Pregenerated sensors for OLFR683 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044120Ensembl transcript IDs: ENSMUST00000209879.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTGCTGCCTATaGAAAGAAGTCTCCTGGGTGGCACATGGTCTCCTTACCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: KMAECEEYEQELCCL*KEVSWVAHGLLTWS Trigger: GCTCCAGGTAAGGAGACCATGTGCCACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 90 bp | TGCCTATGCAAAGAAGTCTCCTGGGTGGCACATGGTCTCCTTACCTaGAGCACTACTCAGCCATCATTAGAGAAGTTACCTCCAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: CLCKEVSWVAHGLLT*STTQPSLEKLPPAA Trigger: TGCTGCTGGAGGTAACTTCTCTAATGATGGCTGAGTAGTGCTCCAGGTAAGGAGACCATGTGCCACCCAGGAGACTTCTTTGCATAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 90 bp | TTAATAAAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTGCTaGCTATGCAAAGAAGTCTCCTGGGTGGCACATGGTCTCCTTACC | + |
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Preference number: 1 (lower is better) Translates to: LIKMAECEEYEQELC*LCKEVSWVAHGLLT Trigger: GGTAAGGAGACCATGTGCCACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTTTATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 90 bp | TATTTAATAAAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTaGTGCCTATGCAAAGAAGTCTCCTGGGTGGCACATGGTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: YLIKMAECEEYEQEL*CLCKEVSWVAHGLL Trigger: AAGGAGACCATGTGCCACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTTTATTAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 90 bp | GTTTGGCTACAGCAGGATCATTTCCAGCTCTTACTCTTTCACCTGTaGCTGACTTTACTATCTCTTACAGCTCAGCTTCACTCTACCAGG | + |
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Preference number: 1 (lower is better) Translates to: VWLQQDHFQLLLFHL*LTLLSLTAQLHSTR Trigger: CCTGGTAGAGTGAAGCTGAGCTGTAAGAGATAGTAAAGTCAGCCACAGGTGAAAGAGTAAGAGCTGGAAATGATCCTGCTGTAGCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 90 bp | CATAGACACTTCCAAATAATTCCAGGATGCAAAACGCTCAGGGTTTaGCTACAGCAGGATCATTTCCAGCTCTTACTCTTTCACCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: HRHFQIIPGCKTLRV*LQQDHFQLLLFHLW Trigger: CCACAGGTGAAAGAGTAAGAGCTGGAAATGATCCTGCTGTAGCCAAACCCTGAGCGTTTTGCATCCTGGAATTATTTGGAAGTGTCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 90 bp | TTAGGTCATCCTTCATCAGCATGTCAAAAGTCACTCTCAAGTGAGTaGCAGGAAACAGCACACAGGAAGTTCTCAGTTACTACTCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LGHPSSACQKSLSSE*QETAHRKFSVTTPK Trigger: TTTTGGAGTAGTAACTGAGAACTTCCTGTGTGCTGTTTCCTGGCACTCACTTGAGAGTGACTTTTGACATGCTGATGAAGGATGACCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 90 bp | ATGTATACGTCTAAAGACAAGTGGCAAAAAGAGAGATGCAGATGGTaGCTCAAATATGATGGAAAAATGAGACAGAACAACATGAAGTCG | + |
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Preference number: 1 (lower is better) Translates to: MYTSKDKWQKERCRW*LKYDGKMRQNNMKS Trigger: CGACTTCATGTTGTTCTGTCTCATTTTTCCATCATATTTGAGGCACCATCTGCATCTCTCTTTTTGCCACTTGTCTTTAGACGTATACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTGCTGCCTATGCAAATCAGCTGAGACGTCATaGACAGCAGGAAGCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: IKMAECEEYEQELCCLCKSAETS*TAGSRD Trigger: GTCCCTGCTTCCTGCTGTGCATGACGTCTCAGCTGA...TTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTGCTGCCTATGCAAAGGGGCTTCCTGTGTTTaGAAACATGTGTCTCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: IKMAECEEYEQELCCLCKGASCV*KHVSLH Trigger: ATGCAGAGACACATGTTTGCAAACACAGGAAGCCCC...TTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR CCA 90 bp | ATAAAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTGCTGCCTATGCAAAAAGACAGAAAGGGAGTaGATCTGGATGAGTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: IKMAECEEYEQELCCLCKKTERE*IWMSGW Trigger: CCATCCACTCATCCAGATCCACTCCCTTTCTGTCTT...TTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGGGGTGGTAGAAGAGTGTTTGAAGCATCTTATATTTTGGTTAGGATCAGAAAGGGAGTGGATCTaGATGAGTGGATGGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: EEGVVEECLKHLIFWLGSEREWI*MSGWGE Trigger: CTCTCCCCATCCACTCATCCAGATCCACTCCCTTTC...TGATCCTAACCAAAATATAAGATGCTTCAAACACTCTTCTACCACCCCTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGTTCATATTCTAAAGAACGGCTATTTAATAAAAATGGCAGAGTGTGAGGGGAGTGGATCTGGATaGGTGGATGGGGAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LEVHILKNGYLIKMAECEGSGSG*VDGERG Trigger: TCCTCTCTCCCCATCCACTCATCCAGATCCACTCCC...CTCACACTCTGCCATTTTTATTAAATAGCCGTTCTTTAGAATATGAACTTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTGCTGCCTATGCAAACAAATAATTCCAGGATaGAAAACGCTCAGGGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: IKMAECEEYEQELCCLCKQIIPG*KTLRVW Trigger: CCAAACCCTGAGCGTTTTGCATCCTGGAATTATTTG...TTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR GCA 90 bp | TCTATCCGCTACTCTAAAGCATATGAGGTTGAGAAGATGAATAAAGCACTTCACGAGCTGTGCTGCCTATaGAAAGAAGTCTCCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SIRYSKAYEVEKMNKALHELCCL*KEVSWV Trigger: CACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTC...GTGAAGTGCTTTATTCATCTTCTCAACCTCATATGCTTTAGAGTAGCGGATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR CCA 90 bp | TCTATCCGCTACTCTAAAGCATATGAGGTTGAGAAGATGAATAAAGCACTTCACAACAGAATGCACCCATaGAATCCCTCCCCTCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SIRYSKAYEVEKMNKALHNRMHP*NPSPQA Trigger: GGCTTGAGGGGAGGGATTCCATGGGTGCATTCTGTT...GTGAAGTGCTTTATTCATCTTCTCAACCTCATATGCTTTAGAGTAGCGGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAGGGGTGGTAGAAGAGTGTTTGAAGCATCTTATATTTTGGTTAGGATCATATGAGCAGGAGCTGTaGTGCCTATGCAAAGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: EEGVVEECLKHLIFWLGSYEQEL*CLCKEV Trigger: GACTTCTTTGCATAGGCAGCACAGCTCCTGCTCATA...TGATCCTAACCAAAATATAAGATGCTTCAAACACTCTTCTACCACCCCTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGGGGTGGTAGAAGAGTGTTTGAAGCATCTTATATTTTGGTTAGGATCAATCTGGATGAGTGGATaGGGAGAGAGGAAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: EEGVVEECLKHLIFWLGSIWMSG*GERKKL Trigger: CAGTTTCTTCCTCTCTCCCCATCCACTCATCCAGAT...TGATCCTAACCAAAATATAAGATGCTTCAAACACTCTTCTACCACCCCTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR CCA 90 bp | TCTATCCGCTACTCTAAAGCATATGAGGTTGAGAAGATGAATAAAGCACTTCACAAGAAGTCTCCTGGGTaGCACATGGTCTCCTTACCT | + |
