Pregenerated sensors for OLFR667 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056782Ensembl transcript IDs: ENSMUST00000071362.3, ENSMUST00000217177.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TTATGGGTCAGAGGTGTAAGTGGGATGGCAACCCCATCCCTCACTTaGTGTCCTGTCTTCCTGCTGGAGGTGGGCTCTATAAGTTCCCTC | + |
Preference number: 1 (lower is better) Translates to: LWVRGVSGMATPSLT*CPVFLLEVGSISSL Trigger: GAGGGAACTTATAGAGCCCACCTCCAGCAGGAAGACAGGACATCAAGTGAGGGATGGGGTTGCCATCCCACTTACACCTCTGACCCATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR TCA 90 bp | CCTGGGGCCTCCAGTCTCTTGAGTGTTAGATGCTTCATTTCTGAATaGACACAGACCTGGAAGTCCTCTACTGTATGTGTATTAGGGGCC | + |
Preference number: 1 (lower is better) Translates to: PGASSLLSVRCFISE*TQTWKSSTVCVLGA Trigger: GGCCCCTAATACACATACAGTAGAGGACTTCCAGGTCTGTGTTCATTCAGAAATGAAGCATCTAACACTCAAGAGACTGGAGGCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR GCA 90 bp | GTCCTCTACTGTATGTGTATTAGGGGCCTCATATCAGCTGGTGTATaGTATCTGTTTGGTTGTCCAGTATTTGAAAGAACTCAGGGGTCC | + |
Preference number: 1 (lower is better) Translates to: VLYCMCIRGLISAGV*YLFGCPVFERTQGS Trigger: GGACCCCTGAGTTCTTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCCTAATACACATACAGTAGAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR TCA 90 bp | GACTGCTGGTCCTCCTACAGAATTGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCAAAGGTCCCTCCCTGTaGGTCCTGGGAGTCTTTTAC | + |
Preference number: 2 (lower is better) Translates to: DCWSSYRIALLLGFFQPSKGPSL*VLGVFY Trigger: GTAAAAGACTCCCAGGACTCACAGGGAGGGACCTTT...GGAAGGCTGAAAGAACCCGAGAAGAAGGGCAATTCTGTAGGAGGACCAGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CCA 90 bp | GACTGCTGGTCCTCCTACAGAATTGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCAATAGTGTGAGGCCTTaGAACCTCCCCTTGAGCTGG | + |
Preference number: 2 (lower is better) Translates to: DCWSSYRIALLLGFFQPSNSVRP*NLPLSW Trigger: CCAGCTCAAGGGGAGGTTCCAAGGCCTCACACTATT...GGAAGGCTGAAAGAACCCGAGAAGAAGGGCAATTCTGTAGGAGGACCAGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR CAA 90 bp | ATTATGGGTCAGAGGTGTAAGTGGGATGGCAACCCCATCCCTCACTaGATGTCCTGTCTTCCTGCTGGAGGTGGGCTCTATAAGTTCCCT | + |
Preference number: 2 (lower is better) Translates to: IMGQRCKWDGNPIPH*MSCLPAGGGLYKFP Trigger: AGGGAACTTATAGAGCCCACCTCCAGCAGGAAGACAGGACATCAAGTGAGGGATGGGGTTGCCATCCCACTTACACCTCTGACCCATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CCA 90 bp | GACTGCTGGTCCTCCTACAGAATTGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCGCTGCTTCAGTCCATTaGTTGGGTGCAAATAACTGC | + |
Preference number: 2 (lower is better) Translates to: DCWSSYRIALLLGFFQPSAASVH*LGANNC Trigger: GCAGTTATTTGCACCCAACCAATGGACTGAAGCAGC...GGAAGGCTGAAAGAACCCGAGAAGAAGGGCAATTCTGTAGGAGGACCAGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR TCA 90 bp | TGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCCTAATTCAACAACAGGAGTCAGCCTTTGGGACTGTCACTaGACTTTCTTTTCCTCAGGC | + |
Preference number: 2 (lower is better) Translates to: CPSSRVLSAFPNSTTGVSLWDCH*TFFSSG Trigger: GCCTGAGGAAAAGAAAGTTCAGTGACAGTCCCAAAG...GCTGACTCCTGTTGTTGAATTAGGGAAGGCTGAAAGAACCCGAGAAGAAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CCA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAACCTCCCTGTGAGTCCTaGGAGTCTTTTACCTCCCAG | + |
