Pregenerated sensors for OLFR68 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061626Ensembl transcript IDs: ENSMUST00000216811.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTCAACCAATCATGTAACTGCCAAGTTGGAAAGTCTCTCACCCTaGCACCATAAAAGGCAAGGCTGTTACCAGGTCAGCACCATCCAC | + |
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Preference number: 1 (lower is better) Translates to: MSTNHVTAKLESLSP*HHKRQGCYQVSTIH Trigger: GTGGATGGTGCTGACCTGGTAACAGCCTTGCCTTTTATGGTGGCAGGGTGAGAGACTTTCCAACTTGGCAGTTACATGATTGGTTGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR TCA 90 bp | CAGGGTCTGATCCTGAGCTTGAATAAAGACTTTTTGATTTGCATGTaGGTTGGACTCTTGGTGGTCTCTGGTGGTCTATGGGAACCTTGT | + |
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Preference number: 1 (lower is better) Translates to: QGLILSLNKDFLICM*VGLLVVSGGLWEPC Trigger: ACAAGGTTCCCATAGACCACCAGAGACCACCAAGAGTCCAACTCACATGCAAATCAAAAAGTCTTTATTCAAGCTCAGGATCAGACCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CCA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTaGAATCATGTCACTCTGGTAACAATCACAGTTCTCCTGGTCAAA | + |
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Preference number: 1 (lower is better) Translates to: CPLDEFSYWKNTNLF*NHVTLVTITVLLVK Trigger: TTTGACCAGGAGAACTGTGATTGTTACCAGAGTGACATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CAA 90 bp | GTTACCAGGTCAGCACCATCCACACCTTCCACTGTGCAGGAGAGGTaGCAGGGTCTGATCCTGAGCTTGAATAAAGACTTTTTGATTTGC | + |
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Preference number: 2 (lower is better) Translates to: VTRSAPSTPSTVQER*QGLILSLNKDFLIC Trigger: GCAAATCAAAAAGTCTTTATTCAAGCTCAGGATCAGACCCTGCAACCTCTCCTGCACAGTGGAAGGTGTGGATGGTGCTGACCTGGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGTGGTCTATGGGAACCTTGTCAGAGGGCAATGGCACATAGCAATTGTGACTGCAGGTGCTTGGTaGATTGGAAATTCAAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: SLVVYGNLVRGQWHIAIVTAGAW*IGNSRV Trigger: TACCCTTGAATTTCCAATCCACCAAGCACCTGCAGT...CACAATTGCTATGTGCCATTGCCCTCTGACAAGGTTCCCATAGACCACCAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGTGGTCTATGGGAACCTTGTCAGAGGGCAATGGCACATAGCAATTGTGCCTTCCTCTCCAGCTTaGTTTCCTATTACTTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLVVYGNLVRGQWHIAIVPSSPA*FPITFS Trigger: TGAAAAAGTAATAGGAAACCAAGCTGGAGAGGAAGG...CACAATTGCTATGTGCCATTGCCCTCTGACAAGGTTCCCATAGACCACCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTGGAATCATGGCCCAAACTGCAGGTaGTTGGTGGATTGGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: CPLDEFSYWKNTNLFWNHGPNCR*LVDWKF Trigger: GAATTTCCAATCCACCAAGCACCTGCAGTTTGGGCC...ATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGGCAACACCATTAGAAAATGGAACAAGGCCCAAACTGCAGGTGCTTGGTGGGGATATGCAGTTGACTaGAGTTTAATGTTAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: IGNTIRKWNKAQTAGAWWGYAVD*SLMLEC Trigger: ACACTCTAACATTAAACTTCAGTCAACTGCATATCC...CCACCAAGCACCTGCAGTTTGGGCCTTGTTCCATTTTCTAATGGTGTTGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAACTCACTTCCTCCAACTTCGCAAATTCTCCATTTTCCTCTGAAAAGTTCCACATTTTCTCTGTGTTaGCCTTCCTCTCCAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SNSLPPTSQILHFPLKSSTFSLC*PSSPAW Trigger: