Pregenerated sensors for OLFR676 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073915Ensembl transcript IDs: ENSMUST00000219602.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATaGCCTAGTATAGGGGAATGCCAGGGCCAGGAATGGGAGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: QSSMGGEALGPVKAL*PSIGECQGQEWEWV Trigger: CACCCACTCCCATTCCTGGCCCTGGCATTCCCCTATACTAGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR CCA 90 bp | ACACATGGTGGAACTTGTGGCTCTAGCTATATATGTAGCAGAGGATaGCTTAGTCAGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: THGGTCGSSYICSRG*LSQSSMGGEALGPV Trigger: CACAGGACCAAGGGCCTCTCCTCCCATTGATGACTGACTAAGCCATCCTCTGCTACATATATAGCTAGAGCCACAAGTTCCACCATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR GCA 90 bp | GCTGATAGGAGCCTGATAAAGCTGTTTCCTGCAAGGCTCTGCCAGTaGCTGGAAAATACAGAAGTGGATGCTCACAGTGATCCATTGGAT | + |
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Preference number: 1 (lower is better) Translates to: ADRSLIKLFPARLCQ*LENTEVDAHSDPLD Trigger: ATCCAATGGATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAGGAAACAGCTTTATCAGGCTCCTATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR CCA 90 bp | TCCATATATATTTGCCTATTTTGCACCTTCTCTTTGCTGGTTACCTaGTTTGATAAGGCTCCCTTTTGTGTAGTGTTACTTCCTTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: SIYICLFCTFSLLVT*FDKAPFCVVLLPCG Trigger: TCCACAAGGAAGTAACACTACACAAAAGGGAGCCTTATCAAACCAGGTAACCAGCAAAGAGAAGGTGCAAAATAGGCAAATATATATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR GCA 90 bp | GCTTCATATTTATCTGATATTACCACTACTGTTTCTGCTTTGTTTTaGCTCTCTCCATATATATTTGCCTATTTTGCACCTTCTCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ASYLSDITTTVSALF*LSPYIFAYFAPSLC Trigger: GCAAAGAGAAGGTGCAAAATAGGCAAATATATATGGAGAGAGGCAAAACAAAGCAGAAACAGTAGTGGTAATATCAGATAAATATGAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAAGGCTCTGCCAGTGCCTGGAAAATACAGAAGTGGATGCTCACAGTGATCCCTGTGAAGGCTCTATaGCCTAGTATAGGGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: LQGSASAWKIQKWMLTVIPVKAL*PSIGEC Trigger: GCATTCCCCTATACTAGGGCATAGAGCCTTCACAGG...GATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR TCA 90 bp | CATTGGATGGTGCACAAGGTCCCCAATGAAGGAGCCAGAGAAATACCCAGAGAGAAGAAGCCAGGAATTTaGAAGCAGAAGGCTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: HWMVHKVPNEGAREIPREKKPGI*KQKAPL Trigger: TAGAGGAGCCTTCTGCTTTCAAATTCCTGGCTTCTT...CTCTCTGGGTATTTCTCTGGCTCCTTCATTGGGGACCTTGTGCACCATCCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCAAGGCTCTGCCAGTGCCTGGAAAATACAGAAGTGGATGCTCACAGTGATCTGTAGAGCTGCTTTCTaGTCCACTGTTACATTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LQGSASAWKIQKWMLTVICRAAF*STVTLF Trigger: AAACAATGTAACAGTGGATCAGAAAGCAGCTCTACA...GATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGGATGGTGCACAAGGTCCCCAATGAAGGAGCCAGAGAAATACCCAGAGAGCCAGAGCTCCTTGGAATaGTACAACCAATCAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: IGWCTRSPMKEPEKYPESQSSLE*YNQSKK Trigger: TTTCTTTGATTGGTTGTATCATTCCAAGGAGCTCTG...GCTCTCTGGGTATTTCTCTGGCTCCTTCATTGGGGACCTTGTGCACCATCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCATATTCAGAAATCACACTGGAAAATGTACAATCTGGGTTTATCCATGGTAAGGAATGGGAGTGGGTaGGCTGGGGAGCAGGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: VHIQKSHWKMYNLGLSMVRNGSG*AGEQEY Trigger: ATACTCCTGCTCCCCAGCCCACCCACTCCCATTCCT...TACCATGGATAAACCCAGATTGTACATTTTCCAGTGTGATTTCTGAATATGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCATATTCAGAAATCACACTGGAAAATGTACAATCTGGGTTTATCCATGGTAAGGCCCTTGGTCCTGTaGAGGCTCTATGCCCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: VHIQKSHWKMYNLGLSMVRPLVL*RLYALV Trigger: TACTAGGGCATAGAGCCTTCACAGGACCAAGGGCCT...TACCATGGATAAACCCAGATTGTACATTTTCCAGTGTGATTTCTGAATATGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAAGGCTCTGCCAGTGCCTGGAAAATACAGAAGTGGATGCTCACAGTGATCCTCTCCATATATATTTaGCTATTTTGCACCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LQGSASAWKIQKWMLTVILSIYI*LFCTFS Trigger: AGAGAAGGTGCAAAATAGGCAAATATATATGGAGAG...GATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAAGGCTCTGCCAGTGCCTGGAAAATACAGAAGTGGATGCTCACAGTGATCGTTAAGCCTTCCTTATaGTTAAGCTTCTTATACACA | + |
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Preference number: 2 (lower is better) Translates to: LQGSASAWKIQKWMLTVIVKPSL*LSFLYT Trigger: TGTGTATAAGAAGCTTAACCATAAGGAAGGCTTAAC...GATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAAATTAGGAGAGGGCAAGTGTGCATATTCAGAAATCACACTGGAAAATGTAAAGCCCAGTCACTATTaGAGATGCCAACAAGATTTT | + |
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Preference number: 2 (lower is better) Translates to: MKLGEGKCAYSEITLENVKPSHY*RCQQDF Trigger: AAAATCTTGTTGGCATCTGCAATAGTGACTGGGCTT...TACATTTTCCAGTGTGATTTCTGAATATGCACACTTGCCCTCTCCTAATTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTAGGAGAGGGCAAGTGTGCATATTCAGAAATCACACTGGAAAATGTATGGAAAATACAGAAGTaGATGCTCACAGTGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: MKLGEGKCAYSEITLENVWKIQK*MLTVIH Trigger: ATGGATCACTGTGAGCATCCACTTCTGTATTTTCCA...TACATTTTCCAGTGTGATTTCTGAATATGCACACTTGCCCTCTCCTAATTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR GCA 90 bp | AATCAAAGAAAACACATGGTGGAACTTGTGGCTCTAGCTATATATGTAGCAGAGTATATTTGCCTATTTTaGACCTTCTCTTTGCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: NQRKHMVELVALAIYVAEYICLF*TFSLLV Trigger: AACCAGCAAAGAGAAGGTGCAAAATAGGCAAATATA...CTCTGCTACATATATAGCTAGAGCCACAAGTTCCACCATGTGTTTTCTTTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAAATTAGGAGAGGGCAAGTGTGCATATTCAGAAATCACACTGGAAAATGTAAGTCACTATTGCAGATaGCAACAAGATTTTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: MKLGEGKCAYSEITLENVSHYCR*QQDFAD Trigger: ATCAGCAAAATCTTGTTGGCATCTGCAATAGTGACT...TACATTTTCCAGTGTGATTTCTGAATATGCACACTTGCCCTCTCCTAATTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR GCA 72 bp | ATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATaGCCTAGTATAGGGGAATGCCAGGGCCAGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: MGGEALGPVKAL*PSIGECQGQEW Trigger: CCATTCCTGGCCCTGGCATTCCCCTATACTAGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR TCA 72 bp | CACAGTGATCCATTGGATGGTGCACAAGGTCCCCAATaGAGGAGCCAGAGAAATACCCAGAGAGCTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: HSDPLDGAQGPQ*RSQRNTQRAEG Trigger: TCCTTCAGCTCTCTGGGTATTTCTCTGGCTCCTTCATTGGGGACCTTGTGCACCATCCAATGGATCACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR CCA 72 bp | CTGCAAGGCTCTGCCAGTGCCTGGAAAATACAGAAGTaGATGCTCACAGTGATCCATTGGATGGTGCACAAG | + |
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Preference number: 3 (lower is better) Translates to: LQGSASAWKIQK*MLTVIHWMVHK Trigger: CTTGTGCACCATCCAATGGATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR TCA 72 bp | CCAGTGCCTGGAAAATACAGAAGTGGATGCTCACAGTaGTCCATTGGATGGTGCACAAGGTCCCCAATGAAG | + |
