTAGTAGTAGTAAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR CCA 90 bp | CCACTCTCTGGGCCAAGCATATTCAAACCACCACACAGTCATTTCTaGTTACAAAGAAATGAGCAACTTACTACTACTAATTCTGCACAT | + |
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Preference number: 1 (lower is better) Translates to: PLSGPSIFKPPHSHF*LQRNEQLTTTNSAH Trigger: ATGTGCAGAATTAGTAGTAGTAAGTTGCTCATTTCTTTGTAACCAGAAATGACTGTGTGGTGGTTTGAATATGCTTGGCCCAGAGAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGTCCATCATCATCAAGTTGGGAGCAAGCAGTATCCAGGCAGGCATGGCGCAAGAACAACCCTGCTaGCTTAGCTTCCTCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VQSIIIKLGASSIQAGMAQEQPC*LSFLSA Trigger: AGCACTGAGGAAGCTAAGGCAGCAGGGTTGTTCTTG...CGCCATGCCTGCCTGGATACTGCTTGCTCCCAACTTGATGATGATGGACTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTTTACAGGTTCGTAGGTTCAGTCCATCATCATCAAGTTGGGAGCAAGCTACCACCACTCTGCTaGCAAAGTAGTTCTCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GLVYRFVGSVHHHQVGSKLPPLC*QSSSQV Trigger: AACCTGAGAACTACTTTGTCAGCAGAGTGGTGGTAG...CTTGCTCCCAACTTGATGATGATGGACTGAACCTACGAACCTGTAAACCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCTGGGCCAAGCATATTCAAACCACCACACAGTCATTTCTGGTTACAAACAGTTACTGAGAAAGTaGAATGCTCATATCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: HSLGQAYSNHHTVISGYKQLLRK*NAHIRE Trigger: TTCTCTGATATGAGCATTTCACTTTCTCAGTAACTG...TTTGTAACCAGAAATGACTGTGTGGTGGTTTGAATATGCTTGGCCCAGAGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR GCA 72 bp | AGACCCCAATACCCAACTCCTGCCCCTGCCTATCTCTaGCTCCCAAGTGCTGAGACTAAAGGTGTGCGCTAC | + |
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Preference number: 3 (lower is better) Translates to: RPQYPTPAPAYL*LPSAETKGVRY Trigger: GTAGCGCACACCTTTAGTCTCAGCACTTGGGAGGCAGAGATAGGCAGGGGCAGGAGTTGGGTATTGGGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR CCA 72 bp | TTACAGGTTCGTAGGTTCAGTCCATCATCATCAAGTTaGGAGCAAGCAGTATCCAGGCAGGCATGGCGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LQVRRFSPSSSS*EQAVSRQAWRR Trigger: CCTGCGCCATGCCTGCCTGGATACTGCTTGCTCCCAACTTGATGATGATGGACTGAACCTACGAACCTGTAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCAGTCCATCATCATCAAGTTGGGAGCAAGCAGTATCCAGGCAGGCATGGCGGAAAATAGGAAAGACTaGACAGAGAAGGTAGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: VQSIIIKLGASSIQAGMAENRKD*TEKVVS Trigger: GGAAACTACCTTCTCTGTCAAGTCTTTCCTATTTTC...CGCCATGCCTGCCTGGATACTGCTTGCTCCCAACTTGATGATGATGGACTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR TCA 72 bp | ACTACTAATTCTGCACATGTAGAGATTCTTATGAGATaGACTAGGCAGGCAAAAGTAGGAGCTGTGGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: TTNSAHVEILMR*TRQAKVGAVAC Trigger: GCAAGCCACAGCTCCTACTTTTGCCTGCCTAGTTCATCTCATAAGAATCTCTACATGTGCAGAATTAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR GCA 72 bp | GAAGCAAAAGACAATCTTCTCTGTCCAGGAGATCTGTaGTCCTTGGTGAAGCTGAATATAAAGATTGACAGG | + |