CCAAGCTGGAGAGGAAGGCCAACACAGAGAAAATGT...GGAACTTTTCAGAGGAAAATGGAGAATTTGCGAAGTTGGAGGAAGTGAGTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CAA 90 bp | TGTTTACATTTTAATCCCAGGTATGGGATATGGCACTGTTTCAGATaGTCCACAGCAGCTGATTATGTTTTGCCTAATGCTCTAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CLHFNPRYGIWHCFR*STAADYVLPNALAG Trigger: CCCTGCTAGAGCATTAGGCAAAACATAATCAGCTGCTGTGGACAATCTGAAACAGTGCCATATCCCATACCTGGGATTAAAATGTAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAACTCACTTCCTCCAACTTCGCAAATTCTCCATTTTCCTCTGAAAAGTTCCAGATTAGAATTGGACTaGAAAACTTGGCCACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SNSLPPTSQILHFPLKSSRLELD*KTWPLS Trigger: GCTCAGTGGCCAAGTTTTTCAGTCCAATTCTAATCT...GGAACTTTTCAGAGGAAAATGGAGAATTTGCGAAGTTGGAGGAAGTGAGTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAACTCACTTCCTCCAACTTCGCAAATTCTCCATTTTCCTCTGAAAAGTTCCTTACACACAACACAATaGTTTAAAACAGAAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SNSLPPTSQILHFPLKSSLHTTQ*FKTEEG Trigger: CCCCTCTTCTGTTTTAAATCATTGTGTTGTGTGTAA...GGAACTTTTCAGAGGAAAATGGAGAATTTGCGAAGTTGGAGGAAGTGAGTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTGGAATCATTTCACTTTAAACAACTaGTTGCTCCCAGTTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: CPLDEFSYWKNTNLFWNHFTLNN*LLPVVS Trigger: AGAAACAACTGGGAGCAAGCAGTTGTTTAAAGTGAA...ATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CCA 72 bp | GATTTGCATGTGAGTTGGACTCTTGGTGGTCTCTGGTaGTCTATGGGAACCTTGTCAGAGGGCAATGGCACA | + |
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Preference number: 3 (lower is better) Translates to: DLHVSWTLGGLW*SMGTLSEGNGT Trigger: TGTGCCATTGCCCTCTGACAAGGTTCCCATAGACCACCAGAGACCACCAAGAGTCCAACTCACATGCAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CCA 72 bp | TTTGATTTGCATGTGAGTTGGACTCTTGGTGGTCTCTaGTGGTCTATGGGAACCTTGTCAGAGGGCAATGGC | + |
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Preference number: 3 (lower is better) Translates to: FDLHVSWTLGGL*WSMGTLSEGNG Trigger: GCCATTGCCCTCTGACAAGGTTCCCATAGACCACCAGAGACCACCAAGAGTCCAACTCACATGCAAATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGGTGGTCTATGGGAACCTTGTCAGAGGGCAATGGCACATAGCAATTGTGCCAAACTGCAGGTGCTaGGTGGATTGGAAATTCAAG | + |
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Preference number: 3 (lower is better) Translates to: SLVVYGNLVRGQWHIAIVPNCRC*VDWKFK Trigger: CTTGAATTTCCAATCCACCAAGCACCTGCAGTTTGG...CACAATTGCTATGTGCCATTGCCCTCTGACAAGGTTCCCATAGACCACCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGGTGGTCTATGGGAACCTTGTCAGAGGGCAATGGCACATAGCAATTGTGATTGGACTGAAAAACTaGGCCACTGAGCCAAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SLVVYGNLVRGQWHIAIVIGLKN*ATEPKS Trigger: GCTTTTTGGCTCAGTGGCCAAGTTTTTCAGTCCAAT...CACAATTGCTATGTGCCATTGCCCTCTGACAAGGTTCCCATAGACCACCAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CCA 72 bp | TCTCTGGTGGTCTATGGGAACCTTGTCAGAGGGCAATaGCACATAGCAATTGTGCTAAATTCATGTTGGACC | + |
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Preference number: 3 (lower is better) Translates to: SLVVYGNLVRGQ*HIAIVLNSCWT Trigger: GGTCCAACATGAATTTAGCACAATTGCTATGTGCCATTGCCCTCTGACAAGGTTCCCATAGACCACCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGGTGGTCTATGGGAACCTTGTCAGAGGGCAATGGCACATAGCAATTGTGTGCGACAGCATATATTaGTATTGGAGGAAGATAAAC | + |
