Pregenerated sensors for OLFR689 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073907Ensembl transcript IDs: ENSMUST00000098153.3, ENSMUST00000215413.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTCCAGTGGTGGGACTGGGACACCAACCCAGATACAAAATTTTTaGCTTACCACCTGCCCTGATTGGGTTGGGAGGTGCTGGGATAAT | + |
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Preference number: 1 (lower is better) Translates to: ASSGGTGTPTQIQNF*LTTCPDWVGRCWDN Trigger: ATTATCCCAGCACCTCCCAACCCAATCAGGGCAGGTGGTAAGCCAAAAATTTTGTATCTGGGTTGGTGTCCCAGTCCCACCACTGGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 90 bp | AACCAGCCATCTTCTGTAACCAGGCAAGGCTTCCAGTGGTGGGACTaGGACACCAACCCAGATACAAAATTTTTGGCTTACCACCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: NQPSSVTRQGFQWWD*DTNPDTKFLAYHLP Trigger: GGGCAGGTGGTAAGCCAAAAATTTTGTATCTGGGTTGGTGTCCCAGTCCCACCACTGGAAGCCTTGCCTGGTTACAGAAGATGGCTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 90 bp | CAGAGACTGAACCAGCCATCTTCTGTAACCAGGCAAGGCTTCCAGTaGTGGGACTGGGACACCAACCCAGATACAAAATTTTTGGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: QRLNQPSSVTRQGFQ*WDWDTNPDTKFLAY Trigger: GTAAGCCAAAAATTTTGTATCTGGGTTGGTGTCCCAGTCCCACCACTGGAAGCCTTGCCTGGTTACAGAAGATGGCTGGTTCAGTCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 90 bp | CCCAAAAGAGATGCCCTGTGGACTATTCCCAGGAAACCCACGGAATaGGGCTCTCTCAGACCTTTAGATTTTATAACAGAACCATGTGCC | + |
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Preference number: 1 (lower is better) Translates to: PKRDALWTIPRKPTE*GSLRPLDFITEPCA Trigger: GGCACATGGTTCTGTTATAAAATCTAAAGGTCTGAGAGAGCCCCATTCCGTGGGTTTCCTGGGAATAGTCCACAGGGCATCTCTTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR GCA 90 bp | ATACAAAATTTTTGGCTTACCACCTGCCCTGATTGGGTTGGGAGGTaGTGGGATAATGATGTATCAGAGCGTGTAGGAATGGCTAACCAA | + |
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Preference number: 1 (lower is better) Translates to: IQNFWLTTCPDWVGR*WDNDVSERVGMANQ Trigger: TTGGTTAGCCATTCCTACACGCTCTGATACATCATTATCCCAGCACCTCCCAACCCAATCAGGGCAGGTGGTAAGCCAAAAATTTTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR GCA 90 bp | CATAGATCAGTGTCTAGACCAATCATCATCAGAGGCACTTTCTTCTaGAGCTTGGAGCTCTATAAGCTTGGAGCAGATTTAGAGATGCTC | + |
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Preference number: 1 (lower is better) Translates to: HRSVSRPIIIRGTFF*SLELYKLGADLEML Trigger: GAGCATCTCTAAATCTGCTCCAAGCTTATAGAGCTCCAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCTAGACACTGATCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR GCA 90 bp | TTACCATTAAGTCTCGGTGGCTCCCATCTTCCTCCTTTTGATGGATaGAGAATTGATTATTCCATTGTTGCCATTCACCTCTACTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: LPLSLGGSHLPPFDG*RIDYSIVAIHLYFH Trigger: ATGGAAGTAGAGGTGAATGGCAACAATGGAATAATCAATTCTGCATCCATCAAAAGGAGGAAGATGGGAGCCACCGAGACTTAATGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR GCA 90 bp | GGGTTTCAGAGTCCAAGTGTTTGTCATGTGGTTAAACACAATTCTTaGACACTGTTCAAATGCTTTTCAGAAAGTATCTACCAGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GFQSPSVCHVVKHNS*TLFKCFSESIYQGL Trigger: CAGGCCCTGGTAGATACTTTCTGAAAAGCATTTGAACAGTGTGCAAGAATTGTGTTTAACCACATGACAAACACTTGGACTCTGAAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR TCA 90 bp | GTAGCTACATCATACACTATCGTGGGCTGTAAGAAGGAACATTTATaGAAAACTTCCAGCAGCACTTTACACATACAGTGTAAACTTGAG | + |
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Preference number: 1 (lower is better) Translates to: VATSYTIVGCKKEHL*KTSSSTLHIQCKLE Trigger: CTCAAGTTTACACTGTATGTGTAAAGTGCTGCTGGAAGTTTTTCATAAATGTTCCTTCTTACAGCCCACGATAGTGTATGATGTAGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR TCA 90 bp | TTTAGAGAAATGCACACTGTAAAATTCTGTCTTATCCACAGAGGATaGCCACGCCATCTAACTTACTTTCCTGTAGGAAGGATGATTCAA | + |
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Preference number: 1 (lower is better) Translates to: FREMHTVKFCLIHRG*PRHLTYFPVGRMIQ Trigger: TTGAATCATCCTTCCTACAGGAAAGTAAGTTAGATGGCGTGGTCATCCTCTGTGGATAAGACAGAATTTTACAGTGTGCATTTCTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 90 bp | GTTATGAGGGTTTATGCCTCATCTTATTACACCTTGTTATATATTTaGCTGATACCCCTAGGGAACTGCCATTTTCTGAAGGGAAACATT | + |