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Preference number: 3 (lower is better) Translates to: PVPGKYRSGCSQ*SIGWCTRSPMK Trigger: CTTCATTGGGGACCTTGTGCACCATCCAATGGATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR GCA 72 bp | GATAGGAGCCTGATAAAGCTGTTTCCTGCAAGGCTCTaGCAGTGCCTGGAAAATACAGAAGTGGATGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: DRSLIKLFPARL*QCLENTEVDAH Trigger: GTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAGGAAACAGCTTTATCAGGCTCCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR TCA 72 bp | TCCCCAATGAAGGAGCCAGAGAAATACCCAGAGAGCTaGAGGAGACTGAAGCCCCATAGAAGGAACATCAAT | + |
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Preference number: 3 (lower is better) Translates to: SPMKEPEKYPES*RRLKPHRRNIN Trigger: ATTGATGTTCCTTCTATGGGGCTTCAGTCTCCTTCAGCTCTCTGGGTATTTCTCTGGCTCCTTCATTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR GCA 72 bp | AGCCTGATAAAGCTGTTTCCTGCAAGGCTCTGCCAGTaGCTGGAAAATACAGAAGTGGATGCTCACAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: SLIKLFPARLCQ*LENTEVDAHSD Trigger: ATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAGGAAACAGCTTTATCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR GCA 72 bp | AACGACCATCCAGAGACTGCCCCACTTGATGATCCATaGCATAAACAACAACCAAGCCCAGTCACTATTGCA | + |
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Preference number: 3 (lower is better) Translates to: NDHPETAPLDDP*HKQQPSPVTIA Trigger: TGCAATAGTGACTGGGCTTGGTTGTTGTTTATGGCATGGATCATCAAGTGGGGCAGTCTCTGGATGGTCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR CCA 72 bp | GGAACTTGTGGCTCTAGCTATATATGTAGCAGAGGATaGCTTAGTCAGTCATCAATGGGAGGAGAGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GTCGSSYICSRG*LSQSSMGGEAL Trigger: AAGGGCCTCTCCTCCCATTGATGACTGACTAAGCCATCCTCTGCTACATATATAGCTAGAGCCACAAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR CCA 72 bp | TGGAAAATACAGAAGTGGATGCTCACAGTGATCCATTaGATGGTGCACAAGGTCCCCAATGAAGGAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: WKIQKWMLTVIH*MVHKVPNEGAR Trigger: TCTGGCTCCTTCATTGGGGACCTTGTGCACCATCCAATGGATCACTGTGAGCATCCACTTCTGTATTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGGATGGTGCACAAGGTCCCCAATGAAGGAGCCAGAGAAATACCCAGAGAGCTTTTGCACCTTCTCTTaGCTGGTTACCTGGTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: IGWCTRSPMKEPEKYPESFCTFS*LVTWFD Trigger: ATCAAACCAGGTAACCAGCAAAGAGAAGGTGCAAAA...GCTCTCTGGGTATTTCTCTGGCTCCTTCATTGGGGACCTTGTGCACCATCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR CAA 90 bp | TATATATGTAGCAGAGGATGGCTTAGTCAGTCATCAATGGGAGGAGAGGCCCTTGAAGAAGCCAGGAATTaGAAAGCAGAAGGCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: YICSRGWLSQSSMGGEALEEARN*KAEGSS Trigger: AGAGGAGCCTTCTGCTTTCAAATTCCTGGCTTCTTC...AAGGGCCTCTCCTCCCATTGATGACTGACTAAGCCATCCTCTGCTACATATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCAAGGCTCTGCCAGTGCCTGGAAAATACAGAAGTGGATGCTCACAGTGATCTCTCTCCATATATATTaGCCTATTTTGCACCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: LQGSASAWKIQKWMLTVISLHIY*PILHLL Trigger: GAGAAGGTGCAAAATAGGCAAATATATATGGAGAGA...GATCACTGTGAGCATCCACTTCTGTATTTTCCAGGCACTGGCAGAGCCTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR CAA 90 bp | AATCAAAGAAAACACATGGTGGAACTTGTGGCTCTAGCTATATATGTAGCAGAGAGAGGATGGGGAGTTTaGGAGGGGAAACTAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: NQRKHMVELVALAIYVAERGWGV*EGKLGK Trigger: CTTTCCTAGTTTCCCCTCCAAAACTCCCCATCCTCT...CTCTGCTACATATATAGCTAGAGCCACAAGTTCCACCATGTGTTTTCTTTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR GCA 72 bp | TCTCCATATATATTTGCCTATTTTGCACCTTCTCTTTaGTGGTTACCTGGTTTGATAAGGCTCCCTTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: SPYIFAYFAPSL*WLPGLIRLPFV Trigger: CACAAAAGGGAGCCTTATCAAACCAGGTAACCAGCAAAGAGAAGGTGCAAAATAGGCAAATATATATGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCATATTCAGAAATCACACTGGAAAATGTACAATCTGGGTTTATCCATGGTACGCAAGAGTGAAGATTaGGACTTTGTCATTGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: VHIQKSHWKMYNLGLSMVRKSED*DFVIVY Trigger: ATAAACAATGACAAAGTCCAAATCTTCACTCTTGCG...TACCATGGATAAACCCAGATTGTACATTTTCCAGTGTGATTTCTGAATATGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| CDS-3UTR TCA 90 bp | TGTGAAGCCTCCTGTATCATAAATATTGTAATCACTACAAGAAGGGCATCATCTACAGCTCCTGGAGGCTaGACCAGAAGATGCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: CEASCIINIVITTRRASSTAPGG*TRRCPT Trigger: TGTTGGGCATCTTCTGGTTCAGCCTCCAGGAGCTGT...AGATGATGCCCTTCTTGTAGTGATTACAATATTTATGATACAGGAGGCTTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| CDS-3UTR CCA 90 bp | GCCCCCAGAGCTCCTTGGAATGATACAACCAATCAAAGAAAACACATGGTGGAACCAGAAAGTAGAACATaGGTTGATGAAAGGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: APRAPWNDTTNQRKHMVEPESRT*VDERSC Trigger: ACAGGACCTTTCATCAACCCATGTTCTACTTTCTGG...TTCCACCATGTGTTTTCTTTGATTGGTTGTATCATTCCAAGGAGCTCTGGGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| CDS-3UTR TCA 90 bp | AATCAAAGAAAACACATGGTGGAACTTGTGGCTCTAGCTATATATGTAGCAGAGAGTAGATATTGGCTCTaGTGCTGGCACAGGCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: NQRKHMVELVALAIYVAESRYWL*CWHRLV Trigger: GACTAGCCTGTGCCAGCATCAGAGCCAATATCTACT...CTCTGCTACATATATAGCTAGAGCCACAAGTTCCACCATGTGTTTTCTTTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR CAA 72 bp | CAGAAGGCTCCTCTAGTAGTTCGCAAGAGTGAAGATTaGGACTTTGTCATTGTTTATTCCTCAGAATGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QKAPLVVRKSED*DFVIVYSSECR Trigger: TCTACATTCTGAGGAATAAACAATGACAAAGTCCAAATCTTCACTCTTGCGAACTACTAGAGGAGCCTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| 3UTR CAA 72 bp | CTCTCCATATATATTTGCCTATTTTGCACCTTCTCTTaGCTGGTTACCTGGTTTGATAAGGCTCCCTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LSIYICLFCTFS*LVTWFDKAPFC Trigger: ACAAAAGGGAGCCTTATCAAACCAGGTAACCAGCAAAGAGAAGGTGCAAAATAGGCAAATATATATGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAGCCTCCTGTATCATAAATATTGTAATCACTACAAGAAGGGCATCATCTGGAGGAGAAAAATTATaGGGACAATCATACACAGGC | + |
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Preference number: 4 (lower is better) Translates to: CEASCIINIVITTRRASSGGEKL*GQSYTG Trigger: GCCTGTGTATGATTGTCCCCATAATTTTTCTCCTCC...AGATGATGCCCTTCTTGTAGTGATTACAATATTTATGATACAGGAGGCTTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| CDS-3UTR CCA 90 bp | TATATTTGCCTATTTTGCACCTTCTCTTTGCTGGTTACCTGGTTTGATAAGGCTCTCACAGTAGGTATGTaGGATAATTCTATGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: YICLFCTFSLLVTWFDKALTVGM*DNSMST Trigger: TGTGGACATAGAATTATCCCACATACCTACTGTGAG...AGCCTTATCAAACCAGGTAACCAGCAAAGAGAAGGTGCAAAATAGGCAAATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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| CDS-3UTR CAA 90 bp | TTTGATAAGGCTCCCTTTTGTGTAGTGTTACTTCCTTGTGGACTGAGAGCCTGTAAAGTAGAACATGGGTaGATGAAAGGTCCTGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: FDKAPFCVVLLPCGLRACKVEHG*MKGPVS Trigger: ACTGACAGGACCTTTCATCAACCCATGTTCTACTTT...ACAGGCTCTCAGTCCACAAGGAAGTAACACTACACAAAAGGGAGCCTTATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219602.2 |
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