Pregenerated sensors for OLFR690 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050266Ensembl transcript IDs: ENSMUST00000061920.5, ENSMUST00000211006.3, ENSMUST00000216230.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGCTGAACAGGCAGGCATaGGAGAGAAGAGAGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMLNRQA*ERREAS Trigger: AGAGGCCTCTCTTCTCTCTCATGCCTGCCTGTTCAG...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR CAA 90 bp | TTCATTCTAGTACTCATTTGCTTTCTGCAACAGACAACATGGTTCTaGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: FILVLICFLQQTTWF*NKGTHWQVLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGAAAGCAAATGAGTACTAGAATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCACTCCAACATATTCACCTATTTTCATATTTGCTGGAGCTATGTGGTGACGTACTCATTTGCTTTCTaGAACAGACAACATGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RHSNIFTYFHICWSYVVTYSFAF*NRQHGS Trigger: AGAACCATGTTGTCTGTTGCAGAAAGCAAATGAGTA...CGTCACCACATAGCTCCAGCAAATATGAAAATAGGTGAATATGTTGGAGTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGCATTCTAGTACTCATTaGCTTTCTGCAACAGACAAC | + |
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Preference number: 3 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMHSSTH*LSATDN Trigger: GTTGTCTGTTGCAGAAAGCAAATGAGTACTAGAATG...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR CCA 72 bp | CAACAGACAACATGGTTCTTGAACAAAGGAACTCACTaGCAAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: QQTTWFLNKGTH*QVLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR TCA 72 bp | TACTCATTTGCTTTCTGCAACAGACAACATGGTTCTTaGACAAAGGAACTCACTGGCAAGTTCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: YSFAFCNRQHGS*TKELTGKFSLS Trigger: AGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGAAAGCAAATGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR TCA 72 bp | CATGGCTCACAATCAAAATGTAATAGACCCAGGATTTaGATCCATGTATATTTCATTCTAGTACTCATTTGC | + |
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Preference number: 3 (lower is better) Translates to: HGSQSKCNRPRI*IHVYFILVLIC Trigger: GCAAATGAGTACTAGAATGAAATATACATGGATTCAAATCCTGGGTCTATTACATTTTGATTGTGAGCCATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGATAGAAAGCCAGGTGTaGTACTGCTCCAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMIESQV*YCSSPG Trigger: CCCAGGGCTGGAGCAGTACCACACCTGGCTTTCTAT...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGATCGGTCAAATGCCATaGCCAGAAGGATTCCCGACT | + |
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Preference number: 4 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMIGQMP*PEGFPT Trigger: AGTCGGGAATCCTTCTGGCCATGGCATTTGACCGAT...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGACAGGAGAATATCAGTaGCAGCCAGCATGGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMTGEYQ*QPAWTE Trigger: TTCTGTCCATGCTGGCTGGCACTGATATTCTCCTGT...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGTTTGCCAGAAGAATGTaGACATGGTGGGGGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMFARRM*TWWGMF Trigger: GAACATCCCCCACCATGTGCACATTCTTCTGGCAAA...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCATAGAAAGCCAGGTGTaGTACTGCTCCAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNKGTHWQVLSLSLSLSLIESQV*YCSSPG Trigger: CCCAGGGCTGGAGCAGTACCACACCTGGCTTTCTAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGCAGCACAAGCCAATCTaGCTACACCAATATGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMQHKPI*LHQYAH Trigger: GTGAGCATATTGGTGTAGCCAGATTGGCTTGTGCTG...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGTCCGTTCCCCAAGACTaGAGCAATGTACATAAGACA | + |
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Preference number: 4 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMSVPQD*SNVHKT Trigger: TGTCTTATGTACATTGCTGCAGTCTTGGGGAACGGA...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGCTGGCTACACCAATATaGTCACAATATGAGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMLATPI*SQYECG Trigger: CCCACACTCATATTGTGAGCATATTGGTGTAGCCAG...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTCCGTCCCCAGATaGCCAGGGTCATTTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LNKGTHWQVLSLSLSLSLCSVPR*PGSFFQ Trigger: TTGGAAAAATGACCCTGGCCATCTGGGGACGGAGCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR TCA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTAGGCACAGTGGTGGTTaGCAGGAGAATATCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATDNMVLEQRNSLASSLSRHSGG*QENISA Trigger: GGCACTGATATTCTCCTGTCAACCACCACTGTGCCT...