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Preference number: 2 (lower is better) Translates to: SIRYSKAYEVEKMNKALHKKSPG*HMVSLP Trigger: AGGTAAGGAGACCATGTGCCACCCAGGAGACTTCTT...GTGAAGTGCTTTATTCATCTTCTCAACCTCATATGCTTTAGAGTAGCGGATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGTTCATATTCTAAAGAACGGCTATTTAATAAAAATGGCAGAGTGTGAGGGGTCCTTAACAGAATaGACCCATGGAATCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LEVHILKNGYLIKMAECEGSLTE*THGIPP Trigger: GGGAGGGATTCCATGGGTGCATTCTGTTAAGGACCC...CTCACACTCTGCCATTTTTATTAAATAGCCGTTCTTTAGAATATGAACTTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CAA 90 bp | AACCTTAGAGGTCCTTTGCCTTGTGTTTTTAGGGGCTTCCTGTGTTaGCAAACATGTGTCTCTGCATCTGTACATGTATCTTATGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: NLRGPLPCVFRGFLC*QTCVSASVHVSYAY Trigger: ATAAGCATAAGATACATGTACAGATGCAGAGACACATGTTTGCAAACACAGGAAGCCCCTAAAAACACAAGGCAAAGGACCTCTAAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR CCA 90 bp | AACCTTAGAGGTCCTTTGCCTTGTGTTTTTAGGGGCTTCCTGTGTTTGCAAACATTACTCTTTCACCTGTaGCTGACTTTACTATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NLRGPLPCVFRGFLCLQTLLFHL*LTLLSL Trigger: AAGAGATAGTAAAGTCAGCCACAGGTGAAAGAGTAA...TGTTTGCAAACACAGGAAGCCCCTAAAAACACAAGGCAAAGGACCTCTAAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGTTCATATTCTAAAGAACGGCTATTTAATAAAAATGGCAGAGTGTGAGACCTCCAGCAGCAGGTaGGAACAAAAAGAGACCCAA | + |
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Preference number: 2 (lower is better) Translates to: LEVHILKNGYLIKMAECETSSSR*EQKETQ Trigger: TTGGGTCTCTTTTTGTTCCCACCTGCTGCTGGAGGT...CTCACACTCTGCCATTTTTATTAAATAGCCGTTCTTTAGAATATGAACTTCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR TCA 72 bp | CCTCAAGCCCCAGGGACCCCCTGCAGAAGAGGAGATTaGAAGAGTGTAAGAGCCATAGAGGATGGAGGACTC | + |
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Preference number: 3 (lower is better) Translates to: PQAPGTPCRRGD*KSVRAIEDGGL Trigger: GAGTCCTCCATCCTCTATGGCTCTTACACTCTTTCAATCTCCTCTTCTGCAGGGGGTCCCTGGGGCTTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 72 bp | AGGAGCTGTGCTGCCTATGCAAAGAAGTCTCCTGGGTaGCACATGGTCTCCTTACCTGGAGCACTACTCAGC | + |
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Preference number: 3 (lower is better) Translates to: RSCAAYAKKSPG*HMVSLPGALLS Trigger: GCTGAGTAGTGCTCCAGGTAAGGAGACCATGTGCCACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 72 bp | GAGCAGGAGCTGTGCTGCCTATGCAAAGAAGTCTCCTaGGTGGCACATGGTCTCCTTACCTGGAGCACTACT | + |
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Preference number: 3 (lower is better) Translates to: EQELCCLCKEVS*VAHGLLTWSTT Trigger: AGTAGTGCTCCAGGTAAGGAGACCATGTGCCACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTCCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR TCA 72 bp | CTCACAGAGACTGGAGCATTGTGTACAGGGCCCGAATaGGGTTGCACCAGAGAGAATCCTAGAGCTGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: LTETGALCTGPE*GCTRENPRAEH Trigger: GTGCTCAGCTCTAGGATTCTCTCTGGTGCAACCTCATTCGGGCCCTGTACACAATGCTCCAGTCTCTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 72 bp | GAGTGTGAGGAGTATGAGCAGGAGCTGTGCTGCCTATaGAAAGAAGTCTCCTGGGTGGCACATGGTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: ECEEYEQELCCL*KEVSWVAHGLL Trigger: AAGGAGACCATGTGCCACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 72 bp | ATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTGCTaGCTATGCAAAGAAGTCTCCTGGGTGGCACATGGT | + |
