Pregenerated sensors for OLFR684 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047225Ensembl transcript IDs: ENSMUST00000060893.7, ENSMUST00000215552.2, ENSMUST00000215744.2, ENSMUST00000217136.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGAGAAGATGTGGGATGCAGACGACCCAGGAACAACTACTGAGTaGTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACAGAT | + |
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Preference number: 1 (lower is better) Translates to: GEKMWDADDPGTTTE*CVTRLQEMSVKVTD Trigger: ATCTGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGTTCCTGGGTCGTCTGCATCCCACATCTTCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR CCA 90 bp | CACATCTCAGACCACTGTCAGTGTTTTGCCCTAACTATCCCTTCATaGCACAAAACCCAGGAAGGACTCCGCCACACTGAGTCATACAGG | + |
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Preference number: 1 (lower is better) Translates to: HISDHCQCFALTIPS*HKTQEGLRHTESYR Trigger: CCTGTATGACTCAGTGTGGCGGAGTCCTTCCTGGGTTTTGTGCCATGAAGGGATAGTTAGGGCAAAACACTGACAGTGGTCTGAGATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR TCA 90 bp | ACCTACACGAACCTAACAACCATCTATAATTCTGCATTCAAGACCTaGACCCCTCTTCTGGCTTCCACGACATCGGGAAGCCTGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: TYTNLTTIYNSAFKT*TPLLASTTSGSLTG Trigger: CCCTGTCAGGCTTCCCGATGTCGTGGAAGCCAGAAGAGGGGTTCAGGTCTTGAATGCAGAATTATAGATGGTTGTTAGGTTCGTGTAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR CCA 90 bp | TTTCCTCAGTTGCCTATAGATCTTTGTGTAGGGCTGAGACCTCATTaGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGATT | + |
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Preference number: 1 (lower is better) Translates to: FPQLPIDLCVGLRPH*FLPIHFGLSIGVMI Trigger: AATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGGTCTCAGCCCTACACAAAGATCTATAGGCAACTGAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR TCA 90 bp | ATAACCTGCCAAGTCTGTATAATGTTGTATGTATGTTTTCATAACTaGCAGCTTAGCTCTGGACAACCAATTGGTGTGCTCCTTCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: ITCQVCIMLYVCFHN*QLSSGQPIGVLLPE Trigger: TTCAGGAAGGAGCACACCAATTGGTTGTCCAGAGCTAAGCTGTCAGTTATGAAAACATACATACAACATTATACAGACTTGGCAGGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR GCA 90 bp | CTGGATAATCCACCAGCTCTGAACTTTGAATATGTGGGCTTAGGATaGAAATGGAGAAACAGATTTGTGATTCTTGGAGATATTTTTACA | + |
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Preference number: 1 (lower is better) Translates to: LDNPPALNFEYVGLG*KWRNRFVILGDIFT Trigger: TGTAAAAATATCTCCAAGAATCACAAATCTGTTTCTCCATTTGCATCCTAAGCCCACATATTCAAAGTTCAGAGCTGGTGGATTATCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACAGTCCTTTACAAATCCTaGAGGTCTTCTCCTGCATGG | + |
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Preference number: 2 (lower is better) Translates to: TTTECCVTRLQEMSVKVTVLYKS*RSSPAW Trigger: CCATGCAGGAGAAGACCTGCAGGATTTGTAAAGGAC...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAACTCTCAAGGCAGCTGTaGTCTGTGTTTACTCTTATC | + |
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Preference number: 2 (lower is better) Translates to: LELTCNWGRRCGMQTTQELSRQL*SVFTLI Trigger: GATAAGAGTAAACACAGAGCACAGCTGCCTTGAGAG...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAACTAACTATCCCTTCATaGCACAAAACCCAGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LELTCNWGRRCGMQTTQELTIPS*HKTQEG Trigger: TCCTTCCTGGGTTTTGTGCCATGAAGGGATAGTTAG...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAATCCCATTATGTATTATaGGTTCTAAAGGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LELTCNWGRRCGMQTTQESHYVL*VLKVPG Trigger: CCCAGGCACCTTTAGAACTCATAATACATAATGGGA...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAATTTGAAACCAGTCACTaGGTGGCAGAGTTAACATCT | + |