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Preference number: 3 (lower is better) Translates to: SLVVYGNLVRGQWHIAIVCDSIY*YWRKIN Trigger: GTTTATCTTCCTCCAATACAAATATATGCTGTCGCA...CACAATTGCTATGTGCCATTGCCCTCTGACAAGGTTCCCATAGACCACCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTGTCAGAGGGCAATGGCACATAGCAATTGTGCTAAATTCATGTTGGACCTCACTGCTTGCTCCCAGTaGTTTCTTTATCCTCCAATT | + |
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Preference number: 3 (lower is better) Translates to: PCQRAMAHSNCAKFMLDLTACSQ*FLYPPI Trigger: AATTGGAGGATAAAGAAACAACTGGGAGCAAGCAGT...GAGGTCCAACATGAATTTAGCACAATTGCTATGTGCCATTGCCCTCTGACAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTGGAATCATTGTGCTAAATTCATGTaGGACCTCAGGAACGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: CPLDEFSYWKNTNLFWNHCAKFM*DLRNGE Trigger: TTCCCCGTTCCTGAGGTCCAACATGAATTTAGCACA...ATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR TCA 72 bp | ATCCTGAGCTTGAATAAAGACTTTTTGATTTGCATGTaGGTTGGACTCTTGGTGGTCTCTGGTGGTCTATGG | + |
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Preference number: 3 (lower is better) Translates to: ILSLNKDFLICM*VGLLVVSGGLW Trigger: CCATAGACCACCAGAGACCACCAAGAGTCCAACTCACATGCAAATCAAAAAGTCTTTATTCAAGCTCAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTGGAATCATGCCTTCCTCTCCAGCTaGGTTTCCTATTACTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: CPLDEFSYWKNTNLFWNHAFLSS*VSYYFF Trigger: GAAAAAGTAATAGGAAACCAAGCTGGAGAGGAAGGC...ATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR TCA 72 bp | CTGCAGGTGCTTGGTGGATTGGAAATTCAAGGGTACTaGTATAAAAACTTGTCTTTGGGGTTTGTAAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LQVLGGLEIQGY*YKNLSLGFVRR Trigger: CCTTCTTACAAACCCCAAAGACAAGTTTTTATATCAGTACCCTTGAATTTCCAATCCACCAAGCACCTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR GCA 72 bp | GCAAAGAGAAAGGAACAATGTGAAAACAGATCCAGATaGCCTGCTCATAGTGAAGAGCCCAGTTTAACATTA | + |
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Preference number: 3 (lower is better) Translates to: AKRKEQCENRSR*PAHSEEPSLTL Trigger: TAATGTTAAACTGGGCTCTTCACTATGAGCAGGGCATCTGGATCTGTTTTCACATTGTTCCTTTCTCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CCA 72 bp | ATGGAACAAGGCCCAAACTGCAGGTGCTTGGTGGATTaGAAATTCAAGGGTACTGATATAAAAACTTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: MEQGPNCRCLVD*KFKGTDIKTCL Trigger: AAGACAAGTTTTTATATCAGTACCCTTGAATTTCCAATCCACCAAGCACCTGCAGTTTGGGCCTTGTTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CAA 90 bp | TCTAACTCACTTCCTCCAACTTCGCAAATTCTCCATTTTCCTCTGAAAAGTTCCCCTTCCAGCTGCCTTTaGTATACATTTTCTCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SNSLPPTSQILHFPLKSSPSSCL*YTFSLC Trigger: ACACAGAGAAAATGTATACAAAAGGCAGCTGGAAGG...GGAACTTTTCAGAGGAAAATGGAGAATTTGCGAAGTTGGAGGAAGTGAGTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTGGAATCATACTTTAAACAACTGCTaGCTCCCAGTTGTTTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: CPLDEFSYWKNTNLFWNHTLNNC*LPVVSL Trigger: TAAAGAAACAACTGGGAGCAAGCAGTTGTTTAAAGT...ATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR TCA 72 bp | AACTTGTCTTTGGGGTTTGTAAGAAGGATATGCAGTTaGCTGAAGTTTAATGTTAGAGTGTCAACCTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: NLSLGFVRRICS*LKFNVRVSTCS Trigger: GGAACAGGTTGACACTCTAACATTAAACTTCAGTCAACTGCATATCCTTCTTACAAACCCCAAAGACAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CCA 72 bp | AGAATATGTTTACATTTTAATCCCAGGTATGGGATATaGCACTGTTTCAGATTGTCCACAGCAGCTGATTAT | + |