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Preference number: 3 (lower is better) Translates to: MAECEEYEQELC*LCKEVSWVAHG Trigger: ACCATGTGCCACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 72 bp | AAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTaGTGCCTATGCAAAGAAGTCTCCTGGGTGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: KMAECEEYEQEL*CLCKEVSWVAH Trigger: ATGTGCCACCCAGGAGACTTCTTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 72 bp | GAGGTTGAGAAGATGAATAAAGCACTTCACGTGGCATaGAAGAGCTTAGAGAGGGGCACACCTGTGACTCTA | + |
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Preference number: 3 (lower is better) Translates to: EVEKMNKALHVA*KSLERGTPVTL Trigger: TAGAGTCACAGGTGTGCCCCTCTCTAAGCTCTTCCATGCCACGTGAAGTGCTTTATTCATCTTCTCAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR TCA 72 bp | ACCTGTGACTCTATGAGGCCAAATTGCCTCCATCGGTaGATAAAGGCAGGCATTGTGCAGAAGGTAGACTTT | + |
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Preference number: 3 (lower is better) Translates to: TCDSMRPNCLHR*IKAGIVQKVDF Trigger: AAAGTCTACCTTCTGCACAATGCCTGCCTTTATTCACCGATGGAGGCAATTTGGCCTCATAGAGTCACAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR TCA 72 bp | TCATCCTTCATCAGCATGTCAAAAGTCACTCTCAAGTaGGTGCCAGGAAACAGCACACAGGAAGTTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SSFISMSKVTLK*VPGNSTQEVLS Trigger: ACTGAGAACTTCCTGTGTGCTGTTTCCTGGCACTCACTTGAGAGTGACTTTTGACATGCTGATGAAGGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 72 bp | AGATTAGGCCATAGACACTTCCAAATAATTCCAGGATaGAAAACGCTCAGGGTTTGGCTACAGCAGGATCAT | + |
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Preference number: 3 (lower is better) Translates to: RLGHRHFQIIPG*KTLRVWLQQDH Trigger: ATGATCCTGCTGTAGCCAAACCCTGAGCGTTTTGCATCCTGGAATTATTTGGAAGTGTCTATGGCCTAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 72 bp | GCAGGCATTGTGCAGAAGGTAGACTTTAACAGAGGCTaGAGGACAGGAGTTTATAAGTGGGTAAAGTCATAT | + |
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Preference number: 3 (lower is better) Translates to: AGIVQKVDFNRG*RTGVYKWVKSY Trigger: ATATGACTTTACCCACTTATAAACTCCTGTCCTCCAGCCTCTGTTAAAGTCTACCTTCTGCACAATGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR GCA 72 bp | GTCCTTTGCCTTGTGTTTTTAGGGGCTTCCTGTGTTTaGAAACATGTGTCTCTGCATCTGTACATGTATCTT | + |
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Preference number: 3 (lower is better) Translates to: VLCLVFLGASCV*KHVSLHLYMYL Trigger: AAGATACATGTACAGATGCAGAGACACATGTTTGCAAACACAGGAAGCCCCTAAAAACACAAGGCAAAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 72 bp | TTCCAAATAATTCCAGGATGCAAAACGCTCAGGGTTTaGCTACAGCAGGATCATTTCCAGCTCTTACTCTTT | + |
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Preference number: 3 (lower is better) Translates to: FQIIPGCKTLRV*LQQDHFQLLLF Trigger: AAAGAGTAAGAGCTGGAAATGATCCTGCTGTAGCCAAACCCTGAGCGTTTTGCATCCTGGAATTATTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR TCA 72 bp | CCTAAAAGCTATCTCCAAGTGATAACCACTTGTAAGTaGACAATTTGTTTTCTCCAAGGGAGTCTCACTAGG | + |