Preference number: 2 (lower is better) Translates to: GASYQLVYAICLVVQYLKPPCES*ESFTSQ Trigger: CTGGGAGGTAAAAGACTCCCAGGACTCACAGGGAGG...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR TCA 90 bp | TGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCCTAATTCAACAACAGGAGTCAGCGCAAATAACTGCATCTaGCTCTTTCAGCTGCTTGTT | + |
Preference number: 2 (lower is better) Translates to: CPSSRVLSAFPNSTTGVSANNCI*LFQLLV Trigger: AACAAGCAGCTGAAAGAGTCAGATGCAGTTATTTGC...GCTGACTCCTGTTGTTGAATTAGGGAAGGCTGAAAGAACCCGAGAAGAAGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR TCA 90 bp | ATGGCCAACATTTACTCTGAAATCCAATGCTACAGAGTTGGTTTCTCAAAAAGAAACCTCCACCCCACCTaGCCTCTGAATTCCCTGGGG | + |
Preference number: 2 (lower is better) Translates to: MANIYSEIQCYRVGFSKRNLHPT*PLNSLG Trigger: CCCCAGGGAATTCAGAGGTCAGGTGGGGTGGAGGTT...TCTTTTTGAGAAACCAACTCTGTAGCATTGGATTTCAGAGTAAATGTTGGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CCA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAACCCTCTCCCTACTGTTaGGCATTTCATCAAAGGTCC | + |
Preference number: 2 (lower is better) Translates to: GASYQLVYAICLVVQYLKPSPYC*AFHQRS Trigger: GGACCTTTGATGAAATGCCCAACAGTAGGGAGAGGG...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CCA 90 bp | TGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCCTAATTCAACAACAGGAGTCAGCCTTCAGTCCATTGGTTaGGTGCAAATAACTGCATCT | + |
Preference number: 2 (lower is better) Translates to: CPSSRVLSAFPNSTTGVSLQSIG*VQITAS Trigger: AGATGCAGTTATTTGCACCCAACCAATGGACTGAAG...GCTGACTCCTGTTGTTGAATTAGGGAAGGCTGAAAGAACCCGAGAAGAAGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR TCA 90 bp | ATGGCCAACATTTACTCTGAAATCCAATGCTACAGAGTTGGTTTCTCAAAAAGAACCCCATCCCTCACTTaGTGTCCTGTCTTCCTGCTG | + |
Preference number: 2 (lower is better) Translates to: MANIYSEIQCYRVGFSKRTPSLT*CPVFLL Trigger: CAGCAGGAAGACAGGACATCAAGTGAGGGATGGGGT...TCTTTTTGAGAAACCAACTCTGTAGCATTGGATTTCAGAGTAAATGTTGGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR TCA 90 bp | TGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCCTAATTCAACAACAGGAGTCAGCATAGATCCATTTTTGTaGGTATTCCATAGCCTCAGT | + |
Preference number: 2 (lower is better) Translates to: CPSSRVLSAFPNSTTGVSIDPFL*VFHSLS Trigger: ACTGAGGCTATGGAATACTCACAAAAATGGATCTAT...GCTGACTCCTGTTGTTGAATTAGGGAAGGCTGAAAGAACCCGAGAAGAAGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR GCA 90 bp | TGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCCTAATTCAACAACAGGAGTCAGCCCTCTTCAAACACAATaGAACCATGAGGCTATAAAT | + |
Preference number: 2 (lower is better) Translates to: CPSSRVLSAFPNSTTGVSPLQTQ*NHEAIN Trigger: ATTTATAGCCTCATGGTTGCATTGTGTTTGAAGAGG...GCTGACTCCTGTTGTTGAATTAGGGAAGGCTGAAAGAACCCGAGAAGAAGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CCA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAAAGACAGGAACAATTATaGGTCAGAGGTGTAAGTGGG | + |
Preference number: 2 (lower is better) Translates to: GASYQLVYAICLVVQYLKRQEQL*VRGVSG Trigger: CCCACTTACACCTCTGACCCATAATTGTTCCTGTCT...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR CAA 90 bp | ATTGGTTGGGTGCAAATAACTGCATCTGACTCTTTCAGCTGCTTGTaGGGTCTTTCGGAAGGCAATCATGATAGATCCATTTTTGTGAGT | + |