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Preference number: 2 (lower is better) Translates to: LELTCNWGRRCGMQTTQEFETSH*VAELTS Trigger: AGATGTTAACTCTGCCACTCAGTGACTGGTTTCAAA...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACATCCCATTATGTATTATaGGTTCTAAAGGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TTTECCVTRLQEMSVKVTSHYVL*VLKVPG Trigger: CCCAGGCACCTTTAGAACTCATAATACATAATGGGA...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACAGATCTAGGAAGGCACTaGAAGGCACATTTGCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: TTTECCVTRLQEMSVKVTDLGRH*KAHLLK Trigger: TTTTAGCAAATGTGCCTTTCAGTGCCTTCCTAGATC...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | AATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTATAGATCTTTGTGTAGGGGTGGAACAAAAGAGATaGGAAATGGGGAGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NNTSPTPFPQLPIDLCVGVEQKR*EMGRGR Trigger: CCTTCCTCTCCCCATTTCTCATCTCTTTTGTTCCAC...CCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGTGTCAAGGTGACAGATaGCATAGCCTTCAGCGCTAC | + |
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Preference number: 2 (lower is better) Translates to: CRMSGRLDNPPALNFEYVCQGDR*HSLQRY Trigger: GTAGCGCTGAAGGCTATGTCATCTGTCACCTTGACA...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACACTGAGGTATGGAGGGTaGAACAAAAGAGATGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TTTECCVTRLQEMSVKVTLRYGG*NKRDEK Trigger: TTTCTCATCTCTTTTGTTCCACCCTCCATACCTCAG...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAAATCCTGGCATTTTTGTaGTTGGAAACTGAGGATATC | + |
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Preference number: 2 (lower is better) Translates to: LELTCNWGRRCGMQTTQEILAFL*LETEDI Trigger: GATATCCTCAGTTTCCAACCACAAAAATGCCAGGAT...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCAAGCACTAGGACTCCGCCACACTaGGTCATACAGGAAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: SWHFCGWKLRISPALSSTRTPPH*VIQEKQ Trigger: TTGTTTTTCCTGTATGACTCAGTGTGGCGGAGTCCT...AGTGCTTGATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGAGGACTCCGCCACACTaGGTCATACAGGAAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: CRMSGRLDNPPALNFEYVRTPPH*VIQEKQ Trigger: TTGTTTTTCCTGTATGACTCAGTGTGGCGGAGTCCT...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAAATGTCGAAAATCGGATaGAAAGTTCTAAATCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LELTCNWGRRCGMQTTQEMSKIG*KVLNLG Trigger: TCCCAGATTTAGAACTTTTCATCCGATTTTCGACAT...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGTGGTGTGCTCCTTCCTaGAAAATAACACCTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: CRMSGRLDNPPALNFEYVWCAPS*KITPLP Trigger: TGGGAGAGGTGTTATTTTTCAGGAAGGAGCACACCA...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACAGTATGTTTTCATAACTaGCAGCTTAGCTCTGGACAA | + |
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Preference number: 2 (lower is better) Translates to: TTTECCVTRLQEMSVKVTVCFHN*QLSSGQ Trigger: TTGTCCAGAGCTAAGCTGTCAGTTATGAAAACATAC...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCAAGCACTGTCCTTTACAAATCCTaGAGGTCTTCTCCTGCATGG | + |
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Preference number: 2 (lower is better) Translates to: SWHFCGWKLRISPALSSTVLYKS*RSSPAW Trigger: CCATGCAGGAGAAGACCTGCAGGATTTGTAAAGGAC...AGTGCTTGATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR CAA 90 bp | TGCTCCTTCCTGAAAAATAACACCTCTCCCACTCCCTTTCCTCAGTaGCCTATAGATCTTTGTGTAGGGCTGAGACCTCATTGGTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: CSFLKNNTSPTPFPQ*PIDLCVGLRPHWFL Trigger: TAAAAACCAATGAGGTCTCAGCCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATTTTTCAGGAAGGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGAGAGGAGAGAGGAATTaGTCTAGGAAGGCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CRMSGRLDNPPALNFEYVRGERN*SRKALK Trigger: TTTCAGTGCCTTCCTAGATCAATTCCTCTCTCCTCT...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACAATGTCGAAAATCGGATaGAAAGTTCTAAATCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TTTECCVTRLQEMSVKVTMSKIG*KVLNLG Trigger: TCCCAGATTTAGAACTTTTCATCCGATTTTCGACAT...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGCCACTGTCAGTGTTTTaGCCTAACTATCCCTTCATG | + |
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Preference number: 2 (lower is better) Translates to: CRMSGRLDNPPALNFEYVPLSVF*PNYPFM Trigger: CATGAAGGGATAGTTAGGGCAAAACACTGACAGTGG...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR CCA 90 bp | AATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTATAGATCTTTGTGTAGGGTGGCATTTTTGTGGTTaGAAACTGAGGATATCCCCT | + |
