Pregenerated sensors for OLFR688 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073909Ensembl transcript IDs: ENSMUST00000098155.3
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | TTTCAGCTCCTGTGTCCTAAGGGCATATACCACGGGGTTAAGGGATaGAGGGATGACAATATGCATCACATTGAGGAGAACAGGGATGAG | + |
Preference number: 5 (lower is better) Translates to: FQLLCPKGIYHGVKG*RDDNMHHIEENRDE Trigger: CTCATCCCTGTTCTCCTCAATGTGATGCATATTGTCATCCCTCCATCCCTTAACCCCGTGGTATATGCCCTTAGGACACAGGAGCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098155.3 |
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CDS GCA 90 bp | AGCATAGACCAGAATCATGTCACTTCCTACCACAAGCCAGGCCAATaGCAACTGGTAGAATCTGTTAACAGTGATATCATCACAGGCCAG | + |
Preference number: 5 (lower is better) Translates to: SIDQNHVTSYHKPGQ*QLVESVNSDIITGQ Trigger: CTGGCCTGTGATGATATCACTGTTAACAGATTCTACCAGTTGGCATTGGCCTGGCTTGTGGTAGGAAGTGACATGATTCTGGTCTATGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098155.3 |
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CDS CCA 72 bp | CTGTGTCCTAAGGGCATATACCACGGGGTTAAGGGATaGAGGGATGACAATATGCATCACATTGAGGAGAAC | + |
Preference number: 6 (lower is better) Translates to: LCPKGIYHGVKG*RDDNMHHIEEN Trigger: GTTCTCCTCAATGTGATGCATATTGTCATCCCTCCATCCCTTAACCCCGTGGTATATGCCCTTAGGACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098155.3 |
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CDS GCA 72 bp | CAGAATCATGTCACTTCCTACCACAAGCCAGGCCAATaGCAACTGGTAGAATCTGTTAACAGTGATATCATC | + |
Preference number: 6 (lower is better) Translates to: QNHVTSYHKPGQ*QLVESVNSDII Trigger: GATGATATCACTGTTAACAGATTCTACCAGTTGGCATTGGCCTGGCTTGTGGTAGGAAGTGACATGATTCTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098155.3 |