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR TCA 90 bp | TCTGCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCAGGCACAGTGGTGGTTaGCAGGAGAATATCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SATDNMVLEQRNSLASSLRHSGG*QENISA Trigger: GGCACTGATATTCTCCTGTCAACCACCACTGTGCCT...GAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR TCA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGCAAAAGCAACGTGGATaGAAAACATCTGAGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMQKQRG*KTSEQC Trigger: GCATTGCTCAGATGTTTTTCATCCACGTTGCTTTTG...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | ATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCTCTCTCTCTCTACATACATGGGCTCATaGAGGGTGCGTTCACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVLEQRNSLASSLSLSLSTYMGS*RVRSLR Trigger: CCTGAGTGAACGCACCCTCCATGAGCCCATGTATGT...AGAGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TCTGCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTGCTCCGTCCCCAGATaGCCAGGGTCATTTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SATDNMVLEQRNSLASSLCSVPR*PGSFFQ Trigger: TTGGAAAAATGACCCTGGCCATCTGGGGACGGAGCA...GAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | AGGCACTCCAACATATTCACCTATTTTCATATTTGCTGGAGCTATGTGGTGACGGGAAAATTGTCCCAATaGTCCGTCCCCAGATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RHSNIFTYFHICWSYVVTGKLSQ*SVPRWP Trigger: TGGCCATCTGGGGACGGAGCATTGGGACAATTTTCC...CGTCACCACATAGCTCCAGCAAATATGAAAATAGGTGAATATGTTGGAGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | ATAACTGAGTTTGTCAGATTTAAAGCCGGACAATTGATGAGGAGGGGGAAACTCACATACATGGGCTCATaGAGGGTGCGTTCACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ITEFVRFKAGQLMRRGKLTYMGS*RVRSLR Trigger: CCTGAGTGAACGCACCCTCCATGAGCCCATGTATGT...GAGTTTCCCCCTCCTCATCAATTGTCCGGCTTTAAATCTGACAAACTCAGTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTGGGATCTCCCCAGCATaGAACCAAAAGATAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ATDNMVLEQRNSLASSLSGISPA*NQKIAK Trigger: CTTGGCTATCTTTTGGTTCCATGCTGGGGAGATCCC...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TCTGCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCATCGGTCAAATGCCATaGCCAGAAGGATTCCCGACT | + |
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Preference number: 4 (lower is better) Translates to: SATDNMVLEQRNSLASSLIGQMP*PEGFPT Trigger: AGTCGGGAATCCTTCTGGCCATGGCATTTGACCGAT...GAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGCACAAGCCAATCTaGCTACACCAATATGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LNKGTHWQVLSLSLSLSLQHKPI*LHQYAH Trigger: GTGAGCATATTGGTGTAGCCAGATTGGCTTGTGCTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR TCA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTATTGGTCCTGCAGTATaGCAGCCTCTTCAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: ATDNMVLEQRNSLASSLSIGPAV*QPLQQK Trigger: TTTCTGCTGAAGAGGCTGTCATACTGCAGGACCAAT...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTACAGGAGAATATCAGTaGCAGCCAGCATGGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: ATDNMVLEQRNSLASSLSTGEYQ*QPAWTE Trigger: TTCTGTCCATGCTGGCTGGCACTGATATTCTCCTGT...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCACATATCGGTCAAATaGCATGGCCAGAAGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: ATDNMVLEQRNSLASSLSHISVK*HGQKDS Trigger: GGAATCCTTCTGGCCATGGCATTTGACCGATATGTG...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | TTCATGCATTCAGCTCAGATACTGACCCACTTGCTAGATGAAGAAGTGGATATTGGAAAATTGTCCCAATaGTCCGTCCCCAGATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FMHSAQILTHLLDEEVDIGKLSQ*SVPRWP Trigger: TGGCCATCTGGGGACGGAGCATTGGGACAATTTTCC...AATATCCACTTCTTCATCTAGCAAGTGGGTCAGTATCTGAGCTGAATGCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTTTTGCCAGAAGAATGTaGACATGGTGGGGGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: ATDNMVLEQRNSLASSLSFARRM*TWWGMF Trigger: GAACATCCCCCACCATGTGCACATTCTTCTGGCAAA...