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Preference number: 2 (lower is better) Translates to: NNTSPTPFPQLPIDLCVGWHFCG*KLRISP Trigger: AGGGGATATCCTCAGTTTCCAACCACAAAAATGCCA...CCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | AATCAAATCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCGTGGAACAAAAGAGATaGGAAATGGGGAGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NQILAFLWLETEDIPCFIVEQKR*EMGRGR Trigger: CCTTCCTCTCCCCATTTCTCATCTCTTTTGTTCCAC...GATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGATTTGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCTGGTGTGCTCCTTCCTaGAAAATAACACCTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: YHENLAISVLTIKPSLTSWCAPS*KITPLP Trigger: TGGGAGAGGTGTTATTTTTCAGGAAGGAGCACACCA...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGCTGAGGTATGGAGGGTaGAACAAAAGAGATGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: CRMSGRLDNPPALNFEYVLRYGG*NKRDEK Trigger: TTTCTCATCTCTTTTGTTCCACCCTCCATACCTCAG...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR CCA 90 bp | AATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTATAGATCTTTGTGTAGGGATCCTGGCATTTTTGTaGTTGGAAACTGAGGATATC | + |
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Preference number: 2 (lower is better) Translates to: NNTSPTPFPQLPIDLCVGILAFL*LETEDI Trigger: GATATCCTCAGTTTCCAACCACAAAAATGCCAGGAT...CCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR CAA 90 bp | CTTTCCTCAGTTGCCTATAGATCTTTGTGTAGGGCTGAGACCTCATaGGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGAT | + |
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Preference number: 2 (lower is better) Translates to: LSSVAYRSLCRAETS*VFTHPFWFVHWCHD Trigger: ATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGGTCTCAGCCCTACACAAAGATCTATAGGCAACTGAGGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCAGAGGAGAGAGGAATTaGTCTAGGAAGGCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: YHENLAISVLTIKPSLTSRGERN*SRKALK Trigger: TTTCAGTGCCTTCCTAGATCAATTCCTCTCTCCTCT...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTAGTTCAGATGTGTAGAAGACTCATCTGTAAACACTTGCATCCAGAAAAAGTGGAACAAAAGAGATaGGAAATGGGGAGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLVQMCRRLICKHLHPEKVEQKR*EMGRGR Trigger: CCTTCCTCTCCCCATTTCTCATCTCTTTTGTTCCAC...TTTTTCTGGATGCAAGTGTTTACAGATGAGTCTTCTACACATCTGAACTAGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCATTGGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGATTAGTGTCCTTTACAAATCCTaGAGGTCTTCTCCTGCATGG | + |
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Preference number: 2 (lower is better) Translates to: PHWFLPIHFGLSIGVMISVLYKS*RSSPAW Trigger: CCATGCAGGAGAAGACCTGCAGGATTTGTAAAGGAC...ACTAATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR GCA 90 bp | AATCAAATCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCCCACTGTCAGTGTTTTaGCCTAACTATCCCTTCATG | + |
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Preference number: 2 (lower is better) Translates to: NQILAFLWLETEDIPCFIPLSVF*PNYPFM Trigger: CATGAAGGGATAGTTAGGGCAAAACACTGACAGTGG...GATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGATTTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR CCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCCTAACTATCCCTTCATaGCACAAAACCCAGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YHENLAISVLTIKPSLTSLTIPS*HKTQEG Trigger: TCCTTCCTGGGTTTTGTGCCATGAAGGGATAGTTAG...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGATCCTGGCATTTTTGTaGTTGGAAACTGAGGATATC | + |
