Pregenerated sensors for OLFR678 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073913Ensembl transcript IDs: ENSMUST00000098160.2, ENSMUST00000213622.2
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCCAGATGTGTTCCAGTCCTCCTGCTTCTGCTTCATGGAACTTaGATCCCAAGTAGTCACACCTACCTTCAAAGACTTTTATTGTAC | + |
|
Preference number: 1 (lower is better) Translates to: EPRCVPVLLLLLHGT*IPSSHTYLQRLLLY Trigger: GTACAATAAAAGTCTTTGAAGGTAGGTGTGACTACTTGGGATTCAAGTTCCATGAAGCAGAAGCAGGAGGACTGGAACACATCTGGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGTAATATCTTTGGATCACTTGCTGTCTTGTaGAAATTTAACAGAATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PTGWSRDRIFESLCNIFGSLAVL*KFNRMG Trigger: ACCCATTCTGTTAAATTTCCACAAGACAGCAAGTGA...TCCAAAGATATTACATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| 3UTR GCA 72 bp | AAAATGAGCCCAGATGTGTTCCAGTCCTCCTGCTTCTaGTTCATGGAACTTGAATCCCAAGTAGTCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: KMSPDVFQSSCF*FMELESQVVTP Trigger: AGGTGTGACTACTTGGGATTCAAGTTCCATGAAGCAGAAGCAGGAGGACTGGAACACATCTGGGCTCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| 3UTR TCA 72 bp | TGTGTTCCAGTCCTCCTGCTTCTGCTTCATGGAACTTaGATCCCAAGTAGTCACACCTACCTTCAAAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: CVPVLLLLLHGT*IPSSHTYLQRL Trigger: AAGTCTTTGAAGGTAGGTGTGACTACTTGGGATTCAAGTTCCATGAAGCAGAAGCAGGAGGACTGGAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTAATGGGATTGGCTTTTATGGTGATAGTGAGGGGACATGAGCAATTCTTTTTTATTATTGGACTGTaGTGGAAGATCTTGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: PVMGLAFMVIVRGHEQFFFIIGL*WKILEL Trigger: CAGTTCCAAGATCTTCCACAACAGTCCAATAATAAA...AAAGAATTGCTCATGTCCCCTCACTATCACCATAAAAGCCAATCCCATTACAGG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTGCTGTACCTCCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATTGTTCACTTGCTGTCTaGTGGAAATTTAACAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: VLLYLPQVGVEIGFSNLYCSLAV*WKFNRM Trigger: CATTCTGTTAAATTTCCACAAGACAGCAAGTGAACA...ATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGGAGGTACAGCAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTAATGGGATTGGCTTTTATGGTGATAGTGAGGGGACATGAGCAATTCTTTTGGAAGGCGGAAGACTaGTTGGAGAATCCGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PVMGLAFMVIVRGHEQFFWKAED*LENPDV Trigger: TACATCCGGATTCTCCAAGCAGTCTTCCGCCTTCCA...AAAGAATTGCTCATGTCCCCTCACTATCACCATAAAAGCCAATCCCATTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCTGTACCTCCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATCAACTCTTCCAGCCCTaGGATCCCTATCAGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLYLPQVGVEIGFSNLYQLFQP*DPYQEE Trigger: TTCCTCCTGATAGGGATCCCAGGGCTGGAAGAGTTG...ATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGGAGGTACAGCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTGCTGTACCTCCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGCGGTGTGTCATGAATaGGAAGAGAGCTGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLLYLPQVGVEIGFSNLYAVCHE*EESWKV Trigger: TACCTTCCAGCTCTCTTCTCATTCATGACACACCGC...ATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGGAGGTACAGCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR GCA 90 bp | CCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGTAATATCTTTGGATGGGTTGGTGGAGGCTaGGTTCAGTTTGGATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PTGWSRDRIFESLCNIFGWVGGG*VQFGSQ Trigger: TTGTGATCCAAACTGAACGCAGCCTCCACCAACCCA...TCCAAAGATATTACATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGCAATTCTTTTCCTCAGAATTTATTGTTCACTTGCTGTCTTGTGGAAATGCCCAAATCAGTGCATaGCAACATGGCCAAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HEQFFSSEFIVHLLSCGNAQISA*QHGQEV Trigger: TACTTCTTGGCCATGTTGGCATGCACTGATTTGGGC...ATTTCCACAAGACAGCAAGTGAACAATAAATTCTGAGGAAAAGAATTGCTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR TCA 90 bp | CCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGTAATATCTTTGGAATCAATGTATCCCACTaGGAAAGCGACCAATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: PTGWSRDRIFESLCNIFGINVSH*ESDQSI Trigger: TATGGATTGGTCGCTTTCTCAGTGGGATACATTGAT...TCCAAAGATATTACATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGCAATTCTTTTCCTCAGAATTTATTGTTCACTTGCTGTCTTGTGGAAATGATGCAGGCTCCAAATaGAATCTCCCTGAGATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HEQFFSSEFIVHLLSCGNDAGSK*NLPEIE Trigger: TTCAATCTCAGGGAGATTGCATTTGGAGCCTGCATC...ATTTCCACAAGACAGCAAGTGAACAATAAATTCTGAGGAAAAGAATTGCTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR GCA 90 bp | CCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGTAATATCTTTGGAAGCTGGAAGGTAAAATaGCAACATGACACTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: PTGWSRDRIFESLCNIFGSWKVK*QHDTDM Trigger: CATGTCAGTGTCATGTTGGCATTTTACCTTCCAGCT...TCCAAAGATATTACATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CCA 90 bp | CCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGTAATATCTTTGGATTCACAGTAGGTATGTaGAATAATCCGGACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PTGWSRDRIFESLCNIFGFTVGM*NNPDTT Trigger: TGTGGTGTCCGGATTATTCCACATACCTACTGTGAA...TCCAAAGATATTACATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR TCA 90 bp | CCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGTAATATCTTTGGATTATATACATCTGAGTaGTGCAGGCTCCAAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTGWSRDRIFESLCNIFGLYTSE*CRLQMQ Trigger: TTGCATTTGGAGCCTGCATCACTCAGATGTATATAA...TCCAAAGATATTACATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGCAATTCTTTTCCTCAGAATTTATTGTTCACTTGCTGTCTTGTGGAAATCAGACTCCAGGCCAGTaGATGTATGGATTATATACA | + |
|
Preference number: 4 (lower is better) Translates to: HEQFFSSEFIVHLLSCGNQTPGQ*MYGLYT Trigger: TGTATATAATCCATACATGCACTGGCCTGGAGTCTG...ATTTCCACAAGACAGCAAGTGAACAATAAATTCTGAGGAAAAGAATTGCTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR TCA 90 bp | CATGAGCAATTCTTTTCCTCAGAATTTATTGTTCACTTGCTGTCTTGTGGAAATTGGATTATATACATCTaGGTGATGCAGGCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HEQFFSSEFIVHLLSCGNWIIYI*VMQAPN Trigger: ATTTGGAGCCTGCATCACTCAGATGTATATAATCCA...ATTTCCACAAGACAGCAAGTGAACAATAAATTCTGAGGAAAAGAATTGCTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGCAATTCTTTTCCTCAGAATTTATTGTTCACTTGCTGTCTTGTGGAAATAGGCTGCGTTCAGTTTaGATCACAAATAAGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HEQFFSSEFIVHLLSCGNRLRSV*ITNKMM Trigger: CATCATCTTATTTGTGATCCAAACTGAACGCAGCCT...ATTTCCACAAGACAGCAAGTGAACAATAAATTCTGAGGAAAAGAATTGCTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGCAATTCTTTTCCTCAGAATTTATTGTTCACTTGCTGTCTTGTGGAAATCATACTGTACCTCAGTaGGTAACATATAGCAATATA | + |