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Preference number: 1 (lower is better) Translates to: VMRVYASSYYTLLYI*LIPLGNCHFLKGNI Trigger: AATGTTTCCCTTCAGAAAATGGCAGTTCCCTAGGGGTATCAGCCAAATATATAACAAGGTGTAATAAGATGAGGCATAAACCCTCATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 90 bp | TATTTTAGTGTGTGGCAGGGTTTCAGAGTCCAAGTGTTTGTCATGTaGTTAAACACAATTCTTGCACACTGTTCAAATGCTTTTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: YFSVWQGFRVQVFVM*LNTILAHCSNAFQK Trigger: TTTCTGAAAAGCATTTGAACAGTGTGCAAGAATTGTGTTTAACCACATGACAAACACTTGGACTCTGAAACCCTGCCACACACTAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 90 bp | ATTATTGGCACGGTTGTTCTTTTCCCAGAATCTATCATAATGCCATaGTATTGTGTCAGGAAATCTATGCCTTGTCCTGATCCAATATTT | + |
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Preference number: 1 (lower is better) Translates to: IIGTVVLFPESIIMP*YCVRKSMPCPDPIF Trigger: AAATATTGGATCAGGACAAGGCATAGATTTCCTGACACAATACCATGGCATTATGATAGATTCTGGGAAAAGAACAACCGTGCCAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR GCA 90 bp | CTAGTCAAGCATCACTTTCCTATAGAACTTCTATTGTGCTTTATGTaGCAGCGAATATTGACCTCCACAGAACTTTTATATTTCACTAGA | + |
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Preference number: 1 (lower is better) Translates to: LVKHHFPIELLLCFM*QRILTSTELLYFTR Trigger: TCTAGTGAAATATAAAAGTTCTGTGGAGGTCAATATTCGCTGGCACATAAAGCACAATAGAAGTTCTATAGGAAAGTGATGCTTGACTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CAA 90 bp | GACAATGTGAGAACATGGCTCACAGAATCAACTAAACAGGGCTCTTaGGGACTCGCAGGGAAAGAAGCAGCACTCCTGGAGCCTACATGG | + |
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Preference number: 2 (lower is better) Translates to: DNVRTWLTESTKQGS*GLAGKEAALLEPTW Trigger: CCATGTAGGCTCCAGGAGTGCTGCTTCTTTCCCTGCGAGTCCCAAAGAGCCCTGTTTAGTTGATTCTGTGAGCCATGTTCTCACATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR GCA 90 bp | AGGATACAGAGACTGAACCAGCCATCTTCTGTAACCAGGCAAGGCTTCCAGTGGATACCCCTAGGGAACTaGCATTTTCTGAAGGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: RIQRLNQPSSVTRQGFQWIPLGN*HFLKGN Trigger: GTTTCCCTTCAGAAAATGGCAGTTCCCTAGGGGTAT...CCACTGGAAGCCTTGCCTGGTTACAGAAGATGGCTGGTTCAGTCTCTGTATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTGTGGACTATTCCCAGGAAACCCACGGAATGGGGCTCTCTCAGACCTTTATCTATGCCTTGTCCTaGTCCAATATTTCATCTTTG | + |
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Preference number: 2 (lower is better) Translates to: CPVDYSQETHGMGLSQTFIYALS*SNISSL Trigger: CAAAGATGAAATATTGGATCAGGACAAGGCATAGAT...AAAGGTCTGAGAGAGCCCCATTCCGTGGGTTTCCTGGGAATAGTCCACAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATACAGAGACTGAACCAGCCATCTTCTGTAACCAGGCAAGGCTTCCAGTGGCCTAACAGTGGGAATTaGGGTTATCTTTGGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RIQRLNQPSSVTRQGFQWPNSGN*GYLWLF Trigger: AAAGAGCCAAAGATAACCCCAATTCCCACTGTTAGG...CCACTGGAAGCCTTGCCTGGTTACAGAAGATGGCTGGTTCAGTCTCTGTATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGATCAGTGTCTAGACCAATCATCATCAGAGGCACTTTCTTCTGCAGCTTGCTGTGCACCACTATGTaGGTGTTGGGAATCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: HRSVSRPIIIRGTFFCSLLCTTM*VLGIKL Trigger: GAGTTTGATTCCCAACACCCACATAGTGGTGCACAG...CAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCTAGACACTGATCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATACAGAGACTGAACCAGCCATCTTCTGTAACCAGGCAAGGCTTCCAGTGGCTGCTTAACTGTCAGTaGTCTAAACTTCTCACATTT | + |
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Preference number: 2 (lower is better) Translates to: RIQRLNQPSSVTRQGFQWLLNCQ*SKLLTF Trigger: AAATGTGAGAAGTTTAGACCACTGACAGTTAAGCAG...CCACTGGAAGCCTTGCCTGGTTACAGAAGATGGCTGGTTCAGTCTCTGTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CAA 90 bp | TCAGTGTCTAGACCAATCATCATCAGAGGCACTTTCTTCTGCAGCTaGGAGCTCTATAAGCTTGGAGCAGATTTAGAGATGCTCAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SVSRPIIIRGTFFCS*ELYKLGADLEMLSQ Trigger: TTGACTGAGCATCTCTAAATCTGCTCCAAGCTTATAGAGCTCCAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCTAGACACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGATCAGTGTCTAGACCAATCATCATCAGAGGCACTTTCTTCTGCAGCTTGCAGAGACCATGGCTATaGCCAGATTTTCATCATCTA | + |