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Preference number: 2 (lower is better) Translates to: CRMSGRLDNPPALNFEYVILAFL*LETEDI Trigger: GATATCCTCAGTTTCCAACCACAAAAATGCCAGGAT...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTCCCTCCAAACACCCCCATATACTTTTGCATGTTCTTCAAATTCACAGCGATCTAGGAAGGCACTaGAAGGCACATTTGCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: FLPSKHPHILLHVLQIHSDLGRH*KAHLLK Trigger: TTTTAGCAAATGTGCCTTTCAGTGCCTTCCTAGATC...GCTGTGAATTTGAAGAACATGCAAAAGTATATGGGGGTGTTTGGAGGGAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTAGTTCAGATGTGTAGAAGACTCATCTGTAAACACTTGCATCCAGAAAAAAGAGGAGAGAGGAATTaGTCTAGGAAGGCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLVQMCRRLICKHLHPEKRGERN*SRKALK Trigger: TTTCAGTGCCTTCCTAGATCAATTCCTCTCTCCTCT...TTTTTCTGGATGCAAGTGTTTACAGATGAGTCTTCTACACATCTGAACTAGGCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGATGTCGAAAATCGGATaGAAAGTTCTAAATCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: CRMSGRLDNPPALNFEYVMSKIG*KVLNLG Trigger: TCCCAGATTTAGAACTTTTCATCCGATTTTCGACAT...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR TCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCTGTCCATTGGTGTCATaGTTAGTGGGGAAAATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: YHENLAISVLTIKPSLTSCPLVS*LVGKMQ Trigger: TTGCATTTTCCCCACTAATCATGACACCAATGGACA...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCTGGCATTTTTGTGGTTaGAAACTGAGGATATCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: YHENLAISVLTIKPSLTSWHFCG*KLRISP Trigger: AGGGGATATCCTCAGTTTCCAACCACAAAAATGCCA...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTCCCTCCAAACACCCCCATATACTTTTGCATGTTCTTCAAATTCACAGCTGGCATTTTTGTGGTTaGAAACTGAGGATATCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FLPSKHPHILLHVLQIHSWHFCG*KLRISP Trigger: AGGGGATATCCTCAGTTTCCAACCACAAAAATGCCA...GCTGTGAATTTGAAGAACATGCAAAAGTATATGGGGGTGTTTGGAGGGAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTCATTGGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGATTAGTTCCCATTATGTATTATaGGTTCTAAAGGTGCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PHWFLPIHFGLSIGVMISSHYVL*VLKVPG Trigger: CCCAGGCACCTTTAGAACTCATAATACATAATGGGA...ACTAATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTCATTGGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGATTAGTGATCTAGGAAGGCACTaGAAGGCACATTTGCTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: PHWFLPIHFGLSIGVMISDLGRH*KAHLLK Trigger: TTTTAGCAAATGTGCCTTTCAGTGCCTTCCTAGATC...ACTAATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR TCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCGTATGTTTTCATAACTaGCAGCTTAGCTCTGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: YHENLAISVLTIKPSLTSVCFHN*QLSSGQ Trigger: TTGTCCAGAGCTAAGCTGTCAGTTATGAAAACATAC...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCATTGGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGATTAGTCTGAGGTATGGAGGGTaGAACAAAAGAGATGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PHWFLPIHFGLSIGVMISLRYGG*NKRDEK Trigger: TTTCTCATCTCTTTTGTTCCACCCTCCATACCTCAG...ACTAATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR GCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCACCCCCATATACTTTTaGATGTTCTTCAAATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: YHENLAISVLTIKPSLTSTPIYF*MFFKFT Trigger: TGTGAATTTGAAGAACATGCAAAAGTATATGGGGGT...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR GCA 72 bp | ATGTGGGATGCAGACGACCCAGGAACAACTACTGAGTaGTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: MWDADDPGTTTE*CVTRLQEMSVK Trigger: CTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGTTCCTGGGTCGTCTGCATCCCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR CCA 72 bp | GACCACTGTCAGTGTTTTGCCCTAACTATCCCTTCATaGCACAAAACCCAGGAAGGACTCCGCCACACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DHCQCFALTIPS*HKTQEGLRHTE Trigger: CTCAGTGTGGCGGAGTCCTTCCTGGGTTTTGTGCCATGAAGGGATAGTTAGGGCAAAACACTGACAGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR TCA 72 bp | TTCATGGCACAAAACCCAGGAAGGACTCCGCCACACTaGGTCATACAGGAAAAACAAGGGCTCAGGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FMAQNPGRTPPH*VIQEKQGLRVL Trigger: AAGGACCCTGAGCCCTTGTTTTTCCTGTATGACTCAGTGTGGCGGAGTCCTTCCTGGGTTTTGTGCCATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAACTGGCATTTTTGTGGTaGGAAACTGAGGATATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LELTCNWGRRCGMQTTQELAFLW*ETEDIP Trigger: GGGGATATCCTCAGTTTCCAACCACAAAAATGCCAG...