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | ATAACTGAGTTTGTCAGATTTAAAGCCGGACAATTGATGAGGAGGGGGAAACTCGGGATCTCCCCAGCATaGAACCAAAAGATAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ITEFVRFKAGQLMRRGKLGISPA*NQKIAK Trigger: CTTGGCTATCTTTTGGTTCCATGCTGGGGAGATCCC...GAGTTTCCCCCTCCTCATCAATTGTCCGGCTTTAAATCTGACAAACTCAGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TCTGCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCAGAATGTGCACATGGTaGGGGATGTTCTTGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SATDNMVLEQRNSLASSLRMCTW*GMFLPK Trigger: CTTTGGCAAGAACATCCCCCACCATGTGCACATTCT...GAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR TCA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTAACATCTACCAAAACTaGAGCCATTGGCACCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: ATDNMVLEQRNSLASSLSNIYQN*SHWHRE Trigger: TTCTCGGTGCCAATGGCTTCAGTTTTGGTAGATGTT...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | TTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAACATCTGAGCAATaGAGGCATCAAAGGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: LNKGTHWQVLSLSLSLSLKTSEQ*RHQRGS Trigger: AGATCCCCTTTGATGCCTGCATTGCTCAGATGTTTT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | AGGCACTCCAACATATTCACCTATTTTCATATTTGCTGGAGCTATGTGGTGACGCACATATCGGTCAAATaGCATGGCCAGAAGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: RHSNIFTYFHICWSYVVTHISVK*HGQKDS Trigger: GGAATCCTTCTGGCCATGGCATTTGACCGATATGTG...CGTCACCACATAGCTCCAGCAAATATGAAAATAGGTGAATATGTTGGAGTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTTTGTGCCTAGCATCCTaGGAAGGAAGTCTAAACACA | + |
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Preference number: 4 (lower is better) Translates to: ATDNMVLEQRNSLASSLSLCLAS*EGSLNT Trigger: TGTGTTTAGACTTCCTTCCCAGGATGCTAGGCACAA...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | CTTTCTGCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTAGAATGTGCACATGGTaGGGGATGTTCTTGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSATDNMVLEQRNSLASSRMCTW*GMFLPK Trigger: CTTTGGCAAGAACATCCCCCACCATGTGCACATTCT...AGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR CAA 72 bp | TTCAAGGCACTCCAACATATTCACCTATTTTCATATTaGCTGGAGCTATGTGGTGACGGCAGCCATGATGCT | + |
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Preference number: 4 (lower is better) Translates to: FKALQHIHLFSY*LELCGDGSHDA Trigger: AGCATCATGGCTGCCGTCACCACATAGCTCCAGCAAATATGAAAATAGGTGAATATGTTGGAGTGCCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR TCA 90 bp | CTTTCTGCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTAACATCTACCAAAACTaGAGCCATTGGCACCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LSATDNMVLEQRNSLASSNIYQN*SHWHRE Trigger: TTCTCGGTGCCAATGGCTTCAGTTTTGGTAGATGTT...AGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | ATAACTGAGTTTGTCAGATTTAAAGCCGGACAATTGATGAGGAGGGGGAAACTCTCCGTTCCCCAAGACTaGAGCAATGTACATAAGACA | + |
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Preference number: 4 (lower is better) Translates to: ITEFVRFKAGQLMRRGKLSVPQD*SNVHKT Trigger: TGTCTTATGTACATTGCTGCAGTCTTGGGGAACGGA...GAGTTTCCCCCTCCTCATCAATTGTCCGGCTTTAAATCTGACAAACTCAGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR GCA 90 bp | CTTTCTGCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTGGCTACACCAATATaGTCACAATATGAGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LSATDNMVLEQRNSLASSLATPI*SQYECG Trigger: CCCACACTCATATTGTGAGCATATTGGTGTAGCCAG...AGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGGATGAACACAGTTaGATGGATGATAGTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LNKGTHWQVLSLSLSLSLQDEHS*MDDSEV Trigger: AACTTCACTATCATCCATCCAACTGTGTTCATCCTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | AGGCACTCCAACATATTCACCTATTTTCATATTTGCTGGAGCTATGTGGTGACGTTGTGCCTAGCATCCTaGGAAGGAAGTCTAAACACA | + |