Preference number: 2 (lower is better) Translates to: IGWVQITASDSFSCL*GLSEGNHDRSIFVS Trigger: ACTCACAAAAATGGATCTATCATGATTGCCTTCCGAAAGACCCAACAAGCAGCTGAAAGAGTCAGATGCAGTTATTTGCACCCAACCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR TCA 90 bp | ATGGCCAACATTTACTCTGAAATCCAATGCTACAGAGTTGGTTTCTCAAAAAGATGCTTCATTTCTGAATaGACACAGACCTGGAAGTCC | + |
Preference number: 2 (lower is better) Translates to: MANIYSEIQCYRVGFSKRCFISE*TQTWKS Trigger: GGACTTCCAGGTCTGTGTTCATTCAGAAATGAAGCA...TCTTTTTGAGAAACCAACTCTGTAGCATTGGATTTCAGAGTAAATGTTGGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR GCA 90 bp | ATGGCCAACATTTACTCTGAAATCCAATGCTACAGAGTTGGTTTCTCAAAAAGAATATCAGCTGGTGTATaGTATCTGTTTGGTTGTCCA | + |
Preference number: 2 (lower is better) Translates to: MANIYSEIQCYRVGFSKRISAGV*YLFGCP Trigger: TGGACAACCAAACAGATAGCATACACCAGCTGATAT...TCTTTTTGAGAAACCAACTCTGTAGCATTGGATTTCAGAGTAAATGTTGGCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR TCA 72 bp | AGAGGTGTAAGTGGGATGGCAACCCCATCCCTCACTTaGTGTCCTGTCTTCCTGCTGGAGGTGGGCTCTATA | + |
Preference number: 3 (lower is better) Translates to: RGVSGMATPSLT*CPVFLLEVGSI Trigger: TATAGAGCCCACCTCCAGCAGGAAGACAGGACATCAAGTGAGGGATGGGGTTGCCATCCCACTTACACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR TCA 72 bp | CCTACTGTTGGGCATTTCATCAAAGGTCCCTCCCTGTaGGTCCTGGGAGTCTTTTACCTCCCAGATCTCTGG | + |
Preference number: 3 (lower is better) Translates to: PTVGHFIKGPSL*VLGVFYLPDLW Trigger: CCAGAGATCTGGGAGGTAAAAGACTCCCAGGACTCACAGGGAGGGACCTTTGATGAAATGCCCAACAGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR TCA 72 bp | GCTTCAGTCCATTGGTTGGGTGCAAATAACTGCATCTaGCTCTTTCAGCTGCTTGTTGGGTCTTTCGGAAGG | + |
Preference number: 3 (lower is better) Translates to: ASVHWLGANNCI*LFQLLVGSFGR Trigger: CCTTCCGAAAGACCCAACAAGCAGCTGAAAGAGTCAGATGCAGTTATTTGCACCCAACCAATGGACTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CAA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAAAACCCCATCCCTCACTaGATGTCCTGTCTTCCTGCT | + |
Preference number: 3 (lower is better) Translates to: GASYQLVYAICLVVQYLKNPIPH*MSCLPA Trigger: AGCAGGAAGACAGGACATCAAGTGAGGGATGGGGTT...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CAA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAAGGTCCTCCTACAGAATaGCCCTTCTTCTCGGGTTCT | + |
Preference number: 3 (lower is better) Translates to: GASYQLVYAICLVVQYLKGPPTE*PFFSGS Trigger: AGAACCCGAGAAGAAGGGCAATTCTGTAGGAGGACC...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CAA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAATCCCTCTCCCTACTGTaGGGCATTTCATCAAAGGTC | + |
Preference number: 3 (lower is better) Translates to: GASYQLVYAICLVVQYLKSLSLL*GISSKV Trigger: GACCTTTGATGAAATGCCCAACAGTAGGGAGAGGGA...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR CCA 72 bp | TTCCATCCCTGTAATTCTTTCAGACAGGAACAATTATaGGTCAGAGGTGTAAGTGGGATGGCAACCCCATCC | + |