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGCTCCTTCCTGAAAAATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTCAAATCCTGGCATTTTaGTGGTTGGAAACTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VCSFLKNNTSPTPFPQLPQILAF*WLETED Trigger: ATCCTCAGTTTCCAACCACAAAAATGCCAGGATTTG...AGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATTTTTCAGGAAGGAGCACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR TCA 72 bp | GAACCCCTCTTCTGGCTTCCACGACATCGGGAAGCCTaGCAGGGAAAACAATTAGACACACGAAATAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: EPLFWLPRHREA*QGKQLDTRNKQ Trigger: TTGTTTATTTCGTGTGTCTAATTGTTTTCCCTGTCAGGCTTCCCGATGTCGTGGAAGCCAGAAGAGGGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR TCA 72 bp | AACCTAACAACCATCTATAATTCTGCATTCAAGACCTaGACCCCTCTTCTGGCTTCCACGACATCGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: NLTTIYNSAFKT*TPLLASTTSGS Trigger: GCTTCCCGATGTCGTGGAAGCCAGAAGAGGGGTTCAGGTCTTGAATGCAGAATTATAGATGGTTGTTAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR GCA 72 bp | ATAACTGACAGCTTAGCTCTGGACAACCAATTGGTGTaGTCCTTCCTGAAAAATAACACCTCTCCCACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ITDSLALDNQLV*SFLKNNTSPTP Trigger: GGGAGTGGGAGAGGTGTTATTTTTCAGGAAGGAGCACACCAATTGGTTGTCCAGAGCTAAGCTGTCAGTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGCTGGCATTTTTGTGGTaGGAAACTGAGGATATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CRMSGRLDNPPALNFEYVLAFLW*ETEDIP Trigger: GGGGATATCCTCAGTTTCCAACCACAAAAATGCCAG...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR TCA 72 bp | AGGAAAGAAGAAGGAGGAAAATCTGAACCCTGGAACTaGCATGTAATTGGGGGAGAAGATGTGGGATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RKEEGGKSEPWN*HVIGGEDVGCR Trigger: TCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAGGGTTCAGATTTTCCTCCTTCTTCTTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTAGTTCAGATGTGTAGAAGACTCATCTGTAAACACTTGCATCCAGAAAAAGCTCTGGACAACCAATaGGTGTGCTCCTTCCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLVQMCRRLICKHLHPEKALDNQ*VCSFLK Trigger: TTTCAGGAAGGAGCACACCAATTGGTTGTCCAGAGC...TTTTTCTGGATGCAAGTGTTTACAGATGAGTCTTCTACACATCTGAACTAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGTTCAAGTTGACAGTTTaGAAACCAGTCACTGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CRMSGRLDNPPALNFEYVFKLTV*KPVTEW Trigger: CCACTCAGTGACTGGTTTCAAAACTGTCAACTTGAA...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGGACAAATCATCTCATTaGTACTTAGGATGGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: CRMSGRLDNPPALNFEYVDKSSH*YLGWVM Trigger: CATGACCCATCCTAAGTACAAATGAGATGATTTGTC...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCAAGCACTGACAAATCATCTCATTaGTACTTAGGATGGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SWHFCGWKLRISPALSSTDKSSH*YLGWVM Trigger: CATGACCCATCCTAAGTACAAATGAGATGATTTGTC...AGTGCTTGATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR GCA 72 bp | AGTTCAGTAATGATTTCTGCTTTTGCACAATACTCATaGTTAGATCCCAGCACCTACACGAACCTAACAACC | + |
|
Preference number: 3 (lower is better) Translates to: SSVMISAFAQYS*LDPSTYTNLTT Trigger: GGTTGTTAGGTTCGTGTAGGTGCTGGGATCTAAGCATGAGTATTGTGCAAAAGCAGAAATCATTACTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR CCA 72 bp | TTGCCTATAGATCTTTGTGTAGGGCTGAGACCTCATTaGTTTTTACCCATCCATTTTGGTTTGTCCATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPIDLCVGLRPH*FLPIHFGLSIG Trigger: ACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGGTCTCAGCCCTACACAAAGATCTATAGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCCAAATCCTGGCATTTTaGTGGTTGGAAACTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: YHENLAISVLTIKPSLTSQILAF*WLETED Trigger: ATCCTCAGTTTCCAACCACAAAAATGCCAGGATTTG...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTCCCTCCAAACACCCCCATATACTTTTGCATGTTCTTCAAATTCACAGCGACAAATCATCTCATTaGTACTTAGGATGGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: FLPSKHPHILLHVLQIHSDKSSH*YLGWVM Trigger: CATGACCCATCCTAAGTACAAATGAGATGATTTGTC...GCTGTGAATTTGAAGAACATGCAAAAGTATATGGGGGTGTTTGGAGGGAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCCACCCCCATATACTTTaGCATGTTCTTCAAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YHENLAISVLTIKPSLTSHPHIL*HVLQIH Trigger: GTGAATTTGAAGAACATGCAAAAGTATATGGGGGTG...