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Preference number: 4 (lower is better) Translates to: RHSNIFTYFHICWSYVVTLCLAS*EGSLNT Trigger: TGTGTTTAGACTTCCTTCCCAGGATGCTAGGCACAA...CGTCACCACATAGCTCCAGCAAATATGAAAATAGGTGAATATGTTGGAGTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR CAA 72 bp | GTACTCATTTGCTTTCTGCAACAGACAACATGGTTCTaGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VLICFLQQTTWF*NKGTHWQVLSL Trigger: GAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGAAAGCAAATGAGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR TCA 90 bp | ATAACTGAGTTTGTCAGATTTAAAGCCGGACAATTGATGAGGAGGGGGAAACTCCAAAAGCAACGTGGATaGAAAACATCTGAGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: ITEFVRFKAGQLMRRGKLQKQRG*KTSEQC Trigger: GCATTGCTCAGATGTTTTTCATCCACGTTGCTTTTG...GAGTTTCCCCCTCCTCATCAATTGTCCGGCTTTAAATCTGACAAACTCAGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | CTTTCTGCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTATGAACACAGTTGGATaGATGATAGTGAAGTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: LSATDNMVLEQRNSLASSMNTVG*MIVKLV Trigger: AACTAACTTCACTATCATCCATCCAACTGTGTTCAT...AGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGCAGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CCA 90 bp | TTCATGCATTCAGCTCAGATACTGACCCACTTGCTAGATGAAGAAGTGGATATTATGAACACAGTTGGATaGATGATAGTGAAGTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: FMHSAQILTHLLDEEVDIMNTVG*MIVKLV Trigger: AACTAACTTCACTATCATCCATCCAACTGTGTTCAT...AATATCCACTTCTTCATCTAGCAAGTGGGTCAGTATCTGAGCTGAATGCATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| 3UTR CAA 72 bp | ATGTTTCAAGTTAGAATTACAGCTATGGAGAACCTATaGTACCCAGTGGTTCATATGCTCAAATTAATCCTC | + |
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Preference number: 4 (lower is better) Translates to: MFQVRITAMENL*YPVVHMLKLIL Trigger: GAGGATTAATTTGAGCATATGAACCACTGGGTACAATAGGTTCTCCATAGCTGTAATTCTAACTTGAAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CAA 90 bp | TGCTGGAGCTATGTGGTGACGGCAGCCATGATGCTGGATAAGATGATGGTCATGCCAAAACTGAAGCCATaGGCACCGAGAAGCCATACC | + |
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Preference number: 5 (lower is better) Translates to: CWSYVVTAAMMLDKMMVMPKLKP*APRSHT Trigger: GGTATGGCTTCTCGGTGCCAATGGCTTCAGTTTTGG...CATGACCATCATCTTATCCAGCATCATGGCTGCCGTCACCACATAGCTCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CAA 90 bp | ATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCTCTCTCTCTCTCAGGTATTGAGGGCCTaGTGCCTAGCATCCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: MVLEQRNSLASSLSLSLSQVLRA*CLASWE Trigger: TTCCCAGGATGCTAGGCACAAGGCCCTCAATACCTG...AGAGAGAGAGAGAGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CAA 90 bp | GCAACAGACAACATGGTTCTTGAACAAAGGAACTCACTGGCAAGTTCTCTCTCTCAGGTATTGAGGGCCTaGTGCCTAGCATCCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: ATDNMVLEQRNSLASSLSQVLRA*CLASWE Trigger: TTCCCAGGATGCTAGGCACAAGGCCCTCAATACCTG...AGAGAGAGAACTTGCCAGTGAGTTCCTTTGTTCAAGAACCATGTTGTCTGTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS-3UTR CAA 90 bp | ATAACTGAGTTTGTCAGATTTAAAGCCGGACAATTGATGAGGAGGGGGAAACTCCCAAAACTGAAGCCATaGGCACCGAGAAGCCATACC | + |
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Preference number: 5 (lower is better) Translates to: ITEFVRFKAGQLMRRGKLPKLKP*APRSHT Trigger: GGTATGGCTTCTCGGTGCCAATGGCTTCAGTTTTGG...GAGTTTCCCCCTCCTCATCAATTGTCCGGCTTTAAATCTGACAAACTCAGTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS TCA 72 bp | GCTCATGGAGGGTGCGTTCACTCAGGACAACAAGGATaGGGGCTCCGTTCCCCAAGACTGCAGCAATGTACA | + |
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Preference number: 6 (lower is better) Translates to: AHGGCVHSGQQG*GLRSPRLQQCT Trigger: TGTACATTGCTGCAGTCTTGGGGAACGGAGCCCTCATCCTTGTTGTCCTGAGTGAACGCACCCTCCATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061920.5 ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS TCA 72 bp | ACACAGCCTGGAGGATCAACGTATAAGAAATACCAATaGGTGCAACATCTACCAAAACTGAAGCCATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TQPGGSTYKKYQ*VQHLPKLKPLA Trigger: TGCCAATGGCTTCAGTTTTGGTAGATGTTGCACTCATTGGTATTTCTTATACGTTGATCCTCCAGGCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061920.5 ENSMUST00000211006.3 ENSMUST00000216230.2 |
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| CDS TCA 72 bp | ATAAGAAATACCAATGAGTGCAACATCTACCAAAACTaGAGCCATTGGCACCGAGAAGCCATACCAGATATT | + |
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Preference number: 6 (lower is better) Translates to: IRNTNECNIYQN*SHWHREAIPDI Trigger: AATATCTGGTATGGCTTCTCGGTGCCAATGGCTTCAGTTTTGGTAGATGTTGCACTCATTGGTATTTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061920.5 ENSMUST00000211006.3 ENSMUST00000216230.2 |
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