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Preference number: 2 (lower is better) Translates to: HRSVSRPIIIRGTFFCSLQRPWL*PDFHHL Trigger: TAGATGATGAAAATCTGGGCATAGCCATGGTCTCTG...CAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCTAGACACTGATCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | AATTCTTGCACACTGTTCAAATGCTTTTCAGAAAGTATCTACCAGGGCCTGATTACCATTAAGTCTCGGTaGCTCCCATCTTCCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: NSCTLFKCFSESIYQGLITIKSR*LPSSSF Trigger: AAAGGAGGAAGATGGGAGCCACCGAGACTTAATGGT...AATCAGGCCCTGGTAGATACTTTCTGAAAAGCATTTGAACAGTGTGCAAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGATCAGTGTCTAGACCAATCATCATCAGAGGCACTTTCTTCTGCAGCTTGACCTTGTTATATATTTaGCTGATACCCCTAGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: HRSVSRPIIIRGTFFCSLTLLYI*LIPLGN Trigger: GTTCCCTAGGGGTATCAGCCAAATATATAACAAGGT...CAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCTAGACACTGATCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CAA 90 bp | GGAAGTACTATAGTTTACAGTGATGGAGAATTGCTTCTGGTTTCTTaGTTTTCCTCAAGAACTGACGAACCCTTATCTGGAACCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: GSTIVYSDGELLLVS*FSSRTDEPLSGTRD Trigger: GTCTCTGGTTCCAGATAAGGGTTCGTCAGTTCTTGAGGAAAACAAAGAAACCAGAAGCAATTCTCCATCACTGTAAACTATAGTACTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR TCA 90 bp | GCTATTTCATTAATTAATAGGCTAAGAGTCTCACTGCTCCTCTTAGCATTAGACCCCTCCTTTCTGGAATaGGCATGTTTGTTCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: AISLINRLRVSLLLLALDPSFLE*ACLFST Trigger: GGTAGAGAACAAACATGCTCATTCCAGAAAGGAGGG...GTCTAATGCTAAGAGGAGCAGTGAGACTCTTAGCCTATTAATTAATGAAATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAGTCAAGCATCACTTTCCTATAGAACTTCTATTGTGCTTTATGTGCCAGTTGGGAATCAAACTCTaGTCCTCTACAAGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: VLVKHHFPIELLLCFMCQLGIKL*SSTRAT Trigger: TGTTGCCCTTGTAGAGGACCAGAGTTTGATTCCCAA...CTGGCACATAAAGCACAATAGAAGTTCTATAGGAAAGTGATGCTTGACTAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGATCAGTGTCTAGACCAATCATCATCAGAGGCACTTTCTTCTGCAGCTTGTGCACACTGTTCAAATaGTTTTCAGAAAGTATCTAC | + |
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Preference number: 2 (lower is better) Translates to: HRSVSRPIIIRGTFFCSLCTLFK*FSESIY Trigger: GTAGATACTTTCTGAAAAGCATTTGAACAGTGTGCA...CAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCTAGACACTGATCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CAA 90 bp | TCCTTTAGAGGACTTGGAAGTACTATAGTTTACAGTGATGGAGAATaGCTTCTGGTTTCTTTGTTTTCCTCAAGAACTGACGAACCCTTA | + |
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Preference number: 2 (lower is better) Translates to: SFRGLGSTIVYSDGE*LLVSLFSSRTDEPL Trigger: TAAGGGTTCGTCAGTTCTTGAGGAAAACAAAGAAACCAGAAGCAATTCTCCATCACTGTAAACTATAGTACTTCCAAGTCCTCTAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTGATTATTCCATTGTTGCCATTCACCTCTACTTCCATGCTCTATATGGCATGCCCCTGGAAGTTGTaGTGGAATTTTAATAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: ELIIPLLPFTSTSMLYMACPWKL*WNFNKV Trigger: TACCTTATTAAAATTCCACCACAACTTCCAGGGGCA...TGCCATATAGAGCATGGAAGTAGAGGTGAATGGCAACAATGGAATAATCAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CAA 90 bp | TTGTTCTCTGTTCTAGTCAAGCATCACTTTCCTATAGAACTTCTATaGTGCTTTATGTGCCAGCGAATATTGACCTCCACAGAACTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LFSVLVKHHFPIELL*CFMCQRILTSTELL Trigger: TAAAAGTTCTGTGGAGGTCAATATTCGCTGGCACATAAAGCACAATAGAAGTTCTATAGGAAAGTGATGCTTGACTAGAACAGAGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAGTCAAGCATCACTTTCCTATAGAACTTCTATTGTGCTTTATGTGCCAGCTCAGTCATATCATCTaGATATTCACACTCCTGATA | + |
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Preference number: 2 (lower is better) Translates to: VLVKHHFPIELLLCFMCQLSHII*IFTLLI Trigger: TATCAGGAGTGTGAATATTCAGATGATATGACTGAG...CTGGCACATAAAGCACAATAGAAGTTCTATAGGAAAGTGATGCTTGACTAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | ATGATGGACATGGAGTTTCAAGTTCATTCCTCTCTTGCTGGTTTTGATCTTTTTGATAAAACCCCCTTCTaGTTTCTCTTCATTGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: MMDMEFQVHSSLAGFDLFDKTPF*FLFIVD Trigger: GTCTACAATGAAGAGAAACCAGAAGGGGGTTTTATC...AAAAAGATCAAAACCAGCAAGAGAGGAATGAACTTGAAACTCCATGTCCATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | ATGATGGACATGGAGTTTCAAGTTCATTCCTCTCTTGCTGGTTTTGATCTTTTTAATGTCCCTCCTTTCTaGAATGAGCATGTTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: MMDMEFQVHSSLAGFDLFNVPPF*NEHVCS Trigger: AGAACAAACATGCTCATTCCAGAAAGGAGGGACATT...AAAAAGATCAAAACCAGCAAGAGAGGAATGAACTTGAAACTCCATGTCCATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTATTTGTTCTCTGTTCTAGTCAAGCATCACTTTCCTATAGAACTTCTATTGAAGAAGGAACATTTATaGAAAACTTCCAGCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: VYLFSVLVKHHFPIELLLKKEHL*KTSSST Trigger: AGTGCTGCTGGAAGTTTTTCATAAATGTTCCTTCTT...CAATAGAAGTTCTATAGGAAAGTGATGCTTGACTAGAACAGAGAACAAATAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATGTGCCAGCGAATATTGACCTCCACAGAACTTTTATATTTCACTAGAGAACAAGAGTTTGTGAACTaGAGAAAGAAACCTTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: FMCQRILTSTELLYFTREQEFVN*RKKPCS Trigger: TGAACAAGGTTTCTTTCTTCAGTTCACAAACTCTTG...TTCTCTAGTGAAATATAAAAGTTCTGTGGAGGTCAATATTCGCTGGCACATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR GCA 90 bp | ATGATGGACATGGAGTTTCAAGTTCATTCCTCTCTTGCTGGTTTTGATCTTTTTCCTCCTTTTGATGGATaGAGAATTGATTATTCCATT | + |
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Preference number: 2 (lower is better) Translates to: MMDMEFQVHSSLAGFDLFPPFDG*RIDYSI Trigger: AATGGAATAATCAATTCTGCATCCATCAAAAGGAGG...AAAAAGATCAAAACCAGCAAGAGAGGAATGAACTTGAAACTCCATGTCCATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR-3UTR CCA 90 bp | ATGATGGACATGGAGTTTCAAGTTCATTCCTCTCTTGCTGGTTTTGATCTTTTTCAAGTGTTTGTCATGTaGTTAAACACAATTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: MMDMEFQVHSSLAGFDLFQVFVM*LNTILA Trigger: TGCAAGAATTGTGTTTAACCACATGACAAACACTTG...AAAAAGATCAAAACCAGCAAGAGAGGAATGAACTTGAAACTCCATGTCCATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 72 bp | GCTCTTTGGGACTCGCAGGGAAAGAAGCAGCACTCCTaGAGCCTACATGGGTCTGCACTAGGTCCTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: ALWDSQGKKQHS*SLHGSALGPLS Trigger: ACTGAGAGGACCTAGTGCAGACCCATGTAGGCTCCAGGAGTGCTGCTTCTTTCCCTGCGAGTCCCAAAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 72 bp | CTCGCAGGGAAAGAAGCAGCACTCCTGGAGCCTACATaGGTCTGCACTAGGTCCTCTCAGTACATGTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LAGKEAALLEPT*VCTRSSQYMLW Trigger: CCACAACATGTACTGAGAGGACCTAGTGCAGACCCATGTAGGCTCCAGGAGTGCTGCTTCTTTCCCTGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 72 bp | CCAAGCCAGGAGATGAAGCCCAGGCTGAAAACTGCTTaGATGACTAGAAACCGCAAGGTAGATGGCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: PSQEMKPRLKTA*MTRNRKVDGPE Trigger: CTCTGGGCCATCTACCTTGCGGTTTCTAGTCATCCAAGCAGTTTTCAGCCTGGGCTTCATCTCCTGGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 72 bp | GGTGGGACTGGGACACCAACCCAGATACAAAATTTTTaGCTTACCACCTGCCCTGATTGGGTTGGGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: GGTGTPTQIQNF*LTTCPDWVGRC Trigger: GCACCTCCCAACCCAATCAGGGCAGGTGGTAAGCCAAAAATTTTGTATCTGGGTTGGTGTCCCAGTCCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 72 bp | TGGCTTACCACCTGCCCTGATTGGGTTGGGAGGTGCTaGGATAATGATGTATCAGAGCGTGTAGGAATGGCT | + |
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Preference number: 3 (lower is better) Translates to: WLTTCPDWVGRC*DNDVSERVGMA Trigger: AGCCATTCCTACACGCTCTGATACATCATTATCCCAGCACCTCCCAACCCAATCAGGGCAGGTGGTAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR GCA 72 bp | TTTTGGCTTACCACCTGCCCTGATTGGGTTGGGAGGTaGTGGGATAATGATGTATCAGAGCGTGTAGGAATG | + |
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Preference number: 3 (lower is better) Translates to: FWLTTCPDWVGR*WDNDVSERVGM Trigger: CATTCCTACACGCTCTGATACATCATTATCCCAGCACCTCCCAACCCAATCAGGGCAGGTGGTAAGCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 72 bp | AACCAGCCATCTTCTGTAACCAGGCAAGGCTTCCAGTaGTGGGACTGGGACACCAACCCAGATACAAAATTT | + |
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Preference number: 3 (lower is better) Translates to: NQPSSVTRQGFQ*WDWDTNPDTKF Trigger: AAATTTTGTATCTGGGTTGGTGTCCCAGTCCCACCACTGGAAGCCTTGCCTGGTTACAGAAGATGGCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 72 bp | TCTTCTGTAACCAGGCAAGGCTTCCAGTGGTGGGACTaGGACACCAACCCAGATACAAAATTTTTGGCTTAC | + |