Preference number: 3 (lower is better) Translates to: FHPCNSFRQEQL*VRGVSGMATPS Trigger: GGATGGGGTTGCCATCCCACTTACACCTCTGACCCATAATTGTTCCTGTCTGAAAGAATTACAGGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR-3UTR CAA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAATCTTTCAGCTGCTTGTaGGGTCTTTCGGAAGGCAAT | + |
Preference number: 3 (lower is better) Translates to: GASYQLVYAICLVVQYLKSFSCL*GLSEGN Trigger: ATTGCCTTCCGAAAGACCCAACAAGCAGCTGAAAGA...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR GCA 72 bp | TGTATGTGTATTAGGGGCCTCATATCAGCTGGTGTATaGTATCTGTTTGGTTGTCCAGTATTTGAAAGAACT | + |
Preference number: 3 (lower is better) Translates to: CMCIRGLISAGV*YLFGCPVFERT Trigger: AGTTCTTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCCTAATACACATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR CCA 72 bp | TCTACAATGTTTTCTGTGTATTTCGGTCTATTACAATaGACACAACTAGATGAGCTGACACCATTCACCTTA | + |
Preference number: 3 (lower is better) Translates to: STMFSVYFGLLQ*TQLDELTPFTL Trigger: TAAGGTGAATGGTGTCAGCTCATCTAGTTGTGTCCATTGTAATAGACCGAAATACACAGAAAACATTGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR CAA 72 bp | CAGAGGTGTAAGTGGGATGGCAACCCCATCCCTCACTaGATGTCCTGTCTTCCTGCTGGAGGTGGGCTCTAT | + |
Preference number: 4 (lower is better) Translates to: QRCKWDGNPIPH*MSCLPAGGGLY Trigger: ATAGAGCCCACCTCCAGCAGGAAGACAGGACATCAAGTGAGGGATGGGGTTGCCATCCCACTTACACCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR CAA 72 bp | CTGGAGGTGGGCTCTATAAGTTCCCTCTCCCTACTGTaGGGCATTTCATCAAAGGTCCCTCCCTGTGAGTCC | + |
Preference number: 4 (lower is better) Translates to: LEVGSISSLSLL*GISSKVPPCES Trigger: GGACTCACAGGGAGGGACCTTTGATGAAATGCCCAACAGTAGGGAGAGGGAACTTATAGAGCCCACCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR CAA 72 bp | GAGGCCTTGGAACCTCCCCTTGAGCTGGATCCCACTTaGGGACTGTCACTGAACTTTCTTTTCCTCAGGCTC | + |
Preference number: 4 (lower is better) Translates to: EALEPPLELDPT*GLSLNFLFLRL Trigger: GAGCCTGAGGAAAAGAAAGTTCAGTGACAGTCCCAAAGTGGGATCCAGCTCAAGGGGAGGTTCCAAGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR GCA 90 bp | GACTGCTGGTCCTCCTACAGAATTGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCGTGGGGAATAGTATGTaGTCCAAAACGATGAGTGAA | + |
Preference number: 4 (lower is better) Translates to: DCWSSYRIALLLGFFQPSVGNSM*SKTMSE Trigger: TTCACTCATCGTTTTGGAGCACATACTATTCCCCAC...GGAAGGCTGAAAGAACCCGAGAAGAAGGGCAATTCTGTAGGAGGACCAGCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR CCA 90 bp | GACTGCTGGTCCTCCTACAGAATTGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCGACTCCATAAACAATTaGGTTCATGGTAGCAGGCAA | + |
Preference number: 4 (lower is better) Translates to: DCWSSYRIALLLGFFQPSDSINN*VHGSRQ Trigger: TTGCCTGCTACCATGAACCCAATTGTTTATGGAGTC...GGAAGGCTGAAAGAACCCGAGAAGAAGGGCAATTCTGTAGGAGGACCAGCAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR TCA 90 bp | GACTGCTGGTCCTCCTACAGAATTGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCATAAGGTTATATCAGTaGAGGAGAGCAGGGTTAGAA | + |
Preference number: 4 (lower is better) Translates to: DCWSSYRIALLLGFFQPSIRLYQ*RRAGLE Trigger: TTCTAACCCTGCTCTCCTTCACTGATATAACCTTAT...GGAAGGCTGAAAGAACCCGAGAAGAAGGGCAATTCTGTAGGAGGACCAGCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR TCA 90 bp | TGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCCTAATTCAACAACAGGAGTCAGCGACCATAGACTGCATTaGTTTTCACATTGCCACAGG | + |