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR TCA 72 bp | CAAGTCTGTATAATGTTGTATGTATGTTTTCATAACTaGCAGCTTAGCTCTGGACAACCAATTGGTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QVCIMLYVCFHN*QLSSGQPIGVL Trigger: GAGCACACCAATTGGTTGTCCAGAGCTAAGCTGTCAGTTATGAAAACATACATACAACATTATACAGACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR TCA 72 bp | TCTTCCAATCAAATATGGTATATAGTGAGATTAGCCTaGGGTATGGAGGGTGGAACAAAAGAGATGAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSNQIWYIVRLA*GMEGGTKEMRN Trigger: ATTTCTCATCTCTTTTGTTCCACCCTCCATACCTCAGGCTAATCTCACTATATACCATATTTGATTGGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGGGAGAGCCTGGACACTaGCAGGTTGGTGCAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CRMSGRLDNPPALNFEYVGEPGH*QVGANA Trigger: TGCATTTGCACCAACCTGTCAGTGTCCAGGCTCTCC...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTCCTTCCTGAAAAATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTGGAGGAATTCAGAGATaGGAGCTTCAGAATCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCSFLKNNTSPTPFPQLPGGIQR*ELQNRW Trigger: CCAACGATTCTGAAGCTCCCATCTCTGAATTCCTCC...AGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATTTTTCAGGAAGGAGCACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR TCA 90 bp | AATCAAATCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCGCCCTAACCACAAACTaGTCAGTGATGACGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NQILAFLWLETEDIPCFIALTTN*SVMTVG Trigger: CCCGACCGTCATCACTGATCAGTTTGTGGTTAGGGC...GATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGATTTGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR TCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCGCCCTAACCACAAACTaGTCAGTGATGACGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YHENLAISVLTIKPSLTSALTTN*SVMTVG Trigger: CCCGACCGTCATCACTGATCAGTTTGTGGTTAGGGC...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAATTCTTGATGATGTTCTaGGCACAGTACTTTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LELTCNWGRRCGMQTTQEFLMMF*AQYFSL Trigger: CAGACTAAAGTACTGTGCTCAGAACATCATCAAGAA...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR TCA 90 bp | AATCAAATCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCGGAGAGCCTGGACACTaGCAGGTTGGTGCAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQILAFLWLETEDIPCFIGEPGH*QVGANA Trigger: TGCATTTGCACCAACCTGTCAGTGTCCAGGCTCTCC...GATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGATTTGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACAGTCTGGCAGAAAGAATaGGAACTGGGAGAGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: TTTECCVTRLQEMSVKVTVWQKE*ELGEKL Trigger: TAATTTCTCTCCCAGTTCCCATTCTTTCTGCCAGAC...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACACACAGTACTTTAGTCTaGCAGAAAGAATGGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TTTECCVTRLQEMSVKVTHSTLV*QKEWEL Trigger: CAGTTCCCATTCTTTCTGCCAGACTAAAGTACTGTG...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTCCTTCCTGAAAAATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTCACAGTACTTTAGTCTaGCAGAAAGAATGGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VCSFLKNNTSPTPFPQLPHSTLV*QKEWEL Trigger: CAGTTCCCATTCTTTCTGCCAGACTAAAGTACTGTG...AGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATTTTTCAGGAAGGAGCACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR CAA 72 bp | CTCTCCCACTCCCTTTCCTCAGTTGCCTATAGATCTTaGTGTAGGGCTGAGACCTCATTGGTTTTTACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSHSLSSVAYRS*CRAETSLVFTH Trigger: ATGGGTAAAAACCAATGAGGTCTCAGCCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTAGTTCAGATGTGTAGAAGACTCATCTGTAAACACTTGCATCCAGAAAAAGCCCTAACCACAAACTaGTCAGTGATGACGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVQMCRRLICKHLHPEKALTTN*SVMTVG Trigger: CCCGACCGTCATCACTGATCAGTTTGTGGTTAGGGC...TTTTTCTGGATGCAAGTGTTTACAGATGAGTCTTCTACACATCTGAACTAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR TCA 90 bp | CCTCATTGGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGATTAGTGGAGAGCCTGGACACTaGCAGGTTGGTGCAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHWFLPIHFGLSIGVMISGEPGH*QVGANA Trigger: TGCATTTGCACCAACCTGTCAGTGTCCAGGCTCTCC...ACTAATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAACAACCTGCTACAAGTTaGTATAGTTTATTGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LELTCNWGRRCGMQTTQEQPATS*YSLLRV Trigger: TACCCTCAATAAACTATATCAACTTGTAGCAGGTTG...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