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Preference number: 3 (lower is better) Translates to: SSVTRQGFQWWD*DTNPDTKFLAY Trigger: GTAAGCCAAAAATTTTGTATCTGGGTTGGTGTCCCAGTCCCACCACTGGAAGCCTTGCCTGGTTACAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| 3UTR CCA 72 bp | GATGCCCTGTGGACTATTCCCAGGAAACCCACGGAATaGGGCTCTCTCAGACCTTTAGATTTTATAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DALWTIPRKPTE*GSLRPLDFITE Trigger: TTCTGTTATAAAATCTAAAGGTCTGAGAGAGCCCCATTCCGTGGGTTTCCTGGGAATAGTCCACAGGGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | CTGTGCACCACTATGTGGGTGTTGGGAATCAAACTCTaGTCCTCTACAAGGGCAACAAGTACTTTTTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCTTMWVLGIKL*SSTRATSTFYH Trigger: ATGGTAAAAAGTACTTGTTGCCCTTGTAGAGGACCAGAGTTTGATTCCCAACACCCACATAGTGGTGCACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | GTAATTAAGCACAACTGTGCACCACTATGTGGGTGTTaGGAATCAAACTCTGGTCCTCTACAAGGGCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: VIKHNCAPLCGC*ESNSGPLQGQQ Trigger: TTGTTGCCCTTGTAGAGGACCAGAGTTTGATTCCCAACACCCACATAGTGGTGCACAGTTGTGCTTAATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGTTTTCCTCAAGAACTGACGAACCCTTATCTGGAACCAGAGACCATGGCAGATGCCCCTGGAAGTaGTGGTGGAATTTTAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLFSSRTDEPLSGTRDHGRCPWK*WWNFNK Trigger: CTTATTAAAATTCCACCACAACTTCCAGGGGCATCT...GCCATGGTCTCTGGTTCCAGATAAGGGTTCGTCAGTTCTTGAGGAAAACAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR GCA 72 bp | GTGTCTAGACCAATCATCATCAGAGGCACTTTCTTCTaGAGCTTGGAGCTCTATAAGCTTGGAGCAGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: VSRPIIIRGTFF*SLELYKLGADL Trigger: TAAATCTGCTCCAAGCTTATAGAGCTCCAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCTAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | TTTGTAGACCTGCAGAATCCAAGAATTGGGAAGTCATaGAGGCATCTACCCAAAGATAGACCTGAGAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: FVDLQNPRIGKS*RHLPKDRPERI Trigger: TATCCTCTCAGGTCTATCTTTGGGTAGATGCCTCCATGACTTCCCAATTCTTGGATTCTGCAGGTCTACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | GTCTCACTGCTCCTCTTAGCATTAGACCATCAGTTTTaGTTTGTAGACCTGCAGAATCCAAGAATTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSLLLLALDHQF*FVDLQNPRIGK Trigger: CTTCCCAATTCTTGGATTCTGCAGGTCTACAAACCAAAACTGATGGTCTAATGCTAAGAGGAGCAGTGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | CTCAGTCAAACATTAGGCAGAGTCCAGGTAACTCTGTaGAGGAAGAATTTTCAGATTCAGAGAGGTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSQTLGRVQVTL*RKNFQIQRGQG Trigger: TCCTTGACCTCTCTGAATCTGAAAATTCTTCCTCCACAGAGTTACCTGGACTCTGCCTAATGTTTGACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR GCA 72 bp | CTGGGTTGCCATACCCAGCCCTGTTATGAGGGTTTATaGCTCATCTTATTACACCTTGTTATATATTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGCHTQPCYEGL*LILLHLVIYLA Trigger: AGCCAAATATATAACAAGGTGTAATAAGATGAGGCATAAACCCTCATAACAGGGCTGGGTATGGCAACCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | GTGTGGCAGGGTTTCAGAGTCCAAGTGTTTGTCATGTaGTTAAACACAATTCTTGCACACTGTTCAAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: VWQGFRVQVFVM*LNTILAHCSNA Trigger: AGCATTTGAACAGTGTGCAAGAATTGTGTTTAACCACATGACAAACACTTGGACTCTGAAACCCTGCCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGTTTTCCTCAAGAACTGACGAACCCTTATCTGGAACCAGAGACCATGGCGAATTGATTATTCCATaGTTGCCATTCACCTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SLFSSRTDEPLSGTRDHGELIIP*LPFTST Trigger: AGTAGAGGTGAATGGCAACAATGGAATAATCAATTC...GCCATGGTCTCTGGTTCCAGATAAGGGTTCGTCAGTTCTTGAGGAAAACAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR TCA 72 bp | GAAGAATTTTCAGATTCAGAGAGGTCAAGGACAATGTaGGAACATGGCTCACAGAATCAACTAAACAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EEFSDSERSRTM*EHGSQNQLNRA Trigger: AGCCCTGTTTAGTTGATTCTGTGAGCCATGTTCTCACATTGTCCTTGACCTCTCTGAATCTGAAAATTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGATGGACATGGAGTTTCAAGTTCATTCCTCTCTTGCTGGTTTTGATCTTTTTACATACAGTGTAAACTaGAGTAGATGCCCCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: MMDMEFQVHSSLAGFDLFTYSVN*SRCPWK Trigger: CTTCCAGGGGCATCTACTCAAGTTTACACTGTATGT...AAAAAGATCAAAACCAGCAAGAGAGGAATGAACTTGAAACTCCATGTCCATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR GCA 72 bp | CTAGTCAAGCATCACTTTCCTATAGAACTTCTATTGTaGTTTATGTGCCAGCGAATATTGACCTCCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LVKHHFPIELLL*FMCQRILTSTE Trigger: TTCTGTGGAGGTCAATATTCGCTGGCACATAAAGCACAATAGAAGTTCTATAGGAAAGTGATGCTTGACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | GAGAAAAGGTTAAGAGGAGAGACTGTGGTGATGATTTaGGTTCAAATCTCATGTTTTAACCTCCTCATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: EKRLRGETVVMI*VQISCFNLLIN Trigger: GTTGATGAGGAGGTTAAAACATGAGATTTGAACCCAAATCATCACCACAGTCTCTCCTCTTAACCTTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | GAACTCATGAAAGGCTATGCATTTTGCATTAGGAGATaGATATGTATTGATGGACATGGGTCTTTGTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ELMKGYAFCIRR*ICIDGHGSLWV Trigger: AACCCACAAAGACCCATGTCCATCAATACATATCCATCTCCTAATGCAAAATGCATAGCCTTTCATGAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR TCA 72 bp | TCATACACTATCGTGGGCTGTAAGAAGGAACATTTATaGAAAACTTCCAGCAGCACTTTACACATACAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SYTIVGCKKEHL*KTSSSTLHIQC Trigger: ACACTGTATGTGTAAAGTGCTGCTGGAAGTTTTTCATAAATGTTCCTTCTTACAGCCCACGATAGTGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR TCA 72 bp | TTCAAATCTCATGTTTTAACCTCCTCATCAACCTCGTaGAAGTTTCCCAATCCATTTTCCATCTCTGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FKSHVLTSSSTS*KFPNPFSISAE Trigger: TTCTGCAGAGATGGAAAATGGATTGGGAAACTTTCACGAGGTTGATGAGGAGGTTAAAACATGAGATTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR TCA 72 bp | GACAATCCTGGGATGTCACTGTATACCTTCGACATTTaGGTTAATGGCTTGATTTATGATGCAGCTTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DNPGMSLYTFDI*VNGLIYDAAFS Trigger: AGAAAAAGCTGCATCATAAATCAAGCCATTAACTCAAATGTCGAAGGTATACAGTGACATCCCAGGATTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR GCA 72 bp | CATGTGGTTAAACACAATTCTTGCACACTGTTCAAATaGTTTTCAGAAAGTATCTACCAGGGCCTGATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: HVVKHNSCTLFK*FSESIYQGLIV Trigger: TACAATCAGGCCCTGGTAGATACTTTCTGAAAAGCATTTGAACAGTGTGCAAGAATTGTGTTTAACCACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR GCA 72 bp | ACCTTGTTATATATTTGGCTGATACCCCTAGGGAACTaGCATTTTCTGAAGGGAAACATTAGAGCAATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TLLYIWLIPLGN*HFLKGNIRAMN Trigger: ATTCATTGCTCTAATGTTTCCCTTCAGAAAATGGCAGTTCCCTAGGGGTATCAGCCAAATATATAACAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | GTTTATGCCTCATCTTATTACACCTTGTTATATATTTaGCTGATACCCCTAGGGAACTGCCATTTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VYASSYYTLLYI*LIPLGNCHFLK Trigger: CTTCAGAAAATGGCAGTTCCCTAGGGGTATCAGCCAAATATATAACAAGGTGTAATAAGATGAGGCATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTATTTGTTCTCTGTTCTAGTCAAGCATCACTTTCCTATAGAACTTCTATTGCCCATCTTCCTCCTTTaGATGGATGCAGAATTGATT | + |
|
Preference number: 3 (lower is better) Translates to: VYLFSVLVKHHFPIELLLPIFLL*MDAELI Trigger: AATCAATTCTGCATCCATCAAAAGGAGGAAGATGGG...CAATAGAAGTTCTATAGGAAAGTGATGCTTGACTAGAACAGAGAACAAATAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR GCA 72 bp | AGTCCAAGTGTTTGTCATGTGGTTAAACACAATTCTTaGACACTGTTCAAATGCTTTTCAGAAAGTATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SPSVCHVVKHNS*TLFKCFSESIY Trigger: GTAGATACTTTCTGAAAAGCATTTGAACAGTGTGCAAGAATTGTGTTTAACCACATGACAAACACTTGGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR GCA 72 bp | CATCACTTTCCTATAGAACTTCTATTGTGCTTTATGTaGCAGCGAATATTGACCTCCACAGAACTTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: HHFPIELLLCFM*QRILTSTELLY Trigger: ATATAAAAGTTCTGTGGAGGTCAATATTCGCTGGCACATAAAGCACAATAGAAGTTCTATAGGAAAGTGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CCA 72 bp | TGGTCTAAACTTCTCACATTTGGGTTTCCAAATTATTaGCACGGTTGTTCTTTTCCCAGAATCTATCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: WSKLLTFGFPNY*HGCSFPRIYHN Trigger: ATTATGATAGATTCTGGGAAAAGAACAACCGTGCCAATAATTTGGAAACCCAAATGTGAGAAGTTTAGACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCTGTGGACTATTCCCAGGAAACCCACGGAATGGGGCTCTCTCAGACCTTTGTTCAGCCTCAGCACTaGGCGAATAATCAAAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CPVDYSQETHGMGLSQTFVQPQH*ANNQSI Trigger: TATGCTTTGATTATTCGCTCAGTGCTGAGGCTGAAC...AAAGGTCTGAGAGAGCCCCATTCCGTGGGTTTCCTGGGAATAGTCCACAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | AGAACATGGCTCACAGAATCAACTAAACAGGGCTCTTaGGGACTCGCAGGGAAAGAAGCAGCACTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTWLTESTKQGS*GLAGKEAALLE Trigger: CTCCAGGAGTGCTGCTTCTTTCCCTGCGAGTCCCAAAGAGCCCTGTTTAGTTGATTCTGTGAGCCATGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR GCA 90 bp | CATAGATCAGTGTCTAGACCAATCATCATCAGAGGCACTTTCTTCTGCAGCTTGGAGGGCCTTAGATACTaGCTCAGTGGAGTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HRSVSRPIIIRGTFFCSLEGLRY*LSGVQP