Preference number: 4 (lower is better) Translates to: CPSSRVLSAFPNSTTGVSDHRLH*FSHCHR Trigger: CCTGTGGCAATGTGAAAATCAATGCAGTCTATGGTC...GCTGACTCCTGTTGTTGAATTAGGGAAGGCTGAAAGAACCCGAGAAGAAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR CCA 90 bp | TGCCCTTCTTCTCGGGTTCTTTCAGCCTTCCCTAATTCAACAACAGGAGTCAGCGTACATGAAACAGAATaGCAGAGAGATCCAGACATG | + |
Preference number: 4 (lower is better) Translates to: CPSSRVLSAFPNSTTGVSVHETE*QRDPDM Trigger: CATGTCTGGATCTCTCTGCCATTCTGTTTCATGTAC...GCTGACTCCTGTTGTTGAATTAGGGAAGGCTGAAAGAACCCGAGAAGAAGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR TCA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAACAGACTCTGTTGCTGTaGAGGTATGCACAAAGAACA | + |
Preference number: 4 (lower is better) Translates to: GASYQLVYAICLVVQYLKQTLLL*RYAQRT Trigger: TGTTCTTTGTGCATACCTTCACAGCAACAGAGTCTG...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR TCA 90 bp | ATGGCCAACATTTACTCTGAAATCCAATGCTACAGAGTTGGTTTCTCAAAAAGAAGTAGGCATGGGGGATaGGGTTTCCTCGGCAATAGG | + |
Preference number: 4 (lower is better) Translates to: MANIYSEIQCYRVGFSKRSRHGG*GFLGNR Trigger: CCTATTGCCGAGGAAACCTCATCCCCCATGCCTACT...TCTTTTTGAGAAACCAACTCTGTAGCATTGGATTTCAGAGTAAATGTTGGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR CCA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAAATGATGTGGATGTGGTaGGGAATAGTATGTGCTCCA | + |
Preference number: 4 (lower is better) Translates to: GASYQLVYAICLVVQYLKMMWMW*GIVCAP Trigger: TGGAGCACATACTATTCCCCACCACATCCACATCAT...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR CCA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAATTTGCCACTATGATGTaGATGTGGTGGGGAATAGTA | + |
Preference number: 4 (lower is better) Translates to: GASYQLVYAICLVVQYLKFATMM*MWWGIV Trigger: TACTATTCCCCACCACATCCACATCATAGTGGCAAA...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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3UTR CAA 72 bp | GTGCAAATAACTGCATCTGACTCTTTCAGCTGCTTGTaGGGTCTTTCGGAAGGCAATCATGATAGATCCATT | + |
Preference number: 4 (lower is better) Translates to: VQITASDSFSCL*GLSEGNHDRSI Trigger: AATGGATCTATCATGATTGCCTTCCGAAAGACCCAACAAGCAGCTGAAAGAGTCAGATGCAGTTATTTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR GCA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAAACAGAATATGTCAAATaGACAAACCACAAGAGCAAC | + |
Preference number: 4 (lower is better) Translates to: GASYQLVYAICLVVQYLKTEYVK*TNHKSN Trigger: GTTGCTCTTGTGGTTTGTGCATTTGACATATTCTGT...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR GCA 90 bp | ATGGCCAACATTTACTCTGAAATCCAATGCTACAGAGTTGGTTTCTCAAAAAGAAGACAGGTTCATCACTaGTCTCAATATCATTGTGTA | + |
Preference number: 4 (lower is better) Translates to: MANIYSEIQCYRVGFSKRRQVHH*SQYHCV Trigger: TACACAATGATATTGAGAGCAGTGATGAACCTGTCT...TCTTTTTGAGAAACCAACTCTGTAGCATTGGATTTCAGAGTAAATGTTGGCCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR CAA 90 bp | GGGGCCTCATATCAGCTGGTGTATGCTATCTGTTTGGTTGTCCAGTATTTGAAAGTAGCAAGACTAGCTTaGGCAATCACAGGGTTGGTC | + |