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Preference number: 3 (lower is better) Translates to: EAKDNLLCPGDL*SLVKLNIKIDR Trigger: CCTGTCAATCTTTATATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTGTCTTTTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR GCA 72 bp | ACTTCCTGTGATATATCAGTTACTGAGAAAGTGAAATaGTCATATCAGAGAAATGTACAGTTAACCATCTCT | + |
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Preference number: 3 (lower is better) Translates to: TSCDISVTEKVK*SYQRNVQLTIS Trigger: AGAGATGGTTAACTGTACATTTCTCTGATATGAGCATTTCACTTTCTCAGTAACTGATATATCACAGGAAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR GCA 90 bp | GCCAAGCTATTCTCAAACCAAGAACAACCCTGCTGCCTTAGCTTCCTCAGTGCTGTGCTGAGAGCTTTGTaGCGAGCATCCTGGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: AKLFSNQEQPCCLSFLSAVLRAL*RASWEG Trigger: GCCCTCCCAGGATGCTCGGCACAAAGCTCTCAGCAC...AGCACTGAGGAAGCTAAGGCAGCAGGGTTGTTCTTGGTTTGAGAATAGCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR TCA 90 bp | CCTGCCTATCTCTGCCTCCCAAGTGCTGAGACTAAAGGTGTGCGCTACCACCACCAAAGAAGACTTGGGTaGCACAGGCATCAAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PAYLCLPSAETKGVRYHHQRRLG*HRHQRQ Trigger: TTGCCTTTGATGCCTGTGTCACCCAAGTCTTCTTTG...GTGGTGGTAGCGCACACCTTTAGTCTCAGCACTTGGGAGGCAGAGATAGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR TCA 90 bp | GTCATGCATCTAAAGGCCACTAGGAAAAAGACTGGCTTCCAGGCAGTCAGGAGGACAGTAAGATGTCCGTaGTGGCCAACATGGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VMHLKATRKKTGFQAVRRTVRCP*WPTWRG Trigger: TCCTCTCCATGTTGGCCATCACGGACATCTTACTGT...CCTCCTGACTGCCTGGAAGCCAGTCTTTTTCCTAGTGGCCTTTAGATGCATGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGCTATTCTCAAACCAAGAACAACCCTGCTGCCTTAGCTTCCTCAGTGCTCCTTGGGCACAGTTGTaGTGGACAGTAAGATGTCCG | + |
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Preference number: 4 (lower is better) Translates to: AKLFSNQEQPCCLSFLSAPWAQL*WTVRCP Trigger: CGGACATCTTACTGTCCACCACAACTGTGCCCAAGG...AGCACTGAGGAAGCTAAGGCAGCAGGGTTGTTCTTGGTTTGAGAATAGCTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCCAGGGAGAAGGAAGCAAAAGACAATCTTCTCTGTCCAGGAGATCTGTGAGCGGTCAAAGGCCATaGCTAACAAGATGGCCGACT | + |
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Preference number: 4 (lower is better) Translates to: QSQGEGSKRQSSLSRRSVSGQRP*LTRWPT Trigger: AGTCGGCCATCTTGTTAGCCATGGCCTTTGACCGCT...CACAGATCTCCTGGACAGAGAAGATTGTCTTTTGCTTCCTTCTCCCTGGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | CCTGCCTATCTCTGCCTCCCAAGTGCTGAGACTAAAGGTGTGCGCTACCACCACTTTCTCCCAAAGCGATaGGTCAGTAAAGTAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PAYLCLPSAETKGVRYHHFLPKR*VSKVKK Trigger: CTTCTTTACTTTACTGACCCATCGCTTTGGGAGAAA...GTGGTGGTAGCGCACACCTTTAGTCTCAGCACTTGGGAGGCAGAGATAGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTCCATCATCATCAAGTTGGGAGCAAGCAGTATCCAGGCAGGCATGGCGGGGGTTCAGCATTGGTaGTACCACCACATAAAGATT | + |