|
Preference number: 4 (lower is better) Translates to: HEQFFSSEFIVHLLSCGNHTVPQ*VTYSNI Trigger: TATATTGCTATATGTTACCCACTGAGGTACAGTATG...ATTTCCACAAGACAGCAAGTGAACAATAAATTCTGAGGAAAAGAATTGCTCATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTAATGGGATTGGCTTTTATGGTGATAGTGAGGGGACATGAGCAATTCTTTAAGGCGGAAGACTGCTaGGAGAATCCGGATGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVMGLAFMVIVRGHEQFFKAEDC*ENPDVG Trigger: TCCTACATCCGGATTCTCCAAGCAGTCTTCCGCCTT...AAAGAATTGCTCATGTCCCCTCACTATCACCATAAAAGCCAATCCCATTACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTGCTGTACCTCCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATTGGCACATGCTAGCTTaGCCAAACCCATGTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLLYLPQVGVEIGFSNLYWHMLA*PNPCVH Trigger: GTGAACACATGGGTTTGGCAAAGCTAGCATGTGCCA...ATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGGAGGTACAGCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTAATGGGATTGGCTTTTATGGTGATAGTGAGGGGACATGAGCAATTCTTTACAACCACATATAGGTaGGCTAGAAGTATGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PVMGLAFMVIVRGHEQFFTTTYR*ARSMWM Trigger: CATCCACATACTTCTAGCCAACCTATATGTGGTTGT...AAAGAATTGCTCATGTCCCCTCACTATCACCATAAAAGCCAATCCCATTACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CAA 90 bp | CCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGTAATATCTTTGGAAAAATACCCAGCATCTaGGGGATAGTAGCTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PTGWSRDRIFESLCNIFGKIPSI*GIVAVD Trigger: ATCCACAGCTACTATCCCCAAGATGCTGGGTATTTT...TCCAAAGATATTACATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTAATGGGATTGGCTTTTATGGTGATAGTGAGGGGACATGAGCAATTCTTTATAGCTATCACTTTGTaGGTGAGTATCATACTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PVMGLAFMVIVRGHEQFFIAITL*VSIILY Trigger: GTACAGTATGATACTCACCAACAAAGTGATAGCTAT...AAAGAATTGCTCATGTCCCCTCACTATCACCATAAAAGCCAATCCCATTACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CAA 90 bp | CCCACAGGTTGGAGTAGAGATAGGATTTTCGAATCTTTATGTAATATCTTTGGAACATTGACCTTGATATaGGCACATGCTAGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTGWSRDRIFESLCNIFGTLTLI*AHASFA Trigger: GGCAAAGCTAGCATGTGCCAATATCAAGGTCAATGT...TCCAAAGATATTACATAAAGATTCGAAAATCCTATCTCTACTCCAACCTGTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS-3UTR CAA 90 bp | CATGAGCAATTCTTTTCCTCAGAATTTATTGTTCACTTGCTGTCTTGTGGAAATAGAATAGCTATCACTTaGTTGGTGAGTATCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: HEQFFSSEFIVHLLSCGNRIAIT*LVSIIL Trigger: CAGTATGATACTCACCAACAAAGTGATAGCTATTCT...ATTTCCACAAGACAGCAAGTGAACAATAAATTCTGAGGAAAAGAATTGCTCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213622.2 |
||
| CDS TCA 72 bp | GGAAAATCCAATCACAGACAGATCAATGTATCCCACTaGGAAAGCGACCAATCCATAAATAACATTGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: GKSNHRQINVSH*ESDQSINNIDL Trigger: AAGGTCAATGTTATTTATGGATTGGTCGCTTTCTCAGTGGGATACATTGATCTGTCTGTGATTGGATTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098160.2 ENSMUST00000213622.2 |
||