Trigger: AGGCTGAACTCCACTGAGGCAGTATCTAAGGCCCTC...CAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCTAGACACTGATCTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | TACAAAATTTTTGGCTTACCACCTGCCCTGATTGGGTaGGGAGGTGCTGGGATAATGATGTATCAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKIFGLPPALIG*GGAGIMMYQSV Trigger: CACGCTCTGATACATCATTATCCCAGCACCTCCCAACCCAATCAGGGCAGGTGGTAAGCCAAAAATTTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | GTGGCTCCCATCTTCCTCCTTTTGATGGATGCAGAATaGATTATTCCATTGTTGCCATTCACCTCTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAPIFLLLMDAE*IIPLLPFTSTS Trigger: GGAAGTAGAGGTGAATGGCAACAATGGAATAATCAATTCTGCATCCATCAAAAGGAGGAAGATGGGAGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | AGACCAATCATCATCAGAGGCACTTTCTTCTGCAGCTaGGAGCTCTATAAGCTTGGAGCAGATTTAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RPIIIRGTFFCS*ELYKLGADLEM Trigger: CATCTCTAAATCTGCTCCAAGCTTATAGAGCTCCAAGCTGCAGAAGAAAGTGCCTCTGATGATGATTGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGTTGTGGTGGAATTTTAATAAGGTATTTTAGGGTCCAAGTCTATACTTCCGAGGGCCTTAGATACTaGCTCAGTGGAGTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSCGGILIRYFRVQVYTSEGLRY*LSGVQP Trigger: AGGCTGAACTCCACTGAGGCAGTATCTAAGGCCCTC...GGAAGTATAGACTTGGACCCTAAAATACCTTATTAAAATTCCACCACAACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | AGTCTCACTGCTCCTCTTAGCATTAGACCATCAGTTTaGGTTTGTAGACCTGCAGAATCCAAGAATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLTAPLSIRPSV*VCRPAESKNWE Trigger: TTCCCAATTCTTGGATTCTGCAGGTCTACAAACCAAAACTGATGGTCTAATGCTAAGAGGAGCAGTGAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTTGTGGTGGAATTTTAATAAGGTATTTTAGGGTCCAAGTCTATACTTCCTTAACAGGCCACTCCTaGGCATCATGGACAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSCGGILIRYFRVQVYTSLTGHS*ASWTMW Trigger: CCACATTGTCCATGATGCTCAGGAGTGGCCTGTTAA...GGAAGTATAGACTTGGACCCTAAAATACCTTATTAAAATTCCACCACAACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
||
| CDS-3UTR TCA 90 bp | ATGATGGACATGGAGTTTCAAGTTCATTCCTCTCTTGCTGGTTTTGATCTTTTTTTAACAGGCCACTCCTaGGCATCATGGACAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MMDMEFQVHSSLAGFDLFLTGHS*ASWTMW Trigger: CCACATTGTCCATGATGCTCAGGAGTGGCCTGTTAA...AAAAAGATCAAAACCAGCAAGAGAGGAATGAACTTGAAACTCCATGTCCATCAT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR CCA 90 bp | GAATTGATTATTCCATTGTTGCCATTCACCTCTACTTCCATGCTCTATATGGCAATAATGAGGATGAGGTaGGAACTGCAGGTACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELIIPLLPFTSTSMLYMAIMRMR*ELQVLR Trigger: CCTCAGTACCTGCAGTTCCCACCTCATCCTCATTAT...TGCCATATAGAGCATGGAAGTAGAGGTGAATGGCAACAATGGAATAATCAATTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | AAACTTCCAGCAGCACTTTACACATACAGTGTAAACTaGAGTAGATGCCCCTGGAAGTTGTGGTGGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLPAALYTYSVN*SRCPWKLWWNF Trigger: AAAATTCCACCACAACTTCCAGGGGCATCTACTCAAGTTTACACTGTATGTGTAAAGTGCTGCTGGAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTTGTGGTGGAATTTTAATAAGGTATTTTAGGGTCCAAGTCTATACTTCCATAATGAGGATGAGGTaGGAACTGCAGGTACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSCGGILIRYFRVQVYTSIMRMR*ELQVLR Trigger: CCTCAGTACCTGCAGTTCCCACCTCATCCTCATTAT...GGAAGTATAGACTTGGACCCTAAAATACCTTATTAAAATTCCACCACAACTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAGTTGTGGTGGAATTTTAATAAGGTATTTTAGGGTCCAAGTCTATACTGGTCTATTTCATTCCTaGAGCAGTATTGTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSCGGILIRYFRVQVYTGLFHS*SSIVSG Trigger: CCCAGAGACAATACTGCTCCAGGAATGAAATAGACC...AGTATAGACTTGGACCCTAAAATACCTTATTAAAATTCCACCACAACTTCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | ACATGGAGTTTCAAGTTCATTCCTCTCTTGCTGGTTTaGATCTTTTTAATGTCCCTCCTTTCTGGAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TWSFKFIPLLLV*IFLMSLLSGMS Trigger: GCTCATTCCAGAAAGGAGGGACATTAAAAAGATCAAAACCAGCAAGAGAGGAATGAACTTGAAACTCCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTATTTTAGGGTCCAAGTCTATACTTCCTTTTTCCTGCATTCAGTGTTAGTTCAGCCTCAGCACTaGGCGAATAATCAAAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: IRYFRVQVYTSFFLHSVLVQPQH*ANNQSI Trigger: TATGCTTTGATTATTCGCTCAGTGCTGAGGCTGAAC...TAACACTGAATGCAGGAAAAAGGAAGTATAGACTTGGACCCTAAAATACCTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