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Preference number: 4 (lower is better) Translates to: VQSIIIKLGASSIQAGMAGVQHW*YHHIKI Trigger: AATCTTTATGTGGTGGTACCACCAATGCTGAACCCC...CGCCATGCCTGCCTGGATACTGCTTGCTCCCAACTTGATGATGATGGACTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR TCA 90 bp | GCAAAAGACAATCTTCTCTGTCCAGGAGATCTGTGCTCCTTGGTGAAGCTGAATACACTGCTCGGAGAATaGGCGAGTACGACACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: AKDNLLCPGDLCSLVKLNTLLGE*ASTTQQ Trigger: TTGCTGTGTCGTACTCGCTCATTCTCCGAGCAGTGT...ATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTGTCTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGCTATTCTCAAACCAAGAACAACCCTGCTGCCTTAGCTTCCTCAGTGCTAATGGGGTTCAGCATTaGTGGTACCACCACATAAAG | + |
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Preference number: 4 (lower is better) Translates to: AKLFSNQEQPCCLSFLSANGVQH*WYHHIK Trigger: CTTTATGTGGTGGTACCACCAATGCTGAACCCCATT...AGCACTGAGGAAGCTAAGGCAGCAGGGTTGTTCTTGGTTTGAGAATAGCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | CACCATGACCAGGGCAACTCTTATAAAGGAAAACATTTAATTGGGGCTGGTTTACCATGGCTAACAAGATaGCCGACTCCCCCACGAACA | + |
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Preference number: 4 (lower is better) Translates to: HHDQGNSYKGKHLIGAGLPWLTR*PTPPRT Trigger: TGTTCGTGGGGGAGTCGGCCATCTTGTTAGCCATGG...TAAACCAGCCCCAATTAAATGTTTTCCTTTATAAGAGTTGCCCTGGTCATGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | GCAAAAGACAATCTTCTCTGTCCAGGAGATCTGTGCTCCTTGGTGAAGCTGAATCAATCCTCCCAACTGTaGACCATGTTAGCACTGTTG | + |
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Preference number: 4 (lower is better) Translates to: AKDNLLCPGDLCSLVKLNQSSQL*TMLALL Trigger: CAACAGTGCTAACATGGTCCACAGTTGGGAGGATTG...ATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTGTCTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | CATGACCAGGGCAACTCTTATAAAGGAAAACATTTAATTGGGGCTGGTTTACAGTTGTGCCGAGCATCCTaGGAGGGCAAGCGAAACACT | + |
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Preference number: 4 (lower is better) Translates to: HDQGNSYKGKHLIGAGLQLCRAS*EGKRNT Trigger: AGTGTTTCGCTTGCCCTCCCAGGATGCTCGGCACAA...CTGTAAACCAGCCCCAATTAAATGTTTTCCTTTATAAGAGTTGCCCTGGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | CAATCTTCTCTGTCCAGGAGATCTGTGCTCCTTGGTGAAGCTGAATATAAAGATGCAATGTTGTGGGCATaGAGCCAAAAGATGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QSSLSRRSVLLGEAEYKDAMLWA*SQKMVR Trigger: CCTCACCATCTTTTGGCTCCATGCCCACAACATTGC...ATCTTTATATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | GCAAAAGACAATCTTCTCTGTCCAGGAGATCTGTGCTCCTTGGTGAAGCTGAATTGGACAAAGAAGACTTaGGTGACACAGGCATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: AKDNLLCPGDLCSLVKLNWTKKT*VTQASK Trigger: CTTTGATGCCTGTGTCACCCAAGTCTTCTTTGTCCA...ATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTGTCTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| 3UTR CAA 72 bp | AAAGACAATCTTCTCTGTCCAGGAGATCTGTGCTCCTaGGTGAAGCTGAATATAAAGATTGACAGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: KDNLLCPGDLCS*VKLNIKIDRDQ Trigger: CTGGTCCCTGTCAATCTTTATATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | GACCAGGGCAACTCTTATAAAGGAAAACATTTAATTGGGGCTGGTTTACAGGTTCCCACGAACATTGTGTaGACAAAGAAGACTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: DQGNSYKGKHLIGAGLQVPTNIV*TKKTWV Trigger: CACCCAAGTCTTCTTTGTCCACACAATGTTCGTGGG...AACCTGTAAACCAGCCCCAATTAAATGTTTTCCTTTATAAGAGTTGCCCTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | TTCTGGTTACAAAGAAATGAGCAACTTACTACTACTAATTCTGCACATGTAGAGATGTCCAAGAACCAGTaGACCACACCCTCCCGGATC | + |
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Preference number: 4 (lower is better) Translates to: FWLQRNEQLTTTNSAHVEMSKNQ*TTPSRI Trigger: GATCCGGGAGGGTGTGGTCCACTGGTTCTTGGACAT...CTCTACATGTGCAGAATTAGTAGTAGTAAGTTGCTCATTTCTTTGTAACCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | CATGACCAGGGCAACTCTTATAAAGGAAAACATTTAATTGGGGCTGGTTTACAGTCAAAGGCAATGTTGTaGGCATGGAGCCAAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: HDQGNSYKGKHLIGAGLQSKAML*AWSQKM Trigger: CATCTTTTGGCTCCATGCCCACAACATTGCCTTTGA...CTGTAAACCAGCCCCAATTAAATGTTTTCCTTTATAAGAGTTGCCCTGGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CCA 90 bp | CAATCTTCTCTGTCCAGGAGATCTGTGCTCCTTGGTGAAGCTGAATATAAAGATTGTTGCATATCTCAGTaGGGCACAGATGGCTATAAA | + |
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Preference number: 4 (lower is better) Translates to: QSSLSRRSVLLGEAEYKDCCISQ*GTDGYK Trigger: TTTATAGCCATCTGTGCCCCACTGAGATATGCAACA...ATCTTTATATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CAA 90 bp | GTCATGCATCTAAAGGCCACTAGGAAAAAGACTGGCTTCCAGGCAGTCAGGAGGAAGATGGTGAGGGCCTaGGGCACAGTTGTGGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: VMHLKATRKKTGFQAVRRKMVRA*GTVVVD Trigger: GTCCACCACAACTGTGCCCAAGGCCCTCACCATCTT...CCTCCTGACTGCCTGGAAGCCAGTCTTTTTCCTAGTGGCCTTTAGATGCATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CAA 90 bp | CCTGCCTATCTCTGCCTCCCAAGTGCTGAGACTAAAGGTGTGCGCTACCACCACGTGGACAAAGAAGACTaGGGTGACACAGGCATCAAA | + |
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Preference number: 5 (lower is better) Translates to: PAYLCLPSAETKGVRYHHVDKED*GDTGIK Trigger: TTTGATGCCTGTGTCACCCAAGTCTTCTTTGTCCAC...GTGGTGGTAGCGCACACCTTTAGTCTCAGCACTTGGGAGGCAGAGATAGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS CCA 90 bp | AAGGCCATGGCTAACAAGATGGCCGACTCCCCCACGAACATTGTGTaGACAAAGAAGACTTGGGTGACACAGGCATCAAAGGCAATGTTG | + |
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Preference number: 5 (lower is better) Translates to: KAMANKMADSPTNIV*TKKTWVTQASKAML Trigger: CAACATTGCCTTTGATGCCTGTGTCACCCAAGTCTTCTTTGTCCACACAATGTTCGTGGGGGAGTCGGCCATCTTGTTAGCCATGGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057528.2 ENSMUST00000213290.2 |
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| CDS-3UTR CAA 90 bp | GCAAAAGACAATCTTCTCTGTCCAGGAGATCTGTGCTCCTTGGTGAAGCTGAATACCATGTTAGCACTGTaGCATATCTCAGTGGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: AKDNLLCPGDLCSLVKLNTMLAL*HISVGH Trigger: GTGCCCCACTGAGATATGCAACAGTGCTAACATGGT...ATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTGTCTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CAA 90 bp | CAATCTTCTCTGTCCAGGAGATCTGTGCTCCTTGGTGAAGCTGAATATAAAGATACTCCCCCACGAACATaGTGTGGACAAAGAAGACTT | + |