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Preference number: 3 (lower is better) Translates to: RICLHFNPRYGI*HCFRLSTAADY Trigger: ATAATCAGCTGCTGTGGACAATCTGAAACAGTGCCATATCCCATACCTGGGATTAAAATGTAAACATATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR TCA 90 bp | ATTGGCAACACCATTAGAAAATGGAACAAGGCCCAAACTGCAGGTGCTTGGTGGAATCCAGCACTGCACTaGCTCCAGGCCAGGGATCCC | + |
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Preference number: 4 (lower is better) Translates to: IGNTIRKWNKAQTAGAWWNPALH*LQARDP Trigger: GGGATCCCTGGCCTGGAGTCAGTGCAGTGCTGGATT...CCACCAAGCACCTGCAGTTTGGGCCTTGTTCCATTTTCTAATGGTGTTGCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR GCA 90 bp | ATTGGCAACACCATTAGAAAATGGAACAAGGCCCAAACTGCAGGTGCTTGGTGGATTCCAATCCAGCACTaGACTGACTCCAGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IGNTIRKWNKAQTAGAWWIPIQH*TDSRPG Trigger: CCCTGGCCTGGAGTCAGTGCAGTGCTGGATTGGAAT...CCACCAAGCACCTGCAGTTTGGGCCTTGTTCCATTTTCTAATGGTGTTGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR CCA 90 bp | CCTTGTCAGAGGGCAATGGCACATAGCAATTGTGCTAAATTCATGTTGGACCTCAATCGAGCCTCCTTCTaGGGCAGCTGGAAGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: PCQRAMAHSNCAKFMLDLNRASF*GSWKTV Trigger: CACAGTCTTCCAGCTGCCCCAGAAGGAGGCTCGATT...GAGGTCCAACATGAATTTAGCACAATTGCTATGTGCCATTGCCCTCTGACAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR CCA 90 bp | CCTTGTCAGAGGGCAATGGCACATAGCAATTGTGCTAAATTCATGTTGGACCTCTCCTTCTGGGGCAGCTaGAAGACTGTGATGAAGATT | + |
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Preference number: 4 (lower is better) Translates to: PCQRAMAHSNCAKFMLDLSFWGS*KTVMKI Trigger: AATCTTCATCACAGTCTTCCAGCTGCCCCAGAAGGA...GAGGTCCAACATGAATTTAGCACAATTGCTATGTGCCATTGCCCTCTGACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR GCA 90 bp | GCAACACCATTAGAAAATGGAACAAGGCCCAAACTGCAGGTGCTTGGTGGATTGTCTGATATCTTGAGCTaGCAGTTTCACAATGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ATPLENGTRPKLQVLGGLSDILS*QFHNGH Trigger: ATGGCCATTGTGAAACTGGCAGCTCAAGATATCAGA...CAATCCACCAAGCACCTGCAGTTTGGGCCTTGTTCCATTTTCTAATGGTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CAA 72 bp | GCCAAGCAAATGTCAACCAATCATGTAACTGCCAAGTaGGAAAGTCTCTCACCCTGCCACCATAAAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: AKQMSTNHVTAK*ESLSPCHHKRQ Trigger: TTGCCTTTTATGGTGGCAGGGTGAGAGACTTTCCAACTTGGCAGTTACATGATTGGTTGACATTTGCTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR CCA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTGGAATCATCCTGATTCTGTGGCCTaGAATGAGTGGATGAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CPLDEFSYWKNTNLFWNHPDSVA*NEWMSS Trigger: GGAACTCATCCACTCATTCCAGGCCACAGAATCAGG...ATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR TCA 90 bp | ATTGGCAACACCATTAGAAAATGGAACAAGGCCCAAACTGCAGGTGCTTGGTGGGAGATAATGGTAGTTTaGAAGTACTTAAGGCGACAT | + |