||
| CDS-3UTR GCA 90 bp | GAATTGATTATTCCATTGTTGCCATTCACCTCTACTTCCATGCTCTATATGGCAATCTATCTATTGCCATaGATAGAAAGACGCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ELIIPLLPFTSTSMLYMAIYLLP*IERRLT Trigger: AGTCAGGCGTCTTTCTATGCATGGCAATAGATAGAT...TGCCATATAGAGCATGGAAGTAGAGGTGAATGGCAACAATGGAATAATCAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR CCA 90 bp | GTCTATTTGTTCTCTGTTCTAGTCAAGCATCACTTTCCTATAGAACTTCTATTGGGTCTATTTCATTCCTaGAGCAGTATTGTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VYLFSVLVKHHFPIELLLGLFHS*SSIVSG Trigger: CCCAGAGACAATACTGCTCCAGGAATGAAATAGACC...CAATAGAAGTTCTATAGGAAAGTGATGCTTGACTAGAACAGAGAACAAATAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | GGACTTGGAAGTACTATAGTTTACAGTGATGGAGAATaGCTTCTGGTTTCTTTGTTTTCCTCAAGAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLGSTIVYSDGE*LLVSLFSSRTD Trigger: GTCAGTTCTTGAGGAAAACAAAGAAACCAGAAGCAATTCTCCATCACTGTAAACTATAGTACTTCCAAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | AACTGCTTAACTGTCAGTGGTCTAAACTTCTCACATTaGGGTTTCCAAATTATTGGCACGGTTGTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCLTVSGLNFSH*GFQIIGTVVLF Trigger: GAAAAGAACAACCGTGCCAATAATTTGGAAACCCAAATGTGAGAAGTTTAGACCACTGACAGTTAAGCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | GGTTTATGCCTCATCTTATTACACCTTGTTATATATTaGGCTGATACCCCTAGGGAACTGCCATTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLCLILLHLVIY*ADTPRELPFSE Trigger: TTCAGAAAATGGCAGTTCCCTAGGGGTATCAGCCAAATATATAACAAGGTGTAATAAGATGAGGCATAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAGTTGTGGTGGAATTTTAATAAGGTATTTTAGGGTCCAAGTCTATACTATCTATCTATTGCCATaGATAGAAAGACGCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGSCGGILIRYFRVQVYTIYLLP*IERRLT Trigger: AGTCAGGCGTCTTTCTATGCATGGCAATAGATAGAT...AGTATAGACTTGGACCCTAAAATACCTTATTAAAATTCCACCACAACTTCCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
||
| CDS-3UTR CCA 90 bp | TTAATAAGGTATTTTAGGGTCCAAGTCTATACTTCCTTTTTCCTGCATTCAGTGCATGGGGTTAAGGGATaGAGGGATAACAATATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIRYFRVQVYTSFFLHSVHGVKG*RDNNMH Trigger: ATGCATATTGTTATCCCTCCATCCCTTAACCCCATG...CACTGAATGCAGGAAAAAGGAAGTATAGACTTGGACCCTAAAATACCTTATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
||
| 3UTR CAA 72 bp | ATAGAACTTCTATTGTGCTTTATGTGCCAGCGAATATaGACCTCCACAGAACTTTTATATTTCACTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: IELLLCFMCQRI*TSTELLYFTRE Trigger: TTCTCTAGTGAAATATAAAAGTTCTGTGGAGGTCAATATTCGCTGGCACATAAAGCACAATAGAAGTTCTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| CDS-3UTR CAA 90 bp | AACCTCCTCATCAACCTCGTGAAAGTTTCCCAATCCATTTTCCATCTCTGCAGAACAATATGCATCACATaGAGGAGAACAGGGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: NLLINLVKVSQSIFHLCRTICIT*RRTGMR Trigger: CCTCATCCCTGTTCTCCTCAATGTGATGCATATTGT...TCTGCAGAGATGGAAAATGGATTGGGAAACTTTCACGAGGTTGATGAGGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215413.2 |
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| CDS CCA 90 bp | ACCAGAATCATGTCAATTCCAAGTATCAACCAGGCCAATGTCAACTaGCAGTTCCTGTTAACAGTGATATCATCACAGGCCAGACTAATG | + |
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Preference number: 5 (lower is better) Translates to: TRIMSIPSINQANVN*QFLLTVISSQARLM Trigger: CATTAGTCTGGCCTGTGATGATATCACTGTTAACAGGAACTGCCAGTTGACATTGGCCTGGTTGATACTTGGAATTGACATGATTCTGGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
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| CDS-3UTR CAA 90 bp | CCTGGAAGTTGTGGTGGAATTTTAATAAGGTATTTTAGGGTCCAAGTCTATACTACAATATGCATCACATaGAGGAGAACAGGGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: PGSCGGILIRYFRVQVYTTICIT*RRTGMR Trigger: CCTCATCCCTGTTCTCCTCAATGTGATGCATATTGT...AGTATAGACTTGGACCCTAAAATACCTTATTAAAATTCCACCACAACTTCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
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| CDS TCA 72 bp | ATCCACTACAGCCAAGATACCAAGAAACTGATACATTaGCTGATGCAGGTTAGGCTCAAGGTAGATGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: IHYSQDTKKLIH*LMQVRLKVDGD Trigger: ATCACCATCTACCTTGAGCCTAACCTGCATCAGTCAATGTATCAGTTTCTTGGTATCTTGGCTGTAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098153.3 ENSMUST00000215413.2 |
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