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Preference number: 3 (lower is better) Translates to: PKSYLQVITTCK*TICFLQGSLTR Trigger: CCTAGTGAGACTCCCTTGGAGAAAACAAATTGTTCACTTACAAGTGGTTATCACTTGGAGATAGCTTTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CCA 72 bp | GGGGTGGTAGAAGAGTGTTTGAAGCATCTTATATTTTaGTTAGGATCAAACTTTGATGTTAGGAAACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GVVEECLKHLIF*LGSNFDVRKQR Trigger: TCTCTGTTTCCTAACATCAAAGTTTGATCCTAACCAAAATATAAGATGCTTCAAACACTCTTCTACCACCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| CDS-3UTR GCA 90 bp | TTGGCTACAGCAGGATCATTTCCAGCTCTTACTCTTTCACCTGTGGCTGACTTTAGGTTCCGTATTCCCTaGTTGATCTCCCTGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LATAGSFPALTLSPVADFRFRIP*LISLVL Trigger: AAGAACCAGGGAGATCAAGCAGGGAATACGGAACCT...AAAGTCAGCCACAGGTGAAAGAGTAAGAGCTGGAAATGATCCTGCTGTAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| CDS-3UTR GCA 90 bp | AACCTTAGAGGTCCTTTGCCTTGTGTTTTTAGGGGCTTCCTGTGTTTGCAAACAAATCCCATTTCTGGCTaGTACAAAGATGGCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NLRGPLPCVFRGFLCLQTNPISG*YKDGSP Trigger: AGGGCTGCCATCTTTGTAGCAGCCAGAAATGGGATT...TGTTTGCAAACACAGGAAGCCCCTAAAAACACAAGGCAAAGGACCTCTAAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CAA 72 bp | CTTCCAAATAATTCCAGGATGCAAAACGCTCAGGGTTaGGCTACAGCAGGATCATTTCCAGCTCTTACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPNNSRMQNAQG*ATAGSFPALTL Trigger: AAGAGTAAGAGCTGGAAATGATCCTGCTGTAGCCAAACCCTGAGCGTTTTGCATCCTGGAATTATTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| 3UTR CAA 72 bp | CACCCAACTGTGGAGGAAGGGGTGGTAGAAGAGTGTTaGAAGCATCTTATATTTTGGTTAGGATCAAACTTT | + |
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Preference number: 4 (lower is better) Translates to: HPTVEEGVVEEC*KHLIFWLGSNF Trigger: AAAGTTTGATCCTAACCAAAATATAAGATGCTTCAAACACTCTTCTACCACCCCTTCCTCCACAGTTGGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| CDS-3UTR GCA 90 bp | AACCTTAGAGGTCCTTTGCCTTGTGTTTTTAGGGGCTTCCTGTGTTTGCAAACAGTTCCTGATAATTCTTaGACAATATCTCAGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NLRGPLPCVFRGFLCLQTVPDNS*TISQLG Trigger: TCCCAACTGAGATATTGTGCAAGAATTATCAGGAAC...TGTTTGCAAACACAGGAAGCCCCTAAAAACACAAGGCAAAGGACCTCTAAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| CDS-3UTR TCA 90 bp | TCTATCCGCTACTCTAAAGCATATGAGGTTGAGAAGATGAATAAAGCACTTCACGCACAGCCTTCAGAATaGATGAATAAGATAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: SIRYSKAYEVEKMNKALHAQPSE*MNKIEQ Trigger: TTGTTCTATCTTATTCATTCATTCTGAAGGCTGTGC...GTGAAGTGCTTTATTCATCTTCTCAACCTCATATGCTTTAGAGTAGCGGATAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| CDS-3UTR CAA 90 bp | ATAAAAATGGCAGAGTGTGAGGAGTATGAGCAGGAGCTGTGCTGCCTATGCAAATCATCACAGGAGAGTTaGGAAACAGACATGTTAGTG | + |
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Preference number: 5 (lower is better) Translates to: IKMAECEEYEQELCCLCKSSQES*ETDMLV Trigger: CACTAACATGTCTGTTTCCAAACTCTCCTGTGATGA...TTTGCATAGGCAGCACAGCTCCTGCTCATACTCCTCACACTCTGCCATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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| CDS-3UTR CAA 90 bp | AACCTTAGAGGTCCTTTGCCTTGTGTTTTTAGGGGCTTCCTGTGTTTGCAAACATGCACAATATCTCAGTaGGGAAGAAAGTATGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: NLRGPLPCVFRGFLCLQTCTISQ*GRKYGD Trigger: ATCCCCATACTTTCTTCCCAACTGAGATATTGTGCA...TGTTTGCAAACACAGGAAGCCCCTAAAAACACAAGGCAAAGGACCTCTAAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209879.3 |
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