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Preference number: 4 (lower is better) Translates to: IGNTIRKWNKAQTAGAWWEIMVV*KYLRRH Trigger: ATGTCGCCTTAAGTACTTTCAAACTACCATTATCTC...CCACCAAGCACCTGCAGTTTGGGCCTTGTTCCATTTTCTAATGGTGTTGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR CCA 90 bp | CCTTGTCAGAGGGCAATGGCACATAGCAATTGTGCTAAATTCATGTTGGACCTCATGTACATGGGTATGTaGAGGCTCTTTTCACTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PCQRAMAHSNCAKFMLDLMYMGM*RLFSLL Trigger: CAAAAGTGAAAAGAGCCTCCACATACCCATGTACAT...GAGGTCCAACATGAATTTAGCACAATTGCTATGTGCCATTGCCCTCTGACAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR TCA 90 bp | TCTAACTCACTTCCTCCAACTTCGCAAATTCTCCATTTTCCTCTGAAAAGTTCCAAAATCTGTGGCATGTaGAACCAGAAGATGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: SNSLPPTSQILHFPLKSSKICGM*NQKMPN Trigger: GTTGGGCATCTTCTGGTTTCACATGCCACAGATTTT...GGAACTTTTCAGAGGAAAATGGAGAATTTGCGAAGTTGGAGGAAGTGAGTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR CCA 90 bp | TCTAACTCACTTCCTCCAACTTCGCAAATTCTCCATTTTCCTCTGAAAAGTTCCGCAAGTGGTGAGTTGTaGAGAGAAGATAGTAGCATG | + |
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Preference number: 4 (lower is better) Translates to: SNSLPPTSQILHFPLKSSASGEL*REDSSM Trigger: CATGCTACTATCTTCTCTCCACAACTCACCACTTGC...GGAACTTTTCAGAGGAAAATGGAGAATTTGCGAAGTTGGAGGAAGTGAGTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| 3UTR CAA 72 bp | TTTAATCCCAGGTATGGGATATGGCACTGTTTCAGATaGTCCACAGCAGCTGATTATGTTTTGCCTAATGCT | + |
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Preference number: 4 (lower is better) Translates to: FNPRYGIWHCFR*STAADYVLPNA Trigger: AGCATTAGGCAAAACATAATCAGCTGCTGTGGACAATCTGAAACAGTGCCATATCCCATACCTGGGATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR TCA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTGGAATCATAGAAGGCATGAAGACTaGGCCATTGAACTTGATCAT | + |
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Preference number: 4 (lower is better) Translates to: CPLDEFSYWKNTNLFWNHRRHED*AIELDH Trigger: ATGATCAAGTTCAATGGCTCAGTCTTCATGCCTTCT...ATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR CAA 90 bp | ATTGGCAACACCATTAGAAAATGGAACAAGGCCCAAACTGCAGGTGCTTGGTGGGGAGATAATGGTAGTTaGAAAGTACTTAAGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: IGNTIRKWNKAQTAGAWWGDNGS*KVLKAT Trigger: TGTCGCCTTAAGTACTTTCAAACTACCATTATCTCC...CCACCAAGCACCTGCAGTTTGGGCCTTGTTCCATTTTCTAATGGTGTTGCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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| CDS-3UTR CAA 90 bp | TGCCCTCTGGATGAATTCAGCTACTGGAAAAATACCAACTTGTTCTGGAATCATGTTGATTCTGATATCTaGAGCTGCCAGTTTCACAAT | + |
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Preference number: 5 (lower is better) Translates to: CPLDEFSYWKNTNLFWNHVDSDI*SCQFHN Trigger: ATTGTGAAACTGGCAGCTCAAGATATCAGAATCAAC...ATGATTCCAGAACAAGTTGGTATTTTTCCAGTAGCTGAATTCATCCAGAGGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216811.2 |
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