Preference number: 5 (lower is better) Translates to: GASYQLVYAICLVVQYLKVARLA*AITGLV Trigger: GACCAACCCTGTGATTGCCAAAGCTAGTCTTGCTAC...TTTCAAATACTGGACAACCAAACAGATAGCATACACCAGCTGATATGAGGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS TCA 90 bp | AAGACAGGTTCATCACTGCTCTCAATATCATTGTGTATGACACAGTaGTACAGAATATGTCAAATGCACAAACCACAAGAGCAACCAGCA | + |
Preference number: 5 (lower is better) Translates to: KTGSSLLSISLCMTQ*YRICQMHKPQEQPA Trigger: TGCTGGTTGCTCTTGTGGTTTGTGCATTTGACATATTCTGTATCACTGTGTCATACACAATGATATTGAGAGCAGTGATGAACCTGTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071362.3 ENSMUST00000217177.2 |
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CDS TCA 90 bp | ATCAGCAGAAGACAGGTTCATCACTGCTCTCAATATCATTGTGTATaGCACAGTGATACAGAATATGTCAAATGCACAAACCACAAGAGC | + |
Preference number: 5 (lower is better) Translates to: ISRRQVHHCSQYHCV*HSDTEYVKCTNHKS Trigger: GCTCTTGTGGTTTGTGCATTTGACATATTCTGTATCACTGTGTCATACACAATGATATTGAGAGCAGTGATGAACCTGTCTTCTGCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071362.3 ENSMUST00000217177.2 |
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CDS-3UTR CAA 90 bp | ATGGCCAACATTTACTCTGAAATCCAATGCTACAGAGTTGGTTTCTCAAAAAGAGCATTGATTTTCACATaGCCACAGGATATCTTGGCC | + |
Preference number: 5 (lower is better) Translates to: MANIYSEIQCYRVGFSKRALIFT*PQDILA Trigger: GGCCAAGATATCCTGTGGCAATGTGAAAATCAATGC...TCTTTTTGAGAAACCAACTCTGTAGCATTGGATTTCAGAGTAAATGTTGGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS-3UTR CAA 90 bp | ATGGCCAACATTTACTCTGAAATCCAATGCTACAGAGTTGGTTTCTCAAAAAGAAATATACACAGCATATaGGGTACAGTAGTGGTACAT | + |
Preference number: 5 (lower is better) Translates to: MANIYSEIQCYRVGFSKRNIHSI*GTVVVH Trigger: ATGTACCACTACTGTACCCAATATGCTGTGTATATT...TCTTTTTGAGAAACCAACTCTGTAGCATTGGATTTCAGAGTAAATGTTGGCCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217177.2 |
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CDS CAA 90 bp | TTAAATCCAATCTTCTTGAGGTTGAACCAGAATATACACAGCATATaGGGTACAGTAGTGGTACATAAGGTTATATCAGTGAAGGAGAGC | + |
Preference number: 6 (lower is better) Translates to: LNPIFLRLNQNIHSI*GTVVVHKVISVKES Trigger: GCTCTCCTTCACTGATATAACCTTATGTACCACTACTGTACCCAATATGCTGTGTATATTCTGGTTCAACCTCAAGAAGATTGGATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071362.3 ENSMUST00000217177.2 |
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CDS TCA 72 bp | AGACAGGTTCATCACTGCTCTCAATATCATTGTGTATaGCACAGTGATACAGAATATGTCAAATGCACAAAC | + |
Preference number: 6 (lower is better) Translates to: RQVHHCSQYHCV*HSDTEYVKCTN Trigger: GTTTGTGCATTTGACATATTCTGTATCACTGTGTCATACACAATGATATTGAGAGCAGTGATGAACCTGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071362.3 ENSMUST00000217177.2 |
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CDS CAA 72 bp | ATCTTCTTGAGGTTGAACCAGAATATACACAGCATATaGGGTACAGTAGTGGTACATAAGGTTATATCAGTG | + |
Preference number: 6 (lower is better) Translates to: IFLRLNQNIHSI*GTVVVHKVISV Trigger: CACTGATATAACCTTATGTACCACTACTGTACCCAATATGCTGTGTATATTCTGGTTCAACCTCAAGAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071362.3 ENSMUST00000217177.2 |