Pregenerated sensors for OLFR672 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051172Ensembl transcript IDs: ENSMUST00000050599.5, ENSMUST00000213942.3
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 72 bp | GCCAAACCAGAATATACCGAGTGCTCTGGGAACAGTTaGTGTAGACAGACCCAAGTCAGTAACAGCCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: AKPEYTECSGNS*CRQTQVSNSQY Trigger: ATACTGGCTGTTACTGACTTGGGTCTGTCTACAGCAACTGTTCCCAGAGCACTCGGTATATTCTGGTTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050599.5 ENSMUST00000213942.3 |
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| CDS CAA 72 bp | AATAGTCCAACTCCAACAATAATGCAGATTGTTCTGTaGGTGAGGATAGTGTTATATCGGAGAGGGTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: NSPTPTIMQIVL*VRIVLYRRGLQ Trigger: CTGTAACCCTCTCCGATATAACACTATCCTCACCAACAGAACAATCTGCATTATTGTTGGAGTTGGACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050599.5 ENSMUST00000213942.3 |
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| CDS CAA 90 bp | AAGCATGAATGTTTCGATGCCTGTAAACAGATGTATGAAAAACATTaGAGCTACACAGTCCCTAAAGGCAATCTTATGGAAGCCAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: KHECFDACKQMYEKH*SYTVPKGNLMEAKP Trigger: TGGTTTGGCTTCCATAAGATTGCCTTTAGGGACTGTGTAGCTCAAATGTTTTTCATACATCTGTTTACAGGCATCGAAACATTCATGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050599.5 ENSMUST00000213942.3 |
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| CDS CAA 72 bp | TGTTTCGATGCCTGTAAACAGATGTATGAAAAACATTaGAGCTACACAGTCCCTAAAGGCAATCTTATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CFDACKQMYEKH*SYTVPKGNLME Trigger: TTCCATAAGATTGCCTTTAGGGACTGTGTAGCTCAAATGTTTTTCATACATCTGTTTACAGGCATCGAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050599.5 ENSMUST00000213942.3 |
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