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Preference number: 5 (lower is better) Translates to: QSSLSRRSVLLGEAEYKDTPPRT*CGQRRL Trigger: AAGTCTTCTTTGTCCACACAATGTTCGTGGGGGAGT...ATCTTTATATTCAGCTTCACCAAGGAGCACAGATCTCCTGGACAGAGAAGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS-3UTR CAA 90 bp | TTCTGGTTACAAAGAAATGAGCAACTTACTACTACTAATTCTGCACATGTAGAGCAATGGGGTTCAGCATaGGTGGTACCACCACATAAA | + |
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Preference number: 5 (lower is better) Translates to: FWLQRNEQLTTTNSAHVEQWGSA*VVPPHK Trigger: TTTATGTGGTGGTACCACCAATGCTGAACCCCATTG...CTCTACATGTGCAGAATTAGTAGTAGTAAGTTGCTCATTTCTTTGTAACCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213290.2 |
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| CDS CAA 72 bp | CGACTCCCCCACGAACATTGTGTGGACAAAGAAGACTaGGGTGACACAGGCATCAAAGGCAATGTTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RLPHEHCVDKED*GDTGIKGNVVG Trigger: GCCCACAACATTGCCTTTGATGCCTGTGTCACCCAAGTCTTCTTTGTCCACACAATGTTCGTGGGGGAGTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057528.2 ENSMUST00000213290.2 |
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| CDS TCA 72 bp | CCCCCACGAACATTGTGTGGACAAAGAAGACTTGGGTaGCACAGGCATCAAAGGCAATGTTGTGGGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: PPRTLCGQRRLG*HRHQRQCCGHG Trigger: TCCATGCCCACAACATTGCCTTTGATGCCTGTGTCACCCAAGTCTTCTTTGTCCACACAATGTTCGTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057528.2 ENSMUST00000213290.2 |
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| CDS CCA 72 bp | GACTCCCCCACGAACATTGTGTGGACAAAGAAGACTTaGGTGACACAGGCATCAAAGGCAATGTTGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: DSPTNIVWTKKT*VTQASKAMLWA Trigger: TGCCCACAACATTGCCTTTGATGCCTGTGTCACCCAAGTCTTCTTTGTCCACACAATGTTCGTGGGGGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057528.2 ENSMUST00000213290.2 |
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| CDS CCA 72 bp | GCTAACAAGATGGCCGACTCCCCCACGAACATTGTGTaGACAAAGAAGACTTGGGTGACACAGGCATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ANKMADSPTNIV*TKKTWVTQASK Trigger: CTTTGATGCCTGTGTCACCCAAGTCTTCTTTGTCCACACAATGTTCGTGGGGGAGTCGGCCATCTTGTTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057528.2 ENSMUST00000213290.2 |
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| CDS CCA 72 bp | GAAGAACAACACAGAGTCTTGATGTCCAAGAACCAGTaGACCACACCCTCCCGGATCTGTTTAGTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: EEQHRVLMSKNQ*TTPSRICLVFT Trigger: AGTGAAGACTAAACAGATCCGGGAGGGTGTGGTCCACTGGTTCTTGGACATCAAGACTCTGTGTTGTTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057528.2 ENSMUST00000213290.2 |
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