||
| 3UTR CAA 72 bp | CTGAAAAATAACACCTCTCCCACTCCCTTTCCTCAGTaGCCTATAGATCTTTGTGTAGGGCTGAGACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKNNTSPTPFPQ*PIDLCVGLRPH Trigger: ATGAGGTCTCAGCCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATTTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR GCA 90 bp | TGTAGGATGTCTGGGAGACTGGATAATCCACCAGCTCTGAACTTTGAATATGTGAAGTTCTGGATTCCCTaGTTGATCTCCCTGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: CRMSGRLDNPPALNFEYVKFWIP*LISLVL Trigger: AAGAACCAGGGAGATCAAGCAGGGAATCCAGAACTT...CACATATTCAAAGTTCAGAGCTGGTGGATTATCCAGTCTCCCAGACATCCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR CAA 72 bp | GTTTTCATAACTGACAGCTTAGCTCTGGACAACCAATaGGTGTGCTCCTTCCTGAAAAATAACACCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VFITDSLALDNQ*VCSFLKNNTSP Trigger: GGGAGAGGTGTTATTTTTCAGGAAGGAGCACACCAATTGGTTGTCCAGAGCTAAGCTGTCAGTTATGAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR CAA 72 bp | CAGCGCTACTTACAGAGTCAGCATTGTGATTTCAAGTaGACAGTTTTGAAACCAGTCACTGAGTGGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: QRYLQSQHCDFK*TVLKPVTEWQS Trigger: ACTCTGCCACTCAGTGACTGGTTTCAAAACTGTCAACTTGAAATCACAATGCTGACTCTGTAAGTAGCGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCAAGCACTGTCTGGCAGAAAGAATaGGAACTGGGAGAGAAATTA | + |
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Preference number: 4 (lower is better) Translates to: SWHFCGWKLRISPALSSTVWQKE*ELGEKL Trigger: TAATTTCTCTCCCAGTTCCCATTCTTTCTGCCAGAC...AGTGCTTGATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCAAGCACTCACAGTACTTTAGTCTaGCAGAAAGAATGGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: SWHFCGWKLRISPALSSTHSTLV*QKEWEL Trigger: CAGTTCCCATTCTTTCTGCCAGACTAAAGTACTGTG...AGTGCTTGATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| 3UTR CAA 72 bp | GTTGCCTATAGATCTTTGTGTAGGGCTGAGACCTCATaGGTTTTTACCCATCCATTTTGGTTTGTCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: VAYRSLCRAETS*VFTHPFWFVHW Trigger: CCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGGTCTCAGCCCTACACAAAGATCTATAGGCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR GCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCAAGTTCTGGATTCCCTaGTTGATCTCCCTGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: YHENLAISVLTIKPSLTSKFWIP*LISLVL Trigger: AAGAACCAGGGAGATCAAGCAGGGAATCCAGAACTT...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CCA 90 bp | AGCCTAGTTCAGATGTGTAGAAGACTCATCTGTAAACACTTGCATCCAGAAAAAGGAGGAATTCAGAGATaGGAGCTTCAGAATCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLVQMCRRLICKHLHPEKGGIQR*ELQNRW Trigger: CCAACGATTCTGAAGCTCCCATCTCTGAATTCCTCC...TTTTTCTGGATGCAAGTGTTTACAGATGAGTCTTCTACACATCTGAACTAGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR GCA 90 bp | AGCCTAGTTCAGATGTGTAGAAGACTCATCTGTAAACACTTGCATCCAGAAAAAAAGTTCTGGATTCCCTaGTTGATCTCCCTGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SLVQMCRRLICKHLHPEKKFWIP*LISLVL Trigger: AAGAACCAGGGAGATCAAGCAGGGAATCCAGAACTT...TTTTTCTGGATGCAAGTGTTTACAGATGAGTCTTCTACACATCTGAACTAGGCT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCGTCTGGCAGAAAGAATaGGAACTGGGAGAGAAATTA | + |
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Preference number: 4 (lower is better) Translates to: YHENLAISVLTIKPSLTSVWQKE*ELGEKL Trigger: TAATTTCTCTCCCAGTTCCCATTCTTTCTGCCAGAC...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR TCA 90 bp | AATCAAATCCTGGCATTTTTGTGGTTGGAAACTGAGGATATCCCCTGCTTTATCTTCTTGATGATGTTCTaGGCACAGTACTTTAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: NQILAFLWLETEDIPCFIFLMMF*AQYFSL Trigger: CAGACTAAAGTACTGTGCTCAGAACATCATCAAGAA...GATAAAGCAGGGGATATCCTCAGTTTCCAACCACAAAAATGCCAGGATTTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR TCA 90 bp | TACCATGAAAATCTAGCTATTTCAGTTCTTACAATAAAGCCCTCCCTCACCTCCCAACCTGCTACAAGTTaGTATAGTTTATTGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: YHENLAISVLTIKPSLTSQPATS*YSLLRV Trigger: TACCCTCAATAAACTATATCAACTTGTAGCAGGTTG...GGAGGTGAGGGAGGGCTTTATTGTAAGAACTGAAATAGCTAGATTTTCATGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR TCA 90 bp | CCTCATTGGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGATTAGTCAACCTGCTACAAGTTaGTATAGTTTATTGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PHWFLPIHFGLSIGVMISQPATS*YSLLRV Trigger: TACCCTCAATAAACTATATCAACTTGTAGCAGGTTG...ACTAATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | GTGTGCTCCTTCCTGAAAAATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTATGAGAAGGGTGGCATaGGCCCCCATGGCCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VCSFLKNNTSPTPFPQLPMRRVA*APMARR Trigger: CCTCCTGGCCATGGGGGCCAATGCCACCCTTCTCAT...AGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATTTTTCAGGAAGGAGCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAACATGTGCTCAGGGCTTaGGCCACAGCTCCCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LELTCNWGRRCGMQTTQEHVLRA*ATAPSA Trigger: AGCAGAGGGAGCTGTGGCCAAAGCCCTGAGCACATG...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | AATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTATAGATCTTTGTGTAGGGATGAGAAGGGTGGCATaGGCCCCCATGGCCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: NNTSPTPFPQLPIDLCVGMRRVA*APMARR Trigger: CCTCCTGGCCATGGGGGCCAATGCCACCCTTCTCAT...CCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | CTGGAACTGACATGTAATTGGGGGAGAAGATGTGGGATGCAGACGACCCAGGAACTGGACACTGACAGGTaGGTGCAAATGCAGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LELTCNWGRRCGMQTTQELDTDR*VQMQFL Trigger: CAAGAACTGCATTTGCACCAACCTGTCAGTGTCCAG...TTCCTGGGTCGTCTGCATCCCACATCTTCTCCCCCAATTACATGTCAGTTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | AATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTATAGATCTTTGTGTAGGGCTGGACACTGACAGGTaGGTGCAAATGCAGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NNTSPTPFPQLPIDLCVGLDTDR*VQMQFL Trigger: CAAGAACTGCATTTGCACCAACCTGTCAGTGTCCAG...CCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | AGCCTAGTTCAGATGTGTAGAAGACTCATCTGTAAACACTTGCATCCAGAAAAACATGTGCTCAGGGCTTaGGCCACAGCTCCCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SLVQMCRRLICKHLHPEKHVLRA*ATAPSA Trigger: AGCAGAGGGAGCTGTGGCCAAAGCCCTGAGCACATG...TTTTTCTGGATGCAAGTGTTTACAGATGAGTCTTCTACACATCTGAACTAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | ACAACTACTGAGTGCTGTGTCACTAGGCTGCAGGAGATGAGTGTCAAGGTGACAAAGCCAATAGATTTATaGTCAAACCAGAAGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: TTTECCVTRLQEMSVKVTKPIDL*SNQKMA Trigger: GGCCATCTTCTGGTTTGACAATAAATCTATTGGCTT...TGTCACCTTGACACTCATCTCCTGCAGCCTAGTGACACAGCACTCAGTAGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTCCCTCCAAACACCCCCATATACTTTTGCATGTTCTTCAAATTCACAGCCTGGACACTGACAGGTaGGTGCAAATGCAGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FLPSKHPHILLHVLQIHSLDTDR*VQMQFL Trigger: CAAGAACTGCATTTGCACCAACCTGTCAGTGTCCAG...GCTGTGAATTTGAAGAACATGCAAAAGTATATGGGGGTGTTTGGAGGGAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | AATAACACCTCTCCCACTCCCTTTCCTCAGTTGCCTATAGATCTTTGTGTAGGGAAGCCAATAGATTTATaGTCAAACCAGAAGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: NNTSPTPFPQLPIDLCVGKPIDL*SNQKMA Trigger: GGCCATCTTCTGGTTTGACAATAAATCTATTGGCTT...CCCTACACAAAGATCTATAGGCAACTGAGGAAAGGGAGTGGGAGAGGTGTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS-3UTR CAA 90 bp | CCTCATTGGTTTTTACCCATCCATTTTGGTTTGTCCATTGGTGTCATGATTAGTAAGCCAATAGATTTATaGTCAAACCAGAAGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: PHWFLPIHFGLSIGVMISKPIDL*SNQKMA Trigger: GGCCATCTTCTGGTTTGACAATAAATCTATTGGCTT...ACTAATCATGACACCAATGGACAAACCAAAATGGATGGGTAAAAACCAATGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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| CDS TCA 72 bp | CGGCTTATAATGAAGATAGCAGCCCTAACCACAAACTaGTCAGTGATGACGGTCGGGTACTGTAGAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: RLIMKIAALTTN*SVMTVGYCRGL Trigger: TAAGCCTCTACAGTACCCGACCGTCATCACTGATCAGTTTGTGGTTAGGGCTGCTATCTTCATTATAAGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060893.7 ENSMUST00000215552.2 ENSMUST00000215744.2 ENSMUST00000217136.2 |
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